mRNA_P-lacustris_contig1215.1617.1 (mRNA) Pleurocladia lacustris SAG_25_93

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-lacustris_contig1215.1617.1
Unique NamemRNA_P-lacustris_contig1215.1617.1
TypemRNA
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Homology
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BLAST of mRNA_P-lacustris_contig1215.1617.1 vs. uniprot
Match: D7FNL4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNL4_ECTSI)

HSP 1 Score: 694 bits (1792), Expect = 1.040e-233
Identity = 349/431 (80.97%), Postives = 377/431 (87.47%), Query Frame = 2 
Query:  464 GGKHFDKNAPAQLRQATQKHTGSRVRPATNFAFGVIRGDEFHLTPVHATMQMRPSFQHIDEAKAQEIEMDLDDPDNSGAKAAERPQQVSFKKKESEKATAARKSSYAYKKSIEDAEPWVALEVYGQNDDRSLDEFSRMFVYGDDDDDAGVRRGTITKEFPPCERYLQGLDYMEEYDENGESFSAGGRGRSLDDSIDLVTAGMGSYSPVKIPTPPVQNLAGDAKVVGYLKLAHLVPFGMLLDVTNMSPDAVMEALSVEGRQQGLLLRGNWAARASDVWPRGPPHAADCLSVAQCLLHKYGAVSRPNLQRRFPELDPVTLREVLSHIAELDTVDRRWVPKVKDGITFGMEHPDLVELEEERWALQESSLKERLGEDVLAPPTCRTFEPFVGILAAATKAASTASALAARAPASRAMPSFGVLRPGGGTVKREV 1756
            GGKH+DKNAP QLR+ATQKHTGSRVRPATNFAFGVIR DE HLTP+HATMQMRP FQHIDEAKAQEIEMDLDDPDN G K AE+PQQVSFKKKESE+ATAARKSSYAYKKSIEDAEPWVALEV+GQNDDRSLDEFSRMFV    DDDA   RGT TKEFPPCERYLQGLDYMEEYDENGESFSAGGRGRSL DSIDLVTAG G+YSPV +P  P   L GDAKVVGYLKLAHLVPF MLLDVTNMSPDAV++ALSVEGRQ+GLL+RGNWAA  +DVWPRGPPHAADCLSVAQCLLH+YGAVSRP+LQRRFPEL+PVTL+E+L  IAELDTVDRRWVPKVKDG+TFGMEHP++VELEEERW L ES LKERLG+D+LAPP+C TF  FV +L AA +A         RAP SRA+PSFGVLR G    K E+
Sbjct:  119 GGKHYDKNAPGQLRRATQKHTGSRVRPATNFAFGVIRSDELHLTPIHATMQMRPCFQHIDEAKAQEIEMDLDDPDNGGTKEAEKPQQVSFKKKESERATAARKSSYAYKKSIEDAEPWVALEVHGQNDDRSLDEFSRMFV----DDDASANRGTTTKEFPPCERYLQGLDYMEEYDENGESFSAGGRGRSLADSIDLVTAGTGTYSPVNLPAAPAHQLGGDAKVVGYLKLAHLVPFSMLLDVTNMSPDAVLQALSVEGRQKGLLMRGNWAALPADVWPRGPPHAADCLSVAQCLLHRYGAVSRPDLQRRFPELEPVTLKELLLRIAELDTVDRRWVPKVKDGLTFGMEHPEIVELEEERWTLHESILKERLGDDILAPPSCPTFGTFVKVLEAAARAXXXXXXXXXRAPMSRAVPSFGVLRRGEVAAKEEI 545
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BLAST of mRNA_P-lacustris_contig1215.1617.1 vs. uniprot
Match: A0A836CI66_9STRA (Sin-like protein conserved region-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CI66_9STRA)

HSP 1 Score: 151 bits (382), Expect = 2.130e-34
Identity = 128/408 (31.37%), Postives = 186/408 (45.59%), Query Frame = 2 
Query:  467 GKHFDKNAPAQLRQATQKHTGSRVRPATNFAFGVIRGDEFHLTPVHATMQMRPSFQHIDEAKAQEIEMDLDDPDNSGAKAAERP-----QQVSFKKKESEKATAARKSSYAYKKSIEDAEPWVALEVYGQNDDRSLDEFSRMFVYGDDDDDAGVRRGTITKEFPPCERYLQGLDYMEEYDENGESFSA--GGRGRSLDDSIDLVTA----------------------GMGSYSPVKIPTPPVQNLAGDAKVVGYLKLAHLVPFGMLLDVTNMSPDAVMEALSVEGRQQGLLLRGNWAARASDVWPR--------GPPHAADCLSVAQCLLHKYGAVSRPNLQRRFPELDPVTLREVLSHIAELDTVDRRWVPKVKDGITFGMEHPDLVELEEERWALQESSLKERLG 1579
            GK+FD  AP  L      H  + V  ATN+A GV+R +E HLTP+   +QMRP+F+H+D      I+  +++PD+    AAE+P     +QV FK+KE+E+AT AR+ SYAYK+  EDAE WV L V+      + DEF  MF         G R   I    P    YL+ LD++      G   +A   G G S    +DL  A                      G+G  +P  +P   +  L G   +  Y++ A ++   ML +V  ++ DA   A++ E     + +RG W  R+  + P                    A  LLH +G VSR  LQRRF  +   TL+ VL  +A LD   + W  KV+D     +  P +    +  W    ++L    G
Sbjct:   69 GKNFDPAAPEHLLLEELTHAAAAVPAATNYAIGVVRDNELHLTPLSGILQMRPAFRHVD------IQAAIEEPDDDDRAAAEKPVAGEPRQVMFKRKETERATQARQRSYAYKRDREDAERWVDLAVHDAASAHARDEFENMFC--------GDRARPICF-LPGPAAYLRRLDHLHP----GADAAALPAGTGDSAA-PLDLAAADGXXXXXXXXXXXXGGGTGASYGVGHAAP--LPVDQLSALKGVGALRAYVRAAVVITHDMLKEVAEVASDA---AVARELSGFAVPVRGAWVLRSERLLPATAAGXXXXXXXXXXRARDAALALLHAHGGVSRAALQRRFEIVPGATLKTVLEGVAALDRGLQCWELKVEDTFDLALALPGVAAAADAEWRAALAALAAEWG 451
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BLAST of mRNA_P-lacustris_contig1215.1617.1 vs. uniprot
Match: A0A7S1TWY4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TWY4_9STRA)

HSP 1 Score: 107 bits (267), Expect = 1.920e-21
Identity = 68/184 (36.96%), Postives = 104/184 (56.52%), Query Frame = 2 
Query:  464 GGKHFDKNAPAQLRQATQKHTGSRVRPATNFAFGVIRGDEFHLTPVHATMQMRPSFQHIDEAKAQEIEMDLDDPDN-SGAKAAERP-----QQVSFKKKESEKATAARKSSYAYKKSIEDAEPWVALEVYGQNDDRSLDEFSRMFVYGDDDDDAGVRRGTITKEF--PPCER---YLQGLDYME 982
            GG H+D+ AP+ +R + Q   G+   P TN+A GV  G   HLTP+  T Q+RPSF H+ + +  ++E+D DD     G KAA  P     Q+V + KKESE+A A  + S+A+ ++  +AEPWV LEV G + D + + F +++   +++D AG        E   P  ++   YL  L YM+
Sbjct:   65 GGDHYDREAPSNIRTSQQVLKGAAAAPQTNYAVGVFSGGSLHLTPLRETFQLRPSFAHV-KNRQDDMELDTDDEXXXEGNKAAAEPAKPALQEVQYVKKESERAMAQHRRSFAHHRAQLEAEPWVPLEVSGPSSDVAEELFPQLYAPFNEEDAAGGEAAANDAEMLLPSRDKALAYLDSLQYMD 247
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BLAST of mRNA_P-lacustris_contig1215.1617.1 vs. uniprot
Match: A0A024FUG9_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024FUG9_9STRA)

HSP 1 Score: 107 bits (267), Expect = 3.690e-21
Identity = 92/356 (25.84%), Postives = 160/356 (44.94%), Query Frame = 2 
