prot_P-lacustris_contig10.89.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig10.89.1
Unique Nameprot_P-lacustris_contig10.89.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length142
Homology
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BLAST of mRNA_P-lacustris_contig10.89.1 vs. uniprot
Match: D8LHX8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHX8_ECTSI)

HSP 1 Score: 153 bits (386), Expect = 3.470e-45
Identity = 75/103 (72.82%), Postives = 85/103 (82.52%), Query Frame = 0 
Query:    1 MKGASATSGFLTCIVCGELKPTSDFTRNQLARPGRPLCNQCLMREGAVAPPPSRVAPAAGEGYVRCVACCQVKATSAFGINQLRRRAGIERCMSCVENDVGAV 103
            M+GASA SG +TC VCG  KP S+++RNQLAR  R +C  CLM +G VA PPSRVAPAAGEG VRCVACCQVK TS+FGINQLRRRAGIERCM CVE D+G+V
Sbjct:    1 MQGASA-SGAITCTVCGVRKPASEYSRNQLARSSREVCQVCLMSDGTVAAPPSRVAPAAGEGVVRCVACCQVKTTSSFGINQLRRRAGIERCMLCVEKDLGSV 102
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig10.89.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LHX8_ECTSI3.470e-4572.82Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR024630Stc1 domainPFAMPF12898Stc1coord: 11..42
e-value: 3.4E-5
score: 24.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig10contigP-lacustris_contig10:309736..310161 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig10.89.1mRNA_P-lacustris_contig10.89.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig10 309736..310161 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig10.89.1 ID=prot_P-lacustris_contig10.89.1|Name=mRNA_P-lacustris_contig10.89.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=142bp
MKGASATSGFLTCIVCGELKPTSDFTRNQLARPGRPLCNQCLMREGAVAP
PPSRVAPAAGEGYVRCVACCQVKATSAFGINQLRRRAGIERCMSCVENDV
GAVVLCIACHAPKPFTEFSKKQLACKPGSARCKACIESASR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR024630Stc1