Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 232 |
| Cds size | 231 |
| Stop | 0 |
| Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815304.894112-CDS-P-lacustris_contig1036:71626..71746 | 1622815304.894112-CDS-P-lacustris_contig1036:71626..71746 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig1036 71627..71746 + |
| 1693493464.5264463-CDS-P-lacustris_contig1036:71626..71746 | 1693493464.5264463-CDS-P-lacustris_contig1036:71626..71746 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig1036 71627..71746 + |
| 1622815304.9029214-CDS-P-lacustris_contig1036:72251..72362 | 1622815304.9029214-CDS-P-lacustris_contig1036:72251..72362 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig1036 72252..72362 + |
| 1693493464.5349488-CDS-P-lacustris_contig1036:72251..72362 | 1693493464.5349488-CDS-P-lacustris_contig1036:72251..72362 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig1036 72252..72362 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-lacustris_contig1036.381.1 >prot_P-lacustris_contig1036.381.1 ID=prot_P-lacustris_contig1036.381.1|Name=mRNA_P-lacustris_contig1036.381.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=77bp
GRGRWASPRTRKWRMRNLRLQMAGVPPRREEERLLQHQSMVKQRLDEGLS
GGEAFKFLLRLVATHFDYEDRGDALTK back to topmRNA from alignment at P-lacustris_contig1036:71627..72363+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-lacustris_contig1036.381.1 ID=mRNA_P-lacustris_contig1036.381.1|Name=mRNA_P-lacustris_contig1036.381.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=737bp|location=Sequence derived from alignment at P-lacustris_contig1036:71627..72363+ (Pleurocladia lacustris SAG_25_93)
GGCCGAGGGAGGTGGGCCAGCCCTCGGACTCGGAAGTGGAGGATGCGAAA
TCTTCGGCTTCAGATGGCGGGAGTGCCTCCGCGTCGGGAGGAGGAGAGGC
TTCTCCAACATCAATCCATGGTGAGACCATGTCTAGATTGATGAGCTCTC
TTCGTTCCCCCCGTCCCAAGCCTCGTAGGGTTCCCCCTTTGTCTTCCGTG
CAGACTCCAACCGTGGTTGGATGTCGCGCAACAGTGTGTCGGTAGTACAC
AATGGTCTCCCCTTTCGTCCCAGCTGGCTCGCACGCGTCAGGCTGAGTTG
GAAGAGGCAGCGAAGTTGGTCGAGATAGCTCGCGTTCGAGATATCGCCAC
CAACTACACGAAAACCAAGTTGCGTGAGATTAAATCCACCCCGCATGCCA
TGGCAGCCAAGCCTCAAAAACGCGGTGCCACAGCTCCTAGACTCCATCTC
TGCCGCGGTCCTCGACATTCTGCAACAAGCGGACCCGTTTATCGTGTTCG
AAGACTCGGATAGTTGGTGTCGAGGATGGGAAAATCCTTTAAGGAAGGCG
ATGATTTCAGCGGTTGTCACAGAGAAAGACACGACCGGAGAACTGATTTC
CTCAATTAACGACATGTTCACGCAGGTGAAGCAGAGGCTGGATGAGGGCT
TGAGCGGTGGCGAAGCCTTCAAGTTCCTCCTGCGGCTGGTAGCGACACAC
TTCGACTATGAGGATCGAGGCGATGCCTTGACAAAGT back to topCoding sequence (CDS) from alignment at P-lacustris_contig1036:71627..72363+ >mRNA_P-lacustris_contig1036.381.1 ID=mRNA_P-lacustris_contig1036.381.1|Name=mRNA_P-lacustris_contig1036.381.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=462bp|location=Sequence derived from alignment at P-lacustris_contig1036:71627..72363+ (Pleurocladia lacustris SAG_25_93)
GGCCGAGGGAGGTGGGCCAGCCCTCGGACTCGGAAGTGGAGGATGCGAAA
TCTTCGGCTTCAGATGGCGGGAGTGCCTCCGCGTCGGGAGGAGGAGAGGC
TTCTCCAACATCAATCCATGGGCCGAGGGAGGTGGGCCAGCCCTCGGACT
CGGAAGTGGAGGATGCGAAATCTTCGGCTTCAGATGGCGGGAGTGCCTCC
GCGTCGGGAGGAGGAGAGGCTTCTCCAACATCAATCCATGGTGAAGCAGA
GGCTGGATGAGGGCTTGAGCGGTGGCGAAGCCTTCAAGTTCCTCCTGCGG
CTGGTAGCGACACACTTCGACTATGAGGATCGAGGCGATGCCTTGACAAA
GGTGAAGCAGAGGCTGGATGAGGGCTTGAGCGGTGGCGAAGCCTTCAAGT
TCCTCCTGCGGCTGGTAGCGACACACTTCGACTATGAGGATCGAGGCGAT
GCCTTGACAAAG back to top
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