mRNA_P-lacustris_contig979.16100.1 (mRNA) Pleurocladia lacustris SAG_25_93

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-lacustris_contig979.16100.1
Unique NamemRNA_P-lacustris_contig979.16100.1
TypemRNA
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Homology
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BLAST of mRNA_P-lacustris_contig979.16100.1 vs. uniprot
Match: A0A6H5KLH5_9PHAE (PseudoU_synth_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLH5_9PHAE)

HSP 1 Score: 232 bits (591), Expect = 2.980e-67
Identity = 125/181 (69.06%), Postives = 137/181 (75.69%), Query Frame = 3 
Query:  123 AAIRGPAGCKLLLRARPWRQSRVASSCVRPPQPTTPSLREKDVLYMDNHVLLINKPAGLLSQSDRTGDLDVTALAREYVRVAASKTGDAFVALVHRLDRPVSGVMCVARTSKAAARLSESFRKRNGVTKVYHAVVAGNLTGSGTREDFLVSPDEAG----------------PSRGAVGGR 617
            A  RG A CK+L++AR  RQ+  ASS  RP QP  PS R +DVLYMDNHVLL+NKPAGLLSQSDRTGD DV ALAREYVRVAA+KTG+AFVALVHRLDRPVSGVMCVARTSKAAARLS SFR R+GV K+YHAVVAG L G G R+DFLVSPD +G                P RG  GGR
Sbjct:    4 AGTRGMAACKVLMQARVQRQACAASSRARPLQPRRPSFRVEDVLYMDNHVLLVNKPAGLLSQSDRTGDADVAALAREYVRVAANKTGEAFVALVHRLDRPVSGVMCVARTSKAAARLSASFRARDGVEKIYHAVVAGGLAGRGIRQDFLVSPDASGAVARRGRGPRTGLSSAPVRGGAGGR 184
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BLAST of mRNA_P-lacustris_contig979.16100.1 vs. uniprot
Match: D8LGZ5_ECTSI (23S RNA-specific pseudouridylate synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGZ5_ECTSI)

HSP 1 Score: 216 bits (550), Expect = 1.170e-62
Identity = 122/188 (64.89%), Postives = 137/188 (72.87%), Query Frame = 2 
Query:  587 GAVARRGRGPRTAVA-IPVTGSVGSPHTLS--TSSXXXXXXXXXXXAQTFAQLEWEAIRVSLSAAARLRCPRTGNPRTVVRVRLITGRKHQIRVQLAKMGHPVVGDTRYGRSRCQANGGTSHGSAVVPPP--GGGMESLDDRSILLHASELAVPHPTRKGTTVRAVAPPPEVWSELCGRACIEEVFGD 1135
            GAVARRGRGPR  ++ +P  G  G     +  TSS               AQLEWEAI VS S+A RLRCPRTGNPRT+VRVRLITGRKHQIRVQLA+MGHPVVGDTRYGRSR    GG +   + VPPP   G +E L+DRSILLHASEL VPHPTR G TVRAVA PP +WS+LCGR+CI+EVFGD
Sbjct:   52 GAVARRGRGPRAGLSSVPARGGAGGRLLAAGPTSSPDGK----------LAQLEWEAINVSSSSAVRLRCPRTGNPRTLVRVRLITGRKHQIRVQLAEMGHPVVGDTRYGRSR----GGDATDESAVPPPRRAGRIEPLEDRSILLHASELIVPHPTRVGATVRAVAAPPGMWSDLCGRSCIDEVFGD 225
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BLAST of mRNA_P-lacustris_contig979.16100.1 vs. uniprot
Match: A0A6L8CBW6_9BACT (RluA family pseudouridine synthase n=2 Tax=Rhodothermaceae bacterium TaxID=2026787 RepID=A0A6L8CBW6_9BACT)

HSP 1 Score: 126 bits (317), Expect = 1.150e-29
Identity = 64/106 (60.38%), Postives = 82/106 (77.36%), Query Frame = 3 
Query:  252 LYMDNHVLLINKPAGLLSQSDRTGDLDVTALAREYVRVAASKTGDAFVALVHRLDRPVSGVMCVARTSKAAARLSESFRKRNGVTKVYHAVVAGNLTGSGTREDFL 569
            L+ DNH+L ++KPAGLLSQ+D TGD DV  LA+EY++   SK G+ ++ LVHRLDRP SG M +ARTSKAA RLS++FR+R+ V K Y A+V G LTGSG  ED+L
Sbjct:    3 LFEDNHLLTLDKPAGLLSQADSTGDPDVVTLAKEYIKHKYSKPGNVYIGLVHRLDRPTSGAMVLARTSKAARRLSQAFRERS-VKKKYIALVEGALTGSGVMEDYL 107
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BLAST of mRNA_P-lacustris_contig979.16100.1 vs. uniprot
Match: A0A848XZP8_9BACT (RNA pseudouridine synthase n=1 Tax=Rhodothermaceae bacterium TaxID=2026787 RepID=A0A848XZP8_9BACT)

HSP 1 Score: 125 bits (313), Expect = 4.790e-29
Identity = 61/112 (54.46%), Postives = 85/112 (75.89%), Query Frame = 3 
Query:  246 DVLYMDNHVLLINKPAGLLSQSDRTGDLDVTALAREYVRVAASKTGDAFVALVHRLDRPVSGVMCVARTSKAAARLSESFRKRNGVTKVYHAVVAGNLTGSGTREDFLVSPD 581
            +VLY+DNH+L++ KP GLL+Q+DRTGD D+    + +++    K G+ F+ LVHRLDRPVSGVM +ARTSKAA RLS++FR+R  V K Y A+V G ++G+G RED+L+  D
Sbjct:    2 EVLYLDNHLLVVVKPPGLLAQADRTGDTDLLTQGKAFLKEKFDKPGNVFLGLVHRLDRPVSGVMVLARTSKAAGRLSKAFRERR-VEKRYLALVEGRMSGAGEREDYLLKED 112
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BLAST of mRNA_P-lacustris_contig979.16100.1 vs. uniprot
Match: A0A6N9AGQ8_9BACT (RluA family pseudouridine synthase n=3 Tax=Rhodothermaceae bacterium TaxID=2026787 RepID=A0A6N9AGQ8_9BACT)

HSP 1 Score: 124 bits (310), Expect = 1.110e-28
Identity = 64/106 (60.38%), Postives = 79/106 (74.53%), Query Frame = 3 
Query:  252 LYMDNHVLLINKPAGLLSQSDRTGDLDVTALAREYVRVAASKTGDAFVALVHRLDRPVSGVMCVARTSKAAARLSESFRKRNGVTKVYHAVVAGNLTGSGTREDFL 569
            L+ DNH+L +NKPAGLLSQ+D TGD D+  LAR Y++   SK G+ ++ LVHRLDRPVSG M +ARTSKAA RLS++FR R  VTK Y  VV G + GSG  ED+L
Sbjct:    3 LFEDNHLLTLNKPAGLLSQADITGDPDLVTLARAYLKKKYSKPGNVYIGLVHRLDRPVSGAMVLARTSKAARRLSQAFRDRR-VTKEYIVVVEGLIEGSGVMEDYL 107
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BLAST of mRNA_P-lacustris_contig979.16100.1 vs. uniprot
Match: A0A800M4B4_9BACT (RluA family pseudouridine synthase n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A800M4B4_9BACT)

HSP 1 Score: 124 bits (311), Expect = 1.260e-28
Identity = 65/119 (54.62%), Postives = 84/119 (70.59%), Query Frame = 3 
Query:  246 DVLYMDNHVLLINKPAGLLSQSDRTGDLDVTALAREYVRVAASKTGDAFVALVHRLDRPVSGVMCVARTSKAAARLSESFRKRNGVTKVYHAVVAGNLTGSGTREDFLVSPDEAGPSRG 602
            DVLY+DNH+L++ KPAG+LSQ+D TGDLDV   A++++R    K G+ F  LVHRLDRPV G M +ARTSKAA+RL+E FR+R    K Y A+V G L GSG   D+L+   +  P RG
Sbjct:    4 DVLYLDNHLLVVAKPAGMLSQADDTGDLDVVTWAKDFLRREFDKPGNVFAGLVHRLDRPVGGAMVIARTSKAASRLAEQFRQRTP-EKRYLAMVEGRLDGSGRETDWLLKTRD--PKRG 119
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BLAST of mRNA_P-lacustris_contig979.16100.1 vs. uniprot
Match: A0A7Y2C732_9BACT (PseudoU_synth_2 domain-containing protein (Fragment) n=1 Tax=Rhodothermales bacterium TaxID=2306054 RepID=A0A7Y2C732_9BACT)

