mRNA_P-lacustris_contig91.15565.1 (mRNA) Pleurocladia lacustris SAG_25_93

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-lacustris_contig91.15565.1
Unique NamemRNA_P-lacustris_contig91.15565.1
TypemRNA
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Homology
[Close]
BLAST of mRNA_P-lacustris_contig91.15565.1 vs. uniprot
Match: D7G213_ECTSI (TLC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G213_ECTSI)

HSP 1 Score: 521 bits (1343), Expect = 9.930e-183
Identity = 266/353 (75.35%), Postives = 291/353 (82.44%), Query Frame = 1 
Query:   61 MAGSAVNAAGFVELPAGMRFYSFMFDDQHLLPGYVATGKLPAPASLLVGMAAGVVLTAMRFALDVAVFKPLARSVLGFPRRLRRTAAVPALDTLCSKSKLLSPEEVVDASTSTGLSPEEVKAYAKERRLSALEDKKIGKFKEAAWRLSVYSFLVVYALRITSGKPWLKDPELVWEDWPLGNHVDGLGTYYHVGMAVXXXXXXXXXXDTRRSDFWQMLVHHSATLFLLTFSWLSSLVRVGTLIMLCHDVADIFMETAKLFNYAQKRFHWCHLAADGFFFVFASVFGASRLYVFPKYLILSVWRTTALSDVLRHFFVSLLGTLLVLHVFWFHLIVRMVYMFVFHGVEGDIRSDND 1119
            M GSA   +G  ELP GM FYSFMFDDQHLLPGYV  GKLPAP+SL++GMA GVVLT  R ALD+ VFKPLARS+LGFPRR  R  A+PALD LC+KSKLLSPEEV  AS S+GLS EEVK YAK RRLSALEDKK+GKFKEAAWRL VY  LV+Y LR+ SGKPW KDPELVWEDWPLGN +DGL  +YHV M V          DTRRSDF QMLVHH AT+ LLTFSWL SLVR+G LIMLCHDVADIFMETAKLFNY+QKR+HWCHLAADGFFFVFA VFG SRLY+FPKYL+LSVWR   LS+V+RHFF   L TLLVLHVFWF+LI+RMVYMFVFHGVE DIRSDN+
Sbjct:    1 MVGSA-EGSGSGELPVGMCFYSFMFDDQHLLPGYVKAGKLPAPSSLVLGMAMGVVLTGARLALDMIVFKPLARSILGFPRRQNR--AIPALDHLCAKSKLLSPEEVAQASASSGLSQEEVKTYAKGRRLSALEDKKVGKFKEAAWRLVVYMSLVIYGLRVASGKPWFKDPELVWEDWPLGNGMDGLDQFYHVAMGVYWHFIIFQFWDTRRSDFAQMLVHHVATISLLTFSWLLSLVRIGALIMLCHDVADIFMETAKLFNYSQKRYHWCHLAADGFFFVFAGVFGFSRLYIFPKYLVLSVWRAAVLSEVMRHFFTGQLCTLLVLHVFWFYLIMRMVYMFVFHGVEEDIRSDNE 350
[Close]
BLAST of mRNA_P-lacustris_contig91.15565.1 vs. uniprot
Match: A0A835YU22_9STRA (TLC domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU22_9STRA)

HSP 1 Score: 198 bits (503), Expect = 2.050e-56
Identity = 124/336 (36.90%), Postives = 179/336 (53.27%), Query Frame = 1 
Query:  163 VATGKLPAPASLLVGMAAGVVLTAMRFALDVAVFKPLARSVLGFPRRLRRTAAVPALDTLCSKSKLLSPEEVVDASTSTGLSPEEVKAYAKERRLSALEDKKIGKFKEAAWRLSVYSFLVVYALRITSGKPWLKDP-ELVWEDWPLGNHVDGLGTYYHVGMAVXXXXXXXXXXDTRRSDFWQMLVHHSATLFLLTFSWLSSLVRVGTLIMLCHDVADIFMETAKLFNYAQ---KRFHWCHLAADGFFFVFASVFGASRLYVFPKYLILSVWRTTALSDVLRH-------------FFVSLLGTLLVLHVFWFHLIVRMVYMFVFHGVEGDIRSDND 1119
            +A G LP P+ L+ G+  GV  TA+R AL+   FKPLA   +G  +  +    VPALD L    +      +  AS + GLS  + +AY   R  +A    ++ KF EA WR ++Y+F+V + L    G+ W KDP +  W  WP     D    YY + M V          DTRRSDFWQ ++HH+ T+ L+T SW+S+ VR+G+L++L HD++D+ +E AK+ NY +   K   W   AADG F +FA  F  SRL +FP Y+I +        D + +              F ++L  L  LH+FW  LI+RMVY  +      DIRSD++
Sbjct:    9 IAKGTLPDPSILVTGLQVGVAFTAVRLALNAVFFKPLAYKAMGLEKP-KAVQPVPALDALYHPKRRPERAALEAASATAGLSAADGEAYLLRRVATATVHARVYKFAEALWRATLYAFMVAFGLYAVVGQSWFKDPWKQCWLGWPHQVQPDKAYQYYALSMGVYTHLIMFQAIDTRRSDFWQHVLHHAVTMALITMSWVSNFVRIGSLVILLHDISDVPLELAKVVNYTKANPKHAKWASPAADGIFGIFALTFLVSRLVLFPYYVIYNTLFVA--EDAVEYTADGPPPRPPCYWIFNAMLLILQALHIFWAFLILRMVYKVIVLQYLEDIRSDSE 341
[Close]
BLAST of mRNA_P-lacustris_contig91.15565.1 vs. uniprot
Match: I2CPH2_NANGC (Lag1 longevity assurance 5-like protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CPH2_NANGC)

HSP 1 Score: 170 bits (430), Expect = 3.380e-46
Identity = 95/240 (39.58%), Postives = 136/240 (56.67%), Query Frame = 1 
Query:  418 VKAYAKERRLSALEDKKIGKFKEAAWRLSVYSFLVVYALRITSGKPWLKDPELVWEDWPLGNHVDGLGTYYHVGMAVXXXXXXXXXXDTRRSDFWQMLVHHSATLFLLTFSWLSSLVRVGTLIMLCHDVADIFMETAKLFNYAQKRFHWCHLAADGFFFVFASVFGASRLYVFPKYLILSVW---RTTALSDVL-RHFFVSLLGTLLVLHVFWFHLIVRMVYMFVFHG-VEGDIRSDNDE 1122
            V AY + RR    E+KK+ KFKEA WR ++Y   V  ++     +PW  D    W  +P       L  YY   + +          DTRRSDFW+M VHH+AT+FL+ FSWLS  +R+GTL+ML HD +D+F+ETAK+FNY  +   W     D  F  FA  F  +RL ++P +++ S      T    + L  + F ++L  L +LH+FWF+LI RM    + +G VE D+RSD++E
Sbjct:    8 VHAYFRHRRQMGREEKKLVKFKEACWRDALYVTAVALSVVCVLPQPWFWDIRECWHAYPFQAVPSPLVFYYTFQLGIYLHLSAYQFIDTRRSDFWEMFVHHAATIFLIVFSWLSCFIRIGTLVMLIHDPSDVFLETAKIFNYISRARPWAQAVTDLLFVCFALTFFVTRLVIYPFWIVHSTLTHAHTIIGGEYLGMYVFYAMLFVLQLLHIFWFYLIARMAVKMIANGMVEKDVRSDDEE 247
[Close]
BLAST of mRNA_P-lacustris_contig91.15565.1 vs. uniprot
Match: A0A0A9XX01_LYGHE (Ceramide synthase 6 n=3 Tax=Mirini TaxID=236659 RepID=A0A0A9XX01_LYGHE)

HSP 1 Score: 163 bits (412), Expect = 6.270e-43
Identity = 106/324 (32.72%), Postives = 177/324 (54.63%), Query Frame = 1 
Query:  205 GMAAGVVLTAMRFALDVAVFKPLARSVLGFPRRLRRTAAVPALDTLCSKSKLLSPEEVVDASTSTGLSPEEVKAYAKERRLSALEDKKIGKFKEAAWRLSVYSFLVVYALRITSGKPWLKDPELVWEDWPLGNHVDGLGTYYHVGMAVXXXXXXXXXXDTRRSDFWQMLVHHSATLFLLTFSWLSSLVRVGTLIMLCHDVADIFMETAKLFNYAQKRFHWCHLAADGFFFVFASVFGASRLYVFPKYLILSVW-RTTALSDVL---RHFFVSLLGTLLVLHVFWFHLIVRMVYMFVFHG-VEGDIRSDNDEGVVDASGNACKQA 1161
            GMA G++L  +R+ L+  V+ P  +S+     + ++   +  L+     +  +  +EV   +  T +S  +V+ + + RR    +   + KF E +WR S YSF  VY L     KPWL + +  W ++P  +  + +  YY + ++           D +R DFWQM VHH+AT+ L+ FSW+ +L RVGTL++L HD ADIF+E AK+  YA+ +        D  F +F  ++  +R+ ++P +++ S   R   + + +    + F  LL  LL LH+FW HLI+++ Y+ + HG +EGDIRS + E + DAS N+   A
Sbjct:   46 GMALGMLL--LRYILEKYVYSPFGQSLGIKGSKPKKAPTIDVLEKAYRLNNKMKDKEVTQIAKQTDMSVRQVERWLRLRRAQE-KPSTLAKFCENSWRCSYYSFSFVYGLWCLWDKPWLWNIDECWTNYPHQSIDNDVWWYYMISLSFYWSLTVSQFSDVKRKDFWQMFVHHNATIALMAFSWVCNLCRVGTLVLLVHDCADIFLEAAKMAKYAKYQ-----KLCDAVFGLFTVLWLVTRIGIYPVWILYSTTIRAPRIVNTMFPAYYIFNGLLLLLLCLHLFWTHLILKIAYIAMLHGQMEGDIRSSSSEDLSDASTNSTNHA 361
[Close]
BLAST of mRNA_P-lacustris_contig91.15565.1 vs. uniprot
Match: A0A0D2UL10_CAPO3 (Longevity protein n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2UL10_CAPO3)

HSP 1 Score: 160 bits (406), Expect = 5.990e-42
Identity = 102/278 (36.69%), Postives = 151/278 (54.32%), Query Frame = 1 
Query:  307 RRTAAVPALDTLCSKSKLLSPEEVVDASTSTGLSPEEVKAYAKERRLSALEDKKIGKFKEAAWRLSVYSFLVVYALRITSGKPWLKDPELVWEDWPLGNHVDG-LGTYYHVGMAVXXXXXXXXXXDTRRSDFWQMLVHHSATLFLLTFSWLSSLVRVGTLIMLCHDVADIFMETAKLFNYAQKRFHWCHLAADGFFFVFASVFGASRLYVFPKYLILSV-WRTTALSDVLRHF----FVSLLGTLLVLHVFWFHLIVRMVYMFVFHG-VEGDIRSDND 1119
            +R    PAL+    K K ++PE   D +  T  +PE +  +   RR +A +  K+ +F+EA WRL  Y+   V+++ I SG PWL D +  W  +P    +D  +   Y + +            D +R DFW+M +HH  T+FL+ FS+ ++ +R+GTL++L HDV+DIF+E AK FNY + +        D  F VFA VF  +RL+V+P+Y++ S  W   AL +    F    F  LL  L  LHV WF  I +MV  F   G V GD RSD++
Sbjct:   79 KRNEPNPALEAEYKKKKRMTPERAADLTKKTDKTPEYIMTWFHRRR-NADKPSKMVRFQEAVWRLIYYTTAFVWSVYILSGYPWLTDTDYCWIGYPEKQTLDPTIQWIYFIQLGFYMSLLFSQFTDVKRKDFWEMFIHHVVTIFLVAFSYHANFIRIGTLVLLVHDVSDIFLEGAKAFNYLKYQ-----KLCDATFVVFAIVFFVARLFVYPRYVLKSAFWDVRALLNTEPFFGLWFFNILLWILQALHVMWFITIFKMVISFASKGEVSGDDRSDSE 350
[Close]
BLAST of mRNA_P-lacustris_contig91.15565.1 vs. uniprot
Match: A0A6P4ZYW6_BRABE (LOW QUALITY PROTEIN: ceramide synthase 6-like n=5 Tax=Branchiostoma TaxID=7737 RepID=A0A6P4ZYW6_BRABE)

HSP 1 Score: 159 bits (402), Expect = 2.040e-41
Identity = 121/349 (34.67%), Postives = 179/349 (51.29%), Query Frame = 1 
Query:  121 YSFMFDDQHLLPGYVATGKL--------PAPASLLVGMAAGVVLTAMRFALDVAVFKPLARSVLGFPRRLRRTAAVPALDTLCSKSKLLSPEE--VVDASTSTGLSPEEVKAYAKERRLSALEDKKIGKFKEAAWRLSVYSFLVVYALRITSGKPWLKDPELVWEDWPLGNHVDGLGTYYHVGMAVXXXXXXXXXXDTRRSDFWQMLVHHSATLFLLTFSWLSSLVRVGTLIMLCHDVADIFMETAKLFNYAQKRFHWCHLAADGFFFVFASVFGASRLYVFPKYLILSVWRTTALSD--VLRHFFV--SLLGTLLVLHVFWFHLIVRMVYMFVFHGV-EGDIRSDNDE 1122
            YS+ ++++  LP  V    L        P    L V +   VVL  +R   +  +  P+ +S LG P   R+ A   A+      S   +P+E  +   +     S  +V+ + + RR +      + KFKE +WR + Y+    YA  I   KPWLKD +  W D+P     D +   Y V +            D +R DFWQM+VHH AT+ L++FSW+++ VR+G+LI++ HD+ADIF+E AKL NYA+     C    D  F VFA VF  SRL+++P +L+ S   T +++D  V   ++V   LL  L  LH+FW   I +M Y FV  G  E D RSD +E
Sbjct:    6 YSWFWNERFWLPPNVTWADLRNTDEVQYPQTTQLYVSVGYAVVLLIIRLIFERFIAGPIGQS-LGIPGE-RKYAEPNAILEKVFTSITKNPDEKRLQGLAKQLDWSERQVQRWFRRRR-NQDRPTLLQKFKEGSWRFTFYTLSFSYAATILKDKPWLKDIKHCWYDFPDHPLTDDITYLYIVELGFYWSLIFSLFRDVKRKDFWQMVVHHVATIMLVSFSWVANFVRIGSLILVTHDMADIFLEAAKLLNYAK-----CQALCDACFVVFAIVFFVSRLFIYPYWLVYSA-ATDSIADKGVFPAYYVFNGLLLLLQCLHIFWGITIAKMAYKFVISGTAEKDDRSDVEE 345
[Close]
BLAST of mRNA_P-lacustris_contig91.15565.1 vs. uniprot
Match: A0A7S3UVL2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UVL2_HETAK)

