mRNA_P-lacustris_contig1116.950.1 (mRNA) Pleurocladia lacustris SAG_25_93
|
Overview
Homology
BLAST of mRNA_P-lacustris_contig1116.950.1 vs. uniprot
Match: D7G5S2_ECTSI (Transmembrane protein, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5S2_ECTSI) HSP 1 Score: 336 bits (862), Expect = 5.110e-114 Identity = 174/218 (79.82%), Postives = 189/218 (86.70%), Query Frame = 1
Query: 1 LVGAAFLRLILSAPRPFMYDQRLRPLADRYETSHGLPSLETHMATVVAGWWAESGGGTGTGSIDSGRDEGVQLLVRLLAVGYICFVGFTSRVYACSRFVHQVTLSAITGSVGLAWGWRLSTHLDGVGLMLRHHVRGAVVVVIIALGVVAYHVENNDSQLMGIKKQEYLRVLSNIVMESQQAQSATIEGMEKTE-AEGGERIPRDGAPWDGRMVSSRHR 651
+ GAA LRL+LSAPRPFMYDQRLRPL DRYETSHGLPSLETHMATVVAGWWAESGG G+ S DSG D+GVQ LVRLLA+GYI FVGFT RVYACSRFVHQV LS +TG+VGLAWGWRLSTHLDG+ L +RHHVRG VVVVIIALG+VAY VENNDSQLMGI+K EYLRVLSNIV ESQQAQSAT+ G E + AEGGE + DGAPWDGR VSS+ R
Sbjct: 30 MAGAALLRLVLSAPRPFMYDQRLRPLTDRYETSHGLPSLETHMATVVAGWWAESGGSNGS-STDSGGDDGVQPLVRLLALGYIAFVGFT-RVYACSRFVHQVALSIVTGAVGLAWGWRLSTHLDGLALTMRHHVRGTVVVVIIALGMVAYQVENNDSQLMGIRKHEYLRVLSNIVKESQQAQSATVGGAESEDGAEGGEWLLHDGAPWDGRAVSSKSR 245
BLAST of mRNA_P-lacustris_contig1116.950.1 vs. uniprot
Match: A0A7S3GX49_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GX49_9STRA) HSP 1 Score: 86.7 bits (213), Expect = 6.570e-17 Identity = 69/196 (35.20%), Postives = 106/196 (54.08%), Query Frame = 1
Query: 22 RLILSAPRPFMYDQRLRPLADRYETSHGLPSLETHMATVVAGWWAESGGGTGTGSIDSGRDEGVQLLVRLLAVGYICFVGFTSRVYACSRFVHQVTLSAITGSVGLAWGW----RLSTHLDGVGLMLRHHVRGAVVVVIIALGVV---AYHVENNDSQLMGIKKQEYLRVLSNIVMESQQAQSATIEGMEKTEAEG 588
R ++ A RP YD RL+PL D S+G PSLE++M+ V+ G S + + LL V ++ +GF SRVY+ SRF HQ+ S + G VGL R++ H + HH G V+VI+ LGV+ A ++ENN+S+L I ++E++RV+SNI+ S+T++ + T+ EG
Sbjct: 3 RCLIEAKRPVEYDIRLQPLTDTRADSYGFPSLESYMSVVIMGHLFLS-------------FKNIWLLPLGAIVVFV--IGF-SRVYSRSRFPHQIVGSWLAGFVGLLVSMHCCERMNIH------KMSHHQHGVCVMVIV-LGVLCNFALNLENNESRLAQIPREEFIRVMSNIISGGDNNISSTVD-VSTTDEEG 174
BLAST of mRNA_P-lacustris_contig1116.950.1 vs. uniprot
Match: A0A8K1CBM6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CBM6_PYTOL) HSP 1 Score: 67.4 bits (163), Expect = 1.200e-9 Identity = 45/175 (25.71%), Postives = 87/175 (49.71%), Query Frame = 1
Query: 1 LVGAAFLRLILSAPRPFMYDQRLRPLADRYETSHGLPSLETHMATVVAGWWAESGGGTGTGSIDSGRDEGVQLLVRLLAVGYICFVGFTSRVYACSRFVHQVTLSAITGSVGLAWGWRLSTHLDGVGLMLRHHVRGAVVVVIIALGVVAYHVENNDSQLMGIKKQEYLRVLSNIV 525