HSP 1 Score: 119 bits (298), Expect = 3.540e-28
Identity = 62/110 (56.36%), Postives = 79/110 (71.82%), Query Frame = 3 
Query:  234 LREKDVLYMDNHVLLINKPAGLLSQSDRTGDLDVTALAREYVRVAASKTGDAFVALVHRLDRPVSGVMCVARTSKAAARLSESFRKRNGVTKVYHAVVAGNLTGSGTRED 563
            + E  V+Y DNH+L++NKPAG+L+Q DR+GDLD+ + AR Y+     K G AF+ LVHRLDRP SGV+ +ARTSKAAARLS  FR+R  VTK Y A+V G+   SG   D
Sbjct:    9 MSEDRVIYCDNHLLVLNKPAGMLTQGDRSGDLDLLSWARGYIERRFDKPGRAFIGLVHRLDRPASGVVILARTSKAAARLSRQFRERE-VTKRYLALVEGHPAASGALRD 117
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BLAST of mRNA_P-lacustris_contig979.16100.1 vs. uniprot
Match: A0A3M1NPK6_9BACT (RNA pseudouridine synthase n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A3M1NPK6_9BACT)

HSP 1 Score: 122 bits (305), Expect = 6.640e-28
Identity = 62/109 (56.88%), Postives = 79/109 (72.48%), Query Frame = 3 
Query:  246 DVLYMDNHVLLINKPAGLLSQSDRTGDLDVTALAREYVRVAASKTGDAFVALVHRLDRPVSGVMCVARTSKAAARLSESFRKRNGVTKVYHAVVAGNLTGSGTREDFLV 572
            DVLY+DNH+L++NKP G+L+Q+D TGD DV  L + Y++    K G+ F+ LVHRLDRP SGVM +ARTSKAAARLSE FR R+   K Y A+V G   G+GT  D L+
Sbjct:    4 DVLYLDNHLLVVNKPPGMLAQADTTGDTDVVTLGKAYLKERFQKPGNVFLGLVHRLDRPASGVMVLARTSKAAARLSEQFR-RHSPEKRYLALVEGAWDGNGTAVDHLL 111
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BLAST of mRNA_P-lacustris_contig979.16100.1 vs. uniprot
Match: A0A259TYX9_9BACT (PseudoU_synth_2 domain-containing protein n=1 Tax=Rubricoccus marinus TaxID=716817 RepID=A0A259TYX9_9BACT)

HSP 1 Score: 121 bits (304), Expect = 1.170e-27
Identity = 62/108 (57.41%), Postives = 82/108 (75.93%), Query Frame = 3 
Query:  246 DVLYMDNHVLLINKPAGLLSQSDRTGDLDVTALAREYVRVAASKTGDAFVALVHRLDRPVSGVMCVARTSKAAARLSESFRKRNGVTKVYHAVVAGNLTGSGTREDFL 569
            ++L++DNH+L++ KPAG+LSQ D TGD DV   A+ +++   +K G+ FV LV RLDRP SGVM +ARTSKAA+RL+E FRKR+ V KVY A+V G L GSG  ED+L
Sbjct:    4 EILFLDNHLLVVAKPAGMLSQGDSTGDRDVANWAKAFLKREFNKPGNVFVGLVQRLDRPASGVMVLARTSKAASRLTEQFRKRS-VEKVYLALVEGKLEGSGRLEDWL 110
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BLAST of mRNA_P-lacustris_contig979.16100.1 vs. uniprot
Match: UPI001420CA78 (RNA pseudouridine synthase n=1 Tax=Rhodocaloribacter litoris TaxID=2558931 RepID=UPI001420CA78)

HSP 1 Score: 120 bits (302), Expect = 1.800e-27
Identity = 63/109 (57.80%), Postives = 79/109 (72.48%), Query Frame = 3 
Query:  246 DVLYMDNHVLLINKPAGLLSQSDRTGDLDVTALAREYVRVAASKTGDAFVALVHRLDRPVSGVMCVARTSKAAARLSESFRKRNGVTKVYHAVVAGNLTGSGTREDFLV 572
            DVLY+DNH+L++NKP GLL+Q+D TGD DV  L + +++    K G  F+ LVHRLDRP SGVM +ARTSKAAARLS+ FR+R    K Y A+V G  TG+GT  D LV
Sbjct:    4 DVLYLDNHLLVVNKPPGLLAQADHTGDPDVLTLGKAWLKARFGKPGRVFLGLVHRLDRPASGVMVLARTSKAAARLSDQFRRRLP-EKRYLALVEGVWTGAGTAVDHLV 111
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig979.16100.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KLH5_9PHAE2.980e-6769.06PseudoU_synth_2 domain-containing protein n=1 Tax=... [more]
D8LGZ5_ECTSI1.170e-6264.8923S RNA-specific pseudouridylate synthase n=1 Tax=... [more]
A0A6L8CBW6_9BACT1.150e-2960.38RluA family pseudouridine synthase n=2 Tax=Rhodoth... [more]
A0A848XZP8_9BACT4.790e-2954.46RNA pseudouridine synthase n=1 Tax=Rhodothermaceae... [more]
A0A6N9AGQ8_9BACT1.110e-2860.38RluA family pseudouridine synthase n=3 Tax=Rhodoth... [more]
A0A800M4B4_9BACT1.260e-2854.62RluA family pseudouridine synthase n=1 Tax=Bactero... [more]
A0A7Y2C732_9BACT3.540e-2856.36PseudoU_synth_2 domain-containing protein (Fragmen... [more]
A0A3M1NPK6_9BACT6.640e-2856.88RNA pseudouridine synthase n=1 Tax=Bacteroidetes b... [more]
A0A259TYX9_9BACT1.170e-2757.41PseudoU_synth_2 domain-containing protein n=1 Tax=... [more]
UPI001420CA781.800e-2757.80RNA pseudouridine synthase n=1 Tax=Rhodocaloribact... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig979contigP-lacustris_contig979:18449..21737 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score120.9
Seed ortholog evalue5.6e-25
Seed eggNOG ortholog518766.Rmar_1191
Preferred namerluC
KEGG koko:K06177,ko:K06180
Hectar predicted targeting categorymitochondrion
EggNOG free text desc.RNA pseudouridylate synthase
EggNOG OGs1FJD9@1100069,4NFS8@976,COG0564@1,COG0564@2
EC5.4.99.23,5.4.99.28,5.4.99.29
COG Functional cat.J
Best tax levelBacteroidetes Order II. Incertae sedis
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03009,ko03016
Exons3
Model size1800
Cds size513
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig979.16100.1prot_P-lacustris_contig979.16100.1Pleurocladia lacustris SAG_25_93polypeptideP-lacustris_contig979 18565..20566 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817409.4329653-UTR-P-lacustris_contig979:18448..185641622817409.4329653-UTR-P-lacustris_contig979:18448..18564Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig979 18449..18564 +
1693495045.8897884-UTR-P-lacustris_contig979:18448..185641693495045.8897884-UTR-P-lacustris_contig979:18448..18564Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig979 18449..18564 +
1622817409.4779198-UTR-P-lacustris_contig979:20566..217371622817409.4779198-UTR-P-lacustris_contig979:20566..21737Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig979 20567..21737 +
1693495045.9357612-UTR-P-lacustris_contig979:20566..217371693495045.9357612-UTR-P-lacustris_contig979:20566..21737Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig979 20567..21737 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817409.4434896-CDS-P-lacustris_contig979:18564..187171622817409.4434896-CDS-P-lacustris_contig979:18564..18717Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig979 18565..18717 +
1693495045.9037938-CDS-P-lacustris_contig979:18564..187171693495045.9037938-CDS-P-lacustris_contig979:18564..18717Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig979 18565..18717 +
1622817409.4541812-CDS-P-lacustris_contig979:19474..196281622817409.4541812-CDS-P-lacustris_contig979:19474..19628Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig979 19475..19628 +
1693495045.9117956-CDS-P-lacustris_contig979:19474..196281693495045.9117956-CDS-P-lacustris_contig979:19474..19628Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig979 19475..19628 +
1622817409.4666598-CDS-P-lacustris_contig979:20360..205661622817409.4666598-CDS-P-lacustris_contig979:20360..20566Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig979 20361..20566 +
1693495045.926176-CDS-P-lacustris_contig979:20360..205661693495045.926176-CDS-P-lacustris_contig979:20360..20566Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig979 20361..20566 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-lacustris_contig979.16100.1

>prot_P-lacustris_contig979.16100.1 ID=prot_P-lacustris_contig979.16100.1|Name=mRNA_P-lacustris_contig979.16100.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=171bp
MAAAIRGPAGCKLLLRARPWRQSRVASSCVRPPQPTTPSLREKDVLYMDN
HVLLINKPAGLLSQSDRTGDLDVTALAREYVRVAASKTGDAFVALVHRLD
RPVSGVMCVARTSKAAARLSESFRKRNGVTKVYHAVVAGNLTGSGTREDF
LVSPDEAGPSRGAVGGRGQR*
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mRNA from alignment at P-lacustris_contig979:18449..21737+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-lacustris_contig979.16100.1 ID=mRNA_P-lacustris_contig979.16100.1|Name=mRNA_P-lacustris_contig979.16100.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=3289bp|location=Sequence derived from alignment at P-lacustris_contig979:18449..21737+ (Pleurocladia lacustris SAG_25_93)
GTTGGTGGCATCTATGCATGAACATGAGCAGAAAAATGCCTCGGTGACTT
CTTCCGTTTGGGACTTCCCCTTCCCCCCCCCACAATCTGCTGACGCCGCA
CACACCCGCTGACGACATGGCAGCAGCTATCAGAGGACCTGCTGGTTGTA
AGCTCTTGTTGCGAGCTCGTCCATGGAGACAAAGCCGAGTGGCTAGCAGT
TGCGTGCGCCCACCGCAACCCACCACGCCGTCCTTGCGCGAAAAGGATGT
GCTGTACATGGATAACCACGTGAGACTCCTTGCGCTCAGCATTTTGTGTG
GATTGCATTGGAGTCGATGCAGCAGGGATTGAGCTATCTTTGTTGTTATG
GTGCTGTGCTTACAGCCGCTTTCTTCTCTGTGATCTGGGTGGTTGGGAGG
TGTCAGCGATGCAAACAACGAGCAGTTTTCTCTTTTTGAATCACTCAAAC
GGGACTGTCATCTATTTTGTTTTCTCTCTCTCCCCCTCCATCCACCCTCT
TACCCCTCTCTCTCTCTCGCCTTCACTCTGACACAATCCCCGGTCCAGAA
GTGACGTGTCTTGAAATATTTCACTTTGAAACGTCGTGGGGAAGTACGGT
ACGATGCTCGAAAATTCGAAAATTCGAAGGCAATACCGGCTATCGCCTGA
AAGCGGTTGTATAGGCCGAACACAACGGCACACGAGGAAGTATCATGGAA
TGTAAAGGACTTCCGCGGTGCTCTGGTTCACTAAGCCCTTTACTGCTGTA
GAAGTATATCGTCACCAGCAGGAGGGTGGTATCTCTCATAAATGCTTCTC
GAGAGACCCCTGACTATTAGGGATTCCGGTATTGGAAGGTCGGCATGCCG
ATTTCATCGCCACTTCGGGGCCTGCTGTAGCTAGTGCGGGTTACCGTTCC
AATACATGGATACGGATTTCATGAGCTACACAGCATATCGCAAGGCCCAG
CGTGGGAGTTTGCACGCAAGAAGCGCGCTTAGTATTTGACGGCAGTACTC
CCTTGATTGATCCATTTGGGCGACAGGTTCTTCTCATAAACAAGCCGGCG
GGGCTCTTGTCTCAGAGCGACCGCACCGGTGACTTGGACGTGACGGCGCT
TGCTCGGGAATACGTGCGGGTGGCCGCCAGCAAGACTGGCGATGCGTTCG
TAGCGTTAGTGCATCGCCTCGATCGACCAGGTGAATGAGGGTTAAGATTT
GTCACCTCGCCTCGTGCATTGCGCCTTCAATGCACTTACAGTAAGTGCCC
TGTTCGGCCCTTGTTCATTTCTTCATGGTACATGCGTGTGCCGGTTGCGG
TGGATCATGTACACTTGGTTCACCACAAGGCTAAGTTGTCGGCTCCTTGT
GATAGCCGGAAAGACCAGGTTGAAACACATACCATGCTTGTTTCGCTGTA
TTTCTCAAGATATCACTTCAGCTCCCCCTTCAGAATGATGTTCGCGCGTT
CGCCAGCATTGAGCTGTCTGGCTCAGCGGTATTTCGTCCCTGTGTATCGA
TTTCAGGGAAAGCTAGAAGCGTCAGCGCGTAGTTCTAGCAGTGCGCTTTT
TTTAAGAGAGGTTGCTGCTGCATGCATGAAGTTGTCATAACGTGTTGTCC
CTGGAAAACGTGGGTAAAAGTTTGGCCAATCGCACTAAGGCTCCTACATG
GTGAGGGGATACAGTGCGTAGCGTCCCCATCACAGGGAACGCGAGTGACA
ATAGGCGGTATTCTCGCACTCTGAGTGCGTCCCCTCGGCAACTCGGAAAA
TCACTGGGATGATCTCCACCAACCTTGCGCGAGAAGCCTGCTTCAGAGTT
CGTACTCTCTGATACACAGCGCAGACACATGATTCGCCCTCTGATCCCAC
ACTTTCACTCATTTTCGCTGCTTTCTGCTGTCGCTTGCCCCTTTTGGCCT
ATTCTGTCATAGTCTCTGGGGTGATGTGCGTGGCTCGCACGAGCAAGGCC
GCCGCTCGACTCTCGGAAAGCTTTCGAAAACGCAACGGTGTCACCAAAGT
ATACCACGCCGTGGTTGCTGGCAACCTTACGGGGAGCGGCACTCGCGAAG
ACTTTCTGGTGTCTCCGGACGAGGCGGGGCCGTCGCGAGGCGCGGTAGGG
GGCCGAGGACAGCGGTAGCAATCCCAGTTACAGGCAGTGTCGGTTCTCCG
CACACGTTGTCAACTTCGTCATCGGCCGCGACGGCGGCGGCGGCGGCCTC
GGCGGCCCAAACGTTTGCACAACTGGAGTGGGAAGCGATCCGCGTGTCCC
TCTCGGCCGCCGCTCGGCTCCGGTGCCCGCGAACAGGGAACCCTCGAACA
GTGGTGCGTGTGCGGCTCATCACCGGGCGGAAGCACCAGATCAGGGTACA
GCTCGCGAAGATGGGCCATCCAGTTGTTGGGGACACGCGGTACGGTCGTT
CTCGGTGTCAGGCTAATGGCGGAACAAGCCACGGCTCGGCGGTGGTTCCT
CCCCCGGGGGGTGGGATGGAGTCGCTTGACGACCGGAGTATTTTGCTGCA
CGCGAGTGAATTGGCCGTGCCGCACCCGACGCGGAAAGGGACGACCGTTC
GGGCGGTGGCTCCGCCGCCGGAGGTGTGGAGCGAGCTTTGTGGTCGAGCG
TGTATCGAAGAAGTGTTTGGCGATATGTAGATAGATATGTATTCCGGAGT
ATACATTTGCGTGCGAGATGGCGAGGGTTTTGGACATGGCGATGTATTGT
TTTATCATGGAGTCCTAGATCGAATTTTGTTTCCATCTCTCCACGCCATT
TATGTGCTTCGACGATGGTGAATCACGTTTCTAACACGTACCTTGTCCTT
GGCCTTATCGAGACGTGAACAAGTGGGAGTCTGATGTTGAGGTACTCAGT
CGATAGTGGCGTTTTGTCAGACTAGTACATACTGCCGGGTTTTGTACGCA
TCCTGTTTTGTCGTTCTGCCTGCTCGTTTATTTGTTCCAGACCAAACACT
TCCTACAAAGACACGAAGAAACTAAAACGTTGGACTTAGCCACATCACGC
AACGCAAACAAATGCTCAGATGGCAGTCTTCCTTTGGTGCTTTGTGCTTT
TTCTTGAAAATGCTGCCGTACTTGCAGTATTTTCTCCTCCACATACATGT
GCCCTCCCTCGATGCTCGCAACCAGATACCAGGCAAGACGACCTTTTAAT
AATGGTATTGAAGAAAATTTTATTTTGCAGGAACCGACATTAAAGATGGA
CCACTACATGTTCTGTTACGTCCACCGCTCAGTCGATTTTAAATATTAGG
CCGTTTCTTACGCTGTGATATTTTCGGATTTTATTTGGG
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Coding sequence (CDS) from alignment at P-lacustris_contig979:18449..21737+

>mRNA_P-lacustris_contig979.16100.1 ID=mRNA_P-lacustris_contig979.16100.1|Name=mRNA_P-lacustris_contig979.16100.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=1026bp|location=Sequence derived from alignment at P-lacustris_contig979:18449..21737+ (Pleurocladia lacustris SAG_25_93)
ATGGCAGCAGCTATCAGAGGACCTGCTGGTTGTAAGCTCTTGTTGCGAGC
TCGTCCATGGAGACAAAGCCGAGTGGCTAGCAGTTGCGTGCGCCCACCGC
AACCCACCACGCCGTCCTTGCGCGAAAAGGATGTGCTGTACATGGATAAC
CACATGGCAGCAGCTATCAGAGGACCTGCTGGTTGTAAGCTCTTGTTGCG
AGCTCGTCCATGGAGACAAAGCCGAGTGGCTAGCAGTTGCGTGCGCCCAC
CGCAACCCACCACGCCGTCCTTGCGCGAAAAGGATGTGCTGTACATGGAT
AACCACGTTCTTCTCATAAACAAGCCGGCGGGGCTCTTGTCTCAGAGCGA
CCGCACCGGTGACTTGGACGTGACGGCGCTTGCTCGGGAATACGTGCGGG
TGGCCGCCAGCAAGACTGGCGATGCGTTCGTAGCGTTAGTGCATCGCCTC
GATCGACCAGGTTCTTCTCATAAACAAGCCGGCGGGGCTCTTGTCTCAGA
GCGACCGCACCGGTGACTTGGACGTGACGGCGCTTGCTCGGGAATACGTG
CGGGTGGCCGCCAGCAAGACTGGCGATGCGTTCGTAGCGTTAGTGCATCG
CCTCGATCGACCAGTCTCTGGGGTGATGTGCGTGGCTCGCACGAGCAAGG
CCGCCGCTCGACTCTCGGAAAGCTTTCGAAAACGCAACGGTGTCACCAAA
GTATACCACGCCGTGGTTGCTGGCAACCTTACGGGGAGCGGCACTCGCGA
AGACTTTCTGGTGTCTCCGGACGAGGCGGGGCCGTCGCGAGGCGCGGTAG
GGGGCCGAGGACAGCGGTAGTCTCTGGGGTGATGTGCGTGGCTCGCACGA
GCAAGGCCGCCGCTCGACTCTCGGAAAGCTTTCGAAAACGCAACGGTGTC
ACCAAAGTATACCACGCCGTGGTTGCTGGCAACCTTACGGGGAGCGGCAC
TCGCGAAGACTTTCTGGTGTCTCCGGACGAGGCGGGGCCGTCGCGAGGCG
CGGTAGGGGGCCGAGGACAGCGGTAG
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