HSP 1 Score: 159 bits (402), Expect = 2.710e-41
Identity = 107/326 (32.82%), Postives = 167/326 (51.23%), Query Frame = 1 
Query:  172 GKLPAPASLLV-GMAAGVVLTAMRFALDVAVFKPLARSVLGFPRRLRRTAAVPALDTLCSKSKLLSPEEVVDASTSTGLSPEEVKAYAKERRLSALEDKKIGKFKEAAWRLSVYSFLVVYALRITSGKPWLKDPELVWEDWPLGNHVDGLGTYYHVGMAVXXXXXXXXXXDTRRSDFWQMLVHHSATLFLLTFSWLSSLVRVGTLIMLCHDVADIFMETAKLFNYAQKRFHWCHLAADGFFFVFASVFGASRLYVFPKYLILSVWRTTALSDVLRHFFVSLLGTLLV----LHVFWFHLIVRMVYMFVFHGVEGDIRSDNDEGVVD 1134
            G  P+   LLV G+  GV +T +R+ L++ V +PL    + F  +      V ALD L   SK +  E+       TGLS  E+K Y K +R+  L+  ++ K+ E+ WR  +Y+   VY +     K W  D +  W ++P       L  +Y +   +          DT+R DFW+M VHH  TL L+ FS++++  R+G++++  HDV+DIF+E AK+FNY +       +  D  F +FA VF  +RL +FP+  +L       L+ +  H    L G LL+    LH FWF LI R++   +  G+E D RS  +  + D
Sbjct:   54 GNFPSVGELLVFGLYIGVGMTIVRYLLNMFVLQPLGSWAMKF--KSISYIPVKALDDLFETSKFIPKEKEFSLGQITGLSVPEMKNYIKTKRIERLQKLRLWKYTESWWRFLLYTTTSVYGVCYLWNKNWTWDIKEYWINYPFQQVDPALKLWYFMEFGLYLNFFVFQFIDTKRKDFWEMFVHHLVTLGLIGFSYMTNFTRIGSVVLCLHDVSDIFLEAAKIFNYMKLARPVFGIFCDVTFVIFALVFFTTRLILFPRQ-VLYANLVDVLNYIQMHITYYLWGALLLCLQALHAFWFFLICRLIKKSIVDGIEKDERSITESDISD 376
[Close]
BLAST of mRNA_P-lacustris_contig91.15565.1 vs. uniprot
Match: A0A6P7JJR8_9TELE (ceramide synthase 2-like n=15 Tax=Percomorphaceae TaxID=1489872 RepID=A0A6P7JJR8_9TELE)

HSP 1 Score: 156 bits (394), Expect = 3.570e-40
Identity = 112/309 (36.25%), Postives = 167/309 (54.05%), Query Frame = 1 
Query:  268 PLARSVLGFPRRLR-RTAAVPALDT-LCSKSKLLSPEEVVDASTSTGLSPEEVKAYAKERRLSALEDKKIGKFKEAAWRLSVYSFLVVYALRITSGKPWLKDPELVWEDWPLGNHVDGLGTYYHVGMAVXXXXXXXXXXDTRRSDFWQMLVHHSATLFLLTFSWLSSLVRVGTLIMLCHDVADIFMETAKLFNYAQKRFHWCHLAADGFFFVFASVFGASRLYVFPKYLILSVW--RTTALSDVLR-HFFVSLLGTLLVLHVFWFHLIVRMVYMFV-FHGVEGDIRSDNDEGVV-DASGNACKQAVQNG 1173
            PLA S+LG   + R R    P L++  CS SK  +   +   S  TG S  +V+ + + RR +     K+ KF+EA+WR + Y F     L +   KPW  D +L+WED+P    +     YY + +            D +R DF + +VHH AT+ L++FSWL + +R GTLIM+ HD AD  ME+AK+FNYA  R   C++     F +FA+VF  +RL + P ++I + W    T     L  +FF  L+  L +LH+FW  LI+RMV  F+  + +  D RSD +E    D  GN  ++ ++NG
Sbjct:   63 PLA-SLLGVSDKQRLRAPTNPVLESYFCSSSKHPTQSSIESLSRQTGCSVRQVQRWFRRRR-NQDRPSKLKKFREASWRFTFYLFAFFAGLAVLVDKPWFYDMKLMWEDFPKMPLIPSQYWYYMIELGFYLSLLLSVASDVKRKDFREQIVHHVATILLISFSWLVNYIRAGTLIMIVHDAADYLMESAKMFNYAGWR-RTCNVI----FTLFAAVFIITRLVILPFWIIHTTWVYPLTLYPPFLGFYFFNGLMFVLQILHIFWAVLILRMVIKFLPGNDIVEDERSDKEETESEDEEGNEWREKMKNG 364
[Close]
BLAST of mRNA_P-lacustris_contig91.15565.1 vs. uniprot
Match: UPI00148BA827 (ceramide synthase 2 n=3 Tax=Pleuronectoidei TaxID=30942 RepID=UPI00148BA827)

HSP 1 Score: 155 bits (393), Expect = 4.190e-40
Identity = 114/327 (34.86%), Postives = 172/327 (52.60%), Query Frame = 1 
Query:  172 GKLPAPAS-LLVGMAAGVVLTAMRFALDVAVFKPLARSVLGFPRRLRRTAAV-PALDT-LCSKSKLLSPEEVVDASTSTGLSPEEVKAYAKERRLSALEDKKIGKFKEAAWRLSVYSFLVVYALRITSGKPWLKDPELVWEDWPLGNHVDGLGTYYHVGMAVXXXXXXXXXXDTRRSDFWQMLVHHSATLFLLTFSWLSSLVRVGTLIMLCHDVADIFMETAKLFNYAQKRFHWCHLAADGFFFVFASVFGASRLYVFPKYLILSVWRTTALSDVLR-------HFFVSLLGTLLVLHVFWFHLIVRMVYMFVFHGVEGDIRSDNDE 1122
            G++ A AS L   +   + L  +R+  +  +  PLA  V G   R+R+TA   P L+   C ++++ S  +V      T  S   ++ + + RR       +  +F EA+WR S Y F  V  +     KPWL + + VW  +P  + +     YY + M            D +R DF + ++HH ATL LL+FSW+S+ +R+GTL+M  HD ADI +E AK+FNYA+    W H  ++  F VF  +F A+RL +FP +LI   W    +  V R       +FF  +L  L +LH++W  LI RMVY F+F  +EGD RSD +E
Sbjct:   30 GRVYAKASQLYAALPCALCLLLVRYVFERYLATPLA-DVWGIRDRIRQTAEPNPTLENYFCHQARVPSQADVRSLCKKTSWSERSIQVWFRRRRNQERPGLR-KRFCEASWRCSFYFFAFVSGVLALYDKPWLYNLKEVWAGFPKQSMLSSQYWYYLLEMGFYLSLLLSLTFDVKRKDFREQVIHHIATLTLLSFSWISNYIRIGTLVMAVHDSADILLEGAKVFNYAK----W-HQTSNAMFVVFTVLFMATRLVIFPFWLIHCTW----VYPVERFPPFFGYYFFNVMLVVLQMLHLYWAFLISRMVYKFIFSKLEGDDRSDEEE 345
[Close]
BLAST of mRNA_P-lacustris_contig91.15565.1 vs. uniprot
Match: UPI001BEB122A (ceramide synthase 2 n=1 Tax=Chelmon rostratus TaxID=109905 RepID=UPI001BEB122A)

HSP 1 Score: 154 bits (388), Expect = 2.220e-39
Identity = 106/303 (34.98%), Postives = 163/303 (53.80%), Query Frame = 1 
Query:  235 MRFALDVAVFKPLARSVLGFPRRLRRTAAV-PALDT-LCSKSKLLSPEEVVDASTSTGLSPEEVKAYAKERRLSALEDKKIGK-FKEAAWRLSVYSFLVVYALRITSGKPWLKDPELVWEDWPLGNHVDGLGTYYHVGMAVXXXXXXXXXXDTRRSDFWQMLVHHSATLFLLTFSWLSSLVRVGTLIMLCHDVADIFMETAKLFNYAQKRFHWCHLAADGFFFVFASVFGASRLYVFPKYLILSVWRTTALSDVLR----HFFVSLLGTLLVLHVFWFHLIVRMVYMFVFHGVEGDIRSDNDE 1122
            +R+  +  V  PLA  V G   R R TA   P L+   CS++++ S  +V      T      V+ + + RR   +E   + K F+EA+WR   YSF  V  +     KPW  + + VW  +P  + +     YY + M            D +R DF + ++HH+ATL LL+FSW+S+ +R+GT++M+ HD +D+ +E  KLFNYA+ +       +DG F VF +VF  +RL +FP ++I   W    L D       +FF  +L  L +LH++W  LI+RMVY F+F  ++GD RSD +E
Sbjct:   52 VRYLFERYVATPLA-DVCGIKDRGRLTAEPNPVLENYFCSQARVPSQADVRSLCKKTSWQERRVQVWFRRRR--NMERPGLRKRFREASWRCVFYSFAFVCGVLALYDKPWFYNLKEVWAGFPKQSMLPSQYWYYILEMGFYLSLVLRLTFDVKRKDFKEQVIHHTATLILLSFSWISNYIRIGTIVMVLHDSSDVVLECGKLFNYAKWQ-----KTSDGMFVVFTAVFMVTRLVIFPFWVIHCTW-VYPLEDFAPFFGYYFFNVMLLILQMLHLYWAVLILRMVYKFIFSKLDGDDRSDEEE 345
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig91.15565.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G213_ECTSI9.930e-18375.35TLC domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A835YU22_9STRA2.050e-5636.90TLC domain-containing protein n=1 Tax=Tribonema mi... [more]
I2CPH2_NANGC3.380e-4639.58Lag1 longevity assurance 5-like protein (Fragment)... [more]
A0A0A9XX01_LYGHE6.270e-4332.72Ceramide synthase 6 n=3 Tax=Mirini TaxID=236659 Re... [more]
A0A0D2UL10_CAPO35.990e-4236.69Longevity protein n=1 Tax=Capsaspora owczarzaki (s... [more]
A0A6P4ZYW6_BRABE2.040e-4134.67LOW QUALITY PROTEIN: ceramide synthase 6-like n=5 ... [more]
A0A7S3UVL2_HETAK2.710e-4132.82Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A6P7JJR8_9TELE3.570e-4036.25ceramide synthase 2-like n=15 Tax=Percomorphaceae ... [more]
UPI00148BA8274.190e-4034.86ceramide synthase 2 n=3 Tax=Pleuronectoidei TaxID=... [more]
UPI001BEB122A2.220e-3934.98ceramide synthase 2 n=1 Tax=Chelmon rostratus TaxI... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig91contigP-lacustris_contig91:227998..238129 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score525.8
Seed ortholog evalue1.7e-146
Seed eggNOG ortholog2880.D7G213
Preferred nameCERS5
KEGG rclassRC00004,RC00064
KEGG koko:K04709,ko:K04710,ko:K05613,ko:K17087
KEGG TC2.A.23.2.2
KEGG ReactionR01496,R06517,R06527
KEGG Pathwayko00600,ko01100,ko04071,ko04724,ko05014,map00600,map01100,map04071,map04724,map05014
KEGG ModuleM00094,M00099
Hectar predicted targeting categoryother localisation
GOsGO:0000981,GO:0001302,GO:0001701,GO:0001932,GO:0001934,GO:0003674,GO:0003700,GO:0003824,GO:0005102,GO:0005125,GO:0005126,GO:0005160,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005615,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005637,GO:0005737,GO:0005783,GO:0005789,GO:0006355,GO:0006357,GO:0006629,GO:0006638,GO:0006639,GO:0006641,GO:0006643,GO:0006665,GO:0006672,GO:0006807,GO:0006873,GO:0006885,GO:0006950,GO:0006984,GO:0006991,GO:0007009,GO:0007035,GO:0007154,GO:0007165,GO:0007166,GO:0007167,GO:0007178,GO:0007275,GO:0007399,GO:0007417,GO:0007420,GO:0007492,GO:0007498,GO:0007568,GO:0007569,GO:0008150,GO:0008152,GO:0008285,GO:0008544,GO:0008610,GO:0009058,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009636,GO:0009719,GO:0009790,GO:0009792,GO:0009888,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009894,GO:0009895,GO:0009913,GO:0009966,GO:0009967,GO:0009987,GO:0010033,GO:0010046,GO:0010256,GO:0010468,GO:0010469,GO:0010556,GO:0010557,GO:0010558,GO:0010562,GO:0010604,GO:0010605,GO:0010624,GO:0010626,GO:0010628,GO:0010646,GO:0010647,GO:0010721,GO:0010862,GO:0010941,GO:0010975,GO:0010977,GO:0012505,GO:0014013,GO:0014014,GO:0016020,GO:0016021,GO:0016043,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0019216,GO:0019219,GO:0019220,GO:0019222,GO:0019725,GO:0019866,GO:0022008,GO:0023051,GO:0023052,GO:0023056,GO:0030003,GO:0030004,GO:0030148,GO:0030154,GO:0030176,GO:0030216,GO:0030334,GO:0030336,GO:0030424,GO:0030509,GO:0030545,GO:0030641,GO:0030855,GO:0031090,GO:0031224,GO:0031227,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031344,GO:0031345,GO:0031399,GO:0031401,GO:0031965,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0031984,GO:0032101,GO:0032102,GO:0032268,GO:0032270,GO:0032501,GO:0032502,GO:0032879,GO:0032933,GO:0032991,GO:0033554,GO:0034399,GO:0034641,GO:0034644,GO:0035690,GO:0036146,GO:0040012,GO:0040013,GO:0042127,GO:0042175,GO:0042221,GO:0042325,GO:0042327,GO:0042493,GO:0042592,GO:0042981,GO:0042995,GO:0043005,GO:0043009,GO:0043067,GO:0043086,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043408,GO:0043588,GO:0043603,GO:0043604,GO:0044092,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044271,GO:0044421,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0045595,GO:0045596,GO:0045664,GO:0045665,GO:0045833,GO:0045834,GO:0045851,GO:0045893,GO:0045934,GO:0045935,GO:0045937,GO:0045944,GO:0046467,GO:0046486,GO:0046513,GO:0046889,GO:0046890,GO:0048018,GO:0048468,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048585,GO:0048679,GO:0048681,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0048878,GO:0050291,GO:0050767,GO:0050768,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050801,GO:0050896,GO:0050994,GO:0050995,GO:0051052,GO:0051053,GO:0051093,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051239,GO:0051241,GO:0051246,GO:0051247,GO:0051252,GO:0051254,GO:0051270,GO:0051271,GO:0051338,GO:0051348,GO:0051452,GO:0051453,GO:0051716,GO:0051960,GO:0051961,GO:0051972,GO:0051974,GO:0055067,GO:0055080,GO:0055082,GO:0060251,GO:0060253,GO:0060255,GO:0060284,GO:0060322,GO:0060393,GO:0060395,GO:0060429,GO:0061024,GO:0061576,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070141,GO:0070570,GO:0070571,GO:0070848,GO:0070887,GO:0071214,GO:0071310,GO:0071363,GO:0071478,GO:0071482,GO:0071492,GO:0071495,GO:0071501,GO:0071704,GO:0071772,GO:0071773,GO:0071840,GO:0072720,GO:0072721,GO:0080090,GO:0080134,GO:0080135,GO:0090092,GO:0090100,GO:0097237,GO:0097458,GO:0098771,GO:0098772,GO:0098827,GO:0104004,GO:0120025,GO:0120035,GO:0140110,GO:1900147,GO:1900148,GO:1901564,GO:1901566,GO:1901576,GO:1901700,GO:1901701,GO:1902531,GO:1902680,GO:1903034,GO:1903035,GO:1903506,GO:1903508,GO:1903975,GO:1903976,GO:1905044,GO:1905045,GO:2000026,GO:2000112,GO:2000113,GO:2000145,GO:2000146,GO:2000278,GO:2000279,GO:2001141
EggNOG free text desc.sphingosine N-acyltransferase activity
EggNOG OGsCOG5058@1,KOG1607@2759
Ec32 ortholog descriptionTRAM/LAG1/CLN8 homology domain
Ec32 orthologEc-07_003350.1
EC2.3.1.24
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko02000,ko04147
Exons9
Model size1197
Cds size1140
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig91.15565.1prot_P-lacustris_contig91.15565.1Pleurocladia lacustris SAG_25_93polypeptideP-lacustris_contig91 228055..238129 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817337.6700647-UTR-P-lacustris_contig91:227997..2280541622817337.6700647-UTR-P-lacustris_contig91:227997..228054Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig91 227998..228054 +
1693494986.7388203-UTR-P-lacustris_contig91:227997..2280541693494986.7388203-UTR-P-lacustris_contig91:227997..228054Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig91 227998..228054 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817337.6810884-CDS-P-lacustris_contig91:228054..2282641622817337.6810884-CDS-P-lacustris_contig91:228054..228264Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig91 228055..228264 +
1693494986.7588863-CDS-P-lacustris_contig91:228054..2282641693494986.7588863-CDS-P-lacustris_contig91:228054..228264Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig91 228055..228264 +
1622817337.69139-CDS-P-lacustris_contig91:231796..2318951622817337.69139-CDS-P-lacustris_contig91:231796..231895Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig91 231797..231895 +
1693494986.7671683-CDS-P-lacustris_contig91:231796..2318951693494986.7671683-CDS-P-lacustris_contig91:231796..231895Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig91 231797..231895 +
1622817337.7015119-CDS-P-lacustris_contig91:232613..2327331622817337.7015119-CDS-P-lacustris_contig91:232613..232733Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig91 232614..232733 +
1693494986.7788248-CDS-P-lacustris_contig91:232613..2327331693494986.7788248-CDS-P-lacustris_contig91:232613..232733Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig91 232614..232733 +
1622817337.7157187-CDS-P-lacustris_contig91:233453..2335481622817337.7157187-CDS-P-lacustris_contig91:233453..233548Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig91 233454..233548 +
1693494986.7884183-CDS-P-lacustris_contig91:233453..2335481693494986.7884183-CDS-P-lacustris_contig91:233453..233548Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig91 233454..233548 +
1622817337.729467-CDS-P-lacustris_contig91:234162..2342531622817337.729467-CDS-P-lacustris_contig91:234162..234253Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig91 234163..234253 +
1693494986.802333-CDS-P-lacustris_contig91:234162..2342531693494986.802333-CDS-P-lacustris_contig91:234162..234253Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig91 234163..234253 +
1622817337.7428591-CDS-P-lacustris_contig91:234587..2346761622817337.7428591-CDS-P-lacustris_contig91:234587..234676Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig91 234588..234676 +
1693494986.8107939-CDS-P-lacustris_contig91:234587..2346761693494986.8107939-CDS-P-lacustris_contig91:234587..234676Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig91 234588..234676 +
1622817337.754007-CDS-P-lacustris_contig91:236302..2364111622817337.754007-CDS-P-lacustris_contig91:236302..236411Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig91 236303..236411 +
1693494986.8200867-CDS-P-lacustris_contig91:236302..2364111693494986.8200867-CDS-P-lacustris_contig91:236302..236411Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig91 236303..236411 +
1622817337.7662437-CDS-P-lacustris_contig91:236846..2370191622817337.7662437-CDS-P-lacustris_contig91:236846..237019Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig91 236847..237019 +
1693494986.829864-CDS-P-lacustris_contig91:236846..2370191693494986.829864-CDS-P-lacustris_contig91:236846..237019Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig91 236847..237019 +
1622817337.779303-CDS-P-lacustris_contig91:237975..2381291622817337.779303-CDS-P-lacustris_contig91:237975..238129Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig91 237976..238129 +
1693494986.8392189-CDS-P-lacustris_contig91:237975..2381291693494986.8392189-CDS-P-lacustris_contig91:237975..238129Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig91 237976..238129 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-lacustris_contig91.15565.1

>prot_P-lacustris_contig91.15565.1 ID=prot_P-lacustris_contig91.15565.1|Name=mRNA_P-lacustris_contig91.15565.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=380bp
MMAGSAVNAAGFVELPAGMRFYSFMFDDQHLLPGYVATGKLPAPASLLVG
MAAGVVLTAMRFALDVAVFKPLARSVLGFPRRLRRTAAVPALDTLCSKSK
LLSPEEVVDASTSTGLSPEEVKAYAKERRLSALEDKKIGKFKEAAWRLSV
YSFLVVYALRITSGKPWLKDPELVWEDWPLGNHVDGLGTYYHVGMAVYWH
MIIFQFWDTRRSDFWQMLVHHSATLFLLTFSWLSSLVRVGTLIMLCHDVA
DIFMETAKLFNYAQKRFHWCHLAADGFFFVFASVFGASRLYVFPKYLILS
VWRTTALSDVLRHFFVSLLGTLLVLHVFWFHLIVRMVYMFVFHGVEGDIR
SDNDEGVVDASGNACKQAVQNGKKKSKTT*
back to top

mRNA from alignment at P-lacustris_contig91:227998..238129+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-lacustris_contig91.15565.1 ID=mRNA_P-lacustris_contig91.15565.1|Name=mRNA_P-lacustris_contig91.15565.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=10132bp|location=Sequence derived from alignment at P-lacustris_contig91:227998..238129+ (Pleurocladia lacustris SAG_25_93)
TCTCAGGTCTGTGTGGTTGATTGAACAAACATCCACAGCACGCGGCAGCA
CGTGGTGATGATGGCGGGCTCAGCAGTAAACGCGGCAGGATTCGTCGAGC
TACCTGCCGGCATGAGGTTCTACTCATTTATGTTCGACGACCAGCATTTG
CTGCCTGGATATGTTGCAACAGGGAAGCTTCCCGCTCCTGCGTCCCTCCT
GGTGGGCATGGCCGCAGGCGTGGTGCTGACTGCCATGAGGTTCGCTCTCG
ACGTGGCCGTGTTCAAGGTGAGAAGGTCTCACTGCTGCACATTAGACCCC
GAATGAATGGTGAGCGATCTGTGTAGGCTATGTTCCGATTTCCGATTTCC
GATTGGTGCGGCAGGATTTAAAGAATATACATAACATCACCAAAAGACCA
CCACCTAGGAAAGGTCTCGTAGATGGCTTCATTTTCATCTAGTCTTTATA
GTGAAGGTTGGAATGACACCCGCCGCCTATTGACTTCTGTGTATGTGTTG
AAGTGTCTACACTATGCGGCCGGAATAAAAACACCTGCTGTAGAGGTATA
AATTTGTAAAAACTCCCCTGCAAATCTCTGCGAGGTCAGCGACGATGTTT
GGGGAGAAACCCGCCGTTACGTCGTGTTTTACTATGCCTCCACAGGAATA
CATCGTAGTGTCTGCATGAGAGACATCTATCTTATCGTTTTTCATATACT
ATTCAAAAATATCGGTCGGTTCGCAAAGCACACCCCGGACTCTGCAGGTG
TTCTTGTTCCGGCCGCACAGCGTTGAGACTTCAACATACACAAATAAGTC
AGTAGGCGGCAGGCGTCATCAGACCTTTACTGTAAAGACTGTGGATTTCA
ACAGCCATCTGTGGGGGACTTCCCAAATGGTAGCCTTTCTTTGAAGTTGT
GTAAGATGTAATATTTTTCTTACTTTGGAAATGATGTCTGAAAGACAGAG
TGCAGTAGCATGGCTTCATTTATTATATAGTTCCGAGTAGTGACCAACTT
GTGTCTCTACCCCTTCACAGAAGCTACAATGATAACTCCTGTGGGTAACA
GGCTCAGCAAGATAGTTTGATATTCATCTTGTGTATCGGATTGTAGTCAT
GGGAGGAGTATAGGAGAGAATTGGGGCGGAGCGATTTTTAACTCCTCGCT
TTCAACATATCTTAGCAGTGCAAATGTACGTTTTGGTAGGTTAGACTATA
CATGTTGGGTGTGTGTAAAGAGGCTTGAACGAATTACAAGTAGTCTGCAG
AGGCTTGTTGGTTCTTCAATTGATATCAGAACCATCGATACGTTTTGGTT
TTGGTCAAGACATATTGGAGATAACGATCAATGGGTATTTGATTGGACTA
CAAGTATTTCAACAGGGATTGGAATCGCCGACAGAATCATATCGACTCCG
GAGTTAGCTAGTTTGTTTCAAGAGGTACTAATTTAAAAATAAAATCAAAC
TAGCAATATTCGCAGATCGATAGGTATTGGATTGTCAATATGGCTAGGGC
CAGCATATCGATAGGCATTGGGAGACCAAGGTTTGGAAAATTTACATTGT
CGAAAAAAAACACAAAAACAGTGCCAGACGAAACGTATCGGTTAAAAACT
ACCTACTTCATAAACTGGTGAACACAAACGCGCCCGCCATAAGGTGCTGC
AAAGCAAAACGTTTCGTGCCAAACGACAGCCGTCGAGGGGATACCGACAT
TGGGCAATAAGGGAGTAAGTGAAACGATCATGAGACAACATACTGTAGGT
TGATCGATTACGACGTGAACTGTTCGTCAGTCACCCCAAGTTTCGCCAGC
ATATTGGCCACCCCAATAGTCATTGATCGATTCCGATATGAAAGTGTCGG
TTGCCTCAGTGATAGGTGTTGATGATGATGTCGTCATATATTGGTTTCTG
CAATAGATATTGATCATCAACCTAGTGAGATATTGACTACTCCGATAGGT
ATTGATCATTTTCCGTAAAAACATATTGTCTACTTGTATTTCAATAGGTA
TTGATTTACAAATTTTCGACCTGTTGCCTTCTCCATCGGGTGTCGATCCT
CGGAAACACGAAACATATTGTCGAAAAAAAGCTTGTCGAGGGACAACTAA
AAGGTATGCTGGTTGCAACAAGACATATCGTAAGATGTGTCGCATGCATT
CGGTGCTCCCAATATCCATGTAGTTTCGGTTGTCTTGAACTTATTGCTGC
CTTCAAAGCTATCGGTACGCCACACAACAAACCTATTGGGAGCCTCAATG
GTGTTAAGGCTTGATTTATCCCGCATGTTGCCGGACCAATATTCTATTGG
ATAGGCTACTCCGGGGTATAAGCAAAAAGGCATGAATAACCCGAATCTAT
CGATCTAACAATCCAGTGCATACTGGCAATTGCAATAGATATGTCGGAGC
GATAGGTCCGTGGAACTTCTATCGATAGGTATTGTTTAGTTCAATTTTTT
AGTCGACTCTCTCGTCAAAATGTGTAAATATGTAGGGCGGGATCTATTGA
CATTTGTTTCTACCACCAATATCCTCACACGTGGCAGTAGGAGTACCTAT
CGCTGCTGCAGCGCCTTCTGCACGAAGACATCGATACACATCTATTGCAG
CAACAGGCTTTCAAAACATTTCTCGCTAGACGTTGATCGAACAATACCTC
ACTGAACAAGGTTACCATCACCTGTCGCCGTCGACAGCAGCTCCGCAAAA
TACTAATCAAACAGTACCCTTTGGGGGTACAAATATGCCACCTATTGCAA
