prot_P-lacustris_contig1009.175.1 (polypeptide) Pleurocladia lacustris SAG_25_93
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Overview
Homology
BLAST of mRNA_P-lacustris_contig1009.175.1 vs. uniprot
Match: D7FV36_ECTSI (Mediator of RNA polymerase II transcription subunit 21 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FV36_ECTSI) HSP 1 Score: 217 bits (553), Expect = 5.700e-70 Identity = 123/152 (80.92%), Postives = 127/152 (83.55%), Query Frame = 0
Query: 1 MDGDKDAVSAMQESVDQLALSMFDSLRLIPFSEEVKGGARGVGVAPQHNMHQQQQPSLRRAVATNAAWDSQVQSLAEGVLKQGRALDGLIDVLPGAELREDQQLEASIARLDREGRLKRAELAKMVEKAEGLVKRVNGSLDQLADHMLGAPR 152
M+ DKDAVSAMQESVDQLALSMFDSLRLIPFSEEVKGGARGV Q Q LRRAV TNAAW VQSLA+GVLKQ RALDGLIDVLPGAELREDQQ+E IARLDREG+LKR ELAKMVEKAE L K VNGSLDQLADHMLGAPR
Sbjct: 21 MEVDKDAVSAMQESVDQLALSMFDSLRLIPFSEEVKGGARGVAPLQQQQPGQPDAAPLRRAVTTNAAWADTVQSLADGVLKQARALDGLIDVLPGAELREDQQME-EIARLDREGKLKRTELAKMVEKAEALSKGVNGSLDQLADHMLGAPR 171
BLAST of mRNA_P-lacustris_contig1009.175.1 vs. uniprot
Match: A0A835Z332_9STRA (Mediator of RNA polymerase II transcription subunit 21 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z332_9STRA) HSP 1 Score: 59.3 bits (142), Expect = 3.810e-8 Identity = 48/149 (32.21%), Postives = 71/149 (47.65%), Query Frame = 0
Query: 4 DKDAVSAMQESVDQLALSMFDSLRLIPFSEEVKGGARGVGVAPQHNMHQQQQPSLRRAVATNAAWDSQVQSLAEGVLKQGRALDGLIDVLPGAELREDQQLEASIARLDREGRLKRAELAKMVEKAEGLVKRVNGSLDQLADHMLGAPR 152
D+D VS MQ+ VDQLAL+MF+S+R +P A V+ + QQQ W V +L+ V+ + RALD +I+ LPG + E QQL+ + L E +L +A + LD L+ +L AP+
Sbjct: 21 DQDQVSVMQDKVDQLALAMFESIRSLPDPAADPSFAPEFVVSAGQSDAQQQH---------GQQWIDAVAALSARVVAEARALDNMIETLPGMDKTEAQQLQ-ELKELGEESAALALQLRGRTAEAAAAADAADKVLDHLSSTLLVAPQ 159
BLAST of mRNA_P-lacustris_contig1009.175.1 vs. uniprot
Match: K3X2M6_GLOUD (Mediator of RNA polymerase II transcription subunit 21 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X2M6_GLOUD) HSP 1 Score: 57.0 bits (136), Expect = 2.330e-7 Identity = 46/143 (32.17%), Postives = 68/143 (47.55%), Query Frame = 0
Query: 6 DAVSAMQESVDQLALSMFDSLRLIPFSEEVKGGARGVGVAPQHNMHQQQQPSLRRAVATNAAWDSQVQSLAEGVLKQGRALDGLIDVLPGAELREDQQLEASIARLDREGRLKRAELAKMVEKAEGLVKRVNGSLDQLADHML 148
D VS +QESVD++ALSMF++LRL+P S +G A ++SLA VL+ + D LID LPG E E +QLE + L + + L ++ E+AE + R SL +++ L
Sbjct: 33 DKVSMLQESVDKMALSMFNALRLLPASTGDEGSKEETAAA--------------------------IRSLANDVLRMVKETDALIDDLPGLEKTESEQLE-ELRHLQIQSEEEAQTLRQVAEEAERWMDRARDSLRVISETRL 148
BLAST of mRNA_P-lacustris_contig1009.175.1 vs. uniprot
Match: A0A5D6YEG9_9STRA (Mediator of RNA polymerase II transcription subunit 21 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YEG9_9STRA) HSP 1 Score: 54.3 bits (129), Expect = 2.010e-6 Identity = 49/143 (34.27%), Postives = 71/143 (49.65%), Query Frame = 0
Query: 6 DAVSAMQESVDQLALSMFDSLRLIPFSEEVKGGARGVGVAPQHNMHQQQQPSLRRAVATNAAWDSQVQSLAEGVLKQGRALDGLIDVLPGAELREDQQLEASIARLDREGRLKRAELAKMVEKAEGLVKRVNGSLDQLADHML 148
D VS +QESVD++ALSMF++LRL+P VG S RA A ++SLA+ VL+ + D LID LPG + E QLE + RL E + L ++ ++AE + R SL +++ L
Sbjct: 26 DKVSLLQESVDKMALSMFNALRLLP-----------VG-------------SGDRAETATA-----IRSLADDVLRMVKETDALIDDLPGLDKTESDQLE-ELRRLQIESEEEAQTLRQVADEAERWMDRARDSLRVISETRL 138 The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig1009.175.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 4
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_P-lacustris_contig1009.175.1 ID=prot_P-lacustris_contig1009.175.1|Name=mRNA_P-lacustris_contig1009.175.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=153bpback to top |