mRNA_P-lacustris_contig1025.319.1 (mRNA) Pleurocladia lacustris SAG_25_93
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_P-lacustris_contig1025.319.1 vs. uniprot
Match: D8LK99_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK99_ECTSI) HSP 1 Score: 615 bits (1586), Expect = 3.090e-213 Identity = 344/495 (69.49%), Postives = 359/495 (72.53%), Query Frame = 1 Query: 73 MASKGT-----PTAAPLLEDFIGFLNEAWTAYHATAEARRRLLEAGFEELDESQPTHEVKPGGKYFFTRNMSAIAAFAVGGAYTDGDGFVIVGAHTDSPCPKLKPVSKAAKAGFCSWRRSRTGEACGTRGSTATWGWR-AGLSSSA----GRGSYSHDLVKINRPVLRVPTLAIHLTKADERTSFSPNLQDNFFPVLATEVKAKLAASASETGGAGDERGTADGRGEEGAGAGRNDDMHHPLLVEMLAKELGCEPGDVKDFELQLCDTQPSCIGGACSEFVFSGRLDNLCSSWQARAALDRRTSIRALIDGCEGDGLASCKGVRSVFLFDHEEVGSTSCHGAAGTLLPDCMKRRDVGLATSPSSVAMEAVVRKSFLVSADMAHALHPNYSERHDPALGPKMHGGMVLKHNANQRYATNAVTAFFFRELGARAGLPTQEFAVKSDSGCGSTIGPTLSALSGIRTVDVGSPQLSMHSIREMMGADDAVLGYRHLKAV 1527
MASK A LLEDF+ FLNEAWTAYHATAEARRRLL AGFEELDESQ TH+VKP VSKA+KAGF G G TW R G++ A G G YSHDLVKINRPVLR+PTLAIHLTKADER SFSPNLQ NFFPVLATEVKAKL A GGA + A G GE G D+ HH LLVEM+A+ELGC+P DVKDFELQ DTQPSC+GGACSEFVFSGRLDN CSSWQ SIRALIDGCEGDGLASCKGVRSVFLFDHEEVGSTSCHGAAGTLLPDCMKR GLA SPS MEAVVRKSFLVSADMAHALHPNY +RHDPALGPK+H GMVLKHNANQRYATNAVTAFFFRELGARAGLPTQEFAVKSDS CGSTIGPTLSALSGIRTVDVGSPQLSMHSIREMMGADDAV GYRH+K V
Sbjct: 1 MASKNNNPDNAAATASLLEDFVDFLNEAWTAYHATAEARRRLLAAGFEELDESQATHDVKP--------------------------------------------VSKASKAGFLQLATQPYGG-----GLWHTWFDRDLGVAGRAIVKRGEGKYSHDLVKINRPVLRIPTLAIHLTKADERKSFSPNLQSNFFPVLATEVKAKLTA-----GGASSK--AAAGEGESPGKEGGGDERHHALLVEMVAEELGCQPEDVKDFELQFWDTQPSCLGGACSEFVFSGRLDNFCSSWQ---------SIRALIDGCEGDGLASCKGVRSVFLFDHEEVGSTSCHGAAGTLLPDCMKRIAKGLAASPSDFVMEAVVRKSFLVSADMAHALHPNYQDRHDPALGPKIHSGMVLKHNANQRYATNAVTAFFFRELGARAGLPTQEFAVKSDSACGSTIGPTLSALSGIRTVDVGSPQLSMHSIREMMGADDAVFGYRHIKGV 430
BLAST of mRNA_P-lacustris_contig1025.319.1 vs. uniprot
