prot_P-lacustris_contig1002.130.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig1002.130.1
Unique Nameprot_P-lacustris_contig1002.130.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length403
Homology
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BLAST of mRNA_P-lacustris_contig1002.130.1 vs. uniprot
Match: D8LLY3_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLY3_ECTSI)

HSP 1 Score: 125 bits (313), Expect = 2.660e-27
Identity = 100/191 (52.36%), Postives = 109/191 (57.07%), Query Frame = 0 
Query:    1 MTERDAVRLASTLRARPVDSPLEEVEVAMNGLSFKAAEAVRLAVESPAVPIERGSS--DDFEARSRRGRRRRRPGG----RDPAAFAGAGEHQPKPQSRGEATRAAAAGERDAR-AEVR-------------------------GSGRELDVEVFGKRVRFERSGA--PSPR---SPPPPPAMEESDPWSE 154
            +TERDA RLA+ LRARPVDSPLEEVEV +NGLS KAAEA+RLAVESP  P +R SS  DD E    RGR            DPAA    G  +P  +SR     AA A ER AR AEV                          GSGRELDVEVFGKRVRFER+G   PSPR   SP P  A  E DPWS+
Sbjct:  548 LTERDAARLAAALRARPVDSPLEEVEVGLNGLSVKAAEAIRLAVESPTAPHDRSSSFVDDLEKNGGRGRXXXXXXXXXXRHDPAA---PGVDEPGLRSRRGTATAAPAEERSARGAEVGEYVPPGGSVELGLFGKKFASFQQAGGSGRELDVEVFGKRVRFERTGGSPPSPRPGSSPXPSMATAEPDPWSD 735
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig1002.130.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LLY3_ECTSI2.660e-2752.36Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig1002contigP-lacustris_contig1002:31437..33856 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig1002.130.1mRNA_P-lacustris_contig1002.130.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig1002 30925..34211 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig1002.130.1 ID=prot_P-lacustris_contig1002.130.1|Name=mRNA_P-lacustris_contig1002.130.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=403bp
MTERDAVRLASTLRARPVDSPLEEVEVAMNGLSFKAAEAVRLAVESPAVP
IERGSSDDFEARSRRGRRRRRPGGRDPAAFAGAGEHQPKPQSRGEATRAA
AAGERDARAEVRGSGRELDVEVFGKRVRFERSGAPSPRSPPPPPAMEESD
PWSEDDGVEFGDVSTAATHGSAFSSSSEDDDGAADTHLDKEGKMPAVTVE
ATRGPWSSAAVTLRIAAARIQKIGVIKPAMVTTATSRNDAPRGAPPLLGK
SPADGPRRRREFPLCAVVVVAAACRRSKALADNGGRCGSKEKSGTATTGY
CAGGSKRCPKKQKRTAKAWRHQPRSSGRQASKSNPRRQATGLQIKTGTAA
NGLEGPTRFGPNKQAKMRTLAEPQHQPRWSGTQASAILNLAVISARTETP
RG*
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