L+ L+L+ PRP +D + + ++G P +++HM+ VV I++ + RL+ V Y ++ FT R+ SRF+ Q+ S +TG GL G + L ++ + ++++ + V+ VENNDS+++G+ +Q+++ VL+NI+
Sbjct: 108 LLAVLLLQLLAQVPRPVDFDSSMLIPSCADPDTYGFPCVDSHMSIVVL-----------LPVIENTQSR----FARLMFVAYTVYLAFT-RLCLGSRFLSQIVGSWLTGFTGLVAGNHGHVVVKAYKLSRGYNTAAIIALIVLLMFVLGQWVENNDSRIVGVPRQDFIEVLTNIL 266
BLAST of mRNA_P-lacustris_contig1116.950.1 vs. uniprot
Match: G4YHZ8_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YHZ8_PHYSP) HSP 1 Score: 61.2 bits (147), Expect = 1.180e-7 Identity = 50/178 (28.09%), Postives = 85/178 (47.75%), Query Frame = 1
Query: 1 LVGAAFLRLILSAPRPFMYDQRLRPLADRY---ETSHGLPSLETHMATVVAGWWAESGGGTGTGSIDSGRDEGVQLLVRLLAVGYICFVGFTSRVYACSRFVHQVTLSAITGSVGLAWGWRLSTHLDGVGLMLRHHVRGAVVVVIIALGVVAYHVENNDSQLMGIKKQEYLRVLSNIV 525
L+ L+ + +PRP + L L DR E + G P ++ HMA VV +I + VQLL L+ + YI ++ +RF+ QV S + G G+ G + L +++ V ++++A+ V+ +ENN+S LMGI KQ+++ V +NI+
Sbjct: 86 LLAVVTLQYLAQSPRPIDLYRPLWQLQDRRCVDEDTRGFPCVDCHMAVVVL-----------LPAILHTQSAVVQLLFVLIVL-YIA----ACKLLLATRFISQVLGSWLMGFTGILIGNHGHVVVKSYKLSRGYNIAAIVALLVLAMLVLGMWIENNESSLMGIPKQDFIEVFTNIL 247
BLAST of mRNA_P-lacustris_contig1116.950.1 vs. uniprot
Match: A0A6G0KTH7_9STRA (Uncharacterized protein n=2 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0KTH7_9STRA) HSP 1 Score: 61.2 bits (147), Expect = 1.490e-7 Identity = 47/178 (26.40%), Postives = 84/178 (47.19%), Query Frame = 1
Query: 1 LVGAAFLRLILSAPRPFMYDQRLRPLADRY---ETSHGLPSLETHMATVVAGWWAESGGGTGTGSIDSGRDEGVQLLVRLLAVGYICFVGFTSRVYACSRFVHQVTLSAITGSVGLAWGWRLSTHLDGVGLMLRHHVRGAVVVVIIALGVVAYHVENNDSQLMGIKKQEYLRVLSNIV 525
L+ L+ + +PRP + L L DR + + G P ++ HMA VV + ++V+LL V + ++ ++ +RF+ QV S + G GL G + L ++V V ++++A+ V+ +ENN+S LMGI KQ+++ V +NI+
Sbjct: 86 LLAVVTLQYLAESPRPIDLYRSLWYLQDRRCIDQDTGGFPCVDCHMAVVV---------------LLPAILRTQSVVVQLLFVSIVLYIA-ACKLLLATRFISQVLGSWLMGFTGLLLGNHGHVVVTSYNLSRGYNVAAIVALLVLAMLVLGMWIENNESSLMGIPKQDFIEVFTNIL 247
BLAST of mRNA_P-lacustris_contig1116.950.1 vs. uniprot
Match: A0A6A3K379_9STRA (Uncharacterized protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3K379_9STRA) HSP 1 Score: 60.5 bits (145), Expect = 1.770e-7 Identity = 45/172 (26.16%), Postives = 83/172 (48.26%), Query Frame = 1
Query: 19 LRLILSAPRPFMYDQRLRPLADRY---ETSHGLPSLETHMATVVAGWWAESGGGTGTGSIDSGRDEGVQLLVRLLAVGYICFVGFTSRVYACSRFVHQVTLSAITGSVGLAWGWRLSTHLDGVGLMLRHHVRGAVVVVIIALGVVAYHVENNDSQLMGIKKQEYLRVLSNIV 525
L+ + +PRP + L L DR + + G P ++ HMA VV + ++V+LL V + ++ ++ +RF+ QV S + G G+ G + L ++V V ++++A+ V+ +ENN+S LMGI KQ++++V +NI+
Sbjct: 23 LQYLAESPRPIDLYRSLWHLQDRRCIDQNTGGFPCVDCHMAVVV---------------LLPAILHTQSVVVQLLFVSMVLYIA-ACKLLLATRFISQVLGSWLMGFTGILMGNHGHVVITSYKLSRGYNVAAIVALLVLAMLVLGMWIENNESSLMGIPKQDFIQVFTNIL 178
BLAST of mRNA_P-lacustris_contig1116.950.1 vs. uniprot
Match: A0A225WPG3_9STRA (Transmembrane protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WPG3_9STRA) HSP 1 Score: 60.8 bits (146), Expect = 2.040e-7 Identity = 48/178 (26.97%), Postives = 82/178 (46.07%), Query Frame = 1
Query: 1 LVGAAFLRLILSAPRPFMYDQRLRPLADRY---ETSHGLPSLETHMATVVAGWWAESGGGTGTGSIDSGRDEGVQLLVRLLAVGYICFVGFTSRVYACSRFVHQVTLSAITGSVGLAWGWRLSTHLDGVGLMLRHHVRGAVVVVIIALGVVAYHVENNDSQLMGIKKQEYLRVLSNIV 525
L+ FL+ + +PRP L L DR E + G P ++ HMA VV + ++V+L+ V + ++ + A +RFV QV S + G G+ G L + + G + ++++ + V+ +ENNDS LMGI KQ+++ V +NI+
Sbjct: 87 LLAVLFLQYVTESPRPIDLYHPLWQLQDRRCIDEDTMGFPCVDCHMAVVV---------------LLPAMLHTQSVVVQLIFVVMVLYIALCKLLLA-TRFVSQVLGSWLMGFAGILIGNHGHVVAKSYKLSRGYTIGGIISLLVLLMIVLGMWIENNDSSLMGIPKQDFVEVFTNIL 248
BLAST of mRNA_P-lacustris_contig1116.950.1 vs. uniprot
Match: F0WU39_9STRA (Transmembrane protein putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WU39_9STRA) HSP 1 Score: 56.2 bits (134), Expect = 7.210e-6 Identity = 42/174 (24.14%), Postives = 76/174 (43.68%), Query Frame = 1
Query: 4 VGAAFLRLILSAPRPFMYDQRLRPLADRYETSHGLPSLETHMATVVAGWWAESGGGTGTGSIDSGRDEGVQLLVRLLAVGYICFVGFTSRVYACSRFVHQVTLSAITGSVGLAWGWRLSTHLDGVGLMLRHHVRGAVVVVIIALGVVAYHVENNDSQLMGIKKQEYLRVLSNIV 525
+GA + +LS RP + + G P ++THM+ VV + + +RL A+ + +V T RV SRFV Q+ L L+ + H G V ++ +G++++H+ENN S+++GI+K+E+ +V +I+
Sbjct: 103 IGALLGQYMLSCRRPIDFVNTFYDTKRTDPDTFGFPCVDTHMSVVV---------------LFPIITTASNIPLRLCALLLLLYVPVT-RVMIASRFVSQIIGXXXXXXXXXXXXXMLQLRLNSAPISSTLHQVGLVALLFFCVGILSFHIENNQSRILGIQKREFKQVFKDIL 260
BLAST of mRNA_P-lacustris_contig1116.950.1 vs. uniprot
Match: K3WB16_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WB16_GLOUD) HSP 1 Score: 55.8 bits (133), Expect = 1.070e-5 Identity = 54/191 (28.27%), Postives = 88/191 (46.07%), Query Frame = 1
Query: 1 LVGAAFLRLILSAPRPFMYDQRLRPLADRYETSHGLPSLETHMATVVAGWWAESGGGTGTGSIDSGRDEGVQLLVRLLAVGYICFVGFTSRVYACSRFVHQVTLSAITGSVG---------------LAWGWRLSTHLDGVGLMLRHHVRGAVVVVIIALG-VVAYHVENNDSQLMGIKKQEYLRVLSNIV 525
L+G L+ + RP D L ++G P +++HM+ VV I VQ + LL + ++G T +++ +RFV QV S +TG G L+ G++ + L LR GA+VV+I+ L VV +ENN+S L+G+ KQ+Y+ V++NI+
Sbjct: 72 LLGVLLLQYVAQIGRPIDLDSSLYEHQYTDPDTNGFPCVDSHMSVVVL-----------LPVIMHVESPVVQSSLALL----LLYLGMT-KLFVATRFVSQVVGSWLTGLAGILVGNHGHAVLKTYKLSRGYKYEEKAQKLELSLR---TGAIVVLIVFLMYVVGTWIENNESCLLGVPKQDYVDVITNIL 243
BLAST of mRNA_P-lacustris_contig1116.950.1 vs. uniprot
Match: A0A2P4X8C0_9STRA (Transmembrane protein n=2 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X8C0_9STRA) HSP 1 Score: 55.8 bits (133), Expect = 1.100e-5 Identity = 43/178 (24.16%), Postives = 81/178 (45.51%), Query Frame = 1
Query: 1 LVGAAFLRLILSAPRPFMYDQRLRPLADRY---ETSHGLPSLETHMATVVAGWWAESGGGTGTGSIDSGRDEGVQLLVRLLAVGYICFVGFTSRVYACSRFVHQVTLSAITGSVGLAWGWRLSTHLDGVGLMLRHHVRGAVVVVIIALGVVAYHVENNDSQLMGIKKQEYLRVLSNIV 525
++ L+ + +PRP L D+ E + G P ++ HMA VV + ++++L+ VG + ++ + A +RF+ QV S + G G+ G + L + + V +++ ++ V+ +ENNDS LMGI KQ+++ V +NI+
Sbjct: 97 MLAVVVLQYLAESPRPIDLYHPLWQWQDQRCIDEDTGGFPCVDCHMAIVV---------------LLPAMLHTQSVVIQLIFVGIVVYIALCKLLLA-TRFISQVLGSWLMGFAGILIGNHGHVVVKSYKLTRGYTIGAIVALLVFSMIVLGMWIENNDSSLMGIPKQDFMEVFTNIL 258 The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig1116.950.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-lacustris_contig1116.950.1 >prot_P-lacustris_contig1116.950.1 ID=prot_P-lacustris_contig1116.950.1|Name=mRNA_P-lacustris_contig1116.950.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=218bp LVGAAFLRLILSAPRPFMYDQRLRPLADRYETSHGLPSLETHMATVVAGWback to top mRNA from alignment at P-lacustris_contig1116:6423..8212- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-lacustris_contig1116.950.1 ID=mRNA_P-lacustris_contig1116.950.1|Name=mRNA_P-lacustris_contig1116.950.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=1790bp|location=Sequence derived from alignment at P-lacustris_contig1116:6423..8212- (Pleurocladia lacustris SAG_25_93)back to top Coding sequence (CDS) from alignment at P-lacustris_contig1116:6423..8212- >mRNA_P-lacustris_contig1116.950.1 ID=mRNA_P-lacustris_contig1116.950.1|Name=mRNA_P-lacustris_contig1116.950.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=1308bp|location=Sequence derived from alignment at P-lacustris_contig1116:6423..8212- (Pleurocladia lacustris SAG_25_93)back to top |