Match: A0A6H5KHI3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHI3_9PHAE) HSP 1 Score: 556 bits (1434), Expect = 1.180e-191 Identity = 288/358 (80.45%), Postives = 299/358 (83.52%), Query Frame = 1 Query: 520 VKINRPVLRVPTLAIHLTKADERTSFSPNLQDNFFPVLATEVKAKLAASASETGGAGDERGTADGRGEEGAGAGRNDDMHHPLLVEMLAKELGCEPGDVKDFELQLCDTQPSCIGGACSEFVFSGRLDNLCSSWQARAALDRRTSIRALIDGCEGDGLASCKGVRSVFLFDHEEVGSTSCHGAAGTLLPDCMKRRDVGLATSPSSVAMEAVVRKSFLVSADMAHALHPNYSERHDPALGPKMHGGMVLKHNANQRYATNAVTAFFFRELGARAGLPTQEFAVKSDSGCGSTIGPTLSALSGIRTVDVGSPQLSMHSIREMMGADDAVLGYRHLKAVLEKFFEIDGQLAVDASPAAVVA 1593
VKINRPVLR+PTLAIHLTKADER SFSPNLQ NFFPVLATEVKAKLAA + + D+ HH LLVE++A+ELGC+P DVKDFELQLCDTQPSCIGG CSEFV SGRLDNLCSSWQ SIRALIDGCEGDGLASCKGVRSVFLFDHEEVGSTSC GAAGTLLPDCMKR GLA SPS MEAVVRKSFLVSADMAHALHPNY +RHDPALGPK+H GMVLKHN NQRYATNAVTAFFFRELGARAGLPTQEFAVKSDS CGSTIGPTLSALSGIRTVDVGSPQLSMHSIREMMGADDAVLGYRH+KAVLE FFEIDGQL VD P AVVA
Sbjct: 23 VKINRPVLRIPTLAIHLTKADERKSFSPNLQSNFFPVLATEVKAKLAAGGASSX-------XXXXXXXXXXKXXXXDERHHALLVELVAEELGCQPEDVKDFELQLCDTQPSCIGGTCSEFVLSGRLDNLCSSWQ---------SIRALIDGCEGDGLASCKGVRSVFLFDHEEVGSTSCQGAAGTLLPDCMKRIAKGLAASPSDFVMEAVVRKSFLVSADMAHALHPNYQDRHDPALGPKIHSGMVLKHNTNQRYATNAVTAFFFRELGARAGLPTQEFAVKSDSACGSTIGPTLSALSGIRTVDVGSPQLSMHSIREMMGADDAVLGYRHIKAVLENFFEIDGQLVVDGCPPAVVA 364
BLAST of mRNA_P-lacustris_contig1025.319.1 vs. uniprot
Match: A0A7S1XZN9_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XZN9_9STRA) HSP 1 Score: 472 bits (1214), Expect = 2.000e-156 Identity = 270/494 (54.66%), Postives = 324/494 (65.59%), Query Frame = 1 Query: 115 DFIGFLNEAWTAYHATAEARRRLLEAGFEELDESQPTHEVKPGGKYFFTRNMSAIAAFAVGGAYTDGDGFVIVGAHTDSPCPKLKPVSKAAKAGFCSWRRSRTGEACGTRGST-ATWGWR----AGLSSSAGR-GSYSHDLVKINRPVLRVPTLAIHLTKADERTSFSPNLQDNFFPVLATEVKAKLAASASETGGAGDERGTADGRGEEGAGAGRNDDMHHPLLVEMLAKELGCEPGDVKDFELQLCDTQPSCIGGACSEFVFSGRLDNLCSSWQARAALDRRTSIRALIDGCEGDGLASCKGVRSVFLFDHEEVGSTSCHGAAGTLLPDCMKRRDVGL-ATSPSSV-AMEAVVRKSFLVSADMAHALHPNYSERHDPALGPKMHGGMVLKHNANQRYATNAVTAFFFRELGARAGLPTQEFAVKSDSGCGSTIGPTLSALSGIRTVDVGSPQLSMHSIREMMGADDAVLGYRHLKAVLEKFFEIDGQLAVDA 1572
D + +LNEAWT +HA + L E GF ELDE++ ++ GKYFFTRNMS++ AF VGGA G G +VGAHTDSPCPKLKPVS+ + G C S G CG G TW R AG G G H LVKI RP+LR TLAIHL+K +ER++F PNLQ +F+P+LAT +K A +G GAG G++ H PLL+ +LA ELGC D+ DF+LQLCDTQPS IGGA +EF+FSGRLDNLCSS+Q +RAL+D D L + KGVR V LFDHEEVGS+S GA G +LP+ + R G+ SP + V RKSF VSADMAHA HPNY ERHDP L P +H G+V+KHNANQRYAT+AVTA FRE A+ G+P QEFAV+SDSGCGSTIGP ++L+GIRTVD+GSPQLSMHSIRE+MG DDA GY +KA E F EID L VDA
Sbjct: 9 DMVAYLNEAWTCFHAVEAGKALLFEHGFVELDEAESWGSLEKNGKYFFTRNMSSLVAFTVGGAADPGCGVTLVGAHTDSPCPKLKPVSRCTR-GAC----SMVG-VCGYGGGQWHTWFDRDLTVAGRVLIRGADGGLVHRLVKIARPILRTSTLAIHLSKGNERSAFEPNLQAHFYPILATAIKEAALLKA---------------KGGAGAG-GKSKPSHSPLLLGLLADELGCAETDILDFDLQLCDTQPSAIGGAANEFIFSGRLDNLCSSYQG---------LRALVDTL--DSLGTDKGVRLVALFDHEEVGSSSSTGAGGPILPNSIARITQGMYGDSPLCADVLPRVYRKSFCVSADMAHAQHPNYPERHDPNLNPSIHSGVVIKHNANQRYATSAVTATLFRECCAKGGVPVQEFAVRSDSGCGSTIGPITASLTGIRTVDIGSPQLSMHSIREIMGTDDAYYGYAAIKACFENFNEIDEGLTVDA 469
BLAST of mRNA_P-lacustris_contig1025.319.1 vs. uniprot
Match: A0A7R9U6Z2_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U6Z2_9STRA) HSP 1 Score: 465 bits (1196), Expect = 2.180e-153 Identity = 264/502 (52.59%), Postives = 323/502 (64.34%), Query Frame = 1 Query: 112 EDFIGFLNEAWTAYHATAEARRRLLEAGFEELDESQPTHEVKPGGKYFFTRNMSAIAAFAVGGAYTDGDGFVIVGAHTDSPCPKLKPVSKAAKAGFCSWRRSRTGEACGTRGSTATWGWR----AGLSSSAGRGSYSHDLVKINRPVLRVPTLAIHLTKADERTSFSPNLQDNFFPVLATEVK--AKLAASASETGGAGDERGTADGRGEEGAGAGRNDDMHHPLLVEMLAKELGCEPG-DVKDFELQLCDTQPSCIGGACSEFVFSGRLDNLCSSWQARAALDRRTSIRALIDGCEGDGLASCKGVRSVFLFDHEEVGSTSCHGAAGTLLPDCMKRRDVGLATSPSSVAMEA---VVRKSFLVSADMAHALHPNYSERHDPALGPKMHGGMVLKHNANQRYATNAVTAFFFRELGARAGLPTQEFAVKSDSGCGSTIGPTLSALSGIRTVDVGSPQLSMHSIREMMGADDAVLGYRHLKAVLEKFFEIDGQLAVDASPAAV 1587
ED + FLN++WTA+HA A A+ LL F ELDE +P +++P GKYFFTRNMS++ AF VGG T G ++GAHTDSPCPKLKP+SK ++ G C S A G TW R AG + H LVKI RP+LR TLAIHLTK DER SFSPNLQ + +P+LAT +K A + S++ D H PLL+ +L + LGCE D+ DFELQLCDTQPS IGGA +EF+FSGRLDNLCSS+Q S+RAL+D D L VR++ LFD+EEVGS+S GA G +LPD +KR GL + + V+RKSF VSADMAHA HPNY ERHDPAL PK+HGG+VLKHN NQRYA++AVT+ FR+ + LP QEFA +SD+GCGSTIGP +AL+G+RTVD+GSPQLSMHS+REMMGADDA GYR LKA F +D L VD +P V
Sbjct: 5 EDLVAFLNDSWTAFHAVAAAKSLLLAHDFVELDEMEPWGQLQPQGKYFFTRNMSSLVAFCVGGRATSDSGVALIGAHTDSPCPKLKPISKCSR-GAC----SMVAVAGYGGGLWHTWFDRDLTVAGRALVREGPRIVHRLVKIERPILRTSTLAIHLTKGDERGSFSPNLQQHLYPMLATAIKESAMMGKKKSDS----------------------KDAKHSPLLLHILMEHLGCETEQDILDFELQLCDTQPSMIGGAANEFIFSGRLDNLCSSYQ---------SLRALVDSL--DTLPEEPNVRAIALFDNEEVGSSSIAGAQGPILPDAIKRIVHGLHGGDQGLPADLLPRVIRKSFCVSADMAHAHHPNYPERHDPALAPKIHGGIVLKHNPNQRYASSAVTSTIFRQCCLKEDLPFQEFATRSDTGCGSTIGPITAALTGMRTVDIGSPQLSMHSVREMMGADDAEHGYRALKAFFNNFSSVDRTLKVDKAPNGV 468
BLAST of mRNA_P-lacustris_contig1025.319.1 vs. uniprot
Match: A4S7N7_OSTLU (Uncharacterized protein n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) TaxID=436017 RepID=A4S7N7_OSTLU) HSP 1 Score: 451 bits (1160), Expect = 4.090e-148 Identity = 259/503 (51.49%), Postives = 317/503 (63.02%), Query Frame = 1 Query: 88 TPTAAPLLEDFIGFLNEAWTAYHATAEARRRLLEAGFEELDESQPTHEVKPGGKYFFTRNMSAIAAFAVGGAYTDGDGFVIVGAHTDSPCPKLKPVSKAAKAGFCSWRRSRTGEACGTRGSTATWGWR----AG--LSSSAGRGSYSHDLVKINRPVLRVPTLAIHLTKADERTSFSPNLQDNFFPVLATEVKAKLAASASETGGAGDERGTA-DGRGEEGAGAGRNDDMHHPLLVEMLAKELGCEPGDVKDFELQLCDTQPSCIGGACSEFVFSGRLDNLCSSWQARAALDRRTSIRALIDGCEGDGLASCKGVRSVFLFDHEEVGSTSCHGAAGTLLPDCMKRRDVGLATSPSSVAMEAVVRKSFLVSADMAHALHPNYSERHDPALGPKMHGGMVLKHNANQRYATNAVTAFFFRELGARAGLPTQEFAVKSDSGCGSTIGPTLSALSGIRTVDVGSPQLSMHSIREMMGADDAVLGYRHLKAVLEKFFEIDGQLAVDAS 1575
T TA + +LN+AWTAYHAT L GF ELDE + T + GG+YF+TRN SA+ AFAVGG Y GDGFVIVGAHTDSPCPKLKP ++ R G G TW R AG + S+ G H LV+I+R V R+PTLAIHL + N Q + P+LAT KA+ A + GG E+ TA DG+G + HHPLL+ +LAKELGC PGD+ DF+LQLCDTQPS IGGA +EF++SGRLDNL S + TS+ AL++ + LA +GVR + FDHEEVGS S GAAG + D +KR L+ E R SF VS+DMAHALHPNY++RH+PA PKMHGG+V+KHNANQRYAT+AVTAF FRE+G RAG+P QEF V+SD+GCGSTIGP S +GIRTVDVG+ QLSMHSIRE+ GADD +HL AV F ++D L VD +
Sbjct: 3 TETARTHARGLVDYLNDAWTAYHATRATCEALARRGFVELDE-RATWSLARGGRYFYTRNASAVVAFAVGGGYEPGDGFVIVGAHTDSPCPKLKPNTRVEGGDEVRVRVQPYGG-----GLWHTWFDRDLGIAGRVVVKSSHTGEILHRLVRIDRAVCRIPTLAIHLDRNVNSEGMKVNFQQHMAPILATRAKAE--AKDDDEGG---EKTTASDGKGSS--------ERHHPLLLTLLAKELGCAPGDIVDFDLQLCDTQPSAIGGAQNEFIYSGRLDNLASCY---------TSLHALMNASTDEALADARGVRMIMHFDHEEVGSESSSGAAGAMTTDAIKRIAAALSQGSVEGLDERTRRASFCVSSDMAHALHPNYADRHEPAHAPKMHGGLVIKHNANQRYATDAVTAFMFREIGERAGVPVQEFVVRSDTGCGSTIGPIFSTRTGIRTVDVGAAQLSMHSIREVCGADDIDHAVKHLTAVYLHFIDLDRTLIVDGA 477