Query:  470 KHFDKNAPAQLRQATQKHTGSRVRPATNFAFGVIRGDEFHLTPVHATMQMRPSFQHIDEAKAQEIEMDLDDPDNSGAKAAERPQ-QVSFKKKESEKATAARKSSYAYKKSIEDAEPWVALEVYGQNDDRSLDEFSRMFVYGDDDDDAGVRRGTITKEFPPCERYLQGLDYMEEYDENGESFSAGGRGRSLDDSIDLVTAGMGSYSPVKIPTPPVQNLAGDA----KVVGYLKLAHLVPFGMLLDV-TNMSPDAVMEALSVEGRQQGLLLRGNWAARASDVWPRGPPHAADCLSVAQCLLHKYGAVSRPNLQRRFPELDPVTLREVLSHIAELDTVDRRWVPKVKDGITFGMEHPDL 1519
            +++D++A   L+Q   +   S+V+  +N+A GV+R  + HLTP+H+ +QMRPS  HID A    +E +L D +       +  Q Q  FKKK  E++  A ++SY +KK   +AE W  L ++ Q+++ +LDEF   F           R  TI  E  P E YL  L Y                                 ++ VKI   P++++   +    +V+  L+   +  F  +  + ++ S + + + L     +  + +RG        ++P+     A   +V      +  A+SR  L  ++ +LDP   +E L  IA LD   R W  K++   T   + P++
Sbjct:   64 QNYDRDAEEYLQQRYLRLQSSQVKEQSNYAIGVLRQGQLHLTPLHSVLQMRPSLLHIDNA----VEEELSDEEKEMVDDTQVKQVQFEFKKKHGERSMKALQNSYQHKKQQINAERWKDLSIFEQSNEHTLDEFENFF---------SEREDTIVSELSPSE-YLHALKYR--------------------------------HANVKIDEKPIESIQNASTLSQRVLQALQTDRISTFSRICAIFSDQSAEEIAQTLL----EVAIAVRGR-------LFPKCLDEKAHIQNVILQNFDRRRAISREILNEKY-DLDPDEAKECLKEIASLDPKTRSWSLKLERDDTLSNDFPEI 361
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BLAST of mRNA_P-lacustris_contig1215.1617.1 vs. uniprot
Match: H3GH35_PHYRM (Uncharacterized protein n=2 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GH35_PHYRM)

HSP 1 Score: 106 bits (265), Expect = 1.090e-20
Identity = 107/360 (29.72%), Postives = 163/360 (45.28%), Query Frame = 2 
Query:  470 KHFDKNAPAQLRQATQKHTGSRVRPATNFAFGVIRGDEFHLTPVHATMQMRPSFQHIDEAKAQEIEMDLDDPDNSGAKAAERPQ-QVSFKKKESEKATAARKSSYAYKKSIEDAEPWVALEVYGQNDDRSLDEFSRMFVYGDDDDDAGVRRGTITKEFPPCERYLQGLDYM------------------EEYDENGESFSAGGRGRSLDDSIDLVTAGMGSYSPVKIPTPPVQNLAGDAKVVGYLKLAHLVPFGMLLDVTNMSPDAVMEALS-----VEGR---QQGLLLRGNWAARASDVWPRGPPHAADCLSVAQCLLHKYGAVSRPNLQRRFPELDPVTLREVLSHIAELDTVDRRW 1468
            +HFD++A   L+Q   +   S V   TN+A GV R  + HLTP+ + MQMRPS  HID+A  +E E D++  +   A AAE  + Q  FKKK+SE+A +A ++SYAYKK   DAE W+ L+V  ++   + DEF  +F   +++         +     P E Y++ + Y                   EE +E  +      +G  L+  +D        YS V      ++ LA D       ++ H      LL  ++ S + V++AL      V GR      L+ RG    RA D             S+ + L      VSR +L  +F  LD    + +LS  A L+   R+W
Sbjct:   69 EHFDQDAEEYLKQKHLRLQSSSVPALTNYAVGVFRQGQLHLTPLSSVMQMRPSLSHIDDAVNEEEE-DMEVEEKVEAPAAEMKEVQFQFKKKQSERALSAIQNSYAYKKQQIDAENWIELQVQDKSSSGADDEFENLFSEKEEE---------VVSSMTPDE-YIKAMQYRAMASVDNPAAPSNPAQTDEEDEEQKDEAMEPAKGHLLE-GVDA------KYSDV------LRLLATD-------QILHFDTLAKLL--SSRSEEEVLDALKHVAVHVRGRLLPSSALICRGEATVRARD-------------SIIKALAKTPSGVSRMDLVEKF-SLDADVAKTILSEFAVLEPESRKW 381
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BLAST of mRNA_P-lacustris_contig1215.1617.1 vs. uniprot
Match: F0WMY9_9STRA (DNAdirected RNA polymerase III subunit RPC5like protein putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WMY9_9STRA)

HSP 1 Score: 99.8 bits (247), Expect = 1.390e-18
Identity = 99/355 (27.89%), Postives = 156/355 (43.94%), Query Frame = 2 
Query:  470 KHFDKNAPAQLRQATQKHTGSRVRPATNFAFGVIRGDEFHLTPVHATMQMRPSFQHIDEAKAQE-IEMDLDDPDNSGAKAAERPQQVSFKKKESEKATAARKSSYAYKKSIEDAEPWVALEVYGQNDDRSLDEFSRMFVYGDDDDDAGVRRGTITKEFPPCERYLQGLDYMEEYDENGESFSAGGRGRSLDDSIDLVTAGMGSYSPVKIPTPPVQNLAGDAKVVGYLKLAHLVPFGMLLDV-TNMSPDAVMEALSVEGRQQGLLLRGNWAARASDVWPRGPPHAADCLSVAQCLLHKY---GAVSRPNLQRRFPELDPVTLREVLSHIAELDTVDRRWVPKVKDGITFGMEHPDL 1519
            +++D++A   L+Q   +   S+V   +N+A G+IR  + HLTPVH+ +QMRPS  HIDEA  +E  E + +  D S  K      Q  FKKK +E++  A ++SY +KK   +AE W  L ++ Q+++ +LDEF   F           R   I  E    E YL+ L Y                 R+ +  +D    G        I TP   +     K++  LK  ++  F  L  +    S + +  AL        + +RG    +  D   R          +   LL  +    A+SR  +  ++  LD +  +E L  IA LD + R W  K++   T  ME  D+
Sbjct:   64 QNYDRDAEEYLQQRYLRLQSSQVVEQSNYAIGMIRQGQLHLTPVHSVLQMRPSLLHIDEALEEERSEEEKETIDESQVKEV----QFEFKKKHNERSMKALQNSYQHKKQQINAERWKELTIFEQSNEHTLDEFEGFF---------SEREEKIVSELSSSE-YLETLKY-----------------RNANAKVDEKPMG-------SIQTPSTLS----HKLLQALKTDYISTFSRLCAIFVEESANEIARALV----DVAVAVRGRLFPKCFDEKSR----------IRNILLRNFVRNRAISRAEMDEKY-NLDALEAKECLQEIATLDPITRLWSLKLERDDTLFMEFEDI 361
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BLAST of mRNA_P-lacustris_contig1215.1617.1 vs. uniprot
Match: A0A8K1CTI8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CTI8_PYTOL)

HSP 1 Score: 100 bits (248), Expect = 1.440e-18
Identity = 101/352 (28.69%), Postives = 162/352 (46.02%), Query Frame = 2 
Query:  470 KHFDKNAPAQLRQATQKHTGSRVRPATNFAFGVIRGDEFHLTPVHATMQMRPSFQHIDEAKAQEIEMDLD---DPDNSGAKAAERPQQVSFKKKESEKATAARKSSYAYKKSIEDAEPWVALEVYGQNDDRSLDEFSRMFVYGDDDDDAGVRRGTITKEFPPCERYLQGLDYMEEYDENGESFSAGGRGRSLDDSIDLVT-AGMGSYSPVKIPTPPVQNLAGDAKVVGYLKLAHLVPFGMLLDVTNMSP-DAVMEALSVEGRQQGLLLRGNWAARASDVWPRGPPHAADCLSVAQCLLHKYG----AVSRPNLQRRFPELDPVTLREVLSHIAELDTVDRRWVPKVKDGITF 1498
            +HFD +A   L+Q   +   S V   TN+A GV R  + HLTP+   +QMRPS  HIDEA   ++E D+D   + +   A+ A +  Q  FKKK+SE+A +A ++SYAYKK   +AE W  L V+ +    +  EF  +F   ++D        T+T      E YL+ L Y       G + +  GR  +  D+ +    +   S  P  +    +Q L  D          H++ F  L+++    P D + EA+    R   + +RG    ++S V       + +     + +L++       VSR  L  +   LD   ++++L + A LD   R+W  K     TF
Sbjct:   68 EHFDGDAEDYLKQKHLRLQSSSVPALTNYAVGVFREGQLHLTPISGVLQMRPSLAHIDEA-VDDVEEDVDMAMEEEQKEAENAVKEVQFQFKKKQSERAISAIQNSYAYKKQQINAETWRELRVFDKESATTETEFENLFSEREED-----VISTMT-----TEEYLRALRYRHA----GAAAATTGRPETTSDAEEKEERSATASVDPNHLEV--LQRLMTD----------HILHFSDLVELLPSRPEDELAEAV----RHVAVSIRGRLLPKSSFVCS-----SEEATRTREAILNELSKKPVGVSRMELVEKHG-LDADAVKKILENFAVLDQATRQWSFKRPHDDTF 382
[Close]
BLAST of mRNA_P-lacustris_contig1215.1617.1 vs. uniprot
Match: A0A0N7L4J2_PLAHL (Dna-directed rna polymerase iii subunit rpc5-like protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L4J2_PLAHL)

HSP 1 Score: 99.8 bits (247), Expect = 1.910e-18
Identity = 95/356 (26.69%), Postives = 159/356 (44.66%), Query Frame = 2 
Query:  470 KHFDKNAPAQLRQATQKHTGSRVRPATNFAFGVIRGDEFHLTPVHATMQMRPSFQHIDEAKAQEIEMDLDD---PDNSGAKAAERPQQVSFKKKESEKATAARKSSYAYKKSIEDAEPWVALEVYGQNDDRSLDEFSRMFVYGDDDDDAGVRRGTITKEFPPCERYLQGLDYMEEYDENGESFSAGGRGRSLDDSIDLVTAGMGSYSPVKIPTP--PVQNLAGDAKVVGYLKLAHLVPFGMLLDVTNMSPDAVMEALSVEGRQQGLLLRGNWAARASDVWPRGPPHAADCLSVAQCLLHKYGAVSRPNLQRRFPELDPVTLREVLSHIAELDTVDRRWVPKVKDGITFGMEHPDLV 1522
            +HFD++A   ++Q   +   S V   +N+A GV R  + HLTP+ + MQMRPS  HID+A A E E DL++   P  +  K      Q  FKKK+SE+A +A ++SYAYKK   DAE W+ L+V  +N   + +EF  +F   +++         +     P ++Y++ L Y     ++  + +      + D+  +     +    P  + T    VQ L    +++ +  LA L+P     D+ +      + A         L+ RG    R  +              + Q L      V+R  L   F  LD   ++ +LS +A L++  R W  ++    +F    P L 
Sbjct:   63 EHFDQDAEDYIKQKHLRLQSSSVPALSNYAVGVFRQGQLHLTPLTSIMQMRPSLSHIDDA-ANEEEEDLEEKIEPPPAELKEV----QFQFKKKQSERAISAIQNSYAYKKQQIDAENWIELQVQDKNSCGAEEEFENLFSEKEEE---------VVSTMTP-DQYIKALQYRTVASDDKTASNNPAHVHTDDEEKEDAMDFIPQILPDGLDTKYLEVQRLLKTDQIMHFDMLATLLPTLSEKDICDALKHIAIHARGRLLPISALVCRGETMVRTRNY-------------IIQALSQAPNGVTRTELAETF-SLDADAVKTILSEVAVLESTTRTWKFRLGPDDSFIQRFPTLA 389
[Close]
BLAST of mRNA_P-lacustris_contig1215.1617.1 vs. uniprot
Match: W7TNB1_9STRA (Dna-directed rna polymerase iii subunit rpc5 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TNB1_9STRA)

HSP 1 Score: 98.6 bits (244), Expect = 2.240e-17
Identity = 118/447 (26.40%), Postives = 181/447 (40.49%), Query Frame = 2 
Query:  473 HFDKNAPAQLRQATQKHTGSRVRPATNFAFGVIRGDEFHLTPVHATMQMRPSFQHID-----------------EAKAQEIEMDLDDPDNSGAKAAE-----------------RPQQVSFKKKESEKATAARKSSYAYKKSIEDAEPWVALEVYGQNDDRSLDEFSRMFVYGDDDDDAGVR---RGTITKEFPPCERYLQGLDYMEEYDENGESFSAGGRGRSLDDSID--------LVTAGM--------GSYSPVKI-----------PTPP-----VQNLAGDAKVVGYLKLAHLVPFGMLLDVTN-----------MSPDAV-------MEALSVEGRQQ-GLLLRGNWAARASDVWPRGP--PHAADCLSVAQCLLHKYGAVSRPNLQRRFPELDPVTLREVLSHIAELDTVDRRWVPKVKDGITFGMEHPDLVELEEERW 1543
            H D+NAP  LR    K   S + P T +A G +R    HLTP+    QMR S +H D                 E   + +E   D  ++ G   ++                 + + + +KK+ESEKA AAR++SYA+KK  E+ EPW  L V+  +      +  RMF   ++D    ++    GTI               Y++ Y       +A  RG  L  +ID         + AGM        G  + VK            P  P     + ++ G  +V   L  AH+V F  +L+++             +P+ V       + AL++E  ++  +L+RGNW  R S ++       HA D L +   LL +YG V+R          D  + R +LS IA LD   R WV    D I F    P++   ++  W
Sbjct:  107 HIDENAPRHLRLDRIKVQSSYLDPMTTYAVGALRDGALHLTPLAGIFQMRASSEHADAAPEDREDDVLERVLLAERNGRRMEEGGDATESEGVGPSKATASSASTGGGEGAPPIKLRHIEYKKRESEKAAAARRTSYAFKKQQEEGEPWRELLVHPLSSQTGQTDLERMFCTREEDMGRKIKFQGGGTI---------------YLDLYRSQKSKAAARERGEGLSRTIDHQQQHSAAFLDAGMDAGDGVIDGDETAVKANLSSLAVGNRAPRDPSIGALIPHMQGAEQVATILARAHVVSFEQVLELSGGNGSWPPHGGATTPEGVDHATGSAVSALALERLKKCAVLVRGNWV-RKSILYGLSARLSHARDALLL---LLDRYGGVNRQQFGAAAGLSDEES-RGLLSPIATLDKAARMWVMVPPDDIIFLTAFPEVALQQQRLW 533
[Close]
BLAST of mRNA_P-lacustris_contig1215.1617.1 vs. uniprot
Match: A0A484DWJ2_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DWJ2_BRELC)

HSP 1 Score: 96.3 bits (238), Expect = 2.830e-17
Identity = 92/358 (25.70%), Postives = 159/358 (44.41%), Query Frame = 2 
Query:  470 KHFDKNAPAQLRQATQKHTGSRVRPATNFAFGVIRGDEFHLTPVHATMQMRPSFQHIDEAKAQEIEMDLDDPDNSGAKAAERPQ-QVSFKKKESEKATAARKSSYAYKKSIEDAEPWVALEVYGQNDDRSLDEFSRMFVYGDDDDDAGVRRGTITKEFPPCERYLQGLDYMEEYDENGESFSAGGR------GRSLDDSIDLVTAGMGSYSPVKIPTPPVQNLAGDAKVVGYLKLAHLVPFGMLLDVTNMSPDAVMEALSVEGRQQGLLLRGNWAARASDVWPRGPPHAADCLSVAQCLLHKYGAVSRPNLQRRFPELDPVTLREVLSHIAELDTVDRRWVPKVKDGITFGMEHPDLV 1522
            +HFD++A   ++Q T +   S V   +N+A GV R  + HLTP+ + +QMRPS  +ID+A  +E E+D+D  +      AE  + Q  FKKK+SE+A +A ++SYA+KK   DAE W+ L+V+  +   + DEF  +F   +++         I  +  P + Y++ L Y      +  +  A            +DD+++ +   +     V      V  +    +++ +  LA L+P     D+ +      +  L        L+ RG    RA +              + + L      VSR  L ++   L+    + +LS  A LD   R+W  ++     F    P L 
