prot_P-lacustris_contig1000.119.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig1000.119.1
Unique Nameprot_P-lacustris_contig1000.119.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length107
Homology
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BLAST of mRNA_P-lacustris_contig1000.119.1 vs. uniprot
Match: A0A6H5JYK1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYK1_9PHAE)

HSP 1 Score: 123 bits (308), Expect = 4.110e-32
Identity = 59/77 (76.62%), Postives = 61/77 (79.22%), Query Frame = 0 
Query:   31 LFPFITKGAVGNANTGGSTHKEVKKSAASASGRDNPVHMFRAWNDNHGLKALCDGVRWRVRGREDGVEVEKELTAGP 107
             F F TKGAVGNAN G S HKEVKKSA SASGRDNPVH+FR WND   LKALCDGVRW  +GR  GVEV KELTAGP
Sbjct:   24 FFFFRTKGAVGNANFGESKHKEVKKSATSASGRDNPVHIFRTWNDTQALKALCDGVRWSAKGRVGGVEVTKELTAGP 100
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig1000.119.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JYK1_9PHAE4.110e-3276.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig1000contigP-lacustris_contig1000:29029..29349 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig1000.119.1mRNA_P-lacustris_contig1000.119.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig1000 28745..29349 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig1000.119.1 ID=prot_P-lacustris_contig1000.119.1|Name=mRNA_P-lacustris_contig1000.119.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=107bp
MSHLRYYAAGMSHRPVLVGTTNPPIPTSPGLFPFITKGAVGNANTGGSTH
KEVKKSAASASGRDNPVHMFRAWNDNHGLKALCDGVRWRVRGREDGVEVE
KELTAGP
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