BLAST of mRNA_P-lacustris_contig1025.319.1 vs. uniprot
Match: A0A7I4E618_PHYPA (Uncharacterized protein n=4 Tax=Physcomitrium patens TaxID=3218 RepID=A0A7I4E618_PHYPA) HSP 1 Score: 453 bits (1165), Expect = 5.630e-148 Identity = 258/499 (51.70%), Postives = 331/499 (66.33%), Query Frame = 1 Query: 106 LLEDFIGFLNEAWTAYHATAEARRRLLEAGFEELDESQPTHEVKPGGKYFFTRNMSAIAAFAVGGAYTDGDGFVIVGAHTDSPCPKLKPVSKAAKAGFCSWRRSRTGEACGTRGSTATWGWRAGLSSSAGR-------GSYSHDLVKINRPVLRVPTLAIHLTKADERTSFSPNLQDNFFPVLATEVKAKLAASASETGGAGDERGTADGRGEEGAGA-GRNDDMHHPLLVEMLAKELGCEPGDVKDFELQLCDTQPSCIGGACSEFVFSGRLDNLCSSWQARAALDRRTSIRALIDGC-EGDGLASCKGVRSVFLFDHEEVGSTSCHGAAGTLLPDCMKRRDVGLAT-SPSSVAMEAVVRKSFLVSADMAHALHPNYSERHDPALGPKMHGGMVLKHNANQRYATNAVTAFFFRELGARAGLPTQEFAVKSDSGCGSTIGPTLSALSGIRTVDVGSPQLSMHSIREMMGADDAVLGYRHLKAVLEKFFEIDGQLAVDA 1572
++ D + FLNE+WT +HATAEA+R+LL+AGF++L+E Q V+PGG+YFFTRNMS+I AFA+G Y G+GF IV AHTDSPCPKLKPVS A+KAGF + G G TW R S AGR G+ L+K++RP++R+PTLAIHL + F PNL+ + PVLAT++KA+L SETGG + E G GA + HH LL+E+LA++L C ++ DFEL +CDTQPSC+GGA EF+FSGRLDNL SS+ A +RAL+D C + LA +R++ LFD+EEVGS S GA ++ M R L +P+ E +RKSFLVSADMAHALHPNY++RH+ PK+H G+V+K+NANQRYATN VTAF F+E+ AG+PTQ F V++D GCGSTIGP L++ GIRTVDVG PQLSMHS+REM G +D L YRH KA E F ID +L VD+
Sbjct: 106 IVTDMLNFLNESWTPFHATAEAKRQLLKAGFQQLNEEQEW-TVQPGGRYFFTRNMSSIFAFAIGQKYEAGNGFNIVAAHTDSPCPKLKPVSAASKAGFLNVGVQTYGG-----GLWHTWFDRD--LSVAGRVLLRKKNGTIVQGLIKVDRPIMRIPTLAIHLDRTVNTDGFKPNLETHLAPVLATQIKAELLGK-SETGG----------QSEGGNGAINSSKKPHHSLLLEVLAEQLNCSVEEIVDFELNVCDTQPSCVGGARKEFIFSGRLDNLASSYCA---------LRALLDTCPDSASLADESCIRAIALFDNEEVGSDSAQGAGSPVMFQAMSRITKWLTRDTPTEGIEERTIRKSFLVSADMAHALHPNYADRHEENHQPKLHEGLVIKYNANQRYATNTVTAFLFKEVAKVAGVPTQNFVVRNDMGCGSTIGPILASGIGIRTVDVGMPQLSMHSVREMCGTEDVDLSYRHFKAFYELFTTID-KLTVDS 575
BLAST of mRNA_P-lacustris_contig1025.319.1 vs. uniprot
Match: A0A7S0WT64_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0WT64_9CHLO) HSP 1 Score: 452 bits (1162), Expect = 1.800e-147 Identity = 256/522 (49.04%), Postives = 324/522 (62.07%), Query Frame = 1 Query: 103 PLLEDFIGFLNEAWTAYHATAEARRRLLEAGFEELDESQPTHEVKPGGKYFFTRNMSAIAAFAVGGAYTDGDGFVIVGAHTDSPCPKLKPVSKAAKAGFCSWRRSRTGEACGTRGSTATW-----GWRAGLSSSAGRGSY-SHDLVKINRPVLRVPTLAIHLTKADERTSFSPNLQDNFFPVLATEVKAKLAASASETGGAGDERGTADGRGEEGAGAGRNDDMHHPLLVEMLAKELGCEPGDVKDFELQLCDTQPSCIGGACSEFVFSGRLDNLCSSWQARAALDRRTSIRALIDGCEGDG-LASCKGVRSVFLFDHEEVGSTSCHGAAGTLLPDCMKRRDVGLATSPSSVAMEAVVRKSFLVSADMAHALHPNYSERHDPALGPKMHGGMVLKHNANQRYATNAVTAFFFRELGARAGLPTQEFAVKSDSGCGSTIGPTLSALSGIRTVDVGSPQLSMHSIREMMGADDAVLGYRHLKAVLEKFFEIDGQLAVDASPAAVVA*TTPISKGFYAAHVCRHS 1647
P+ +D + F+N AWT YHA EA RRL++AGF+ + E + +VKPGGKYFFTRNMS I AFAVG Y G+GF ++GAHTDSPC KLKPVSK++K+G+ G G TW G + G G H LV+I+RP+LR+P LAIHL + F PNLQ NF PVLAT KA+L A+ A + + HH LL+EM+A++LG P D+ DFEL +CD QP+ +GGA EFV +GRLDNLC S+ S++A++D C G LA GVR++ LFDHEEVGS S GA G L+ D + R L+ A+E +R SFLVSADMAHALHPNY+++HDP PKMH GMVLKHN+NQRYATN+V+A FRE+G R G+P QEF+V++D+ CGSTIGP LS+L G RTVDVG QLSMHSIREM G DD + Y+H A E F +D + VDA P A + G + C H+
Sbjct: 72 PIAQDLVNFINHAWTPYHAVEEASRRLMQAGFQHISE-KAAWDVKPGGKYFFTRNMSTICAFAVGEKYVPGNGFFMIGAHTDSPCLKLKPVSKSSKSGWLMINVETYGG-----GLWYTWFDRDLGLAGRVLVRGGEGEQIQHRLVRIDRPILRIPMLAIHLQRDIHSAGFKPNLQTNFAPVLATAAKAQLDKPAAAXXXXXXXXXXXXXXXXLKA---QEANKHHSLLLEMVAQQLGVAPADILDFELHVCDVQPATLGGATDEFVLAGRLDNLCMSY---------LSLQAMLDTCTAPGSLAEETGVRAIALFDHEEVGSESAQGAGGPLMRDTITRVASALSKGEEG-AVERAMRSSFLVSADMAHALHPNYADKHDPDHQPKMHEGMVLKHNSNQRYATNSVSAALFREVGHRRGIPCQEFSVRNDTPCGSTIGPILSSLLGCRTVDVGVAQLSMHSIREMCGVDDIGIAYKHFVAFFEDFSALDKHIDVDALPPANII-------GTISGTECHHT 567
BLAST of mRNA_P-lacustris_contig1025.319.1 vs. uniprot
Match: A0A1Y1HZQ4_KLENI (Zn-dependent aspartyl aminopeptidase n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HZQ4_KLENI) HSP 1 Score: 445 bits (1145), Expect = 2.980e-146 Identity = 251/500 (50.20%), Postives = 321/500 (64.20%), Query Frame = 1 Query: 106 LLEDFIGFLNEAWTAYHATAEARRRLLEAGFEELDESQPTHEVKPGGKYFFTRNMSAIAAFAVGGAYTDGDGFVIVGAHTDSPCPKLKPVSKAAKAGFCSWRRSRTGEACGTRGSTATWGWRAGLSSSAGR-------GSYSHDLVKINRPVLRVPTLAIHLTKADERTSFSPNLQDNFFPVLATEVKAKLAASASETGGAGDERGTADGRGEEGAGAGR---NDDMHHPLLVEMLAKELGCEPGDVKDFELQLCDTQPSCIGGACSEFVFSGRLDNLCSSWQARAALDRRTSIRALIDG-CEGDGLASCKGVRSVFLFDHEEVGSTSCHGAAGTLLPDCMKRRDVGLATSPSSVAME-AVVRKSFLVSADMAHALHPNYSERHDPALGPKMHGGMVLKHNANQRYATNAVTAFFFRELGARAGLPTQEFAVKSDSGCGSTIGPTLSALSGIRTVDVGSPQLSMHSIREMMGADDAVLGYRHLKAVLEKFFEIDGQLAVD 1569
