prot_P-lacustris_contig100.112.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig100.112.1
Unique Nameprot_P-lacustris_contig100.112.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length473
Homology
BLAST of mRNA_P-lacustris_contig100.112.1 vs. uniprot
Match: D7FIJ8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIJ8_ECTSI)

HSP 1 Score: 503 bits (1294), Expect = 2.030e-166
Identity = 331/472 (70.13%), Postives = 362/472 (76.69%), Query Frame = 0
Query:    1 MIDMKATLAKEHPAAVVYRPKTIHIGIQHSKMILLKYKTGVRVVIMTCNMRPDDWGGRCQAAWYQDFPFKPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRLTEERQGGGGNQGVGKKWRGEDGAATATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELPTSEFEAVLIDFFEHLGGPAAEWGRSLSAYDFSAANVTLITSVPGRHHGKNLYKYGHLRVRAVLANEEVHVRPGSHRVAFQVASIMNLSRRPYKWLGEITESFMAEKTSSNNGEDGKKVVPEVDVGYAAEQERKQKMMEEAEKMKGANKPKKPLGQCKDPWRDKVILEKRLEKREMRDAIRRRNVLGKLREKKPKPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALIKWVGKERRRNWFFDFLRVVWPTEEAVRTSNLGWQSGAGMPCLTTTLYEGGYRKCDANFHLNRVMVE 472
            ++ MKA L +EHPAAVVY PKTIHIG+ HSKMILLKYKTGVRVVIMTCNMRPDDWGGRCQAAWYQDFPFKPP                               P                    GE G A A  A     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   + TSEFE +LID+FEH+GGPAA WGRSLSAYDFS+ANVTLI SVPGRH G++LY+YGH+RVRAVLA EEVHVRPGSHRVAFQ ASIMNLSRRPYKWLGEITESFMAEKTSS +G++GKK + ++DVG A E+E ++K  E+ E+ KG N+PKKPLGQ KDPW DK ILEKR E+ E R+AI RRNVLG L  KK       XXXXXXXXXXXXXXXXXXXXXXXX ALIKWVGKER+RNWF  FLRVVWPTEEAVRTSNLGW+SGAGMPCLTTTLYEGGYRKC+ N+ LNRVM E
Sbjct:  247 VVSMKAFLKREHPAAVVYLPKTIHIGLHHSKMILLKYKTGVRVVIMTCNMRPDDWGGRCQAAWYQDFPFKPPRAKSKGKEKARGKAGKRKRVGADAAPILDEEPXXXXXXX----XXXXXXXXXGESGVAAADDAGGAGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXV--VITSEFEEILIDYFEHVGGPAAVWGRSLSAYDFSSANVTLIPSVPGRHKGRDLYRYGHMRVRAVLAREEVHVRPGSHRVAFQAASIMNLSRRPYKWLGEITESFMAEKTSSKDGKNGKKAIRDIDVGLAEEEEMRRKKXEQDERNKGKNQPKKPLGQRKDPWGDKGILEKRKERAERREAIHRRNVLGILPPKKX------XXXXXXXXXXXXXXXXXXXXXXXXAALIKWVGKERKRNWFMKFLRVVWPTEEAVRTSNLGWESGAGMPCLTTTLYEGGYRKCETNYQLNRVMEE 706          
BLAST of mRNA_P-lacustris_contig100.112.1 vs. uniprot
Match: A0A6H5KBB1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBB1_9PHAE)

HSP 1 Score: 221 bits (564), Expect = 1.350e-65
Identity = 161/305 (52.79%), Postives = 176/305 (57.70%), Query Frame = 0
Query:   32 MILLKYKTGVRVVIMTCNMRPDDWGGRCQAAWYQDFPFKPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRLTEERQGGGGNQGVGKKWRGEDGAATATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELPTSEFEA---VLIDFFEHLGGPAAEWGRSLSAYDFSAANVTLITSVPGRHHGKNLYKYGHLRVRAVLANEEVHVRPGSHRVAFQVASIMNLSRRPYKWLGEITESFMAEKTSSNNGEDGKKVVPEVDVGYAAEQERKQKMMEEAEKMKGANKPKKPLG 333
            MILLKYKTGVRVVIMTCNMRPDDWGGRCQAAWYQ FPFKPP                               P L EE                          XXXXXXXXXXXXXXX                XXXXXXX    + TSEFE    +LID+FEH+GGPAA WGRSL AYDFS+AN TLI SVPGRH GK+LY                       RVAFQ AS+MNLS RPYKWLGEITESFMAEKT   NG+DGKK + ++DVG A E+E + K  E+ E+ KG NKPKKPLG
Sbjct:    1 MILLKYKTGVRVVIMTCNMRPDDWGGRCQAAWYQGFPFKPPRAKSKGKEKARGKAGTRKRVGADAA------PILDEEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKRVASDSEEDYPKEGXXXXXXXHDDVVITSEFEVGEEILIDYFEHVGGPAAVWGRSLFAYDFSSANATLIPSVPGRHKGKDLY-----------------------RVAFQAASVMNLSLRPYKWLGEITESFMAEKTGGKNGKDGKKAIRDIDVGLAEEEEVRMKTKEQDERNKGKNKPKKPLG 276          
BLAST of mRNA_P-lacustris_contig100.112.1 vs. uniprot
Match: D8LE95_ECTSI (Tyrosyl-DNA phosphodiesterase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LE95_ECTSI)

