prot_P-lacustris_contig100.113.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig100.113.1
Unique Nameprot_P-lacustris_contig100.113.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length202
Homology
BLAST of mRNA_P-lacustris_contig100.113.1 vs. uniprot
Match: A0A6H5KNQ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNQ7_9PHAE)

HSP 1 Score: 300 bits (768), Expect = 4.230e-96
Identity = 157/187 (83.96%), Postives = 166/187 (88.77%), Query Frame = 0
Query:   13 HLTKIKGSAGSAPVSSSFAPAVASPAFPPGGDVAQPPSRAVFDPRVGLATAHLDSLSLMNGAGMGVGSSSSGVAAGRVLVAEAKLSGHTAAVYVAKFSPRDSLVASAGFDRTLRLWEGSYPYSQVACLEGHRQLISDLCWAPDGRSLLSXXXXQTVAKWDTETGQRVGNMLSLEGLVQCVQVAAEGG 199
            ++  ++GSAGSAP S+S APA A P    GG+V  PPSR VFDPRVGLATAHLD+L LMNG G+GVGSS SG AAGRVLVAEAKLSGHTAAVYVAKFSPRDSLVASAGFDRTLRLWEG+YPYSQVACLEGHRQLISDLCWAPDGRSLLS    QTVAKWDTETGQRVGNMLSLEGLVQCVQVAAEGG
Sbjct:   51 YMLSMQGSAGSAPASASLAPAAARPGASTGGNVTGPPSREVFDPRVGLATAHLDALGLMNGGGIGVGSSGSGFAAGRVLVAEAKLSGHTAAVYVAKFSPRDSLVASAGFDRTLRLWEGAYPYSQVACLEGHRQLISDLCWAPDGRSLLSASFDQTVAKWDTETGQRVGNMLSLEGLVQCVQVAAEGG 237          
BLAST of mRNA_P-lacustris_contig100.113.1 vs. uniprot
Match: A0A835YSR1_9STRA (WD40-repeat-containing domain protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSR1_9STRA)

HSP 1 Score: 111 bits (278), Expect = 2.610e-27
Identity = 62/103 (60.19%), Postives = 69/103 (66.99%), Query Frame = 0
Query:   96 KLSGHTAAVYVAKFSPRDSLVASAGFDRTLRLWEGSYPYSQVACLEGHRQLISDLCWAPDGRSLLSXXXXQTVAKWDTETGQRVGNMLSLEGLVQCVQVAAEG 198
            KL GHTAAVY   FSP  +LVAS GFDRT+RLWEG YP+SQVACL  HRQL+SD            XXXX      DTETGQRV N+L LEG++QCV  A  G
Sbjct:   76 KLVGHTAAVYAVAFSPCGNLVASGGFDRTVRLWEGGYPHSQVACLAEHRQLVSDXXXXXXXXXXXXXXXXXXXXXXDTETGQRVNNVLRLEGMLQCVSYADGG 178          
BLAST of mRNA_P-lacustris_contig100.113.1 vs. uniprot
Match: D7FIJ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIJ7_ECTSI)

HSP 1 Score: 84.0 bits (206), Expect = 5.300e-17
Identity = 49/85 (57.65%), Postives = 60/85 (70.59%), Query Frame = 0
Query:   13 HLTKIKGSAGSAPVSSSFAPAVASPAFPPGGDVAQPPSRAVFDPRVGLATAHLDSLSLMNGAGMGVGSSSSGVAAGRVLVAEAKL 97
            ++  ++GSAGSAP S+S            GG+V  PPSR VFDPRVG+ATAHLDSL LMNG G+ VGS+   + AGR+LVAEAKL
Sbjct:   51 YMLSMQGSAGSAPASASLXXXXXXXXAATGGNVTGPPSRKVFDPRVGIATAHLDSLGLMNGGGIRVGSNGIRIPAGRILVAEAKL 135          
BLAST of mRNA_P-lacustris_contig100.113.1 vs. uniprot
Match: A0A1V9Z1V2_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z1V2_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 1.890e-14
Identity = 46/106 (43.40%), Postives = 63/106 (59.43%), Query Frame = 0
Query:   89 RVLVAEAKLSGHTAAVYVAKFSPRDSLVASAGFDRTLRLWEGSYPYSQ--VACLEGHRQLISDLCWAPDGRSLLSXXXXQTVAKWDTETGQRVGNMLSLEGLVQCV 192
            RVL  +++L GH  AVY  KFSP   L+AS   D  + LW+ +  ++Q  +A L  H QL+ D+ W+ D RSLLS     TV  WDT+ GQ + N + + GLVQ V
Sbjct:  107 RVLYQKSELRGHGGAVYTTKFSPCGRLLASGSLDCRVLLWDITTKFNQQQLASLASHNQLVIDMSWSNDSRSLLSASYDHTVNLWDTDKGQLL-NSIGVNGLVQTV 211          
BLAST of mRNA_P-lacustris_contig100.113.1 vs. uniprot
Match: A0A1V8SS61_9PEZI (Uncharacterized protein n=4 Tax=Rachicladosporium TaxID=470018 RepID=A0A1V8SS61_9PEZI)

HSP 1 Score: 78.2 bits (191), Expect = 1.410e-13
Identity = 34/103 (33.01%), Postives = 59/103 (57.28%), Query Frame = 0
Query:   96 KLSGHTAAVYVAKFSPRDSLVASAGFDRTLRLWEGSYPYSQVACLEGHRQLISDLCWAPDGRSLLSXXXXQTVAKWDTETGQRVGNMLSLEGLVQCVQVAAEG 198
            +++GH+A ++ A+FSP  + +ASAG DR + LW  S   +    L GH+  + DL W+ D + + S      +A W+ ETG+R+   +  E ++ C+ V+  G
Sbjct:   55 EMTGHSAEIFAARFSPSGAHIASAGADRDILLWHSSGDCANYGTLVGHKSAVLDLHWSRDSQVIYSASADMHIASWNVETGERIRRHVGHEEVINCIDVSKRG 157          
BLAST of mRNA_P-lacustris_contig100.113.1 vs. uniprot
Match: T0QW05_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0QW05_SAPDV)

HSP 1 Score: 72.4 bits (176), Expect = 2.220e-11
Identity = 42/92 (45.65%), Postives = 54/92 (58.70%), Query Frame = 0
Query:  103 AVYVAKFSPRDSLVASAGFDRTLRLWEGSYPYSQ--VACLEGHRQLISDLCWAPDGRSLLSXXXXQTVAKWDTETGQRVGNMLSLEGLVQCV 192
            AVY  KFSP   L+AS   D  + LW+ +  ++Q  +A L  H QLI D+ W+ D RSLLS     TV  WDT+ GQ V N + + GLVQ V
Sbjct:  134 AVYTTKFSPCGRLLASGSLDCRVLLWDITTKFNQQQLASLTQHNQLIIDISWSNDSRSLLSASYDHTVNLWDTDKGQLV-NSVGVNGLVQTV 224          
BLAST of mRNA_P-lacustris_contig100.113.1 vs. uniprot
Match: A0A1A0HJF3_9ASCO (Uncharacterized protein n=1 Tax=Metschnikowia bicuspidata var. bicuspidata NRRL YB-4993 TaxID=869754 RepID=A0A1A0HJF3_9ASCO)

HSP 1 Score: 65.9 bits (159), Expect = 2.730e-9
Identity = 40/106 (37.74%), Postives = 54/106 (50.94%), Query Frame = 0
Query:   97 LSGHTAAVYVAKFSPRDSLVASAGFDRTLRLWE----GSYPYSQVACLEGHRQLISDLCWAPDGRSLLSXXXXQTVAKWDTETGQRVGNMLSLEGLVQCVQVAAEG 198
            LSGHT AV+  +FS     +ASAG DRT+RLW               +EGH++ I+ L W    + +LS     TV+ WD ETGQR+      E  V     ++EG
Sbjct:   24 LSGHTGAVFSIEFSADGHNIASAGMDRTIRLWNLPTTADNEAPNYGVIEGHKKAITSLSWILSSK-ILSASADSTVSVWDAETGQRLKTGKGHELTVNDCSTSSEG 128          
BLAST of mRNA_P-lacustris_contig100.113.1 vs. uniprot
Match: A0A512UMM7_9ASCO (Uncharacterized protein n=1 Tax=Metschnikowia sp. JCM 33374 TaxID=2562755 RepID=A0A512UMM7_9ASCO)

HSP 1 Score: 64.7 bits (156), Expect = 6.930e-9
Identity = 36/87 (41.38%), Postives = 49/87 (56.32%), Query Frame = 0
Query:   97 LSGHTAAVYVAKFSPRDSLVASAGFDRTLRLWE----GSYPYSQVACLEGHRQLISDLCWAPDGRSLLSXXXXQTVAKWDTETGQRV 179
            LSGH+ AV+  KFSP    +ASAG DRT+RLW      +        +EGH+  ++ L W    + +LS     TV+ WD ETGQR+
Sbjct:   24 LSGHSGAVFSVKFSPDGQHIASAGTDRTIRLWNLPTRANEESPNYGVIEGHKGGLTALSWLSQSK-ILSTSADSTVSIWDAETGQRL 109          
BLAST of mRNA_P-lacustris_contig100.113.1 vs. uniprot
Match: A9V9T1_MONBE (Lactoylglutathione lyase n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9V9T1_MONBE)

HSP 1 Score: 64.7 bits (156), Expect = 1.100e-8
Identity = 33/84 (39.29%), Postives = 44/84 (52.38%), Query Frame = 0
Query:   96 KLSGHTAAVYVAKFSPRDSLVASAGFDRTLRLWEGSYPYSQVACLEGHRQLISDLCWAPDGRSLLSXXXXQTVAKWDTETGQRV 179
            +L GH  AVY   FSP   ++A+AGFDR + +W        +  L+GH   +  L WA     L S    +TVA WD  TG+RV
Sbjct:   73 RLEGHAEAVYAGTFSPSGHMLATAGFDRNVYVWNTFGNCENIMSLQGHTGAVLGLHWAKLENRLFSCSSDKTVAVWDGNTGERV 156          
BLAST of mRNA_P-lacustris_contig100.113.1 vs. uniprot
Match: A0A4P6XGR8_9ASCO (Prp8 binding protein n=1 Tax=Metschnikowia aff. pulcherrima TaxID=2163413 RepID=A0A4P6XGR8_9ASCO)

HSP 1 Score: 62.4 bits (150), Expect = 4.610e-8
Identity = 35/87 (40.23%), Postives = 45/87 (51.72%), Query Frame = 0
Query:   97 LSGHTAAVYVAKFSPRDSLVASAGFDRTLRLW----EGSYPYSQVACLEGHRQLISDLCWAPDGRSLLSXXXXQTVAKWDTETGQRV 179
            LSGH  A    KFSP    +ASAG DRT+RLW    +          +EGH+  ++ L W    + + +     TVA WD ETGQRV
Sbjct:   33 LSGHEGAALCVKFSPDGQNIASAGLDRTIRLWNLPTDAKDEVPNYGVIEGHKGAVTCLDWLAQSK-IFTGSADSTVAFWDAETGQRV 118          
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig100.113.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 23
Match NameE-valueIdentityDescription
A0A6H5KNQ7_9PHAE4.230e-9683.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YSR1_9STRA2.610e-2760.19WD40-repeat-containing domain protein (Fragment) n... [more]
D7FIJ7_ECTSI5.300e-1757.65Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A1V9Z1V2_9STRA1.890e-1443.40Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A1V8SS61_9PEZI1.410e-1333.01Uncharacterized protein n=4 Tax=Rachicladosporium ... [more]
T0QW05_SAPDV2.220e-1145.65Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A1A0HJF3_9ASCO2.730e-937.74Uncharacterized protein n=1 Tax=Metschnikowia bicu... [more]
A0A512UMM7_9ASCO6.930e-941.38Uncharacterized protein n=1 Tax=Metschnikowia sp. ... [more]
A9V9T1_MONBE1.100e-839.29Lactoylglutathione lyase n=1 Tax=Monosiga brevicol... [more]
A0A4P6XGR8_9ASCO4.610e-840.23Prp8 binding protein n=1 Tax=Metschnikowia aff. pu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 90..129
e-value: 2.5E-6
score: 37.0
coord: 133..172
e-value: 4.1E-7
score: 39.6
IPR001680WD40 repeatPFAMPF00400WD40coord: 137..172
e-value: 4.1E-4
score: 21.1
coord: 96..128
e-value: 4.2E-4
score: 21.1
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 140..181
score: 14.452
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 97..129
score: 13.951
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 83..201
e-value: 2.1E-26
score: 94.7
NoneNo IPR availablePANTHERPTHR44006:SF1U5 SMALL NUCLEAR RIBONUCLEOPROTEIN 40 KDA PROTEINcoord: 96..198
NoneNo IPR availablePANTHERPTHR44006FAMILY NOT NAMEDcoord: 96..198
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 116..130
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 97..181
score: 21.726
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 96..194

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig100contigP-lacustris_contig100:204761..206874 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig100.113.1mRNA_P-lacustris_contig100.113.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig100 204113..206874 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig100.113.1 ID=prot_P-lacustris_contig100.113.1|Name=mRNA_P-lacustris_contig100.113.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=202bp
MFETHLGLCGCRHLTKIKGSAGSAPVSSSFAPAVASPAFPPGGDVAQPPS
RAVFDPRVGLATAHLDSLSLMNGAGMGVGSSSSGVAAGRVLVAEAKLSGH
TAAVYVAKFSPRDSLVASAGFDRTLRLWEGSYPYSQVACLEGHRQLISDL
CWAPDGRSLLSASFDQTVAKWDTETGQRVGNMLSLEGLVQCVQVAAEGGG
EG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf