|
|
Homology
BLAST of mRNA_P-lacustris_contig986.16158.1 vs. uniprot
Match: A0A6H5L027_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L027_9PHAE) HSP 1 Score: 243 bits (621), Expect = 7.080e-67 Identity = 225/528 (42.61%), Postives = 259/528 (49.05%), Query Frame = 3
Query: 978 MSVPKSNHSLFVMVKEAKDLKKVQIIGRQDPYLKLWVGRAGTKVKTKVHVDGGKLASWNESFLFNLENVDEEECLHFEVKNKNVTDSTTIGMGKTPLRHFGPTAKATWHKIYCVKGKLAGEVLLEGRVDRRCDGRMHYGYGCLLVFCDPPRYSPEPPSCSLIIXXXXXXXXFLYCPKSMLSLVLGAVSHPARRTQSAASISPPMSSYASMPYSQHPSSGYPGSPIGYSGSXPS---SAPVYGNHRPXXXXXXXXXXXXXXXXXXXXXXXDXX---TXXPSAYGGAQAPSPSGGCGAAQPPASAYGGL------------------GGGAGSSTA---------------------QRNPNAVYYGPAVGGXXXXXXXXXNGRSNSQGGASSPTMSLNWGASTAAQAAQRGSTASVPYPT--QWNQAAQSASTAVPYHAPSAPPXXXXXXXVAPAAASAYANG--------------------------GGVHDRPLRLPPGWEEKVSSNGRPYFVDHNTQTTHWIRPV 2342
M P + +L+++ KEA+ LK VQ+IGRQDPYLKLW GRAGTKVKTKVH DGGK+A+WNE+F F+L+NV EE L FE KNKNVTDS TIGMGK L++FGP A+ATWHKIY + GK+AGEVLLEGR+D R H G +V P P S SLI PP SS M Y QH S+G GY G P S YG RP XXXXXXXXXXXXXXXXXXXXX XX + PS+ A Y G G++ A QRNPNAVYYGPA G XXXXXX +G S G +P MSL WG AA AA Y T A PYHAP AP APA A+ Y+NG G RPL LPPGWEEKV+S+GR +FVDHNT++THW+RPV
Sbjct: 1 MQAPTPSKTLYIVAKEARGLKNVQLIGRQDPYLKLWAGRAGTKVKTKVHEDGGKVATWNETFAFDLQNVGAEEYLFFEAKNKNVTDSKTIGMGKISLKYFGPVAQATWHKIYSINGKVAGEVLLEGRMDDRHGMSTH---GAPMVGSTPGLGQP---SSSLI---------------------------------------PPQSS---MHYPQHQSAGGYSQSTGYGGRAPQPSLSTSAYGASRPPSXXXXXXXXXXXXXXXXXXXXXXXXXXSSRPPSSSXXXXXXXXXXXXXXXXXAAGRYNXXXXXXXXXXXXXXXXXXXXGSRVGAAPAXXXXXXXXXXXXXXXXAAGAPQRNPNAVYYGPAAG-SXXXXXXGFSGGSYRAGAPPTPAMSLKWGTPAAAPAAAXXX---XQYSTFGGXXXXXXXXXXATPYHAPLAPSAPSAPPATAPAPAAGYSNGSSPXXXXXXXXXXXXXXXXXXXXSGGGXGGARPLPLPPGWEEKVASDGRTFFVDHNTRSTHWVRPV 476
BLAST of mRNA_P-lacustris_contig986.16158.1 vs. uniprot
Match: D7G0H2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0H2_ECTSI) HSP 1 Score: 226 bits (576), Expect = 1.220e-60 Identity = 230/529 (43.48%), Postives = 260/529 (49.15%), Query Frame = 3
Query: 978 MSVPKSNHSLFVMVKEAKDLKKVQIIGRQDPYLKLWVGRAGTKVKTKVHVDGGKLASWNESFLFNLENVDEEECLHFEVKNKNVTDSTTIGMGKTPLRHFGPTAKATWHKIYCVKGKLAGEVLLEGRVDRRCDGRMHYGYGCLLVFCDP----PRYSPEPPSCSLIIXXXXXXXXFLYCPKSMLSLVLGAVSHPARRTQSAASISPPMSSYASMPYSQHPSSG-YPGSPIGYSGSXPS---SAPVYGNHRPXXXXXXXXXXXXXXXXXXXXXXX-----------------------------------DXXTXXPSAYGGAQ----------------APSPSGGCGAAQPPASAYGGLGGGAGSSTAQRNPNAVYYGPAVGGXXXXXXXXX--NGRSNSQGGASSPTMSLNWGASTAAQAAQRGSTASVPYPTQWNQAAQS-ASTAVPYHAPSAPPXXXXXXXVAPAAA-----------------------SAYANGGGVHDRPLRLPPGWEEKVSSNGRPYFVDH 2309
M P + +L+++ KEAK LK VQ+IGRQDPYLKLWVGRAGTKVKTKVH DGGK+A+WNE+F+F+L+NVD EEC HFE KNKNVTDS TIGMGK PL+HFGP A+ATWHKIY +KGK AGEVLLEGR+D R H G +V P P SP PP +SM Y QHPS+G YP S GY G P S YG R XXXXXXXXXXXXXXXXXXXXX PSAYGGA APSP+G GAAQPP S XXXXXXXX +G S G +P MSL WG AA AA + ST P +AAQS ASTA PYHAPS XXXXXXX ++ + G RPL LPPGWEEKV+S+GR +FVDH
Sbjct: 1 MQAPTPSKALYIVAKEAKGLKNVQMIGRQDPYLKLWVGRAGTKVKTKVHEDGGKVATWNETFVFDLQNVDAEECFHFEAKNKNVTDSKTIGMGKFPLKHFGPVAQATWHKIYNIKGKPAGEVLLEGRMDDRHGMSTH---GAPMVGSTPGLGQPSASPIPPQ-------------------------------------------------SSMHYPQHPSAGGYPQS-TGYGGGAPQPSLSTSAYGASRSPSXXXXXXXXXXXXXXXXXXXXXXXXXXXSRPPSSSXXXXXXXXXXXXXXXXXAAGWYSNPQAPPSAYGGAXXXXXXXXXXSRVAAAPAPSPAG-YGAAQPPXSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGFSGGSYRAGAPPTPAMSLKWGTPAAAPAAAQYSTFGGP------EAAQSSASTAAPYHAPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASGSGGXXXXARPLPLPPGWEEKVASDGRTFFVDH 469
BLAST of mRNA_P-lacustris_contig986.16158.1 vs. uniprot
Match: A0A835YV56_9STRA (C2 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV56_9STRA) HSP 1 Score: 108 bits (270), Expect = 3.630e-22 Identity = 56/121 (46.28%), Postives = 76/121 (62.81%), Query Frame = 3
Query: 1005 LFVMVKEAKDLKKVQIIGRQDPYLKLWVGRAGTKVKTKVHVDGGKLASWNESFLFNLENVDEEECLHFEVKNKNVTDSTTIGMGKTPLRHFGPTAKAT-WHKIYCVKGKLAGEVLLEGRVD 1364
L V + A+ LKKVQ+IG QDPYLKLW G G ++TKVH DGG A WN+ F+F++ V + ++FEV +KN+ S +IG GK P+ A WH+IY KG+ AG V L ++D
Sbjct: 6 LVVEARGARQLKKVQLIGTQDPYLKLWAGSGGDVLRTKVHTDGGSSAVWNQRFVFDVGAV-MGDFIYFEVADKNIMSSASIGCGKWPIASVPANATLDQWHEIYDAKGRSAGAVHLVMKLD 125
BLAST of mRNA_P-lacustris_contig986.16158.1 vs. uniprot
Match: A0A7S3JVD6_9STRA (Hypothetical protein n=2 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JVD6_9STRA) HSP 1 Score: 62.0 bits (149), Expect = 8.570e-7 Identity = 24/31 (77.42%), Postives = 28/31 (90.32%), Query Frame = 3
Query: 2250 LPPGWEEKVSSNGRPYFVDHNTQTTHWIRPV 2342
LPPGWEEKV+ +GR Y+VDHNT+TTHW RPV
Sbjct: 195 LPPGWEEKVAPDGRTYYVDHNTRTTHWDRPV 225
BLAST of mRNA_P-lacustris_contig986.16158.1 vs. uniprot
Match: A0A1E3QYR8_9ASCO (E3 ubiquitin-protein ligase n=1 Tax=Babjeviella inositovora NRRL Y-12698 TaxID=984486 RepID=A0A1E3QYR8_9ASCO) HSP 1 Score: 64.3 bits (155), Expect = 1.290e-6 Identity = 28/51 (54.90%), Postives = 35/51 (68.63%), Query Frame = 3
Query: 2187 VAPAAASAYANGGGVHDRPLRLPPGWEEKVSSNGRPYFVDHNTQTTHWIRP 2339
V PAAA+A A+ G LPPGWE++ + GRPYFVDHNT+TT W+ P
Sbjct: 267 VVPAAAAALASSGSTTAGLGELPPGWEQRFTPEGRPYFVDHNTRTTTWVDP 317
BLAST of mRNA_P-lacustris_contig986.16158.1 vs. uniprot
Match: A0A7S0H6J5_9EUKA (Hypothetical protein n=2 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0H6J5_9EUKA) HSP 1 Score: 63.5 bits (153), Expect = 1.490e-6 Identity = 43/125 (34.40%), Postives = 68/125 (54.40%), Query Frame = 3
Query: 1005 LFVMVKEAKDLKKVQIIGRQDPYLKLWVGRAGTKVKTKVHVDGGKLASWNESFLFNLENVDEEECLHFEVKNKNV-TDSTTIGMGKTPL-------RHFGPTAKATWHKIYCVKGKLAGEVLLEG 1355
L + +K AKDL+K Q++G+QDPY++ V AG K KTK H DG + W+ + F ++V ++ + F V NKN+ T +IG+ + P+ + P + H+ C GK+ E EG
Sbjct: 9 LSITLKRAKDLRKTQMLGKQDPYVE--VKFAGQKKKTKTHTDGDRFPVWDSTIEFKCQSV-KDFTIKFSVWNKNLATLDDSIGVLQIPVLVLLSNPSVWLPLYRHEDHRTEC--GKILVETKFEG 128
BLAST of mRNA_P-lacustris_contig986.16158.1 vs. uniprot
Match: UPI00165C6558 (E3 ubiquitin-protein ligase NEDD4a isoform X2 n=3 Tax=Fundulus heteroclitus TaxID=8078 RepID=UPI00165C6558) HSP 1 Score: 63.9 bits (154), Expect = 1.840e-6 Identity = 40/107 (37.38%), Postives = 55/107 (51.40%), Query Frame = 3
Query: 2205 SAYANGGGVHDRPL----RLPPGWEEKVSSNGRPYFVDHNTQTTHWIRPV*IELSTLSSTA*PAAGQPVCSSCAGDTGFSRLPPWVRASPTVHAWEGHQVGARICSL 2513
SA A+ H PL +LPPGWEEK GR Y+V+HNTQTT W+RP+ I+ ++ A PAA Q V + S P VR + + + + + SL
Sbjct: 343 SAQASTREEHPVPLPASTQLPPGWEEKRDGKGRRYYVNHNTQTTTWVRPI-IQRPAETAPAAPAAAQSVSALPQNHNSPSHPP--VRPAESSQPRPSSEAASELSSL 446
BLAST of mRNA_P-lacustris_contig986.16158.1 vs. uniprot
Match: UPI00165C448D (E3 ubiquitin-protein ligase NEDD4a isoform X1 n=1 Tax=Fundulus heteroclitus TaxID=8078 RepID=UPI00165C448D) HSP 1 Score: 63.9 bits (154), Expect = 2.020e-6 Identity = 40/107 (37.38%), Postives = 55/107 (51.40%), Query Frame = 3
Query: 2205 SAYANGGGVHDRPL----RLPPGWEEKVSSNGRPYFVDHNTQTTHWIRPV*IELSTLSSTA*PAAGQPVCSSCAGDTGFSRLPPWVRASPTVHAWEGHQVGARICSL 2513
SA A+ H PL +LPPGWEEK GR Y+V+HNTQTT W+RP+ I+ ++ A PAA Q V + S P VR + + + + + SL
Sbjct: 646 SAQASTREEHPVPLPASTQLPPGWEEKRDGKGRRYYVNHNTQTTTWVRPI-IQRPAETAPAAPAAAQSVSALPQNHNSPSHPP--VRPAESSQPRPSSEAASELSSL 749
BLAST of mRNA_P-lacustris_contig986.16158.1 vs. uniprot
Match: A0A7S4E7G2_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E7G2_9STRA) HSP 1 Score: 60.1 bits (144), Expect = 3.770e-6 Identity = 22/30 (73.33%), Postives = 27/30 (90.00%), Query Frame = 3
Query: 2250 LPPGWEEKVSSNGRPYFVDHNTQTTHWIRP 2339
LPPGWEEK + +G+PY+VDHNT+TTHW RP
Sbjct: 186 LPPGWEEKKTPDGKPYYVDHNTKTTHWERP 215
BLAST of mRNA_P-lacustris_contig986.16158.1 vs. uniprot
Match: A0A7S2TXM3_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TXM3_9EUKA) HSP 1 Score: 61.6 bits (148), Expect = 6.880e-6 Identity = 42/139 (30.22%), Postives = 70/139 (50.36%), Query Frame = 3
Query: 972 QTMSVPKSNHSLFVMVKEAKDLKKVQIIGRQDPYLKLWVGRAGTKVKTKVHVDGGKLASWNESFLFNLENVDEEECLHFEVKNKNVTDSTTIGMGKTPL--------RHFGPTAKATWHKIYCVKGKLAGEVLLEGRVD 1364
Q ++P N L + + A DL++VQ++G+QDPY+++ + + KTKV DG + WN++ +EN D + + V NKNVT TI + P+ H+ P K H+ AG++LL + +
Sbjct: 18 QPPTMPNYNGKLILSLVRANDLRRVQLLGKQDPYVEVVYKK--DRRKTKVAKDGDRSPVWNQALDVKIEN-DAQPYVTLNVINKNVTLDETIATLRVPVAVLVSSEAEHWIPLFKEEQHR------SKAGKLLLSAKFE 147
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Fungi |
| Seed ortholog score | 62.4 |
| Seed ortholog evalue | 6.4e-07 |
| Seed eggNOG ortholog | 4920.XP_004199611.1 |
| Preferred name | hulA |
| KEGG ko | ko:K10591 |
| KEGG Pathway | ko04011,ko04120,ko04144,ko04530,ko05169,map04011,map04120,map04144,map04530,map05169 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000151,GO:0000209,GO:0003674,GO:0003824,GO:0004842,GO:0005488,GO:0005515,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005739,GO:0005768,GO:0005794,GO:0005886,GO:0005933,GO:0005934,GO:0005938,GO:0006325,GO:0006333,GO:0006355,GO:0006357,GO:0006403,GO:0006405,GO:0006406,GO:0006464,GO:0006508,GO:0006511,GO:0006513,GO:0006611,GO:0006807,GO:0006808,GO:0006810,GO:0006873,GO:0006885,GO:0006886,GO:0006897,GO:0006913,GO:0006914,GO:0006996,GO:0007005,GO:0007034,GO:0008104,GO:0008150,GO:0008152,GO:0008289,GO:0009056,GO:0009057,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009889,GO:0009891,GO:0009893,GO:0009894,GO:0009896,GO:0009898,GO:0009987,GO:0010008,GO:0010467,GO:0010468,GO:0010498,GO:0010556,GO:0010557,GO:0010565,GO:0010566,GO:0010604,GO:0010628,GO:0010793,GO:0010794,GO:0010795,GO:0010796,GO:0010958,GO:0012505,GO:0015031,GO:0015833,GO:0015931,GO:0016020,GO:0016043,GO:0016192,GO:0016197,GO:0016236,GO:0016567,GO:0016740,GO:0016973,GO:0019216,GO:0019217,GO:0019218,GO:0019219,GO:0019220,GO:0019222,GO:0019538,GO:0019725,GO:0019747,GO:0019787,GO:0019897,GO:0019898,GO:0019941,GO:0022603,GO:0022604,GO:0030003,GO:0030004,GO:0030100,GO:0030162,GO:0030163,GO:0030427,GO:0030641,GO:0031090,GO:0031137,GO:0031234,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031329,GO:0031331,GO:0031344,GO:0031383,GO:0031384,GO:0031410,GO:0031503,GO:0031982,GO:0032153,GO:0032182,GO:0032239,GO:0032268,GO:0032270,GO:0032386,GO:0032434,GO:0032436,GO:0032443,GO:0032446,GO:0032509,GO:0032511,GO:0032535,GO:0032879,GO:0032880,GO:0032890,GO:0032891,GO:0032956,GO:0032970,GO:0032991,GO:0033036,GO:0033043,GO:0033157,GO:0033365,GO:0034067,GO:0034517,GO:0034613,GO:0034644,GO:0034762,GO:0034763,GO:0034765,GO:0034766,GO:0035091,GO:0035973,GO:0036211,GO:0042176,GO:0042221,GO:0042304,GO:0042493,GO:0042592,GO:0042886,GO:0043130,GO:0043161,GO:0043162,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043269,GO:0043271,GO:0043328,GO:0043412,GO:0043632,GO:0043900,GO:0044070,GO:0044087,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044433,GO:0044440,GO:0044444,GO:0044446,GO:0044448,GO:0044459,GO:0044464,GO:0045184,GO:0045324,GO:0045723,GO:0045732,GO:0045807,GO:0045834,GO:0045862,GO:0045893,GO:0045923,GO:0045935,GO:0045944,GO:0046822,GO:0046825,GO:0046831,GO:0046889,GO:0046890,GO:0046907,GO:0046999,GO:0048259,GO:0048260,GO:0048518,GO:0048519,GO:0048522,GO:0048583,GO:0048585,GO:0048878,GO:0050657,GO:0050658,GO:0050789,GO:0050793,GO:0050794,GO:0050801,GO:0050810,GO:0050896,GO:0051028,GO:0051036,GO:0051049,GO:0051050,GO:0051051,GO:0051128,GO:0051130,GO:0051168,GO:0051169,GO:0051171,GO:0051173,GO:0051174,GO:0051179,GO:0051193,GO:0051196,GO:0051223,GO:0051234,GO:0051236,GO:0051246,GO:0051247,GO:0051252,GO:0051254,GO:0051276,GO:0051285,GO:0051286,GO:0051453,GO:0051493,GO:0051603,GO:0051641,GO:0051649,GO:0051716,GO:0051865,GO:0051952,GO:0051953,GO:0051955,GO:0051956,GO:0055067,GO:0055080,GO:0055082,GO:0060255,GO:0060341,GO:0060491,GO:0060627,GO:0061136,GO:0061630,GO:0061659,GO:0061912,GO:0061919,GO:0062012,GO:0062013,GO:0065007,GO:0065008,GO:0070086,GO:0070201,GO:0070647,GO:0070727,GO:0071166,GO:0071214,GO:0071426,GO:0071427,GO:0071478,GO:0071482,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071944,GO:0071985,GO:0072594,GO:0072665,GO:0072666,GO:0072671,GO:0080090,GO:0090066,GO:0090069,GO:0090087,GO:0097708,GO:0098552,GO:0098562,GO:0098588,GO:0098657,GO:0098771,GO:0098805,GO:0099568,GO:0099738,GO:0104004,GO:0106118,GO:0120032,GO:0120035,GO:0120113,GO:0140096,GO:1901564,GO:1901565,GO:1901575,GO:1901800,GO:1902494,GO:1902680,GO:1902930,GO:1903050,GO:1903052,GO:1903076,GO:1903077,GO:1903326,GO:1903362,GO:1903364,GO:1903506,GO:1903508,GO:1903789,GO:1903792,GO:1903827,GO:1903828,GO:1903959,GO:1903960,GO:1904062,GO:1904063,GO:1904375,GO:1904376,GO:1905475,GO:1905476,GO:1905529,GO:1905530,GO:1905532,GO:1905533,GO:1905708,GO:1990234,GO:2000058,GO:2000060,GO:2000112,GO:2000197,GO:2000200,GO:2000203,GO:2000232,GO:2000235,GO:2000238,GO:2000241,GO:2001023,GO:2001024,GO:2001141 |
| EggNOG free text desc. | E3 ubiquitin-protein ligase |
| EggNOG OGs | 38CB4@33154,3NWRW@4751,3QKXA@4890,3RSNY@4891,47C9Z@766764,COG5021@1,KOG0940@2759 |
| Ec32 ortholog description | C2 domain |
| Ec32 ortholog | Ec-19_003310.1 |
| EC | 2.3.2.26 |
| COG Functional cat. | O |
| Best tax level | Debaryomycetaceae |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko01000,ko03029,ko04121,ko04131 |
| Exons | 8 |
| Model size | 3431 |
| Cds size | 1368 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622817417.2063348-UTR-P-lacustris_contig986:23334..24420 | 1622817417.2063348-UTR-P-lacustris_contig986:23334..24420 | Pleurocladia lacustris SAG_25_93 | UTR | P-lacustris_contig986 23335..24420 - |
| 1693495052.2658882-UTR-P-lacustris_contig986:23334..24420 | 1693495052.2658882-UTR-P-lacustris_contig986:23334..24420 | Pleurocladia lacustris SAG_25_93 | UTR | P-lacustris_contig986 23335..24420 - |
| 1622817417.317729-UTR-P-lacustris_contig986:32820..33797 | 1622817417.317729-UTR-P-lacustris_contig986:32820..33797 | Pleurocladia lacustris SAG_25_93 | UTR | P-lacustris_contig986 32821..33797 - |
| 1693495052.3660629-UTR-P-lacustris_contig986:32820..33797 | 1693495052.3660629-UTR-P-lacustris_contig986:32820..33797 | Pleurocladia lacustris SAG_25_93 | UTR | P-lacustris_contig986 32821..33797 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622817417.2187579-CDS-P-lacustris_contig986:24420..24454 | 1622817417.2187579-CDS-P-lacustris_contig986:24420..24454 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig986 24421..24454 - |
| 1693495052.2834797-CDS-P-lacustris_contig986:24420..24454 | 1693495052.2834797-CDS-P-lacustris_contig986:24420..24454 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig986 24421..24454 - |
| 1622817417.2308571-CDS-P-lacustris_contig986:25061..25122 | 1622817417.2308571-CDS-P-lacustris_contig986:25061..25122 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig986 25062..25122 - |
| 1693495052.2931526-CDS-P-lacustris_contig986:25061..25122 | 1693495052.2931526-CDS-P-lacustris_contig986:25061..25122 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig986 25062..25122 - |
| 1622817417.2445884-CDS-P-lacustris_contig986:25329..25578 | 1622817417.2445884-CDS-P-lacustris_contig986:25329..25578 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig986 25330..25578 - |
| 1693495052.3028347-CDS-P-lacustris_contig986:25329..25578 | 1693495052.3028347-CDS-P-lacustris_contig986:25329..25578 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig986 25330..25578 - |
| 1622817417.2558553-CDS-P-lacustris_contig986:25954..26520 | 1622817417.2558553-CDS-P-lacustris_contig986:25954..26520 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig986 25955..26520 - |
| 1693495052.313156-CDS-P-lacustris_contig986:25954..26520 | 1693495052.313156-CDS-P-lacustris_contig986:25954..26520 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig986 25955..26520 - |
| 1622817417.2680767-CDS-P-lacustris_contig986:29602..29767 | 1622817417.2680767-CDS-P-lacustris_contig986:29602..29767 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig986 29603..29767 - |
| 1693495052.3226628-CDS-P-lacustris_contig986:29602..29767 | 1693495052.3226628-CDS-P-lacustris_contig986:29602..29767 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig986 29603..29767 - |
| 1622817417.2796164-CDS-P-lacustris_contig986:30872..30964 | 1622817417.2796164-CDS-P-lacustris_contig986:30872..30964 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig986 30873..30964 - |
| 1693495052.3321211-CDS-P-lacustris_contig986:30872..30964 | 1693495052.3321211-CDS-P-lacustris_contig986:30872..30964 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig986 30873..30964 - |
| 1622817417.2910457-CDS-P-lacustris_contig986:32170..32299 | 1622817417.2910457-CDS-P-lacustris_contig986:32170..32299 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig986 32171..32299 - |
| 1693495052.34543-CDS-P-lacustris_contig986:32170..32299 | 1693495052.34543-CDS-P-lacustris_contig986:32170..32299 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig986 32171..32299 - |
| 1622817417.3032002-CDS-P-lacustris_contig986:32748..32820 | 1622817417.3032002-CDS-P-lacustris_contig986:32748..32820 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig986 32749..32820 - |
| 1693495052.35462-CDS-P-lacustris_contig986:32748..32820 | 1693495052.35462-CDS-P-lacustris_contig986:32748..32820 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig986 32749..32820 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-lacustris_contig986.16158.1 >prot_P-lacustris_contig986.16158.1 ID=prot_P-lacustris_contig986.16158.1|Name=mRNA_P-lacustris_contig986.16158.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=456bp
MSVPKSNHSLFVMVKEAKDLKKVQIIGRQDPYLKLWVGRAGTKVKTKVHV DGGKLASWNESFLFNLENVDEEECLHFEVKNKNVTDSTTIGMGKTPLRHF GPTAKATWHKIYCVKGKLAGEVLLEGRVDRRCDGRMHYGYGCLLVFCDPP RYSPEPPSCSLIIPPPSPPPPFLYCPKSMLSLVLGAVSHPARRTQSAASI SPPMSSYASMPYSQHPSSGYPGSPIGYSGSPPSSAPVYGNHRPSASHGGY QPSSVPALGGHRPTASDGGTRPPSAYGGAQAPSPSGGCGAAQPPASAYGG LGGGAGSSTAQRNPNAVYYGPAVGGGGGGGGAGSNGRSNSQGGASSPTMS LNWGASTAAQAAQRGSTASVPYPTQWNQAAQSASTAVPYHAPSAPPAPSA PPAVAPAAASAYANGGGVHDRPLRLPPGWEEKVSSNGRPYFVDHNTQTTH WIRPV* back to topmRNA from alignment at P-lacustris_contig986:23335..33797- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-lacustris_contig986.16158.1 ID=mRNA_P-lacustris_contig986.16158.1|Name=mRNA_P-lacustris_contig986.16158.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=10463bp|location=Sequence derived from alignment at P-lacustris_contig986:23335..33797- (Pleurocladia lacustris SAG_25_93) GGGGATACATGATTGATTCGAGTTGATCGAGGTTGCAATCTGAATCAAGG
TGGAAGAATGTTTGGGAAGAAATACTCGACTCTTTCAGGTACGAGATTGA
TCGATTAATCGCTTGATTGTTTGGGGAAAACCAATGTCCATCTCCAACAC
CCCGTAGAAAGCCACACATCCTGACCTGAGCCGCATATTTCTTACGAAGC
CTCCCACTTTTTTTCACGCGCGGGGTAATGTGCCCACCTTCGTTGAATTG
CTGCTGGTACGCGGGTGGATTTTTGTTCTAGCCCCATCGTGATGCTTGGC
GAGTCCAAGTGGAGATAAAAAAAAACGCCTCGTTTCTCTTGGAGGATTGT
TTGGTGGCGCTCTCTGACCAGATGCATAGTTGATCGTTCACCGTTGAAGT
ACGGTTTGCTGCCTTTCACCTACACTCAACCGCCCCATCGTAAATTTTTG
AATATTGAACATTGCACCCCTTCGTGTCAGCGTGTGTTGTAGCAGAGGTA
CATACAACGCCCCTCGGCGTAGCGCGAGAGGGCGACATAGCAAGTCGTAA
CGGCAATTGTGAGCCACCCAGGAGGTTACCCCACGAATTGTCAGGCCCCC
TTGTTGTCGCACGCCCTGTAGCTGAGGCTCTCGAGCATTCAAAGCTGCTG
TTCTCATTGCCCCGCCCCCTCCTCTATATGTTGTTCCTCCTCCCGTTCTA
CATCCTCGCCGTAGTTGCTGTTGTGTAGACGGCCCAAAGGAAAAAGTACG
CCTTTTTGCTCTCGAAAGGAGGGAGAGGGGGAGGAGGACGAGGAGCGGGA
ACGCCTATCGCTCAGAGCTTGAACATAAGTGTAACTCCCGCAAGGCTCAC
AGAAACTCCCAGCGGAATACGACACGAGCGAAACACGCAGAGTGTGTGTG
GACGTTCTCCCAGCAAAATTTTTACAAAGGTGTGCTCGTGGCGAGCCGGA
CGGACCTGAGTCAGACACCACCAAACCATGTCGGTGCCGAAATCTAACCA
CTCGCTGTTTGTCATGGTCAAGGAAGCCAAGGATCTCAAGAAGGTCCAGG
TAACGTTCGTGTAGGTTGCGGGTGGGGGAGGGGGGCTATATTTTGTATTT
TGTTTCTCTCGCCTTGTCGCGTGTGGCTGTTGAATAGTATCTGCCTTGCA
GGCGCTTGGACAGCAGTACATGGACGGCTCCGCCTTTCGTGGCGAGCCTT
TTTTGTGTGGCCCTCTGCTCGTGGCAAAAGCTCTCACCTCGTTCGCCGTC
GCCGGTGTGTAAGTGCTGTTCTTACTTTGGTACCCAGCAGTAATGATATT
CATCCGTCCAGGCCCCCTTCGCTCGGTGGATGAGAGTGCGTGTTTTTTTT
TCTGTCCGTCCGCGTAGGCACCTCCTTCCCTTTCTGTCAATGCGTCTTTT
CAACTTTCACATCCTTTTCTGTTCCTTCTTCATGTGCAGGCCCACCGCTC
TCGTTTTCCGTCACCGTCTGGTTTCACATGTTTCACGTCCCTCGCCAGAT
TATCGGCCGCCAGGACCCCTACTTGAAGCTCTGGGTTGGGCGGGCGGGCA
CGAAGGTGAAGACCAAGGTGCACGTGGACGGCGGAAAGCTCGCCAGCTGG
AACGAGAGCTTCCTGTTCAACCTTGAGGTGTGTTTGTGTTTCTTGAGCTA
CGCTACCTAGCATCGACCGCGCCAACCGGCTGACCAAAGAACAGACAGAC
CTCAGTCCTTAGCGGGCCAAAGAGCGCTAGAACATATCCTACGCCCCGCG
GGCTCCCCTGGAAGGTGTGACGTGTGTGTGTGTTCTGGTTCGCAAGATTT
GTTTTCGTTCTGTGATGCGGTGGTGTCCTCTGAATGATAAAGTCGTCGTT
GACCTATTGAGCCAAAATCCAAGAACCGCTCATTTTCACACCACACACGT
CTAAATTCTTCCCATTGGTAATGCCCTTAGCCCAAACAGATCATGCAGTA
TTAGCGACACCCAAAGCCACATAACAGTTATACGTATGGTGCTATCTTGC
TCGGAGTTGGAGTGGCGGGTGTGCTCCATCCAGAGGTGTGTGCGTGCACT
CGACGAGTGGTTTCAATAACCCAACAAACGGATGCCATAACCAGGTGGAC
GCAAATGTTGCACTTGATGCGATCGAACCAATCGTTTTCCCTCCCCTATG
TCAAGCAAGGCCCCATTTCAACTCATCCCGCCGAGCACTACTCCCTGCGC
GAAGCCCGTGCTTGTGTTCGCTGTCATTCGCGCAGCAGCCTTTTGCTGCA
ACAACCAAATAAAAAAATGAAATAAAAATAAAGAATGAGCGTGTCAGCTT
CATGCAAGCAACGAGATCAACATCATTGTCAGCACTAAAGAAGTCCTAAC
AGCTAAGGTCAGGTCGCCACCATTAACATCGATAACGACAACTAAACTCA
ACGATGGAGTCCCGCCTGTTCCAAAGTCCTCGTTGATATCATTTCTGGGG
GCTGGTGTGTCTCTTTCGAGGCCAGGTGGTGCCGTGTGTTGCAAAAAAAA
ATCATTCCTAGGGGTAGGGGTATCTCGTTCCTTGTTTCCTGTCCCTACTC
CCAATCTAGGGGTGTGTCGTTGTGCTGTGCGATTCGGAGGACGATCCTCG
TGGTCACCCCACGGCGGTTCAACAACCTTCCTGACTATTAATTCTTCCCC
TGCACCCCCCTGCAATGAGCCCCCAAGTTTGATGCACCTGCACCGCCGCG
TTGGACTCCTTCCCTCCCTCAAGGCCTGCTCTCTTGGGCGTGCGTGTCTC
CCTCATTCCCCCCGACCATTTCTATCCTCTTTCTTGACTTGCTGCCGCCC
TTGTTTTGTCTGCGTTTGTCATCCTTGGATAAGAACGTCGACGAGGAGGA
ATGCCTCCACTTCGAGGTCAAGAACAAAAACGTCACGGACAGCACAACCA
TCGGCATGGGGAAGACCCCTCTCAGGTGAGCCTGAGAGCTTTTTTTTTCT
TGCAATGCTCCGGCAAGTCCAACGTCGAGGGAGGTGCTGCCGCGGCCCAC
ACGAACTGTGTCCACGCTTCGGCGTAGAGTAGTGAGCGCATGTAGTTCTA
CCGGAGGCGCTTATCGGGCGCCAGGCATAAGACCCTCTCTTTCACAAGGA
GCTAGCCGACCATAGAACCGGCCACGCTTGTTGTGTTCGTCTCTTTCTCG
ACCTTGCCGTGGTTTCTCTGACGCGGGCTCGTTTTTTTGCGGCGTAACTC
TTGACGTAAAATTGAAGCAAAGGTTGCCCCGAACGACGGCAGTACTTGTA
GAGAAAAAAGGTGACGCAGCACGAAAATGTTGAGCTATTTTCCTGCGGAG
TGGCAACGGCCGCTTCGCAATAGTCAACCTGCTGTCCCGGCGTACGTGGG
GATGTGAGGCCCATGCTCGAACTCGAAGATTAAGACTCTCCCACCCGCCG
CGTCCACGCGATCCGCTGTAAAACGAACCGGAGGCAAAGCTCATTATTTG
GTTGCTTGAACAATGTGGCGGGCAGCGAACGGTGATCGGCCGGGTAGAGC
AGAGTGCGAGTGTGGTGGTGACTGGCGGTGTGCAAGCGTCGGACGCCGCG
GTTGCCTGCCGGGAACATGTCTTGCTTCCCTGGCCGATGCGTCTATTGTG
TCGTATCTCTTGCGACCTTCTCCTAGCGATGGTTGGTTCAAGTCTTGCGA
CCTTCTCCTAGCGATGGTTGGTTCAAGTATTGCGACCTTCTCTCCGCGAT
AGTTGGTTTAAGTCTTGCGACCTTCTCCTAGCGATGGTTGGTTTAAGTCT
TGCAACCTTTTCTTCGCGATAGTTGGTTTAGGAGTGGGATCAGACTGCTT
TTCTCCGTGCTCTTTTTCGAGCGGACGCCGGCTCGAGACGTGCTACTCGA
GGTGGCACGCAACCTCACGCCGAAAATGACCTTCGCCCCGGTGTTTTCGC
ACCCTCTGGGATAACTACGATGCTTTGCGGAAATCGAGCGATACGATTAC
GCTCTTCCTTGTCCAGTTCTCTCACCCCTGTGCGATATCTCGAAAACGTG
CGGAACGGTGCCTACGCTCTGTGAAACAAGGCATTTTGGACCGACGGCGA
AGGCTACTTGGCACAAGATCTATTGCGTCAAGGGGAAGTTGGCGGGGGAG
GTGCTGCTGGAGGGGAGAGTGGACCGCAGGTGCGATGGCAGGATGCACTA
TGGCTACGGCTGTCTTCTTGTTTTTTGCGACCCGCCGCGGTACTCGTGCA
TGTAGGACCTGTCTTGACAGCACATGCATTCATCTTTCCAAGCACTTGCT
GCTAAGCACCCTTAATCCTTGTTGCGCTCATCCAGTTGTTGCTGAAGCCA
CGGTGCCCCCGCCCCCCCTCCCCGGGTTTGGACAGTACCGACGCTGCATA
GGCCACCACTGATGCATACTTGATAAGATCGAACTCCTTGGAGACATGTG
CGACTCGCAATACACTGATCTGTTTTGAGGTAGCAGGCCTACGACTCGGT
AACTCGATAGAGGAGCTTTGAGACTGTTGAGGGACATGGGAATCAGAGGA
AGCATGTGGAAAACGGTGGAAAATGTGACCGGCCGCGACAAGTGCGGTGG
TGAAGAACGGGGCAGCAGTGTCTAAATGCGTTGGTGTTTAGATCCTTAGA
TACTAGCGACGAGTTGCACAGGTATGAGAGCTGTCGCCCAACGTTGATGT
TTTCAAGGTCACAAGGTTTACGCGAACGAGAAGATGGTACATGTACCCGT
TGAAGAAGCTCCGCACGGAGCCAAGGTCGGGGGACAACAGCGTCAGGACG
GGTGTTTTCAGATGATTTCTCATCGTGGGGATATATCGGAAACGCTGGGA
GTGTGCTCCTACAAAGAAGTAGAGAGGCACACCAGAGTACAGAAACACGA
AATGGAGATTGACAGCAAACTAAACGTGATAAAATGCAGGCGGTCAATTG
TATTGAGGGCAAAGGATAACCCCGTATTGCTCGAGCAGAATGGGGGAAGA
GGACCTGCGGATTGTAGAGAGATTGATGTACCTTGGAGGAGATATCTCCA
AAACCCTGCTCGTCGGATGGGTGCACACATAGATAACAACGGTGCCGGGT
AAAGACTAAGCCGCGTAGATAAGGCGAGTCGGAACCTCGCAGACTCGCAC
CTGGACACCAAGACTGCGCGATGCATTCTGCAGAATATGATGCGTAACAG
TAGTACCAAAGCTTTAAGCTTTAATCTAGGAATTCAGGGCAAACGAGCAT
GGAAGGGAACGGACGCGCAAGTTTGTCGAGCAATTGGAAACAGCGCAGAT
GGCAGATGGCGACAGCCAATAGTGGATCGATAGGTTGCTCGACGGCAACG
AGCACAATGGTTCTTCGGGAGGAACGCGGAACGTTCCGCGGAACGCACCC
AAACAAGGAAGTAGGGCCTGAGGACGTGCTGTAGAAATGGCGACATGAGG
CATTCATTGTGGAGGGGCTAGATGCCGGCGAGACGATTGCCAGTTGTAGT
TGGGTATTGAAGAGGGGGGTATGGAAAGGTAAAGAGAGACATGGTGGGAA
CACGTGCTACAGCTGGGAAAGATGAGTAAAGAATGAAACGAGGCCAGAGA
GAACCATGGAAGAGTAACCGGGGACGGAATCCTTGGGGGGGGAAGGGTAC
AAGGCGCCACGGAAAGGATAGAGATGAGAAATAAGGGAGAGGTATCTAAA
AGTTGGCTGCGCGTAGAAAGAAGGTACGTAATGGGGAACACCTGGAGTCT
TACAGGAAGCTCTCAAGAAGACTGGGTACTGATGTATTGCCCCGATGAAC
TGTGTGAAAAAACTGAAACACGAGTTGCGAGAATGTGGAGGACTCGAACT
TGTCGGACCAGAGGAGGAGCTACCTTTAACAGTGGCAGTGGTAGAGGGGA
AAGAAAATATGGCGCGAAGACGGGCCCATGTACGTGGCAAGGCAGAAGAG
AGCAGACCCGCATCATTGGGGAAGGTTAACAGTGTAAAGAAGTAGGCCAG
GCTCTCGGCAAATAGTGATTGAGTGGCTTTGACATGACGGAATGCGGTAA
AGCTAGACTGCAGCGCGAGAGCAAAGCGTTACCTCGAAAGATGATTGGTA
GCCACAAGACGAGACTAGCAAAGGGAGGAAGCCAAACTCATGCATGCAGG
AGAATGGATACGCGACCGAAGCTCACAGAGAGCACGGCTGTTGGGGGTGT
CCCTTTATGAAGGAGTATCGATACCTCCATCTCGTAAGGGATGCGTGGTC
AACGGTAACATGACTGCAGAAAGCAAAACATGGGTATGCCCTCCCGCGAT
GCCCCGTCCTGAGGAATGCGAGAGAGCGAAGGATTCCTTGCGTGCAAGAG
GAACGCGAGGCCACCCAAGCTTTGGCGGCGTCTTTGATTAGGTATGAACT
AACTGTGCTCCGACCTACGTGTCAATGGCCAAAACCTCTAACGACAACCA
TCTAACACGCAAGCTTTCCCCCGTTCCACCTTATTCCTTGCGGCGTGGCT
CCTGTAGGATGTCGACCCAGGGAACATCGCCACCATGGCCGAGACCCCTT
TCACCCAAGACACACCAGGTCAGTGATTCGCACCAGCAACGGCGAGCGGC
GGGGGGAATCCCTCTCTCTTCCTGAGGGGGCGAGATTGCCCCCAAACATC
CAAACAACGTGCGCAAGTGTTCGATTGTCTTTGTTGGCTCCGCACCAACG
AGACGGGGGGAGTTGCGTTGCGGGTTATGGCGTTATGGTGTTCCCCAGAT
TCTGGGCCGGACGGGATGGTTTCGGGATGTAGACTCTGTATGGGCTTGGC
GAGCCTATATGACCGCAGTTCATTCCGGACCCCGCGACGTGCACACGAGC
TGAGTTTATGTGTACGTGTCCTCTTTTTGGGGGTTCTGGTTGGAAGACAT
TTAGGTATGGCTTAAAAGAGACCCCCGGAGTGTTCAACTCCGCCCCTTTG
TTAGGCCACTCAACACGCACACACACCTTTTCCCTCCCCGTCTCTCCCCC
CTTTGTCTATCTATTGTCGACACCGGTCGCATGTTGGAAACGTTCACGTG
TCGTCACGCGTGGCGCACAATCGGCGCACGGGGGACACCAGGTGACACAA
ACGCGCGCAGGGGATCGTCTTGCTTGGCATCAAATGTTTAGTGCAACGCT
TCATGTTGTTGTTGCTGGACGTGTCTGCGTGTTTTCGTGTCCCAAATGCC
TCAAGCCCGTTCAACGCGTGGTCACCGTTTTTTTCAACGCCATACCTGCG
GCTAGCTCATCGGGGTAAGAACATGAAGCTCTACAACCATCCGGTACTAG
TTGCTCCCGCTTCTTTACCCTGGGAAGTCCGGAGCCCCCCTCATGTTCCT
TGATCATTCCTCCGCCGTCGCCCCCCCCCCCGTTTCTGTATTGCCCGAAA
TCGATGCTCTCACTGGTGCTTGGGGCGGTGTCCCACCCTGCCCGCCGAAC
GCAGTCGGCAGCATCTATCTCCCCCCCGATGTCCTCCTACGCCTCCATGC
CCTACTCCCAACATCCATCATCGGGGTATCCCGGTTCTCCAATAGGGTAC
AGCGGCTCTCCGCCATCGTCAGCACCTGTTTATGGCAACCATCGGCCTTC
AGCATCGCACGGGGGCTATCAGCCATCCTCAGTCCCTGCTCTCGGCGGCC
ATCGACCTACGGCATCTGACGGTGGCACGCGACCCCCATCGGCGTACGGC
GGCGCTCAAGCCCCGTCTCCATCAGGCGGGTGCGGCGCCGCTCAACCACC
AGCATCGGCATATGGCGGTTTAGGTGGCGGAGCAGGTTCATCAACAGCAC
AGCGAAACCCGAACGCCGTGTACTACGGTCCTGCTGTTGGCGGCGGCGGC
GGCGGCGGCGGAGCGGGTTCGAACGGCAGGAGCAATTCTCAAGGTGAGGC
TTTGGCGTGGAAAGGACCGGGGAACAGAGTATTGCCTTGGTTGTTGGTTG
TGCCGTCGTCGTCGTCGTCGTCGTCTTTGTCGTATTATTCGCGAGGGTGC
GTAGCGGGTCGCATATTTCGTTGGTCTTGGCCTCGTACAGGCACGCCGAC
ATCAAAACCCAGCTTCGCTCGCCCCCCTTGCACTCCTGAACCGGCACGGC
TAGAATAAAACCGTCTTTTTCTCCCTCTCTCTATCTCGAAACTCTCGATC
CAGGTTCTACGACTCGCCTCCCCTTGCCTCCCTGTTCGCGCCCGTACCCC
GCCCACGCTTGCTCCCCCTCGGACCATATACAAATGTCCCCGGTGGACGG
CATCCGTCGCTTTTCGCAGGAGGGGCTTCGTCCCCGACCATGTCGCTGAA
TTGGGGTGCTTCTACGGCGGCCCAAGCGGCGCAGCGAGGGAGCACAGCGT
CGGTACCTTACCCGACACAATGGAACCAAGCGGCGCAGTCTGCAAGCACG
GCTGTTCCATACCATGCACCATCGGCTCCCCCGGCACCGTCTGCGCCACC
GGCGGTGGCCCCGGCAGCGGCATCAGCGTACGCTAACGGCGGTGGCGTTC
ATGATCGCCCTCTGCGGCGTGAGTGTTTTTTTCCCAAGCAGCTTGAACAA
CAGTACCCCCATGGCAACTATACACGCACACCGAGTCGCGTCCTTCGTCC
TATTTGCTTGATTTTTGGAGGAGGTCGCCTGCCACTCTGCTCACGCTCGA
CGTTTTTGCACCTACCGGCGTTGTCCTCGGTTTGGTTTGCTCTCCGCTTC
GACCGTTCGCCGCCCGTTTCTGCAGTCCCGCCGGGCTGGGAAGAGAAGGT
CTCCAGCAACGGGCGTCCGTATTTCGTCGATCACAAGTGAGTGGCTCTTC
CGCTCGTCTCTACATTGTCTAGCAGCGGCTCCTTTTTCGTGGGTCGCAAG
ATTGGCTCATTTTCCGCTTTCGATGTTTTTGGGGTGCTTTTGCATGCTCT
ACATGCCACGTAGGGTCAGCCGTTTCGGAGTGTTATCTTCTTCCGAGTGG
ACTGGGTGAAGCACTGTCTATCGTTCTCGCACGCCTATCGGAACCGTTTC
TCTCCCAAGGCCAAGAGCTGTCCGATCTCTCCCCGTTTCCGCTTTCCCCT
AAACAGAACAGTGACCGCACAGCAGCCCAAGACAAGAGTACCGATGGGGT
TTCCAACGCATGTTTGAGAGAAGCAGTCGCCAACAATCACATTTTGAGTT
GTCAGCGCTTCGCTGACTTTTCGGGTGGTCTGAGGGCTGTAAATAATGCC
CTGCAGATTGACTTTTCCCTCGAAGCTTCCTGGGGTAATGCCAGCTGCGT
ATCCGGCGGGGCACAGGCCCCGACATATGTACTGGCGCCCCCTCTCTGAC
CAAAATCCCTGTCCCCTCCTTGACTGCCGCGTTGCCCCCATATTTCCCAC
CCGTTTGTTTTTTTCCGTCTCCGGTGCCGTTTCTGGTGGGCAGTACACAA
ACAACGCACTGGATCAGGCCGGTATGAATAGAGCTATCTACGCTCTCTTC
AACCGCTTAGCCGGCAGCCGGCCAGCCTGTGTGCTCGAGTTGTGCCGGTG
ATACCGGTTTTTCGCGCCTGCCACCATGGGTGCGGGCGTCACCCACCGTA
CACGCTTGGGAGGGGCATCAAGTAGGCGCGCGCATATGTTCGCTTGGTTA
CATGAGCTATTTCGGTGTTTAATTTGGATGGTTTGATCCCCCTTACTTCC
TCTACTGCATTTCGCAGGAAAGGAGAGGTGCGAGGCCGTTGTACTGAATT
GCGGGAGAGGGATAGGGGTTCAATTAATTTGATCTGCATGTGTGCAGGCG
AGTGCTGCAGTTAGCAAGCACCCCCGCTCCAGCGGCGATATTTTGCGGTG
TGTTACCTCAGAGATTCCAGAGTAGGTTTGGTGCGGTTGTGCGAGAGGAT
GATTAGTCTTCGGGAGGTCGGTGGGCGTGGCGTGTAGATGGTCCGTACCT
AGCTGTCATCCGAGGTTGTATTTTCTAGATGCTCTAAGGGAGTTTGTCGA
TTTTTTCCCCGTCCCCGCGAGCGGTTGCCCGCGTTTCGTTTCCCATGCAA
GCGTGCCGGTGCGGCGTGTTTAGAAGAGCTCGGTCGTGTCGTATTGGTGT
AGGTTGGGAGCTCCACTGACCTTGCTTGGTGTTGGTGTAACGCTCGACAA
CAGCTCTTTTTTGTTCCTTTTCCTCCGAAATCGTAAGGCGGCGTTATGGC
CCCTTGGGGCGAGGTGTTGTTTTCAAGGGGACAGAGGGACAGAGGAATCC
GCAAGGTTTCATCCATATCAATGCTGTTGTTGCCTCTTGCTGACGTGTGT
GACATTACTGTATAAGAGGAGGGGGGAGATATATATATATGTACAATAAG
GCTTTGCCAATGTGTCAGTCAGTATTTTATCCCCGCGTTCCAAAGCTAAG
GCGTCACGACTGTCGGTCGCTGCTTTCGCCTGTTGCTTGTTTGGATCTTC
CTGACAAGGTTAATATAATGATTCATGAATTAGTTCCGAATTTGAGACAA
CCACAGGTGATAAATAGGTCGAGAGCCAGCCGACCAAATCATGTTGCCTA
CCGCAACGCAAGT back to topCoding sequence (CDS) from alignment at P-lacustris_contig986:23335..33797- >mRNA_P-lacustris_contig986.16158.1 ID=mRNA_P-lacustris_contig986.16158.1|Name=mRNA_P-lacustris_contig986.16158.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=2736bp|location=Sequence derived from alignment at P-lacustris_contig986:23335..33797- (Pleurocladia lacustris SAG_25_93) ATGTCGGTGCCGAAATCTAACCACTCGCTGTTTGTCATGGTCAAGGAAGC CAAGGATCTCAAGAAGGTCCAGATGTCGGTGCCGAAATCTAACCACTCGC TGTTTGTCATGGTCAAGGAAGCCAAGGATCTCAAGAAGGTCCAGATTATC GGCCGCCAGGACCCCTACTTGAAGCTCTGGGTTGGGCGGGCGGGCACGAA GGTGAAGACCAAGGTGCACGTGGACGGCGGAAAGCTCGCCAGCTGGAACG AGAGCTTCCTGTTCAACCTTGAGATTATCGGCCGCCAGGACCCCTACTTG AAGCTCTGGGTTGGGCGGGCGGGCACGAAGGTGAAGACCAAGGTGCACGT GGACGGCGGAAAGCTCGCCAGCTGGAACGAGAGCTTCCTGTTCAACCTTG AGAACGTCGACGAGGAGGAATGCCTCCACTTCGAGGTCAAGAACAAAAAC GTCACGGACAGCACAACCATCGGCATGGGGAAGACCCCTCTCAGAACGTC GACGAGGAGGAATGCCTCCACTTCGAGGTCAAGAACAAAAACGTCACGGA CAGCACAACCATCGGCATGGGGAAGACCCCTCTCAGGCATTTTGGACCGA CGGCGAAGGCTACTTGGCACAAGATCTATTGCGTCAAGGGGAAGTTGGCG GGGGAGGTGCTGCTGGAGGGGAGAGTGGACCGCAGGTGCGATGGCAGGAT GCACTATGGCTACGGCTGTCTTCTTGTTTTTTGCGACCCGCCGCGGTACT CGCATTTTGGACCGACGGCGAAGGCTACTTGGCACAAGATCTATTGCGTC AAGGGGAAGTTGGCGGGGGAGGTGCTGCTGGAGGGGAGAGTGGACCGCAG GTGCGATGGCAGGATGCACTATGGCTACGGCTGTCTTCTTGTTTTTTGCG ACCCGCCGCGGTACTCTCCGGAGCCCCCCTCATGTTCCTTGATCATTCCT CCGCCGTCGCCCCCCCCCCCGTTTCTGTATTGCCCGAAATCGATGCTCTC ACTGGTGCTTGGGGCGGTGTCCCACCCTGCCCGCCGAACGCAGTCGGCAG CATCTATCTCCCCCCCGATGTCCTCCTACGCCTCCATGCCCTACTCCCAA CATCCATCATCGGGGTATCCCGGTTCTCCAATAGGGTACAGCGGCTCTCC GCCATCGTCAGCACCTGTTTATGGCAACCATCGGCCTTCAGCATCGCACG GGGGCTATCAGCCATCCTCAGTCCCTGCTCTCGGCGGCCATCGACCTACG GCATCTGACGGTGGCACGCGACCCCCATCGGCGTACGGCGGCGCTCAAGC CCCGTCTCCATCAGGCGGGTGCGGCGCCGCTCAACCACCAGCATCGGCAT ATGGCGGTTTAGGTGGCGGAGCAGGTTCATCAACAGCACAGCGAAACCCG AACGCCGTGTACTACGGTCCTGCTGTTGGCGGCGGCGGCGGCGGCGGCGG AGCGGGTTCGAACGGCAGGAGCAATTCTCAAGTCCGGAGCCCCCCTCATG TTCCTTGATCATTCCTCCGCCGTCGCCCCCCCCCCCGTTTCTGTATTGCC CGAAATCGATGCTCTCACTGGTGCTTGGGGCGGTGTCCCACCCTGCCCGC CGAACGCAGTCGGCAGCATCTATCTCCCCCCCGATGTCCTCCTACGCCTC CATGCCCTACTCCCAACATCCATCATCGGGGTATCCCGGTTCTCCAATAG GGTACAGCGGCTCTCCGCCATCGTCAGCACCTGTTTATGGCAACCATCGG CCTTCAGCATCGCACGGGGGCTATCAGCCATCCTCAGTCCCTGCTCTCGG CGGCCATCGACCTACGGCATCTGACGGTGGCACGCGACCCCCATCGGCGT ACGGCGGCGCTCAAGCCCCGTCTCCATCAGGCGGGTGCGGCGCCGCTCAA CCACCAGCATCGGCATATGGCGGTTTAGGTGGCGGAGCAGGTTCATCAAC AGCACAGCGAAACCCGAACGCCGTGTACTACGGTCCTGCTGTTGGCGGCG GCGGCGGCGGCGGCGGAGCGGGTTCGAACGGCAGGAGCAATTCTCAAGGA GGGGCTTCGTCCCCGACCATGTCGCTGAATTGGGGTGCTTCTACGGCGGC CCAAGCGGCGCAGCGAGGGAGCACAGCGTCGGTACCTTACCCGACACAAT GGAACCAAGCGGCGCAGTCTGCAAGCACGGCTGTTCCATACCATGCACCA TCGGCTCCCCCGGCACCGTCTGCGCCACCGGCGGTGGCCCCGGCAGCGGC ATCAGCGTACGCTAACGGCGGTGGCGTTCATGATCGCCCTCTGCGGCGAG GGGCTTCGTCCCCGACCATGTCGCTGAATTGGGGTGCTTCTACGGCGGCC CAAGCGGCGCAGCGAGGGAGCACAGCGTCGGTACCTTACCCGACACAATG GAACCAAGCGGCGCAGTCTGCAAGCACGGCTGTTCCATACCATGCACCAT CGGCTCCCCCGGCACCGTCTGCGCCACCGGCGGTGGCCCCGGCAGCGGCA TCAGCGTACGCTAACGGCGGTGGCGTTCATGATCGCCCTCTGCGGCTCCC GCCGGGCTGGGAAGAGAAGGTCTCCAGCAACGGGCGTCCGTATTTCGTCG ATCACAATCCCGCCGGGCTGGGAAGAGAAGGTCTCCAGCAACGGGCGTCC GTATTTCGTCGATCACAATACACAAACAACGCACTGGATCAGGCCGGTAT GATACACAAACAACGCACTGGATCAGGCCGGTATGA back to top
|