HSP 1 Score: 91.7 bits (226), Expect = 5.110e-16
Identity = 49/134 (36.57%), Postives = 75/134 (55.97%), Query Frame = 0
Query:  183 FEAVLIDFFEHLGGPAAEWGRSLSAYDFSAANVTLITSVPGR-----------HHGKNLYKYGHLRVRAVLANEE-----VHVRPGSHRVAFQVASIMNLSRRPYKWLGEITESFMAEKTSSNNGEDGKKVVPE 300
            F+  L+ F   +GGPA+ +  +L  YDF  A V L+ SVPG            H G++L+KYGH+RVRA+LA E+       ++ G H+V  Q++S+ +L++ P +WL EI  SFM  +      E  ++ V E
Sbjct:  224 FQEDLMGFLFKVGGPASAFASTLGEYDFRGARVALVPSVPGTGGNTPGTGGKPHKGRDLHKYGHMRVRALLAREKEDGTGAKLKEGGHKVLCQISSLASLTKTPNRWLSEILASFMPLEDEGKKAEPTRRSVSE 357          
BLAST of mRNA_P-lacustris_contig100.112.1 vs. uniprot
Match: W4H376_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H376_9STRA)

HSP 1 Score: 77.4 bits (189), Expect = 1.390e-11
Identity = 44/115 (38.26%), Postives = 69/115 (60.00%), Query Frame = 0
Query:  179 PTSEFEAVLIDFFEHLGGPAAE--WGRSLSAYDFSAANVTLITSVPGRHHGKN-LYKYGHLRVRAVLANEEVHVRPGSHRVAFQVASIMNLSRRPYKWLGEITESFMAEKTSSNN 290
            P+  FE+ L+D+   L  PA       S   YDF+AANVTL+ SVPG H G + ++KYGHLR++ +L   + HV P +H +  Q +S+ +L     KW+GE  +SF+    ++++
Sbjct:  160 PSCAFESDLLDYMTALKAPAVTSLCRSSFPRYDFTAANVTLVASVPGVHQGIDAMHKYGHLRMKKLL---QQHVAPHNHPLVCQYSSLGSLDE---KWIGEFYKSFVPGSAATSS 268          
BLAST of mRNA_P-lacustris_contig100.112.1 vs. uniprot
Match: A0A6A4E9V0_9STRA (Tyrosyl-DNA phosphodiesterase 1 n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A4E9V0_9STRA)

HSP 1 Score: 75.5 bits (184), Expect = 6.630e-11
Identity = 44/106 (41.51%), Postives = 62/106 (58.49%), Query Frame = 0
Query:  181 SEFEAVLIDFFEHLGGPAAEWGRSLSAYDFSAANVTLITSVPGRHHGKNLYKYGHLRVRAVLANEEVHVRPGSHRVAFQVASIMNLSRRPYKWL-GEITESFMAEK 285
            ++FEA L+ +   LG     + R L  +DFS+A V L+ SVPG H GK++ KYGHLRVR +L  +   V P  + +  Q +S+ +L     KWL GE  ESF+  K
Sbjct:  208 NDFEADLVHYLSSLGAQVKIFCRELKRFDFSSARVALVPSVPGYHKGKDMEKYGHLRVRKLL--KMYQVPPTDNPLICQFSSMGSLDE---KWLFGEFAESFLPGK 308          
BLAST of mRNA_P-lacustris_contig100.112.1 vs. uniprot
Match: A0A0L0H4M0_SPIPD (Uncharacterized protein n=1 Tax=Spizellomyces punctatus (strain DAOM BR117) TaxID=645134 RepID=A0A0L0H4M0_SPIPD)

HSP 1 Score: 74.7 bits (182), Expect = 1.210e-10
Identity = 44/111 (39.64%), Postives = 62/111 (55.86%), Query Frame = 0
Query:  181 SEFEAVLIDFFEHLGGPAAEWGRSLSAYDFSAANVTLITSVPGRHHGKNLYKYGHLRVRAVLANEEVHVRPGSHRVAF-QVASIMNLSRRPYKWLGEITESFMAEKTSSNN 290
            S+FE  L+ + +  G P  EW   LS YDFS  N  +I SVPGRH GK L ++GHLR+R+VL    +  +  S  +   Q +SI +L     +WL   T+ F A  ++S N
Sbjct:  220 SDFEVDLLAYIKAYGHPLREWHEKLSLYDFSTCNAVIIASVPGRHVGKGLRRWGHLRLRSVLDEVTIGEQCQSKSIVVGQFSSIGSLGTSD-EWL---TQEFGASLSASRN 326          
BLAST of mRNA_P-lacustris_contig100.112.1 vs. uniprot
Match: A0A507EE42_9FUNG (Uncharacterized protein n=1 Tax=Spizellomyces sp. 'palustris' TaxID=117820 RepID=A0A507EE42_9FUNG)

HSP 1 Score: 73.2 bits (178), Expect = 1.410e-10
Identity = 42/112 (37.50%), Postives = 64/112 (57.14%), Query Frame = 0
Query:  180 TSEFEAVLIDFFEHLGGPAAEWGRSLSAYDFSAANVTLITSVPGRHHGKNLYKYGHLRVRAVLANEEVHVRPGSHRVAF-QVASIMNLSRRPYKWLGEITESFMAEKTSSNN 290
            TS+FE  L+ + +  G P + W   LS YDFS  N  +I SVPGRH G++L ++GHLR+R+VL    +  +  S  +   Q +SI +L     +WL   T+ F A  +++ N
Sbjct:   14 TSDFEVDLLAYIKAYGHPLSVWHEKLSLYDFSTCNAVIIASVPGRHLGRDLRRWGHLRLRSVLEEVTIGEQCQSKSIVVGQFSSIGSLGTSD-EWL---TQEFGASLSTARN 121          
BLAST of mRNA_P-lacustris_contig100.112.1 vs. uniprot
Match: A0A833TKC6_PHYIN (Tyrosyl-DNA phosphodiesterase n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833TKC6_PHYIN)

HSP 1 Score: 74.3 bits (181), Expect = 1.430e-10
Identity = 43/107 (40.19%), Postives = 62/107 (57.94%), Query Frame = 0
Query:  180 TSEFEAVLIDFFEHLGGPAAEWGRSLSAYDFSAANVTLITSVPGRHHGKNLYKYGHLRVRAVLANEEVHVRPGSHRVAFQVASIMNLSRRPYKWL-GEITESFMAEK 285
            +S+FEA L+ +   LG P   +   L  +DFS+A V L+ SVPG H GK++ KYGHLRVR +L  +   + P  + +  Q +S+ +L     KWL GE  ES +  K
Sbjct:  177 SSDFEADLVHYLSSLGAPVKLFCGELKRFDFSSARVALVPSVPGVHKGKDMEKYGHLRVRKLL--KMYKIPPTDNPLICQFSSLGSLDE---KWLFGEFAESLLPGK 278          
BLAST of mRNA_P-lacustris_contig100.112.1 vs. uniprot
Match: A0A225WPR3_9STRA (Tyrosyl-DNA phosphodiesterase n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WPR3_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 1.520e-10
Identity = 45/106 (42.45%), Postives = 60/106 (56.60%), Query Frame = 0
Query:  181 SEFEAVLIDFFEHLGGPAAEWGRSLSAYDFSAANVTLITSVPGRHHGKNLYKYGHLRVRAVLANEEVHVRPGSHRVAFQVASIMNLSRRPYKWL-GEITESFMAEK 285
            SEFEA L  +   LG P   +   L  +DFS A V L+ +VPG H GK++ KYGHLRVR +L  +   V P  + +  Q +S+ +L     KWL GE  ESF+  K
Sbjct:  303 SEFEADLAHYLSSLGAPVKVFCGELKRFDFSTARVALVPAVPGVHKGKDMEKYGHLRVRKLL--KMYKVPPTDNPLICQFSSLGSLDE---KWLFGEFAESFLPGK 403          
BLAST of mRNA_P-lacustris_contig100.112.1 vs. uniprot
Match: H3GC32_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GC32_PHYRM)

