mRNA_P-lacustris_contig100.114.1 (mRNA) Pleurocladia lacustris SAG_25_93
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_P-lacustris_contig100.114.1 vs. uniprot
Match: D8LEF6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEF6_ECTSI) HSP 1 Score: 160 bits (405), Expect = 7.450e-50 Identity = 76/82 (92.68%), Postives = 78/82 (95.12%), Query Frame = 1 Query: 1 MGYDDLGNYWQHSLVLATGSADGNIHVFDLSKGQGDEIQTLRGHRDRVYSADFHPTEPKLVSSSADKTVRIWEPNRKRNARK 246 MGY DLGN WQHSLVLATGSADG+IHVFDLSKGQGDEIQTL GHRDRVYSADFHPTEPKLVSSSADKTV IWEPNRKRN+RK Sbjct: 1 MGYKDLGNDWQHSLVLATGSADGSIHVFDLSKGQGDEIQTLLGHRDRVYSADFHPTEPKLVSSSADKTVLIWEPNRKRNSRK 82
BLAST of mRNA_P-lacustris_contig100.114.1 vs. uniprot
Match: A0A6H5KNQ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNQ7_9PHAE) HSP 1 Score: 161 bits (408), Expect = 4.250e-45 Identity = 76/82 (92.68%), Postives = 78/82 (95.12%), Query Frame = 1 Query: 1 MGYDDLGNYWQHSLVLATGSADGNIHVFDLSKGQGDEIQTLRGHRDRVYSADFHPTEPKLVSSSADKTVRIWEPNRKRNARK 246 MGY DLGN WQHSLVLATGSADG+IHVFDLSKGQGDEIQTLRGHRDRVYS DFHPTEPKLVSSSADKTV IWEPNRKRN+RK Sbjct: 520 MGYKDLGNDWQHSLVLATGSADGSIHVFDLSKGQGDEIQTLRGHRDRVYSTDFHPTEPKLVSSSADKTVLIWEPNRKRNSRK 601
BLAST of mRNA_P-lacustris_contig100.114.1 vs. uniprot
Match: A0A835Z281_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z281_9STRA) HSP 1 Score: 126 bits (316), Expect = 9.250e-36 Identity = 57/84 (67.86%), Postives = 70/84 (83.33%), Query Frame = 1 Query: 1 MGYDDLGNYWQHSLVLATGSADGNIHVFDLSKGQGDEIQTLRGHRDRVYSADFHPTEPKLVSSSADKTVRIWEPNR--KRNARK 246 +GY+D G W HSLVLATGSADGNI+ FD+SKG+G ++QTLRGH DRVY+ FHPTEP+LVS SAD+TVRIW P++ +RN RK Sbjct: 41 IGYEDSGKDWAHSLVLATGSADGNIYTFDMSKGEGGDLQTLRGHNDRVYAVHFHPTEPRLVSGSADQTVRIWGPSKGGRRNGRK 124
BLAST of mRNA_P-lacustris_contig100.114.1 vs. uniprot
Match: R7QRT1_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QRT1_CHOCR) HSP 1 Score: 83.2 bits (204), Expect = 8.580e-17 Identity = 39/70 (55.71%), Postives = 50/70 (71.43%), Query Frame = 1 Query: 16 LGNYWQHSLVLATGSADGNIHVFDLS--KGQGDEIQTLRGHRDRVYSADFHPTEPKLVSSSADKTVRIWE 219 +G Q+SL+LA+GSADGNI +FD+ G G +QTL GH+DRVY DFHP EP L S SAD ++IW+ Sbjct: 482 IGGPIQNSLILASGSADGNICLFDVGGRPGTGALLQTLEGHKDRVYGVDFHPNEPILASCSADCGIKIWQ 551
BLAST of mRNA_P-lacustris_contig100.114.1 vs. uniprot
Match: A0A2V3IL28_9FLOR (WD repeat-containing protein 5B n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IL28_9FLOR) HSP 1 Score: 82.8 bits (203), Expect = 1.170e-16 Identity = 39/69 (56.52%), Postives = 49/69 (71.01%), Query Frame = 1 Query: 16 LGNYWQHSLVLATGSADGNIHVFDL--SKGQGDEIQTLRGHRDRVYSADFHPTEPKLVSSSADKTVRIW 216 +G+ + SLVLA+GSADGN++VFD+ S G G +QTL GH+D YS DFHP EP L S SAD + IW Sbjct: 484 IGDAIESSLVLASGSADGNVYVFDVGGSAGTGTLVQTLIGHKDIAYSVDFHPCEPILASCSADSKINIW 552
BLAST of mRNA_P-lacustris_contig100.114.1 vs. uniprot
Match: A0A7S2ZY62_9RHOD (Hypothetical protein n=3 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZY62_9RHOD) HSP 1 Score: 80.1 bits (196), Expect = 9.950e-16 Identity = 37/66 (56.06%), Postives = 47/66 (71.21%), Query Frame = 1 Query: 37 SLVLATGSADGNIHVFDLSKGQGDE--IQTLRGHRDRVYSADFHPTEPKLVSSSADKTVRIWEPNR 228 SL+LATGS DGN ++FD+S G G IQ L GH+ R YS DFHP+EP L S SAD V++W+ +R Sbjct: 405 SLLLATGSVDGNAYLFDISGGSGTSKLIQVLEGHQGRCYSVDFHPSEPVLASCSADSIVKLWKLSR 470
BLAST of mRNA_P-lacustris_contig100.114.1 vs. uniprot
Match: A0A7S0G0U8_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G0U8_9RHOD) HSP 1 Score: 77.4 bits (189), Expect = 2.970e-15 Identity = 35/66 (53.03%), Postives = 47/66 (71.21%), Query Frame = 1 Query: 37 SLVLATGSADGNIHVFDLSKGQGDE--IQTLRGHRDRVYSADFHPTEPKLVSSSADKTVRIWEPNR 228 SL+L+TGS DGN ++FD+S G G IQ L GH+ R YS +FHP+EP L S SAD V++W+ +R Sbjct: 199 SLLLSTGSVDGNAYLFDISGGSGTSKLIQALEGHQGRCYSVEFHPSEPLLASCSADSIVKLWKLSR 264
BLAST of mRNA_P-lacustris_contig100.114.1 vs. uniprot
Match: A0A8H7Q4N1_MORIS (GED domain-containing protein n=1 Tax=Mortierella isabellina TaxID=91625 RepID=A0A8H7Q4N1_MORIS) HSP 1 Score: 77.4 bits (189), Expect = 9.060e-15 Identity = 32/72 (44.44%), Postives = 51/72 (70.83%), Query Frame = 1 Query: 31 QHSLVLATGSADGNIHVFDLSKGQGDEIQTLRGHRDRVYSADFHPTEPKLVSSSADKTVRIWEPNRKRNARK 246 + S++LATGS+D ++++++ + + +Q L GH DRVY+A+FHPTEP L S SAD T+++W P R +K Sbjct: 422 EKSVLLATGSSDPYVYLYNIGENTAELMQRLEGHTDRVYAANFHPTEPILASCSADYTIKVWGPGAPRGKKK 493
BLAST of mRNA_P-lacustris_contig100.114.1 vs. uniprot
Match: A0A168T094_ABSGL (Uncharacterized protein n=1 Tax=Absidia glauca TaxID=4829 RepID=A0A168T094_ABSGL) HSP 1 Score: 77.0 bits (188), Expect = 1.250e-14 Identity = 32/65 (49.23%), Postives = 49/65 (75.38%), Query Frame = 1 Query: 31 QHSLVLATGSADGNIHVFDLSKGQGDEIQTLRGHRDRVYSADFHPTEPKLVSSSADKTVRIWEPN 225 + S++LATGSAD ++++++ + + + +Q + GH DRVYS +FHPTEP L S SAD TV+IW P+ Sbjct: 439 EKSVLLATGSADPYVYLYNVGEDRSELMQRMEGHTDRVYSVNFHPTEPILASGSADFTVKIWGPS 503
BLAST of mRNA_P-lacustris_contig100.114.1 vs. uniprot
Match: T0QW05_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0QW05_SAPDV) HSP 1 Score: 73.9 bits (180), Expect = 1.510e-13 Identity = 40/87 (45.98%), Postives = 51/87 (58.62%), Query Frame = 1 Query: 1 MGYDD--LGNYWQHSLVLATGSADGNIHVFDLS-------KGQGDEIQTLRGHRDRVYSADFHPTEPKLVSSSADKTVRIWEPNRKR 234 +GY D L ++LATGSAD I++ D++ G +Q L GH DRVYS DFHP+EP L S+SAD TV+IW P R Sbjct: 407 LGYQDRELQEKPDEVMLLATGSADNTIYLHDVTCRRGYGLNGSTSLLQRLEGHTDRVYSVDFHPSEPILASASADFTVKIWLPRTSR 493 The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig100.114.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-lacustris_contig100.114.1 >prot_P-lacustris_contig100.114.1 ID=prot_P-lacustris_contig100.114.1|Name=mRNA_P-lacustris_contig100.114.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=83bp MGYDDLGNYWQHSLVLATGSADGNIHVFDLSKGQGDEIQTLRGHRDRVYSback to top mRNA from alignment at P-lacustris_contig100:209833..210472+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-lacustris_contig100.114.1 ID=mRNA_P-lacustris_contig100.114.1|Name=mRNA_P-lacustris_contig100.114.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=640bp|location=Sequence derived from alignment at P-lacustris_contig100:209833..210472+ (Pleurocladia lacustris SAG_25_93)back to top Coding sequence (CDS) from alignment at P-lacustris_contig100:209833..210472+ >mRNA_P-lacustris_contig100.114.1 ID=mRNA_P-lacustris_contig100.114.1|Name=mRNA_P-lacustris_contig100.114.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=498bp|location=Sequence derived from alignment at P-lacustris_contig100:209833..210472+ (Pleurocladia lacustris SAG_25_93)back to top |