TAGATTCCTATCGATATCCAACCTATTGTCCGGTGTGGTTCGCAGACGCT
TCGGCGGGTTAGATACTAGTCGCCGAGAACTGACTTACTGGTACTCCAAC
TCCACGATACGCGTGTACGGGGCGGTAAGCATTCTGTAAGGAGAACGAGG
AGAGAGAGCGCTCTCCCTACCCCCCGCACCTCCCTGACACACGACAGGCG
CTCATATTTGCCAAAAAGATGTTCGCTTTGGTTGGGACGTCCTTATTCCG
CACCCGCGGATTTTTCACAATCCACACGTCAAACAACACACTCCACACAA
ACATGCACAATTGAGACGTGCCTGGGGCGACGTTGGCATTCACATGCATT
GGTCGAAGTGACTCGCGCAACAAGCATGCCTCGCTTTGTCCGTTTGATTA
ATTTAAGACTACCCGGCCTGTCGTGAAATAGAAGACACAACACCCGAGGA
GTGTTTAGGCAGGTGGTTGAATGATATTGGGAAAACCCTCCGCGCTCGCT
AACACCCCGCACGCATCAGGATGTGTTGTACAGAACAACAAACCCAGCAG
TATCTAAACTAGAGAGAGTTTTTGCCGCGAAAAGACTGCTCGCGGAGGTC
CTCCTTCCTCCACCCTTCTCCGTGCCTGTGCGGTTCCTGCGGGGCCACAG
CACACTGGCAACATGGACTTTTCCTTCTTTCCTACCCCGCTGGCCGTTGC
CGTCGCCAGCCGCTTTCTAGACTATCCTGTGGCCTTGCCTCTGTAACTGA
AGGGCTCCGATCCGGTATCGCACAAAACAATATCTCGTTGGTGGATGCCG
AAATCTTGAGCTCGAGAAGGGTTCAAGCATTCCTTCCTGCAAAGGGCGAA
TCCACCGAATAGGATTATTCTCTCGACTGCATCACCGCACAGCTGCTAGC
TATGTCGGCAAAAGCCACCGGATCATACCCCAACTCTCTTTTCCGTGGAC
GATGACATGACCCCCATTGTGTCGTCCCTCTGCTTTGCTGTTGGCGATTT
CGTGGTAATTTTTTTTCATGTGTTTTGCCCCTGGCCCTGCAACATACAGC
CGCTGGCGAGGAGCGTCCTCGGCTTCCCTCGTAGGTTACGTCGCACCGCC
GCGGTGCCCGCCCTCGACACTCTCTGCTCCAAGTCCAAGTTGCTATCGGT
GGGTGTCATCGCGCTTTTACGTACATCTTGGCCAGTTCTAGAAAATTGTA
AGTGCAGGCTATGGCTGTCGTTGTCTCGAGCGTGCGTCGCTCACGCGCTT
GGCGTGGCCGCATCTGACCTCTCTGACCTCTGGCAGGCAACTTTTTTGGT
GTCAACATTTAATTTGCGTCGTTTTTATGGCCTGTGAAGCGTCGTGGTCG
GTTGTGCACTGTTGCCCTTTTCCCGGTCCTGTTGTGCCGCTGCTGACACC
GCTGCTATGCCGTGACCCGTTTGGTATGCTTAATTAAGCACACTGCATGC
ACATCAGACATCGTGCTTTGTGTTTTTCATTTTGCGGTGGTTCGGATCTC
TTACGATAAGGACTATGTTGAATCGAAGGCGTACGGCACGGCGAGGCCCC
TCTTCCGTCTTCTCACTCCCGTCTCGTTTGGCGGCTTGTGTGACGATGAC
GAGGAGATGGCGACCATCGTGTTTTATTTGGTCTTCATCCACAATCGATC
AATCGATCGCCTCCTCGGTATTCTCGGTATTATTTATTCTTTGTCCCCTT
GTCCTATAGTACCGTCTTCACCTTCACCTTCAGACGCAGGCACATCCACA
TCCACGTCTCTATAATACCTTCACCTTAATCCTAATCCTAATCCTAATCC
TAATATTGATCCTAATCCTAATCCTAATCCTAATCCTTGTCTTCACCTTT
GCCTCGTGCCGCGCAGCCTGAAGAGGTCGTTGACGCGTCAACATCGACCG
GCCTCTCCCCGGAAGAGGTGAAAGCCTACGCCAAGGAGCGAAGGCTGTCC
GCCCTTGAGGACAAGAAGATCGGGAAGTTCAAGGAGGTATGGAACAAATG
CATTGCACGCGTGGCTAGTAAAATGCGTCGATGATGCCGGTGACGGCTTC
GGTGTGGGTGAGACAGCAAGCTTTTTCTGGAGGAGGGCGTCGCTGGCCGC
TTCCTCTGCTTACTCGCTGACATGCTCACGATGTCTCTACCAAATAGAGT
TCGCGTTGATTTGGGAGGTGTTTGGTGCTGCTCCTGCTGCTGCTGCTGCA
TAGCCTCGAGACTGTCGGCGCTGCCTGTTGCAGTCTATGCCATGTTGATA
TGCCGAGCATCAATGCCGGGTGAAGCCTCGGAATCCCTCCGCCTCCCCCT
CCCCCCAATGTTGTCTGATGGCAAATAGGGCAAAAACGTTGATTTGGAAG
CCAAGTTTTGCTGGTGGTATGCGTCTCTCCTGTGGAAGCCAGCAACGGGT
GATAGTATCCATTCTCCCAAGCACGCGTTTTGTCATTTACTCCGTACATC
CCTGTGTATATGCGGTGTAGTGGCTCGTGCTCTCGACGATAAGACGCGCA
ACAAACCCGCGAGCGCGTTTTTGTACCCTTTTTGTGTCCTCTTTGTACCC
TCTTTTTTACCTAGTTTTACCCTTTTCTGTACCCTCGTCATACCTTTTGT
AAACCTTATTTTTGTGCCCTCTTTGTACCCTGTTGAGCGCTTTCGTACAT
TTTTATGCTTTTGTACCTTTTTTGTACCCTCTATGTGCCACTATCTCTGT
CTCTAGGCGGCGTGGCGCCTGTCGGTGTATTCGTTCCTTGTGGTCTACGC
GCTCCGGATTACTTCCGGGAAGCCGTGGTTGAAAGATCCCGAGCTGGTGT
GGTGAGATAGAGCGAGAGTCGCACTCTCCGTCCCTACCGTGTACCGTGTA
CCGTGTACCGCGTGCGGTGGTATTGTGTGCGACCATCCTTTGGGCCGAAT
CTGCGATTGTCGGTACATTGGCAGCGGGAGCGGGTTAGTTTTTTGGAAAA
GTAGGACTGACCATTCGTCTCGCCGGAAGTATCGACCCCGTGTGAATCTT
TCGGGGACACACGTTTTGTCGTTGCCGTTAGGGAGTGGTAAGTCGGCGCC
GAGACAAGCGGCCCGAGGGTTCCTTCCTCCTCGTCATGACTCGGTCATTT
TTGCGAAGCGATCGCCGTCCTGCCCTTGAGCTGCACTCTTCTTCACCATC
ACCAGGGATGCTTGCTCGAGGGTGATAGCGTTGGATCTACTGTTGGATGT
GTCATGTCATCACCCGGGACACGGTGCCGTTTCAATGGGAACAGAAGCTA
GGAGAGAAGAGCGGGATATGGTTTGGTAATGCAGTGATGGTAAAAGCATG
GCAGGGACCCCATAAAAATGGAAAATGGCGTGCCTGCGCGGAAACCAATA
ACAGAGACGACCCCCGATGTGTACTCCGTCTTTTTGTGTGCTTCGCTGGT
GATGTGTCGACACAGGGAAGACTGGCCACTGGGAAACCACGTGGATGGGT
TGGGCACGTACTACCACGTGGGAATGGCGGTATACTGGCACATGATCATC
TTTCAGGTGCCGCAGTCGTGTGGGATTCAGGGGTTAGTGGTGGTTTTGTA
GTGGTTTTGGCCTGCGGTCCAAAGCATCCCCCCCCTTTTCTAGCTGGATA
TTCGTTTGCGGTCTTGTCGAGCGCTTCTCTGAGCGAATTAGCGTCCGATC
CTGTCAATAGAATAGAATTCGAACAGAGGTACGATAAGCCGCTAGGCGCG
AGGGAATGGTGACAATGATGATGATAAGAGTGCACCGCAAAGCTTCCAAG
GAATATATGAAGACCGATATGCAACGGCTGCATCGGCGCTAGTGTTTTTC
TCCGTTCTCAACACCTGGCTACTGCCATTCGTTTCTACAGTTCTGGGACA
CGAGACGGTCGGACTTCTGGCAGATGCTGGTCCACCACTCGGCCACCCTC
TTCCTCCTCACGTTCTCCTGGCTGTCCAGGTGCCGTGCCATCAGTCCAGA
TTTTGTCCAGGCGTTGCTTAGAATGATTTTTGTGGTGGTATGATTTGACT
GACTGCCACACATAACATCGGAATCCCACCGCTCTTTGAGGTCTGCGAGG
TATGTCAGTCGAGTGTGCCGTAGGTTGCATAGGGCATCGCACTTTCACAA
GATACTATAACCCCTTCAAAAGAATCAAACAATACCATACCCCCATGTGT
TTCTTTCTTCCATCCCGACAAACACGGAGGACTCTCAAATCAAGTGGAAC
GGTGACATGAGATACCACACCCCTATACGATACCACACCACACATCCGTG
TGATGATTCCACACACCCGTGAGATCATTTTTCCGGACCCACAGTGACGT
GACACCGGTGTGGTATATCGTGCAACCTACGGTACCTGCTGCCTGCGGAC
TTGCCGTCGTTGCCGTTATAGTTTTCTTGTGATGACCTCCAGTACGTCCA
AATCTTCGGTACCCTTGGCAACGAATTTTCTTTGTCACAATCGCATCCTA
AGTAAGGTGCGACACACGAGATACAGTCCGAATAGGGCAGAGAATGTAAC
GCCGCCGCTCGCGATATCGTGGAGCTGGGCCCAGGAAGTGAGAGATGCAA
GGCCGTAGGACAGAGAGAATACGCACTGTGAGCGACGGTCAAGGAATGGG
ATGGAGGAAGCAGGGTTAAGTACAGTACGGTGCCCGCCAAGGTCCCCGAA
AGGAAGGTACAACTACAGTACAAGTAGTAGAGCCCATCTCATCAAAAGGT
AGAAAAACAAAAAAACACACGCGGGAAAAGTAGCGATGGTCGTGGGTGCT
GATCCAAGCCGCAGACGGTGTGTGCACATGGTCCGAGCAGCCCATTTAGC
TCTAACGCGGAATATCGACGTGCAAATATTCTCTCGGATGCAAATTACTC
ATGAACTGAGGTAGAGAGATGTGTGGGCTGTAAGGGACTCAGCGAGAAGG
GCGTGCATGGTTGTGTGCTCGATCTCTCATCTCTCATATACTGTAGATAC
CTGGATATGCTGTCGCACAAACAAGACTGAGAGGCGGTACAAAATCATAC
TTTTAGGGTCACGCATGCCACTCGTAAGCCTCCATCGGCCACCCGAACTA
TAGTGCCCAGCATTTCTGACGCCGATTTGGGGGGTTGAAAAACAAAAGAA
AGGGATCTCTAGCGAATGGATTTGAATCCGTTGGAAAGATATCGTCAGAG
GCGTTCAAATGAGCCATCGGAAGTTGTGCGTTCGCGCCGTGAAGAAAGTT
GTGGCTCTACTGCAATACCATCGCTGCAGAGGACACTTTATCCCACAAAA
ATGACGAACCCACCGGAAGAAAATTACCGATTATGAAAGTTCTATTTCAG
AGCAATTACAAGCGGAATCATCCCCGAGCGGTTTGGAAAAGAACCCGAAA
AACAAACAAACCCAGGGAGAACCCCCCTCTCCCCGACTACTTCCCCCCAT
GTTTCCCCTTGAATGTTTGCAGTAAAAATTGGCGGCACAAATCCCGGCAC
CATACGCCGAAAACGCTTCATGCGTAGACGCAGCCGGGTGTACGACGGCG
TCTGAGCATACTCTTTCTTTTGTCCGGCCTCACTTTGTTATTTGCGTGCG
ATTAGTCTGGTGCGCGTAGGTACCCTTATCATGCTTTGCCACGACGTGGC
CGACATCTTCATGGAGACAGCCAAGCTCTTCAACTACGCGCAAAAGCGCT
TCCACTGGTGCCACGTGAGTAGCTGCGTCTAGTCCCCCCCCCGCGGCTCT
CCCCCTCCTTCCGCTGTGGGTCGAGTTAAGTACGTCATGCCTCAAGCTTA
CCGCGCTGTTTCGCCCCTGCCAGTGTTGTACTTAACATGTTGTTCATGTC
GATGTCGTTTGGGAGGGATTTCGCCGCCAAGGTGCCGCTCTGCCTTCCAT
CCACCGCATACCCCCATGTGCGATAGCGTGCACCCGGCGCACTCGTGCCC
AACGGGGACGATCGTTTCTGGAATCGATGCTTTGCCTGGGTGCCCGTACA
GAAACAGCACGTGTGCCCCGCTCTGTCGCTTTTTTGCCCCCTCTCTCTTT
TCTTGCGCTTTTTTCCTTTTTTTTTGCTCTCCCTCACTTCTGGTCCCCGC
TTGTCTCTGCTACAACTCCCGGAACAAAAAACACTTCAAAACGAAACAGC
TGGCGGCCGACGGTTTCTTCTTCGTATTCGCCAGCGTGTTCGGCGCGTCG
AGGCTGTACGTCTTCCCGAAGTACCTTATTTTAAGCGTGTGGCGCACGAC
CGCCCTGAGCGACGTCTTGAGGCACTTCTTCGTTTCCCTGCTGGGCACTC
TGCTCGTTCTACACGTCTTCTGGTGAGTGACGAGGGTGGGATAGGAGGAA
AGTCGAGAGGTTGGGTGTGTGTTTTTCATTGTCTCGTTTTTTTTTTTTTA
TCTTTTTTCCTCTGCATGGACGGTCACGCTCGCGAGAGGATTCCCAAGAT
ATCGGCGGCAAAGCAATGCGTTGGGGTTGTTTGGTGCGGGTACTGTGTTC
CGTTTCCCGCTTAGAGCAGCCTGTGTTGACGGCGAGCTGTTTTGATTCGC
CCCTCGCTTGACCGAACTGAGGATTCTCTAAGAATCGGCTCTCGTAGGCG
TTGGTCGTGTTTTGAGAACATGTCGGGTTCTGGTCAGATTGATTGGCCAT
TCATCGTCTGTTCCCTTGTAAGGTGTCTACATTGCTTTAAAGCAATTGCA
AAGGAAGCAGTTCGTGGGACCAGTATAGTGTAGCGTCCTACGCTCTCCGC
GTGATGTTCTTTTTTTTCAAGGAATTGATGTGTCCCATGCCCCTCCACTC
CGGCATGGATGGCGGTTCGAGGTTAGTACTGCTGTACACAGGAGAAACTT
GAAAAAAAAAAACGCACGCGGATGGATGTCAATCGGATGAATGTCTAACC
AGCGTCTTCTCCTCGTTCCGTCACCAGCATCTTCTCGAGGTGGCTCCCCT
GTGCGGTGGACAACTTCAGGCGCATCTCCCTCTTGTCGCTCTTCTCTCGT
AAAGCGTTCGCCATGTTCTGATTTCATCGTCGTTGTTTCCAGATCGCGAA
GTCCCATTACAGAACGATTCTACCTCCTCACCGCCTCGGGCGGCCGTCGC
CACAGAGCGTGAACGTCGCCCCCGTTTCGTTGAACAAGTTTTGGTTCCCA
CAAAGCCTGTGTTCCGCACCTCAAAGATAGTTTTTCTGCACCGGCGTGTC
TGTCCGTTCCCCTTCTTTGCGATGAACTCGGTCACGACAATGGCGCGGTG
GACGGGCGGGCGGGCGGGGGGTACGCAGGTTTCACCTGATCGTGCGCATG
GTGTACATGTTCGTCTTCCACGGGGTCGAGGGGGACATCCGCAGCGACAA
CGACGAGGGGGTCGTCGACGCCAGCGGCAACGCTTGCAAGCAAGCCGTCC
AGAACGGGAAGAAGAAGAGCAAGACGACTTGA
back to top

Coding sequence (CDS) from alignment at P-lacustris_contig91:227998..238129+

>mRNA_P-lacustris_contig91.15565.1 ID=mRNA_P-lacustris_contig91.15565.1|Name=mRNA_P-lacustris_contig91.15565.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=2280bp|location=Sequence derived from alignment at P-lacustris_contig91:227998..238129+ (Pleurocladia lacustris SAG_25_93)
ATGATGGCGGGCTCAGCAGTAAACGCGGCAGGATTCGTCGAGCTACCTGC
CGGCATGAGGTTCTACTCATTTATGTTCGACGACCAGCATTTGCTGCCTG
GATATGTTGCAACAGGGAAGCTTCCCGCTCCTGCGTCCCTCCTGGTGGGC
ATGGCCGCAGGCGTGGTGCTGACTGCCATGAGGTTCGCTCTCGACGTGGC
CGTGTTCAAGATGATGGCGGGCTCAGCAGTAAACGCGGCAGGATTCGTCG
AGCTACCTGCCGGCATGAGGTTCTACTCATTTATGTTCGACGACCAGCAT
TTGCTGCCTGGATATGTTGCAACAGGGAAGCTTCCCGCTCCTGCGTCCCT
CCTGGTGGGCATGGCCGCAGGCGTGGTGCTGACTGCCATGAGGTTCGCTC
TCGACGTGGCCGTGTTCAAGCCGCTGGCGAGGAGCGTCCTCGGCTTCCCT
CGTAGGTTACGTCGCACCGCCGCGGTGCCCGCCCTCGACACTCTCTGCTC
CAAGTCCAAGTTGCTATCGCCGCTGGCGAGGAGCGTCCTCGGCTTCCCTC
GTAGGTTACGTCGCACCGCCGCGGTGCCCGCCCTCGACACTCTCTGCTCC
AAGTCCAAGTTGCTATCGCCTGAAGAGGTCGTTGACGCGTCAACATCGAC
CGGCCTCTCCCCGGAAGAGGTGAAAGCCTACGCCAAGGAGCGAAGGCTGT
CCGCCCTTGAGGACAAGAAGATCGGGAAGTTCAAGGAGCCTGAAGAGGTC
GTTGACGCGTCAACATCGACCGGCCTCTCCCCGGAAGAGGTGAAAGCCTA
CGCCAAGGAGCGAAGGCTGTCCGCCCTTGAGGACAAGAAGATCGGGAAGT
TCAAGGAGGCGGCGTGGCGCCTGTCGGTGTATTCGTTCCTTGTGGTCTAC
GCGCTCCGGATTACTTCCGGGAAGCCGTGGTTGAAAGATCCCGAGCTGGT
GTGGCGGCGTGGCGCCTGTCGGTGTATTCGTTCCTTGTGGTCTACGCGCT
CCGGATTACTTCCGGGAAGCCGTGGTTGAAAGATCCCGAGCTGGTGTGGG
AAGACTGGCCACTGGGAAACCACGTGGATGGGTTGGGCACGTACTACCAC
GTGGGAATGGCGGTATACTGGCACATGATCATCTTTCAGGGAAGACTGGC
CACTGGGAAACCACGTGGATGGGTTGGGCACGTACTACCACGTGGGAATG
GCGGTATACTGGCACATGATCATCTTTCAGTTCTGGGACACGAGACGGTC
GGACTTCTGGCAGATGCTGGTCCACCACTCGGCCACCCTCTTCCTCCTCA
CGTTCTCCTGGCTGTCCAGTTCTGGGACACGAGACGGTCGGACTTCTGGC
AGATGCTGGTCCACCACTCGGCCACCCTCTTCCTCCTCACGTTCTCCTGG
CTGTCCAGTCTGGTGCGCGTAGGTACCCTTATCATGCTTTGCCACGACGT
GGCCGACATCTTCATGGAGACAGCCAAGCTCTTCAACTACGCGCAAAAGC
GCTTCCACTGGTGCCACTCTGGTGCGCGTAGGTACCCTTATCATGCTTTG
CCACGACGTGGCCGACATCTTCATGGAGACAGCCAAGCTCTTCAACTACG
CGCAAAAGCGCTTCCACTGGTGCCACCTGGCGGCCGACGGTTTCTTCTTC
GTATTCGCCAGCGTGTTCGGCGCGTCGAGGCTGTACGTCTTCCCGAAGTA
CCTTATTTTAAGCGTGTGGCGCACGACCGCCCTGAGCGACGTCTTGAGGC
ACTTCTTCGTTTCCCTGCTGGGCACTCTGCTCGTTCTACACGTCTTCTGC
TGGCGGCCGACGGTTTCTTCTTCGTATTCGCCAGCGTGTTCGGCGCGTCG
AGGCTGTACGTCTTCCCGAAGTACCTTATTTTAAGCGTGTGGCGCACGAC
CGCCCTGAGCGACGTCTTGAGGCACTTCTTCGTTTCCCTGCTGGGCACTC
TGCTCGTTCTACACGTCTTCTGGTTTCACCTGATCGTGCGCATGGTGTAC
ATGTTCGTCTTCCACGGGGTCGAGGGGGACATCCGCAGCGACAACGACGA
GGGGGTCGTCGACGCCAGCGGCAACGCTTGCAAGCAAGCCGTCCAGAACG
GGAAGAAGAAGAGCAAGACGACTTGAGTTTCACCTGATCGTGCGCATGGT
GTACATGTTCGTCTTCCACGGGGTCGAGGGGGACATCCGCAGCGACAACG
ACGAGGGGGTCGTCGACGCCAGCGGCAACGCTTGCAAGCAAGCCGTCCAG
AACGGGAAGAAGAAGAGCAAGACGACTTGA
back to top