HSP 1 Score: 67.4 bits (163), Expect = 2.480e-8
Identity = 41/106 (38.68%), Postives = 60/106 (56.60%), Query Frame = 0
Query:  181 SEFEAVLIDFFEHLGGPAAEWGRSLSAYDFSAANVTLITSVPGRHHGKNLYKYGHLRVRAVLANEEVHVRPGSHRVAFQVASIMNLSRRPYKWL-GEITESFMAEK 285
            ++FE  L+ +   LG     +   L  +DFS A+V LI SVPG H GK++ +YGHLRVR +L  +  +V    + +  Q +S+ +L     KWL GE  ESF+  K
Sbjct:  193 NDFEEDLVHYLSSLGAQVKLFCGELKRFDFSRAHVALIPSVPGVHKGKDMERYGHLRVRKLL--KTFNVPQTDNPLICQFSSLGSLDE---KWLFGEFAESFLPGK 293          
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig100.112.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FIJ8_ECTSI2.030e-16670.13Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KBB1_9PHAE1.350e-6552.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LE95_ECTSI5.110e-1636.57Tyrosyl-DNA phosphodiesterase n=2 Tax=Ectocarpus T... [more]
W4H376_9STRA1.390e-1138.26Uncharacterized protein n=2 Tax=Aphanomyces astaci... [more]
A0A6A4E9V0_9STRA6.630e-1141.51Tyrosyl-DNA phosphodiesterase 1 n=4 Tax=Phytophtho... [more]
A0A0L0H4M0_SPIPD1.210e-1039.64Uncharacterized protein n=1 Tax=Spizellomyces punc... [more]
A0A507EE42_9FUNG1.410e-1037.50Uncharacterized protein n=1 Tax=Spizellomyces sp. ... [more]
A0A833TKC6_PHYIN1.430e-1040.19Tyrosyl-DNA phosphodiesterase n=1 Tax=Phytophthora... [more]
A0A225WPR3_9STRA1.520e-1042.45Tyrosyl-DNA phosphodiesterase n=1 Tax=Phytophthora... [more]
H3GC32_PHYRM2.480e-838.68Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 305..325
NoneNo IPR availableCOILSCoilCoilcoord: 379..399
NoneNo IPR availableGENE3D3.30.870.10coord: 2..88
e-value: 1.6E-17
score: 65.4
NoneNo IPR availablePANTHERPTHR12415:SF0TYROSYL-DNA PHOSPHODIESTERASE 1coord: 7..448
NoneNo IPR availableSUPERFAMILY56024Phospholipase D/nucleasecoord: 214..290
NoneNo IPR availableSUPERFAMILY56024Phospholipase D/nucleasecoord: 14..239
IPR027415Tyrosyl-DNA phosphodiesterase, C-terminalGENE3D3.30.870.20coord: 215..317
e-value: 2.4E-11
score: 45.6
IPR010347Tyrosyl-DNA phosphodiesterase IPFAMPF06087Tyr-DNA_phosphocoord: 175..308
e-value: 3.4E-17
score: 62.5
coord: 23..85
e-value: 3.2E-13
score: 49.4
IPR010347Tyrosyl-DNA phosphodiesterase IPANTHERPTHR12415TYROSYL-DNA PHOSPHODIESTERASE 1coord: 7..448

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig100contigP-lacustris_contig100:192855..199304 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig100.112.1mRNA_P-lacustris_contig100.112.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig100 186081..202869 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig100.112.1 ID=prot_P-lacustris_contig100.112.1|Name=mRNA_P-lacustris_contig100.112.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=473bp
MIDMKATLAKEHPAAVVYRPKTIHIGIQHSKMILLKYKTGVRVVIMTCNM
RPDDWGGRCQAAWYQDFPFKPPPPENQKGKGKEKFTPKDKGQKRKRVVGA
GAGPRLTEERQGGGGNQGVGKKWRGEDGAATATGARQEEGAGAGQGSKRK
REESAGEGGEPDEEEEDGNDDDGDDDELPTSEFEAVLIDFFEHLGGPAAE
WGRSLSAYDFSAANVTLITSVPGRHHGKNLYKYGHLRVRAVLANEEVHVR
PGSHRVAFQVASIMNLSRRPYKWLGEITESFMAEKTSSNNGEDGKKVVPE
VDVGYAAEQERKQKMMEEAEKMKGANKPKKPLGQCKDPWRDKVILEKRLE
KREMRDAIRRRNVLGKLREKKPKPPKRLGKKAMKRKRKEEREVREVREAA
AAAALIKWVGKERRRNWFFDFLRVVWPTEEAVRTSNLGWQSGAGMPCLTT
TLYEGGYRKCDANFHLNRVMVE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027415TDP_C
IPR010347Tdp1