prot_P-lacustris_contig101.193.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig101.193.1
Unique Nameprot_P-lacustris_contig101.193.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length380
Homology
BLAST of mRNA_P-lacustris_contig101.193.1 vs. uniprot
Match: D7G1T6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1T6_ECTSI)

HSP 1 Score: 197 bits (502), Expect = 2.330e-53
Identity = 159/410 (38.78%), Postives = 205/410 (50.00%), Query Frame = 0
Query:    1 MFCKPVRRVRPQPIAFTIPPG-SCDMSVDTSVAPTPAGDG---TSAFRLEEDGARQVTTEVATAMAAGAPPNAAVGQECFLTFRSKRSFRMQGSSRGGXXXXERDRTTTLSGRHRSSH----PSAIVSRTSRTKPP--VGPLSFARAERPNVVDECRKKEESYGKQVVRLLTRKGDVLVTITRRRGSVWGDTDPGLRPDWNGTAS----AGSRAATAPQGAKTAKRAPRGGRQKARDGNTPSCDGRQGSEKRGWVGKDW----DVLSKANIAITRQPAA-GIHEPVHRASTLDA--------------PIYREPGRAELPLVFRATAASMVRAAPISKATEVYNRPRQ-VLASETGIVTRPDVDSPAGGVNERRQEAGKTRSNEEVAGIEKILRVTEDMLAKSGRGGWGG 376
            +FCKPVRRV PQ  AF + PG SCDMSVDTS AP P+  G    SAFR +E  AR  T  VA  +++     A  G    L   S+R  R Q  S        R  T T  GRH+S +    P+A   R +R +P   VGP SFARAERP++ DE R+KEESYGK+VVRLLT  GDVLVT+TRRR S WGD +P               AG RAAT        +                   GR  +   GW   D     D L   +    RQP A G+H P  R S+L++              P+YREPG++ELP++FRAT+A +VRA P  +A E     R    A++ G ++ PD +     V        +    EE A I +++R  E ++AKS    +GG
Sbjct:  253 VFCKPVRRVLPQTSAFAVAPGGSCDMSVDTSAAPPPSAAGDDENSAFRSDEPQARPATAGVAATVSSA---TALTGAARDLPLHSRRVSRTQQRSARFGGGVGRPGTKTSPGRHQSGNNLLPPAAAAVRAARARPAAAVGPSSFARAERPHIADEGRRKEESYGKKVVRLLTGDGDVLVTVTRRRASAWGDVEPXXXXXXXXXXXXXXXAGPRAATTID-----RXXXXXXXXXXXXXXXXXAVGRGRNAPGGWKTSDGGSGRDALPSTSAIRKRQPTAPGVHPPATRESSLESRAKGLLPDDLTASPPVYREPGKSELPVIFRATSAPIVRAVPSLRAAERLRWGRAPARANQRGAISSPDGNESRHAVPLEEGGWRQELCEEEAAHISRVVRSAESIVAKSSGRSFGG 654          
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig101.193.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G1T6_ECTSI2.330e-5338.78Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig101contigP-lacustris_contig101:157638..158803 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig101.193.1mRNA_P-lacustris_contig101.193.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig101 157638..162584 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig101.193.1 ID=prot_P-lacustris_contig101.193.1|Name=mRNA_P-lacustris_contig101.193.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=380bp
MFCKPVRRVRPQPIAFTIPPGSCDMSVDTSVAPTPAGDGTSAFRLEEDGA
RQVTTEVATAMAAGAPPNAAVGQECFLTFRSKRSFRMQGSSRGGGGGGER
DRTTTLSGRHRSSHPSAIVSRTSRTKPPVGPLSFARAERPNVVDECRKKE
ESYGKQVVRLLTRKGDVLVTITRRRGSVWGDTDPGLRPDWNGTASAGSRA
ATAPQGAKTAKRAPRGGRQKARDGNTPSCDGRQGSEKRGWVGKDWDVLSK
ANIAITRQPAAGIHEPVHRASTLDAPIYREPGRAELPLVFRATAASMVRA
APISKATEVYNRPRQVLASETGIVTRPDVDSPAGGVNERRQEAGKTRSNE
EVAGIEKILRVTEDMLAKSGRGGWGGGFQ*
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