Sbjct:   64 EHFDQDAEDYIKQKTLRLQSSCVPALSNYAVGVFRQGQLHLTPLSSILQMRPSLSYIDDAINEE-EIDIDMEEKVEPPPAEMKEVQFQFKKKQSERALSAIQNSYAFKKQQIDAENWIELQVHELSTAGADDEFENLFSEKEEE---------IVSDMTPAQ-YIRALQYRALATADKSAALANPAQVDAEDNTEMDDTMEPIKGHL--LDGVNAKYSDVLRILATDQIMHFNTLALLLPTHKEEDLIDALEHVAIHVLGRLLPASALIFRGETTIRARN-------------EIIKALAKSPTGVSRTELVKQ-TLLEASIAKNILSEFAILDPATRKWSFRLGPDNLFAKRFPTLA 394
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig1215.1617.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FNL4_ECTSI1.040e-23380.97Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CI66_9STRA2.130e-3431.37Sin-like protein conserved region-domain-containin... [more]
A0A7S1TWY4_9STRA1.920e-2136.96Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A024FUG9_9STRA3.690e-2125.84Uncharacterized protein n=1 Tax=Albugo candida Tax... [more]
H3GH35_PHYRM1.090e-2029.72Uncharacterized protein n=2 Tax=Phytophthora ramor... [more]
F0WMY9_9STRA1.390e-1827.89DNAdirected RNA polymerase III subunit RPC5like pr... [more]
A0A8K1CTI8_PYTOL1.440e-1828.69Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A0N7L4J2_PLAHL1.910e-1826.69Dna-directed rna polymerase iii subunit rpc5-like ... [more]
W7TNB1_9STRA2.240e-1726.40Dna-directed rna polymerase iii subunit rpc5 n=2 T... [more]
A0A484DWJ2_BRELC2.830e-1725.70Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig1215contigP-lacustris_contig1215:2138..14090 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score609.0
Seed ortholog evalue1.6e-171
Seed eggNOG ortholog2880.D7FNL4
Preferred namePOLR3E
KEGG rclassRC00065,RC02795
KEGG koko:K00381,ko:K03026,ko:K14721
KEGG ReactionR00435,R00441,R00442,R00443,R00858
KEGG Pathwayko00230,ko00240,ko00920,ko01100,ko01120,ko03020,ko04623,ko05169,map00230,map00240,map00920,map01100,map01120,map03020,map04623,map05169
KEGG ModuleM00176,M00181
Hectar predicted targeting categoryother localisation
GOsGO:0000428,GO:0003674,GO:0003824,GO:0003899,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005666,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006383,GO:0006399,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009304,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0030880,GO:0031974,GO:0031981,GO:0032774,GO:0032991,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0034660,GO:0042797,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0046483,GO:0055029,GO:0061695,GO:0070013,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0098781,GO:0140098,GO:1901360,GO:1901362,GO:1901576,GO:1902494,GO:1990234
EggNOG free text desc.transcription by RNA polymerase III
EggNOG OGsKOG2354@1,KOG2354@2759
Ec32 ortholog descriptionDNA-directed RNA polymerase III subunit Rpc5
Ec32 orthologEc-01_005040.1
EC1.8.1.2
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEbr01611,ko00000,ko00001,ko00002,ko01000,ko03021
Exons12
Model size3268
Cds size1215
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig1215.1617.1prot_P-lacustris_contig1215.1617.1Pleurocladia lacustris SAG_25_93polypeptideP-lacustris_contig1215 7096..12647 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815534.638563-UTR-P-lacustris_contig1215:2137..21641622815534.638563-UTR-P-lacustris_contig1215:2137..2164Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig1215 2138..2164 +
1693493595.28316-UTR-P-lacustris_contig1215:2137..21641693493595.28316-UTR-P-lacustris_contig1215:2137..2164Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig1215 2138..2164 +
1622815534.6525176-UTR-P-lacustris_contig1215:2449..27741622815534.6525176-UTR-P-lacustris_contig1215:2449..2774Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig1215 2450..2774 +
1693493595.2950385-UTR-P-lacustris_contig1215:2449..27741693493595.2950385-UTR-P-lacustris_contig1215:2449..2774Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig1215 2450..2774 +
1622815534.6686392-UTR-P-lacustris_contig1215:4641..47051622815534.6686392-UTR-P-lacustris_contig1215:4641..4705Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig1215 4642..4705 +
1693493595.3075776-UTR-P-lacustris_contig1215:4641..47051693493595.3075776-UTR-P-lacustris_contig1215:4641..4705Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig1215 4642..4705 +
1622815534.6844506-UTR-P-lacustris_contig1215:5313..54311622815534.6844506-UTR-P-lacustris_contig1215:5313..5431Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig1215 5314..5431 +
1693493595.3180423-UTR-P-lacustris_contig1215:5313..54311693493595.3180423-UTR-P-lacustris_contig1215:5313..5431Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig1215 5314..5431 +
1622815534.6949766-UTR-P-lacustris_contig1215:7019..70951622815534.6949766-UTR-P-lacustris_contig1215:7019..7095Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig1215 7020..7095 +
1693493595.3260386-UTR-P-lacustris_contig1215:7019..70951693493595.3260386-UTR-P-lacustris_contig1215:7019..7095Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig1215 7020..7095 +
1622815534.797152-UTR-P-lacustris_contig1215:12647..140901622815534.797152-UTR-P-lacustris_contig1215:12647..14090Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig1215 12648..14090 +
1693493595.4201562-UTR-P-lacustris_contig1215:12647..140901693493595.4201562-UTR-P-lacustris_contig1215:12647..14090Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig1215 12648..14090 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815534.7079785-CDS-P-lacustris_contig1215:7095..71371622815534.7079785-CDS-P-lacustris_contig1215:7095..7137Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1215 7096..7137 +
1693493595.3339038-CDS-P-lacustris_contig1215:7095..71371693493595.3339038-CDS-P-lacustris_contig1215:7095..7137Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1215 7096..7137 +
1622815534.719649-CDS-P-lacustris_contig1215:8038..82151622815534.719649-CDS-P-lacustris_contig1215:8038..8215Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1215 8039..8215 +
1693493595.3450181-CDS-P-lacustris_contig1215:8038..82151693493595.3450181-CDS-P-lacustris_contig1215:8038..8215Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1215 8039..8215 +
1622815534.7292118-CDS-P-lacustris_contig1215:8451..86511622815534.7292118-CDS-P-lacustris_contig1215:8451..8651Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1215 8452..8651 +
1693493595.357765-CDS-P-lacustris_contig1215:8451..86511693493595.357765-CDS-P-lacustris_contig1215:8451..8651Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1215 8452..8651 +
1622815534.738638-CDS-P-lacustris_contig1215:10035..101381622815534.738638-CDS-P-lacustris_contig1215:10035..10138Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1215 10036..10138 +
1693493595.3660412-CDS-P-lacustris_contig1215:10035..101381693493595.3660412-CDS-P-lacustris_contig1215:10035..10138Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1215 10036..10138 +
1622815534.748031-CDS-P-lacustris_contig1215:10259..104801622815534.748031-CDS-P-lacustris_contig1215:10259..10480Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1215 10260..10480 +
1693493595.3747146-CDS-P-lacustris_contig1215:10259..104801693493595.3747146-CDS-P-lacustris_contig1215:10259..10480Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1215 10260..10480 +
1622815534.7603512-CDS-P-lacustris_contig1215:10915..110261622815534.7603512-CDS-P-lacustris_contig1215:10915..11026Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1215 10916..11026 +
1693493595.383242-CDS-P-lacustris_contig1215:10915..110261693493595.383242-CDS-P-lacustris_contig1215:10915..11026Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1215 10916..11026 +
1622815534.7707586-CDS-P-lacustris_contig1215:11530..116331622815534.7707586-CDS-P-lacustris_contig1215:11530..11633Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1215 11531..11633 +
1693493595.3940868-CDS-P-lacustris_contig1215:11530..116331693493595.3940868-CDS-P-lacustris_contig1215:11530..11633Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1215 11531..11633 +
1622815534.7830505-CDS-P-lacustris_contig1215:12389..126471622815534.7830505-CDS-P-lacustris_contig1215:12389..12647Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1215 12390..12647 +
1693493595.403963-CDS-P-lacustris_contig1215:12389..126471693493595.403963-CDS-P-lacustris_contig1215:12389..12647Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1215 12390..12647 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-lacustris_contig1215.1617.1

>prot_P-lacustris_contig1215.1617.1 ID=prot_P-lacustris_contig1215.1617.1|Name=mRNA_P-lacustris_contig1215.1617.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=405bp
MQMRPSFQHIDEAKAQEIEMDLDDPDNSGAKAAERPQQVSFKKKESEKAT
AARKSSYAYKKSIEDAEPWVALEVYGQNDDRSLDEFSRMFVYGDDDDDAG
VRRGTITKEFPPCERYLQGLDYMEEYDENGESFSAGGRGRSLDDSIDLVT
AGMGSYSPVKIPTPPVQNLAGDAKVVGYLKLAHLVPFGMLLDVTNMSPDA
VMEALSVEGRQQGLLLRGNWAARASDVWPRGPPHAADCLSVAQCLLHKYG
AVSRPNLQRRFPELDPVTLREVLSHIAELDTVDRRWVPKVKDGITFGMEH
PDLVELEEERWALQESSLKERLGEDVLAPPTCRTFEPFVGILAAATKAAS
TASALAARAPASRAMPSFGVLRPGGGTVKREVAGAGAGASGGAGWGLNTR
RPSP*
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mRNA from alignment at P-lacustris_contig1215:2138..14090+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-lacustris_contig1215.1617.1 ID=mRNA_P-lacustris_contig1215.1617.1|Name=mRNA_P-lacustris_contig1215.1617.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=11953bp|location=Sequence derived from alignment at P-lacustris_contig1215:2138..14090+ (Pleurocladia lacustris SAG_25_93)
CTAGGGCACGCGATCGACTCGACGCAGGTGACAGAAAGAGGCCATACTTT
GATGTCGACGCGTGATTTCCACCAACCGCTAGCAAAGGTGCTGCTGTTGC
TGACAGAGGAGACATTAGAGTACGAAGACCTGACAGTCCCTTGTACACCC
CACAGAGGCGGTGTCCTTGATTTCTCCTGATTGATTGCAGCGGCTGTTGG
TCGTTTTTCATGTGTTGCACTCAGCCGTTGTGGAAATCCGGTGGCTGACC
TTGGTGTGCGTTTCATGATGCATTCCTGTCTGTAATTACCGTTGTTTGAA
CCGCCCCAGCAGCGTGTACGGGCTGCAATCTCTGGGGCTGCATTTGGCTG
CAGTTTCAGGACGGAAAACTCGAGAGACAGACCCGCAGCAGCAGCAGTCC
CGCATCCAGTAGGACGTCGATAATCATGGACCCCTCGATGGACGATCCCA
TGTCTGACGAGGAAGAGGAAGAGGTCGAAGACATAGACCTTCCACCAGGC
GGTAGCCGAAGCGGCAAGGGACTGGTTGTCGAAGGAGTTGAAATCGCGGA
GGAGGACGTGTACGCTTACGGTGATCCCGACGATCCGCTGGATAGGGTGC
TGGACGTTTACCTCGCGGACGAGCTGGAGGATCACCTGTGAGTGTGCCAT
CGGTGCGTCGTTTAAGTAGTGGTATCAGTCATACCTTGTCCCCAGAAATG
GGAGCATCATATTTTTATATATTGATTTGTAATTCACTATATACGGAGTA
TATATTCCAAGGACGGTCGTCGTCGTTGTCGTTGTGTCTCAATTACTCGG
AGTACTTGAAATTTGAGCAGGGTTCAAAAGTTCCATCATTTTTTTTCCCC
CCAGCAAACATCAAGTCGGCGTTATCGCACAACACCGAGTCAGAAGTAAA
ACACACCCTCTTCGTAAAGGCATACCCGCCTGAGAGAGAGACAGCATTCG
CAGAACTCCCAAGGTGCTGGGGTATATGCTGGTGTGACCTGCTTGCGGGT
GTGCAGGCAAGGGGACACGCCGCTGTTGTACAACGTGAGATACAGAACTC
CGCAATGTAGACCCAGGGCAGCAAACATGTTTTACTGCTGGTGTACTCAC
AGCGGTAGTTAGCTGCTGTCACGTGTCTACAGCGGTTGCTAGGTGTGACT
GCTCCTTGCCCGTCAGTGTCTCTCCGCTCGCTCGCACGCACCAGTGCTTC
CCAGCCTACCTCTCTGCCGCGAAGACAAGGCACGTCTCGAGGAATAGGAC
AGCTGCAGGGCCTTGCGGTGGAGGGAGCAGAGCCACGGCTACCCCCCCCT
CCTCCTCCATATCCGTACTACTTGTGCAGCGCTGTGCTGAGCAGCCCGAG
AAAATCACCACAACAACCGCCAGCGTCGCGCGCCAGTTGACCGAAGCAAC
TCAAAGTCGACACGCTAACCCCGTGTCCACCTAGCAGATACATGAACACT
TCTCTCGTTTGTTCAACAAGAGGAGCATGCTTACAGCAGTGTGTATACCC
CTATCCCTCTCTGTCTCCCTCTGTCTCTCTCTGTATCTCTCTCTAACTCT
GATGTGCTTGTAGTTGGTTGGGCGCAAACAACAAGGTACACACATCATCT
GTCTGCATCAATTTGGTCATCCTGCATGTTTTCTTTTAGCAACCAACGGT
CGGTGCAGCTAGAGATGTTGGTGTTGCTTTCGATTATCGTTCGGGCCATC
TCGTGGTTCGTGGTTCCGGAATTTTCTTGTATGTCATGTGTGTATATAGA
GAGGAAGGCACTACAGCTGTAGTCTGCTCTGGTCGGCGCCCTCTTGCTCT
GTCTGTATCACCATACTACATACAGCAGACGTCCGCGTTTATTACAGAGA
CACGGATTCAATTTTTTTTGCCAGGATTTTTCTTCGTACAGAGTAATCCG
GAGTATGTCATATGTGTGTATATATATATCGAGGAACGCACTACATCTCA
GAGAGGCTGCTGTAGTCAGCTCTGGGCGTCGGCGCCCTCTTGCTCTGTTT
TTTTCAAGGCTGCAAAGAAGCCGATACATCATTCCGGAGAGAATTCTCAG
CGGGTCTGCGGACTTGAATTTTCATCCTCAAGATATTTTGCGAGCATCAT
GAAGTTGATGGGGCACACCCCGTTGACAGTGACAATAATTATGAAACAGT
AGTGTTGTATTCTCACGAGTCCATCGCACTCTCTTTCAAAATGTTCACCC
TCCACAAACGAAAACAGAGATAAGGGACTTCTTTTCAGGCACCACCCACC
CACCCAGCACGTTATTTCATTGGCGTCTGGCCCCACCGCCCAGTGGGGGC
GGGGGGGCCGATCCTTAGGACTAGTATGATTTCATAGTATGATTTCAAGA
TTCGTGGGCGGTATATGGATGGTGCAGACGGGGGGTGAAGGGGGTGAGTA
GACAGAGGGCGAGGAGTCACGTCTAGTAGTACCACGGCTGGCTCGTCTGA
CATAAGCACGTTGTTATTTCCGCGACTATCTCTCTCTCAACCGTGCTGGT
TTAGGTACCTACTCCAGTACCCGATGCGTCCGGCGGATCGCCCTTCGAGC
ACGCCCCTCGCGGTCAAGGTAAGTCAACCTTCTTGTATTGCGCTTGTCGT
GGTGTTTGGCTGCTCAGTGGGTTTGAGTTTGCTCAGTGGGTTTGAGTTTC
AATTTTGAATCGTGTTAGTTTGCGGATCTGGAGGGGTACATCAAATGTGG
GAGTTGCAAAATGAATGTGCGTTGGCGTAGACAAGTCTTGAGAGGGGGGC
GTGCGTGCAGTGTGAATCCTTGCAATTGACGGATCGAGGCTCATCATACA
TCGGCTGTATGGACATTCCTTGCGTCTTGTTGTTTCTGCCTTGATGATTT
ACGTGTCACCTGTACAAATACGGAGGACTACATTCTTCATCGCGTCCAAC
TCGTGTTGAAGTGTACGCGGTATTGATATTTCAGGAGTGTCCGTTGCCGC
CGTAGTTCAAAGTTTCGATCACCTCAATCGAACAAGGAGGCGAACTCGCT
ACAACAGTAAGATAAGATGGGAGGAATTTCCAGAGCCACCAGACCAGACC
TGTTTTTTTTCTCTTCTCGTTTTGTCTCCGATACCTTCGTCCAAGTGGTC
GTGCACCTTTCAACCTTACAGGAACTGAGACCTACCACGCCACACCGTGC
ACCCCCTCGTCGCTCGTTGATTTCAGGTGAAAACAGCGAACTACCTCCTT
GAGGTGGAGCACGCCATCAAGCAGGAGGCAAGCACTTCGACAAAAACGCT
CCGGCGCAGCTCCGGCAGGCCACTCAGAAGCACACCGGCAGCAGGTCAGT
TTGTTTATTGGCCTTCTTCGTCAGCCCTTGTCGTTTTCGTTCTCGAGCGT
GGGGACGGCTGCTTTCGAAACGTCCAGCTACCGATGTTGTTAATGACAGG
TGACACGAAGGGGACATGGAGTTGGTGTGTTGTTGTCGCGGATTGATGGT
TGATGCCGCGGCTCCCTCGTTGCCATGGTTCGAAAGGCAAGCATCACTCT
CGTGCGGTGGGGGATCAGGCACGCGAGCCACAGCTCCGAAGCATCTTCAG
GCCTACGATGGGCCGCACGGCCCGGGCGATTCGGCGCCGCGCCCGCTCCG
CAGAGTGCCGAAAGTATTCGGCCAAACGCGAAAGGAAGTAAAGAAGGATG
GAAGGATTACCCGATCGATGCCTAGCGTGCCCCTCTCTCGCTCCACGAAG
TGCCGGGAAATGAAACAAGCGCGGGAAGAGGTTTGATGAATGTGATGCGG
TGCCGATACGACGAGTTCGCTTTGTAGACATGGCGGAGGGAAAAATCGAA
GAAAATTGGTGATGGGGTTTGTTGATAGAGACTTTTTGAAAAAAAAAATT
GCACGGTGCGAACGGTCTGCCGGGAGATGAAAGAAAGTGTAAGCCCGACG
CGACAAGTTCGTAGCGTCCGTGTGGGTGGTCTGCCGGCTAGGCGCGAAAG
GAAAAAAGGCATGAAAATATGCACTCGATGGCTACGTCAAGCGTAGTGAC
CCGTTGTCGCACATGGAACTAGCGAGTAAGGTGGTCGATGTGACCACGGA
CTGCACGCCACCACTGTTGAGATGCAAGAAGACGGATGTTTTGCGCGAAG
CATCCAACGAGAACAGTCCGAAAGAGAAAGAGATAAGATGGTCCCCAGAT
TTGCGAAAATGTCAACGAGCGCTCTATCCAAAAGGGATTTTCACTACTAC
TCCATCCATCATCGAAAGTAAAGCCGATTGAGATTACTATACAGACATGG
GGCATGAACGCGGACGGCCTGAGAAATGTGCGGACGGCTTTCCATAGGTC
ACATGAAAAGGGCAGGTCAGGGATAGACCTGATCAAACACTTGCATGTAC
AGGTCAGGGGATGACTCATGGACAGCCCCGGAAGCATGTATCACAGTTTG
GTTGAGCCATTTCCATTTGTTGCCGCCTGCTGGGACCTCTTGTGCTTGTC
GGCCTGCCGCCGAGGCGTGAATAGACAGACACTCAGCAAAATACCCGACT
CGAATCGAATTGAAACGATGCATGCTTGCTGTTGGTTGTTTCCAAATAGC
TCTGGGCCAACGCCGTGCATCGCTCACAGCACACTGTACTGACCGCTCAT
GGGACCATGTCCATGGGTTTCAGGTTTCTGTTTGGTTCCAGTCGCAGTCA
AGACGACCCAAGTGCTTGAGAGATTACACCCCCTCGCCGGGTTCATGGGT
ACGTATATTTACGTAAAACGTGGGATTGGCGACCTCGAGAAGAGTCGTGT
TTCAGAGCGGTCCCTGCTGAGAGAGGGGGGGACTTAATGACTTAAGGGTA
GAGGCGGAGAGGTTAGATGGATCGGAGAGCTCATGAAGAACTGACACTAT
GTTTACCTGCGATGCGATGGGGAATATGACAGGGTGCGGCCGGCGACCAA
CTTCGCCTTCGGAGTAATACGGGGCGACGAGTTCCACCTGACGCCGGTGC
ACGCCACGATGCAGATGCGTCCCAGCTTTCAGCACATTGATGAGGCCAAG
GTGGGTGGCCTGGGTCTGGTGTAGCTCGTTGTGGGCCTCACACATCTATC
TGGGAAGCGTTGCTTTTTTTGTTTCATCGTCGTTTGCCGGAGCGGAGAGA
GTTTGGTGTTTTTCGTACACAAGTGCGTTCAGAACCCCATCTTGTGGCTT
AGGTAGGCTAAGTCTCGAAGACGGTACAGGGGCAGCAAGGCGGGGGCCGA
TAACAGGCGGACGGAAGGAGGAGGGCAGAGGGACGAAACGGTTGGTCCAT
TCACCCGGAGGAAGGGTTAGAGCCTGTACATGTGCAGCTCGGCGTCGGTA
TGTTTGTGGTCTTCGATCGGTCTATCTATTTACAGCAGTCCGCAACACCA
TCGTCTTTGCCGCGCCCCGCCCTGTGCTCCTTCTCGTTCCATCTGAATCT
TTTCACTATCTTTGTTCTTCCGTGTGATCGCTAGTGGCTCCGCTTCCTCC
GTAAAATGAACTGCCTCTCTTATTCCTTGTGTGTCCGCATATCGAACCCT
ACCAGCACTCACCACAACAGTCTAAGAAGATGCGCCCAAAACTGATCTTA
TGAGTTGAATCATTTGCCTCCCCCACCCCCTCCTTCTCGTGTATCCGATG
CCACCTCTAGAAGTGCGCGTCACGGCATGTGTGGCATCTGGTACGTCATA
TAATCTAATAGCCCGATTTTCTCCATCGTTGCTCGTGCTGTTTTCCCTTC
CGAGTGCGAGTCAACATCACACCACATCACCCATCAAGAAGAAATCGGTG
CGGCTGCCCTCTTGTTCATCTTTTTTTCCTCCGCAGCAGTGCTTTGTGTG
CCGTGGGTGTCATGTACGTATCGCCTCAGTTTTATACACGTCTGCCTCAC
TCCTCGAGTTCGGTTCCGTCCCTCGGCGTGGCATCAATCTATCTCGATCA
GGCTCAGGAGATCGAGATGGACCTGGATGACCCCGACAACAGCGGCGCCA
AGGCGGCGGAGCGTCCGCAGCAGGTGTCTTTCAAAAAGAAGGAGAGCGAG
AAGGCCACCGCCGCCCGCAAGTCCTCGTACGCCTACAAGAAGTCCATCGA
GGACGCCGAGCCGTGGGTCGCCCTGGAGGTGAAGATAGCCTGGTCCCTCT
AGAAATAAACCCACATGAACGCATGAAAGTCATTCCGTCCTGCTTTGCAA
GGCCGAAACGCGGTTCCGAGTTATCGTATGCAGAACGCACGCTTCAGGTG
CAACCGTGCAAACGTACCAGTGTGTGTTTGTTTGCTTCCAATCAATGCAA
CCTGGTTTAAGTGGGACTCGAATTTTTTTTCGAAAAGAAACAAAGGTTCG
AAAAAAAAAAACAGGTATACGGCCAGAACGACGACCGGTCTCTGGACGAG
TTCTCCCGCATGTTCGTCTACGGCGACGACGACGACGACGCCGGTGTCAG
GCGCGGCACCATCACCAAGGAGTTTCCACCTTGCGAGCGCTACCTGCAGG
GGCTGGATTACATGGAGGAGTACGACGAAAACGGGGAGTCTTTTTCTGCC
GGAGGCAGGGGCCGGTCAGTTATGTCGGCGGTGGTGGTGTCCTGTGGTGC
TGGATGTGGGGTAGTCGCGGTAGTAGTGTGTAACATGTTCGCGCTTGATG
TGAATCTGCTCTGGCAGTTTCTCGCTTTCGGCGGGTTGAATGCTTGATGT
TTCGTACTCCCTCTACAGGCTGGTTCACGGTCAACGGGGTAACAAAAGTC
AACATCGATTTCTCACACCGTTTTTTCGAGTTAGACCCTCGAATTTTGCA
CAGTGATATGTTAGGTAGCTGATATTAGGCTTCCCTCTTTTTTTGTTCAC
CAGATATCCGGGGTCCCAGGGTTTTTCATGTCCAGGAGGGTCGGATTGGC
CTACTGGGACCCCAGATATCTGGTGAACAAAAATAAGAGTAAAAAGCATG
ATCATAGCGAGTTGCGTAGTGACCTAAGCTATCACTGTGCATAATTTGAG
GGTCTACCTCGAAAAAGCCGCGTGAGAAATTGCGCTGAAGTCCGGCAGAG
TGTACAAATAAATCCCTTTGATTGGGTTTAATATGAAACTGGCAATTTAA
CGCATTAATCGACCGTTATCCGTCAGTTTGATGAGTTATGCGACGAAAct
ttacCTTTGTACAGACATTCCTTGACCAACGCAGCGACGGAAAAACTTGA
GTTGCTTTTGTTGAGATTTGGAACCGGCTTCCGGGGTCCCCATCCACAAG
ACCCTGAAAGGCCGGTAAGCCTTAACAAAATAGAAGTCTCTTCGCAATTT
TCTTTTCTGAACTCGCCACACCCAAACCTATCATCCTGCCAAATATGAAG
ACCATTGGCCGTTTTCGAGGAGAGAAACAAGGGAACATATAATGTATTTT
TGTGTTTTTTGCCAAGAATCGTGCGCTTTGTATTTTGTGTGACATGTTAA
TGTATTGAACGCTGACAACGCCAACGCCCGTATCACCTTTTGCGCCATAT
CTCGACCCCACGATGATATTTTTCGATTCCGTTTTTGCCTTGTGTTCCTT
GGAATACGGGGGACACTATAACTTCAAGGATACGATGGTTGAGGATGGCA
ATACGTTTCTTTAGTTCTAAAACTGTTTCTCGGCCCCTGATTGGTCGAAA
CGTTTTTTCGCCCATAGTGCCACAGCTAGGACCTCAATAGCAAAACTACG
AATGTCACCCTCTTGATCTCTTCACGGCGGTCAGTGCAATACCAATCTTT
TTGATATTCGATTGCTTTTCCGCGTGGTACCAGCCTTATGAGAAAATTTA
CAGTGTTCACCCTGAATCAGCTTGTGCCTTTTGCTCACGCAGACGGGAGC
CGTTTGGTGGTTCTTTTGCGGCGATTACATCCCCGGCTGATTAAACGAAC
ACTCTCGCCCTTCCTTGGTTCCGTCTCATTCTGGTCCTTCCGCTGCAGAT
CTCTGGACGATAGCATCGACCTGGTCACAGCGGGAATGGGCTCGTACTCA
CCAGTCAAGATCCCCACCCCTCCAGTGCAAAACCTTGCGGGAGACGCGAA
GGTACGCTGCGTCGTCGCCGTCGCACAAGCATGTATCTCTGCTCACTCCC
TACTCCCCCCCGTCTCTCTCTCTTTAAGCTTTTCTCTTTCCCTGTCTCTG
TGTGTTTGACCGAACCGATCAGGTTGTCGGGTACCTCAAGCTAGCACACC
TGGTGCCCTTCGGCATGCTGCTGGACGTTACCAACATGTCCCCCGACGCG
GTGATGGAGGCGCTGAGCGTGGAAGGGCGGCAGCAGGGGCTGCTGCTGCG
GGGAAACTGGGCGGCTCGAGCGTCGGACGTTTGGCCGCGCGGGCCTCCGC
ACGCCGCTGACTGCTTGTCGGTCGCTCAGTGTCTGCTTCACAAGTGAGTG
TACGGGTGGCAGGTATTCGCCCCTTCTGCTGCTGCTGCTGCTCCTGCTGC
TGCTGCTGCTGCTGCTGCTGCTTCTGCCCTTTTTGTGTAGATGCATCTCT
AGCGTCTCCTCTGAACGATGACGTTCGTTTTGCCTCCGGTCTGGTCTGAA
CAGCAGTTGTCACATGGCAGGTGTGTTTTTCGCCTTGCCAGCCGGTcttc
CTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCGGCACGTCGCGCAT
CACGCATGCCCTTTCTGTTTCGCAGCCGGTCGGTTTGGCCTGCCCCTTGA
GGCCCCTTGCAACCTTGCTTTCTTGTTGTTGGTATGTATGAGAAATATAC
CAACCCGTTCCTGTTGATAACGCTTGCGTTACCTCTTTTGGGATCGCCGC
TCTCTCTCCGGGATTGCATCGCGTACAGGTATGGCGCAGTTAGCAGACCG
AACTTGCAGAGACGTTTTCCCGAGCTAGACCCCGTAACGCTGAGGGAGGT
TCTCTCCCACATCGCCGAGCTAGACACGGTGGACCGCAGGTGAGAAAGAA
AGCTCTCGCGGACACGGATAAGGCTTACACCGCCGTATCACCTAGCATCT
ACGTCGATCTCGTGGGTTGCTGTCGTTGTTTGCCGTCCGCCTCTCCAGGA
GTGAGGTTGCTCTTCGGCTAGGGTTGCTAGTACGGTGCGATGAGAGCGGG
TGTTGTTGCCTTCGTTCCCTCAGCTTCCTTGTGGGTCTCTGGTATGAGGC
AGAGACGAAGGAGGCAAGGCACTCCAAAACAAGCCTTACAAGCTTTTGCT
GCTTTGGGCTTGCAGCAAAAGGAGGACAGCTAGCTTGTTGGTTAACGAAG
GTGCTTTGAGAGCTTCGTCCCTTCTGTTTTCCTTGTTTCGTCTCTGTTTT
GTCCTAAGGCAGTTAAGCGTTTGCCCAACGCTAATATCGTTGTCTCTTTT
GCCCCCTTTCGTTAGTGCTCACGTTTTTTTCCTCAAAACACGTTTTTCTT
GGATTGTTGTCGCATGCAAACGTCTGAAATCTATGATCCGTAGGTGGGTG
CCCAAGGTCAAGGACGGAATAACCTTCGGCATGGAACACCCCGACCTCGT
CGAGCTCGAAGAGGAGAGATGGGCGTTGCAAGAGTCGAGCCTGAAGGTAA
AAGGAGGAAGCACTGCCTTCGGCCGCCAAGAACACCCCGCCGTCTAGCCG
CCCTCGTGTTTTTTTTTTTCATGCCATAAACGTAAAAATTGTTGAGTTCA
ACTGCTTCTCCCGCTCTCTCGCTCTTTTTTTTCAGCCTCCAGAAAGAAGC
GACCCGCACACCCCACGTGGGTCGTCAGTCTAAGGCTTTGGGTTGTGCGA
ATTTTTGGGAGATGCCCTTGGGTCACTTAGGCGAAGCCAGTACTTGGAGT
CCCTCGCACCCTGAAAGGATGTCGACACAGAAGGAGGACGACAGCAACGG
AATTCATTACGCGCACCAATTTCTGTGTGCATAATTCGCTCTCTCCTTCC
TTTCAAACAAGACAAGAGTTAGTAGTTGAGGTCGACGTCCTCCTTCCACG
CATGCAGTGGAGGCATTGTGTCGACGACAATCGCGCAGGGTGGGATGAAG
GTTCTCAAGAAGGTAATGTGTGTTGTCTCCCAACTCGGAGAGTAGCTGCG
CCATGTCCAAGCAGCACATCAGCCCCACCGCCTGCTGCTACCGAGTCTTG
CTGTGCAGTGCTTCTCTAGCGCCCGTGTCGACATTGACTTCTCTCCTCTG
CTCTCAGGGCGGTGATCACGGGTAGGCTCCTCGCGCCACTCGGTTACGTA
CCATTCTCGCCTCTGCTTCATTGTTGCTTTTGTCGTTGCGCTGCTGCTGT
CGATGATGATGCTGATTGCCCTGTTTTTGGTCGCCGTCGCGTGTGTGAAT
AGGAGCGTTTGGGCGAAGATGTTCTGGCCCCGCCCACTTGCCGGACGTTC
GAGCCATTCGTCGGGATATTGGCAGCCGCCACCAAGGCAGCCTCGACGGC
GTCGGCATTGGCGGCTCGAGCGCCTGCATCGCGCGCCATGCCTTCGTTCG
GCGTTCTCAGGCCGGGCGGGGGTACCGTAAAGCGAGAGGTTGCGGGGGCA
GGGGCGGGGGCGAGCGGGGGAGCGGGGTGGGGCCTCAACACAAGAAGGCC
ATCGCCGTGAAGGGGGCCACCTCGAAGGGGAAGGCAAAAGCGGATTCGGC
AGTAGTAGCGTCGGCAGCAGGAGGTGCGGGGAAACCAGGTATTGGCCCAA
AACGTCACTTTAAGCCAAAAAAGAGGCCCGCAAAGACGGCCACCGCCGCC
GGTGTTGCAGAGGAAACGATGGTTAAGCAAGAGCACGAGAGGGTTGCAGT
TGGCGGAGGCGCCGCTTCAGTTAGTGATATTGGGCTGGAGGAGTCGAAAG
ACGAAGTAGAAGCAGCAAAAGAAGAACCAGGGGGTGAGGGCGACTCCGCA
GGGCGGCCCGAGACGGGTAGATCAAAACGAGGCGCGGGTGGTGCCACCGC
AGTGGCGGCAGGCGATGGCGATGTCGTTGCAGAGAAGAGTAGTGCTGCCA
GCGCCAAGAGGCGAGGGGCGGCCTTGGACAGCGGTAGCGCAACAGGTGGC
GCCTTGCCGACGGCTAAAGAGGAACCGCGAGAAGAGAGCGGCGGTGGCGC
CAACGACGTCGAGGGCAAAGAGAAGCGCCCTGCCGCTCCTGCTCCCGCGA
CAGAGGATACCGCAATGGATGTAGAAGAGGGTGCGGTGGAGGCGGAGGTG
GTAGCCGGCGAGGGGGAGTGGCGCGTGGCGAAGGAGGCTACTAGTGGTGG
GAAAACTAGAGGCGGCGGCGGTAGCGGCGGCGGTAGCAAGGTCGACGAGC
TGGTGACGAGACCAAAGGTAAAGCCGCGAGCAACGCGCGCAAAGGCCAAG
GGGAAGTGAATTGGTCGATGTGAGCAGATTGCGCCCTGCACGTAGGTTAG
TCGCGCTGTCGCCATGGGGCTGTTGAGTTGGAAGAACACGACCTCTGAGG
TAGGCTGATATGCTAGGAAGTGGTGCAGGGCGACGGAGGGCCGTCTCTTT
GCGGGAGGAATAAGGGATTTGGTTCTTTGGAAACCAGAGTGCACGTGGGT
TCCGAGCAACAGCACAGTGGTAGTGGGGGCTTGCGCGTGAGTGCTGCTTC
CATGCCGAGCTATTGCTTGTTTTGGGAGAGATCCTCCGGGTGTGACACTC
ACTTCCCCAGGTGTGGGGGAATCAAGTGCAGCTTTCCCCCTTGAGAACAG
CTTCGTGGGACGGCACCCACGTATTTTTCTTCCTGCTTTTTCCCGACAAT
CTATTTATGGTTGGGTTGACGGGTACAGCAGTAGTGTGAATTATCGGCTC
CCTCGTCATGTGTACAAGCAAACGTGCCGGGCACCTCGCATGACGTGGGG
CGATTCGGAAGGCTCAGATTTTGACCGGGGGAACAGCATGGATGCAGGCG
TGCGGTGGTCGGAGAGGCATACGCACACAACACCGATGATACCGAGTGGC
TACTGTGCTCTCTTGGAGCATGAAAAGCGAGCACAACCTATGCATAGCAC
GCCGGATCGCTCTCCCTTGTCTCTCGTAAAAGTCGCCATTCAACGGAGGG
GTG
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Coding sequence (CDS) from alignment at P-lacustris_contig1215:2138..14090+

>mRNA_P-lacustris_contig1215.1617.1 ID=mRNA_P-lacustris_contig1215.1617.1|Name=mRNA_P-lacustris_contig1215.1617.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=2430bp|location=Sequence derived from alignment at P-lacustris_contig1215:2138..14090+ (Pleurocladia lacustris SAG_25_93)
ATGCAGATGCGTCCCAGCTTTCAGCACATTGATGAGGCCAAGATGCAGAT
GCGTCCCAGCTTTCAGCACATTGATGAGGCCAAGGCTCAGGAGATCGAGA
TGGACCTGGATGACCCCGACAACAGCGGCGCCAAGGCGGCGGAGCGTCCG
CAGCAGGTGTCTTTCAAAAAGAAGGAGAGCGAGAAGGCCACCGCCGCCCG
CAAGTCCTCGTACGCCTACAAGAAGTCCATCGAGGACGCCGAGCCGTGGG
TCGCCCTGGAGGCTCAGGAGATCGAGATGGACCTGGATGACCCCGACAAC
AGCGGCGCCAAGGCGGCGGAGCGTCCGCAGCAGGTGTCTTTCAAAAAGAA
GGAGAGCGAGAAGGCCACCGCCGCCCGCAAGTCCTCGTACGCCTACAAGA
AGTCCATCGAGGACGCCGAGCCGTGGGTCGCCCTGGAGGTATACGGCCAG
AACGACGACCGGTCTCTGGACGAGTTCTCCCGCATGTTCGTCTACGGCGA
CGACGACGACGACGCCGGTGTCAGGCGCGGCACCATCACCAAGGAGTTTC
CACCTTGCGAGCGCTACCTGCAGGGGCTGGATTACATGGAGGAGTACGAC
GAAAACGGGGAGTCTTTTTCTGCCGGAGGCAGGGGCCGGTATACGGCCAG
AACGACGACCGGTCTCTGGACGAGTTCTCCCGCATGTTCGTCTACGGCGA
CGACGACGACGACGCCGGTGTCAGGCGCGGCACCATCACCAAGGAGTTTC
CACCTTGCGAGCGCTACCTGCAGGGGCTGGATTACATGGAGGAGTACGAC
GAAAACGGGGAGTCTTTTTCTGCCGGAGGCAGGGGCCGATCTCTGGACGA
TAGCATCGACCTGGTCACAGCGGGAATGGGCTCGTACTCACCAGTCAAGA
TCCCCACCCCTCCAGTGCAAAACCTTGCGGGAGACGCGAAGATCTCTGGA
CGATAGCATCGACCTGGTCACAGCGGGAATGGGCTCGTACTCACCAGTCA
AGATCCCCACCCCTCCAGTGCAAAACCTTGCGGGAGACGCGAAGGTTGTC
GGGTACCTCAAGCTAGCACACCTGGTGCCCTTCGGCATGCTGCTGGACGT
TACCAACATGTCCCCCGACGCGGTGATGGAGGCGCTGAGCGTGGAAGGGC
GGCAGCAGGGGCTGCTGCTGCGGGGAAACTGGGCGGCTCGAGCGTCGGAC
GTTTGGCCGCGCGGGCCTCCGCACGCCGCTGACTGCTTGTCGGTCGCTCA
GTGTCTGCTTCACAAGTTGTCGGGTACCTCAAGCTAGCACACCTGGTGCC
CTTCGGCATGCTGCTGGACGTTACCAACATGTCCCCCGACGCGGTGATGG
AGGCGCTGAGCGTGGAAGGGCGGCAGCAGGGGCTGCTGCTGCGGGGAAAC
TGGGCGGCTCGAGCGTCGGACGTTTGGCCGCGCGGGCCTCCGCACGCCGC
TGACTGCTTGTCGGTCGCTCAGTGTCTGCTTCACAAGTATGGCGCAGTTA
GCAGACCGAACTTGCAGAGACGTTTTCCCGAGCTAGACCCCGTAACGCTG
AGGGAGGTTCTCTCCCACATCGCCGAGCTAGACACGGTGGACCGCAGGTA
TGGCGCAGTTAGCAGACCGAACTTGCAGAGACGTTTTCCCGAGCTAGACC
CCGTAACGCTGAGGGAGGTTCTCTCCCACATCGCCGAGCTAGACACGGTG
GACCGCAGGTGGGTGCCCAAGGTCAAGGACGGAATAACCTTCGGCATGGA
ACACCCCGACCTCGTCGAGCTCGAAGAGGAGAGATGGGCGTTGCAAGAGT
CGAGCCTGAAGGTGGGTGCCCAAGGTCAAGGACGGAATAACCTTCGGCAT
GGAACACCCCGACCTCGTCGAGCTCGAAGAGGAGAGATGGGCGTTGCAAG
AGTCGAGCCTGAAGGAGCGTTTGGGCGAAGATGTTCTGGCCCCGCCCACT
TGCCGGACGTTCGAGCCATTCGTCGGGATATTGGCAGCCGCCACCAAGGC
AGCCTCGACGGCGTCGGCATTGGCGGCTCGAGCGCCTGCATCGCGCGCCA
TGCCTTCGTTCGGCGTTCTCAGGCCGGGCGGGGGTACCGTAAAGCGAGAG
GTTGCGGGGGCAGGGGCGGGGGCGAGCGGGGGAGCGGGGTGGGGCCTCAA
CACAAGAAGGCCATCGCCGTGAGAGCGTTTGGGCGAAGATGTTCTGGCCC
CGCCCACTTGCCGGACGTTCGAGCCATTCGTCGGGATATTGGCAGCCGCC
ACCAAGGCAGCCTCGACGGCGTCGGCATTGGCGGCTCGAGCGCCTGCATC
GCGCGCCATGCCTTCGTTCGGCGTTCTCAGGCCGGGCGGGGGTACCGTAA
AGCGAGAGGTTGCGGGGGCAGGGGCGGGGGCGAGCGGGGGAGCGGGGTGG
GGCCTCAACACAAGAAGGCCATCGCCGTGA
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