prot_P-lacustris_contig100.114.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig100.114.1
Unique Nameprot_P-lacustris_contig100.114.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length83
Homology
BLAST of mRNA_P-lacustris_contig100.114.1 vs. uniprot
Match: D8LEF6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEF6_ECTSI)

HSP 1 Score: 160 bits (405), Expect = 7.450e-50
Identity = 76/82 (92.68%), Postives = 78/82 (95.12%), Query Frame = 0
Query:    1 MGYDDLGNYWQHSLVLATGSADGNIHVFDLSKGQGDEIQTLRGHRDRVYSADFHPTEPKLVSSSADKTVRIWEPNRKRNARK 82
            MGY DLGN WQHSLVLATGSADG+IHVFDLSKGQGDEIQTL GHRDRVYSADFHPTEPKLVSSSADKTV IWEPNRKRN+RK
Sbjct:    1 MGYKDLGNDWQHSLVLATGSADGSIHVFDLSKGQGDEIQTLLGHRDRVYSADFHPTEPKLVSSSADKTVLIWEPNRKRNSRK 82          
BLAST of mRNA_P-lacustris_contig100.114.1 vs. uniprot
Match: A0A6H5KNQ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNQ7_9PHAE)

HSP 1 Score: 161 bits (408), Expect = 4.250e-45
Identity = 76/82 (92.68%), Postives = 78/82 (95.12%), Query Frame = 0
Query:    1 MGYDDLGNYWQHSLVLATGSADGNIHVFDLSKGQGDEIQTLRGHRDRVYSADFHPTEPKLVSSSADKTVRIWEPNRKRNARK 82
            MGY DLGN WQHSLVLATGSADG+IHVFDLSKGQGDEIQTLRGHRDRVYS DFHPTEPKLVSSSADKTV IWEPNRKRN+RK
Sbjct:  520 MGYKDLGNDWQHSLVLATGSADGSIHVFDLSKGQGDEIQTLRGHRDRVYSTDFHPTEPKLVSSSADKTVLIWEPNRKRNSRK 601          
BLAST of mRNA_P-lacustris_contig100.114.1 vs. uniprot
Match: A0A835Z281_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z281_9STRA)

HSP 1 Score: 126 bits (316), Expect = 9.250e-36
Identity = 57/84 (67.86%), Postives = 70/84 (83.33%), Query Frame = 0
Query:    1 MGYDDLGNYWQHSLVLATGSADGNIHVFDLSKGQGDEIQTLRGHRDRVYSADFHPTEPKLVSSSADKTVRIWEPNR--KRNARK 82
            +GY+D G  W HSLVLATGSADGNI+ FD+SKG+G ++QTLRGH DRVY+  FHPTEP+LVS SAD+TVRIW P++  +RN RK
Sbjct:   41 IGYEDSGKDWAHSLVLATGSADGNIYTFDMSKGEGGDLQTLRGHNDRVYAVHFHPTEPRLVSGSADQTVRIWGPSKGGRRNGRK 124          
BLAST of mRNA_P-lacustris_contig100.114.1 vs. uniprot
Match: R7QRT1_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QRT1_CHOCR)

HSP 1 Score: 83.2 bits (204), Expect = 8.580e-17
Identity = 39/70 (55.71%), Postives = 50/70 (71.43%), Query Frame = 0
Query:    6 LGNYWQHSLVLATGSADGNIHVFDLS--KGQGDEIQTLRGHRDRVYSADFHPTEPKLVSSSADKTVRIWE 73
            +G   Q+SL+LA+GSADGNI +FD+    G G  +QTL GH+DRVY  DFHP EP L S SAD  ++IW+
Sbjct:  482 IGGPIQNSLILASGSADGNICLFDVGGRPGTGALLQTLEGHKDRVYGVDFHPNEPILASCSADCGIKIWQ 551          
BLAST of mRNA_P-lacustris_contig100.114.1 vs. uniprot
Match: A0A2V3IL28_9FLOR (WD repeat-containing protein 5B n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IL28_9FLOR)

HSP 1 Score: 82.8 bits (203), Expect = 1.170e-16
Identity = 39/69 (56.52%), Postives = 49/69 (71.01%), Query Frame = 0
Query:    6 LGNYWQHSLVLATGSADGNIHVFDL--SKGQGDEIQTLRGHRDRVYSADFHPTEPKLVSSSADKTVRIW 72
            +G+  + SLVLA+GSADGN++VFD+  S G G  +QTL GH+D  YS DFHP EP L S SAD  + IW
Sbjct:  484 IGDAIESSLVLASGSADGNVYVFDVGGSAGTGTLVQTLIGHKDIAYSVDFHPCEPILASCSADSKINIW 552          
BLAST of mRNA_P-lacustris_contig100.114.1 vs. uniprot
Match: A0A7S2ZY62_9RHOD (Hypothetical protein n=3 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZY62_9RHOD)

HSP 1 Score: 80.1 bits (196), Expect = 9.950e-16
Identity = 37/66 (56.06%), Postives = 47/66 (71.21%), Query Frame = 0
Query:   13 SLVLATGSADGNIHVFDLSKGQGDE--IQTLRGHRDRVYSADFHPTEPKLVSSSADKTVRIWEPNR 76
            SL+LATGS DGN ++FD+S G G    IQ L GH+ R YS DFHP+EP L S SAD  V++W+ +R
Sbjct:  405 SLLLATGSVDGNAYLFDISGGSGTSKLIQVLEGHQGRCYSVDFHPSEPVLASCSADSIVKLWKLSR 470          
BLAST of mRNA_P-lacustris_contig100.114.1 vs. uniprot
Match: A0A7S0G0U8_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G0U8_9RHOD)

HSP 1 Score: 77.4 bits (189), Expect = 2.970e-15
Identity = 35/66 (53.03%), Postives = 47/66 (71.21%), Query Frame = 0
Query:   13 SLVLATGSADGNIHVFDLSKGQGDE--IQTLRGHRDRVYSADFHPTEPKLVSSSADKTVRIWEPNR 76
            SL+L+TGS DGN ++FD+S G G    IQ L GH+ R YS +FHP+EP L S SAD  V++W+ +R
Sbjct:  199 SLLLSTGSVDGNAYLFDISGGSGTSKLIQALEGHQGRCYSVEFHPSEPLLASCSADSIVKLWKLSR 264          
BLAST of mRNA_P-lacustris_contig100.114.1 vs. uniprot
Match: A0A8H7Q4N1_MORIS (GED domain-containing protein n=1 Tax=Mortierella isabellina TaxID=91625 RepID=A0A8H7Q4N1_MORIS)

HSP 1 Score: 77.4 bits (189), Expect = 9.060e-15
Identity = 32/72 (44.44%), Postives = 51/72 (70.83%), Query Frame = 0
Query:   11 QHSLVLATGSADGNIHVFDLSKGQGDEIQTLRGHRDRVYSADFHPTEPKLVSSSADKTVRIWEPNRKRNARK 82
            + S++LATGS+D  ++++++ +   + +Q L GH DRVY+A+FHPTEP L S SAD T+++W P   R  +K
Sbjct:  422 EKSVLLATGSSDPYVYLYNIGENTAELMQRLEGHTDRVYAANFHPTEPILASCSADYTIKVWGPGAPRGKKK 493          
BLAST of mRNA_P-lacustris_contig100.114.1 vs. uniprot
Match: A0A168T094_ABSGL (Uncharacterized protein n=1 Tax=Absidia glauca TaxID=4829 RepID=A0A168T094_ABSGL)

HSP 1 Score: 77.0 bits (188), Expect = 1.250e-14
Identity = 32/65 (49.23%), Postives = 49/65 (75.38%), Query Frame = 0
Query:   11 QHSLVLATGSADGNIHVFDLSKGQGDEIQTLRGHRDRVYSADFHPTEPKLVSSSADKTVRIWEPN 75
            + S++LATGSAD  ++++++ + + + +Q + GH DRVYS +FHPTEP L S SAD TV+IW P+
Sbjct:  439 EKSVLLATGSADPYVYLYNVGEDRSELMQRMEGHTDRVYSVNFHPTEPILASGSADFTVKIWGPS 503          
BLAST of mRNA_P-lacustris_contig100.114.1 vs. uniprot
Match: T0QW05_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0QW05_SAPDV)

HSP 1 Score: 73.9 bits (180), Expect = 1.510e-13
Identity = 40/87 (45.98%), Postives = 51/87 (58.62%), Query Frame = 0
Query:    1 MGYDD--LGNYWQHSLVLATGSADGNIHVFDLS-------KGQGDEIQTLRGHRDRVYSADFHPTEPKLVSSSADKTVRIWEPNRKR 78
            +GY D  L       ++LATGSAD  I++ D++        G    +Q L GH DRVYS DFHP+EP L S+SAD TV+IW P   R
Sbjct:  407 LGYQDRELQEKPDEVMLLATGSADNTIYLHDVTCRRGYGLNGSTSLLQRLEGHTDRVYSVDFHPSEPILASASADFTVKIWLPRTSR 493          
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig100.114.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LEF6_ECTSI7.450e-5092.68Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KNQ7_9PHAE4.250e-4592.68Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z281_9STRA9.250e-3667.86Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
R7QRT1_CHOCR8.580e-1755.71Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3IL28_9FLOR1.170e-1656.52WD repeat-containing protein 5B n=1 Tax=Gracilario... [more]
A0A7S2ZY62_9RHOD9.950e-1656.06Hypothetical protein n=3 Tax=Rhodosorus marinus Ta... [more]
A0A7S0G0U8_9RHOD2.970e-1553.03Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A8H7Q4N1_MORIS9.060e-1544.44GED domain-containing protein n=1 Tax=Mortierella ... [more]
A0A168T094_ABSGL1.250e-1449.23Uncharacterized protein n=1 Tax=Absidia glauca Tax... [more]
T0QW05_SAPDV1.510e-1345.98Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 34..73
e-value: 4.5E-10
score: 49.5
IPR001680WD40 repeatPFAMPF00400WD40coord: 36..72
e-value: 2.1E-8
score: 34.7
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 41..82
score: 15.12
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 10..82
e-value: 6.1E-20
score: 73.1
NoneNo IPR availablePANTHERPTHR44129FAMILY NOT NAMEDcoord: 15..78
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 16..82
score: 15.795
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 12..77

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig100contigP-lacustris_contig100:209833..210472 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig100.114.1mRNA_P-lacustris_contig100.114.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig100 209833..210472 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig100.114.1 ID=prot_P-lacustris_contig100.114.1|Name=mRNA_P-lacustris_contig100.114.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=83bp
MGYDDLGNYWQHSLVLATGSADGNIHVFDLSKGQGDEIQTLRGHRDRVYS
ADFHPTEPKLVSSSADKTVRIWEPNRKRNARK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf