prot_P-lacustris_contig100.106.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig100.106.1
Unique Nameprot_P-lacustris_contig100.106.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length436
Homology
BLAST of mRNA_P-lacustris_contig100.106.1 vs. uniprot
Match: D7FIK2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIK2_ECTSI)

HSP 1 Score: 493 bits (1268), Expect = 5.580e-170
Identity = 285/392 (72.70%), Postives = 307/392 (78.32%), Query Frame = 0
Query:    1 MYTVGERVRTITGPGKSCRGLILCIGSTEEDNPTYDVLLQSPDPTSAAVASAXXXXXXVADAQQKLLERAEEPASTTSPPHAATDRNRDRELTGLSASTLSPLQPFELHESMK--VAACGAAISSVAQRLKDNGNTLFKLGDTDAAAEMFVQVLRTLERAPVVGATVLVRVLPNTDTNGSTPARYRSGMVSDAN-DDGPLPMYDVIYDESGTSSPTGSKDEEPDAXXXXXXXDGVAADRVLALPVSPSVWCAARLNLARCSFRRGMHVEVVEACTLVLSVARLTMGQKERPREERAKLRAHCLTALRMRGGSHLAQHHVGQARKDARSIVRSSGDSEESRTQAARFEAEVERKAKALLKTNRKLAKDVTRWVDASMAKHEEACLKRVDETLP 389
            M++VGERVR  TGPGKSCRGLILC+GSTEE NPTYDVLLQSPDPTS A+A+A       ADA+Q      EE A+             +RELTGLSAS+LS LQPFEL +S +   A   A +   A+RLKD GNTLFKLGDTDAAAEMF +VLRTLERAPVVGATVLVRV      NG+T   YRSGMVSDAN DDGP P YDVIYDE+   S           XXXXXXXDGV+ DRVL +P+SP VWCAARLNLARCSFRRG H EVVEACTLVLS+ARLTMGQK+RPREERAKLRAHCLTALRMRGGSHLAQHHVGQARKDARS+VRSSGD EESR QA RFEAEVERKAK LLKTNRKLAKDVTRWVDASMAKHEE CLK VDE  P
Sbjct:    1 MHSVGERVRVSTGPGKSCRGLILCVGSTEEGNPTYDVLLQSPDPTSTAIATASSPSSITADARQ------EEDAT-------------ERELTGLSASSLSTLQPFELDQSTEDIQAVAEAEVVLAAERLKDGGNTLFKLGDTDAAAEMFARVLRTLERAPVVGATVLVRV-----PNGATSTCYRSGMVSDANEDDGPCPTYDVIYDETAVKSAXXXXXXXXXXXXXXXXXDGVSPDRVLGVPLSPCVWCAARLNLARCSFRRGRHEEVVEACTLVLSLARLTMGQKKRPREERAKLRAHCLTALRMRGGSHLAQHHVGQARKDARSMVRSSGD-EESRAQATRFEAEVERKAKTLLKTNRKLAKDVTRWVDASMAKHEEGCLKTVDEAPP 367          
BLAST of mRNA_P-lacustris_contig100.106.1 vs. uniprot
Match: A0A6H5KE72_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE72_9PHAE)

HSP 1 Score: 396 bits (1018), Expect = 8.900e-134
Identity = 224/327 (68.50%), Postives = 249/327 (76.15%), Query Frame = 0
Query:    1 MYTVGERVRTITGPGKSCRGLILCIGSTEEDNPTYDVLLQSPDPTSAAVASAXXXXXXVADAQQKLLERAEEPASTTSPPHAATDRNRDRELTGLSASTLSPLQPFELHESMK--VAACGAAISSVAQRLKDNGNTLFKLGDTDAAAEMFVQVLRTLERAPVVGATVLVRVLPNTDTNGSTPARYRSGMVSDAND-DGPLPMYDVIYDESGTSSPTGSKDEEPDAXXXXXXXDGVAADRVLALPVSPSVWCAARLNLARCSFRRGMHVEVVEACTLVLSVARLTMGQKERPREERAKLRAHCLTALRMRGGSHLAQHHVGQARKDAR 324
            M++VGERVR  TGPGKSCRGLILC+GST+E+NPTYDVLLQSPDPTS A+A+A       ADA+Q+                       +RELTGLSAS+LS LQPFEL +S +   A     ++   +RLKD GNTLFKLGDTDAAAEMF + LRTLERAPVVGATVLVRVLPN    G+T  RYRSGMVSDAN+ DGP P YDVIYDE+   S           XXXXXXXDGV+ DRVL +P+SP VWCAARLNLARCSFRRG H EVVEACTLVLS+ARLTMGQK+RPREERAKLRAHCLTALRMRGGSHLAQHHVGQARKDAR
Sbjct:    1 MHSVGERVRVSTGPGKSCRGLILCVGSTQEENPTYDVLLQSPDPTSTAIATASSPSSITADARQEDA--------------------TERELTGLSASSLSALQPFELDQSTEDIEAVAEVEVALAGERLKDGGNTLFKLGDTDAAAEMFARALRTLERAPVVGATVLVRVLPN----GATATRYRSGMVSDANEGDGPCPTYDVIYDEAAVKSAXXXXXXXXXXXXXXXXXDGVSPDRVLGVPLSPCVWCAARLNLARCSFRRGRHEEVVEACTLVLSLARLTMGQKKRPREERAKLRAHCLTALRMRGGSHLAQHHVGQARKDAR 303          
BLAST of mRNA_P-lacustris_contig100.106.1 vs. uniprot
Match: A0A835YM35_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YM35_9STRA)

HSP 1 Score: 92.4 bits (228), Expect = 7.690e-17
Identity = 88/298 (29.53%), Postives = 151/298 (50.67%), Query Frame = 0
Query:   91 ELTGLSASTLSPLQPFELHESMKV---AACGAAISSVAQRLKDNGNTLFKLGDTDAAAEMFVQVLRTLERAPVVGATVLVRVLPNTDTNGSTPARYRSGMVSDANDDGPLPMYDVIYDESGTSSPTGSKDEEPDAXXXXXXXDGVAADRVLALPVSPSVWCAARLNLARCSFRRGMHVEVVEACTLVLSVARLTMGQKERPR----EERAKLRAHCLTALRMRGGSHLAQHHVGQARKDARSIVRSS-GDSEESRTQAA-RFEAEVERKAKALLKTNRKLAKDVTRWVDASMAKHEEA 379
            E+ G+    +  L  FE   S+      +  A ++++ +RL+  G  LF L D +AA +++   L+ L     +G+ VLV +      +G      R+GM+S  + +      DVI+DE          DEE          + VAA RVL L + P       +N A+C+ + G   +  E   + LS   L +G+         E R +L A CL AL +R  +HLA   V  A +DA+++ +++ G ++++  +AA R  +E++R  +ALL+ +R+LA++V  WV+AS+ +H+EA
Sbjct:   39 EVNGVGQDAIEALFAFETDLSLPTDDTTSSTADLTTLVERLQGFGKQLFLLPDYEAAGDVYELALQHLTPPLTIGSEVLVPL-----DDGRV---CRAGMISAMSSE--TGTVDVIFDEEDEHG----VDEE----------EAVAASRVLRLSLLPLQHVTMLVNSAKCAAKAGSTQDARER-VVSLSTRALVLGKHYLATAPAGEARRRLHALCLNALHLRARAHLAAARVKPALRDAQAMRKAAAGGADDAAARAAERLVSEIKRAERALLRGDRRLAREVGAWVEASLKRHDEA 311          
BLAST of mRNA_P-lacustris_contig100.106.1 vs. uniprot
Match: A0A8J2SCK9_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SCK9_9STRA)

HSP 1 Score: 74.3 bits (181), Expect = 5.100e-11
Identity = 83/282 (29.43%), Postives = 121/282 (42.91%), Query Frame = 0
Query:   97 ASTLSPLQPFELHESMKVAACGAAISSVAQRLKDNGNTLFKLGDTDAAAEMFVQVLRTLERAPVVGATVLVRVLPNTDTNGSTPARYRSGMVSDANDDGPLPMYDVIYDESGTSSPTGSKDEEPDAXXXXXXXDGVAADRVLALPVSPSVWCAARLNLARCSFRRGMHVEVVEACTLVLSVARLTMGQKERPREERAKLRAHCLTALRMRGGSHLAQHHVGQARKDARSIVRSSGDSEESRTQAARFEAEVERKAKALLKTNRKLAKDVTRWVDASMAKHEE 378
            AS  S L  FE+ ES    ACG A       LK  GN LF   D   AA  + + L+ L+R P  GA VL+          +  ++ R G +SD +        DV+YD+          DE           D +   RV+ +     + C+  LNLA+C  +     +   A TL   +A  T         E  K R  C +A  +RG ++LAQ  +  A +DA   +  +     S   A   + + ER  K  L+ N+KLAK+VT+WV+ +  K  E
Sbjct:   85 ASKASSLLDFEMDES----ACGDA-----SELKRRGNALFGEKDWVNAAAHYERALKVLKRPPTTGARVLI----------NANSQLRCGTLSDVS----TKTVDVMYDDG--------VDE-----------DDLDRRRVILVVNDAELQCSLYLNLAKCGLKVNRLRDSTSAATLAGGLANST---------EELKARFLC-SARVVRGRANLAQKKLRHALRDADVALELNA----SDAGALALKRDAERAKKLALRENKKLAKEVTQWVETAQGKFTE 310          
BLAST of mRNA_P-lacustris_contig100.106.1 vs. uniprot
Match: F0Y769_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y769_AURAN)

HSP 1 Score: 74.7 bits (182), Expect = 1.430e-10
Identity = 72/254 (28.35%), Postives = 108/254 (42.52%), Query Frame = 0
Query:  129 KDNGNTLFKLGDTDAAAEMFVQVLRTLERAPVVGATVLVRVLPNTDTNGSTPARYRSGMVSDANDDGPLPMYDVIYDESGTSSPTGSKDEEPDAXXXXXXXDGVAADRVLAL----PVSPSVWCAARLNLARCSFRRGMHVEVVEACTLVLSVARLTMGQKERPREERAKLRAHCLTALRMRGGSHLAQHHVGQARKDARSIVRSSGDSEESRTQAARFEAEVERKAKALLKTNRKLAKDVTRWVDASMAKHEE 378
            K  G+ LF+  D  AA+  +   L  L+R   +G   LV V    ++NG+     R G VS  +DD      DV+YD+ G                     D ++  R+LA+    P   ++     LNLARC+ R     + V  CTL   +A                L  H +T   +R  +HL Q H+ QA +DA++      D   +         +VE   K  L+ N+KLAK+VT WV+++  K  E
Sbjct:  696 KARGSRLFQAKDYVAASGHYKAALGVLKRLYPLGVGALVEV----NSNGA----LRVGTVSGVDDD--EKTVDVMYDDGGEDD------------------DEISRKRILAVVAPKPEGRAIQLTTYLNLARCATRADRAKDAVSCCTLAGGIAAFD-----------ELLEHHLVTTKILRARAHLQQKHLKQALRDAKAAA----DLAPADKNVVALNRDVEAAKKRALRENKKLAKEVTAWVESAQGKFSE 906          
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig100.106.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FIK2_ECTSI5.580e-17072.70Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KE72_9PHAE8.900e-13468.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YM35_9STRA7.690e-1729.53Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A8J2SCK9_9STRA5.100e-1129.43Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
F0Y769_AURAN1.430e-1028.35Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 125..354

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig100contigP-lacustris_contig100:123595..136346 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig100.106.1mRNA_P-lacustris_contig100.106.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig100 123587..136560 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig100.106.1 ID=prot_P-lacustris_contig100.106.1|Name=mRNA_P-lacustris_contig100.106.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=436bp
MYTVGERVRTITGPGKSCRGLILCIGSTEEDNPTYDVLLQSPDPTSAAVA
SASAASSIVADAQQKLLERAEEPASTTSPPHAATDRNRDRELTGLSASTL
SPLQPFELHESMKVAACGAAISSVAQRLKDNGNTLFKLGDTDAAAEMFVQ
VLRTLERAPVVGATVLVRVLPNTDTNGSTPARYRSGMVSDANDDGPLPMY
DVIYDESGTSSPTGSKDEEPDAEEEDDEEDGVAADRVLALPVSPSVWCAA
RLNLARCSFRRGMHVEVVEACTLVLSVARLTMGQKERPREERAKLRAHCL
TALRMRGGSHLAQHHVGQARKDARSIVRSSGDSEESRTQAARFEAEVERK
AKALLKTNRKLAKDVTRWVDASMAKHEEACLKRVDETLPPGSFIGGTTTG
RGRGRRGCGGVKGYEREAGGGGNGGVKSWLGGWIR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf