prot_P-lacustris_contig1002.133.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig1002.133.1
Unique Nameprot_P-lacustris_contig1002.133.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length190
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig1002.133.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 156..189
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 134..155
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 92..114
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 115..133
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..91
NoneNo IPR availableTMHMMTMhelixcoord: 92..114
NoneNo IPR availableTMHMMTMhelixcoord: 134..156

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig1002contigP-lacustris_contig1002:56101..56670 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig1002.133.1mRNA_P-lacustris_contig1002.133.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig1002 56003..56962 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig1002.133.1 ID=prot_P-lacustris_contig1002.133.1|Name=mRNA_P-lacustris_contig1002.133.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=190bp
MKNRELPIKPILMEDTATHRKQQRFRRVLSRPAGCWPVFRVFPRLYASSS
IYSFHLVKGLALIGKKKETVQSGAISVVRTRKINAPPPADRAYLYPSCSI
ICSLAGFGLVATTTDLLTHLPRLCLPWWCGCNPFLAFIVVVEIMPSLIRL
IVWLAGATRIPSCMHVKTRTNSLNQNTRDFPVYKPFQQT*
back to top