+ +D + +LN +WT++HATA ++ L++AGFE+L E + VKPGGKYFFTRN SA+ AF VGGAY G+GF I+ AHTDSPCPKLKPVS ++K GF + T G + W S AGR G SH+LV+++RP++R+PTLAIHL + F PNL+ + PVLAT +KA++ DG+ +E + HHPLL+++LA EL +P ++ DF+L +CDTQPS I GA EF++SGRLDNL SS+ A +RALID +G+ LA K V+ V LFD+EEVGS S GA + MKR LA S + +E +R+SFLVSADMAHALHPNY ERH+ PKMH G+V+KHNANQRYAT AVTAF FREL R G+PTQ+F V++D GCGSTIGP LS+ GIRT+DVG PQLSMHS+REM G D + YRH KA KF E+D QL V+
Sbjct: 19 IAQDLVDYLNASWTSFHATAVSKEMLVKAGFEQLSE-EAEWVVKPGGKYFFTRNASAVIAFTVGGAYKAGNGFNIIAAHTDSPCPKLKPVSLSSKHGFLN-------VGVQTYGGGLWYTWFDRDLSVAGRVLLRRKDGRLSHELVQVSRPIMRIPTLAIHLDRNVNTEGFKPNLETHLAPVLATAIKAEV-----------------DGKKDEAXXXXXXXXKKNAHHPLLLQILADELKVDPEEIADFDLHVCDTQPSVIAGARKEFIYSGRLDNLASSYCA---------LRALIDTVADGEWLAQEKSVQMVALFDNEEVGSDSAQGAGSPTMFQAMKRVATLLAGSERAEGVEWRAIRRSFLVSADMAHALHPNYPERHEEHHQPKMHEGLVIKHNANQRYATTAVTAFLFRELAKREGIPTQDFVVRNDMGCGSTIGPILSSGVGIRTIDVGMPQLSMHSVREMCGTKDVDICYRHFKAFYRKFTELDEQLKVE 484
BLAST of mRNA_P-lacustris_contig1025.319.1 vs. uniprot
Match: A0A0D6R3V7_ARACU (Uncharacterized protein n=2 Tax=Araucariaceae TaxID=25664 RepID=A0A0D6R3V7_ARACU) HSP 1 Score: 445 bits (1144), Expect = 4.500e-146 Identity = 254/498 (51.00%), Postives = 320/498 (64.26%), Query Frame = 1 Query: 103 PLLEDFIGFLNEAWTAYHATAEARRRLLEAGFEELDESQPTHEVKPGGKYFFTRNMSAIAAFAVGGAYTDGDGFVIVGAHTDSPCPKLKPVSKAAKAGFCSWRRSRTGEACGTRGSTATWGWR----AGL----SSSAGRGSYSHDLVKINRPVLRVPTLAIHLTKADERTSFSPNLQDNFFPVLATEVKAKLAASASETGGAGDERGTADGRGEEGAGAGRNDDMHHPLLVEMLAKELGCEPGDVKDFELQLCDTQPSCIGGACSEFVFSGRLDNLCSSWQARAALDRRTSIRALIDGCEGDGLASCK-GVRSVFLFDHEEVGSTSCHGAAGTLLPDCMKRRDVGLATSPSSVAMEAVVRKSFLVSADMAHALHPNYSERHDPALGPKMHGGMVLKHNANQRYATNAVTAFFFRELGARAGLPTQEFAVKSDSGCGSTIGPTLSALSGIRTVDVGSPQLSMHSIREMMGADDAVLGYRHLKAVLEKFFEIDGQLAVD 1569
P+ D I FLN + TA+HA EA+RRL +AG+E++ E + + +KPGGKYFFTRN S I AFA+G Y G+GF IVGAHTDSPC KLKP SK K GF G G TW R AG + G SYSH+LV+I P+LR+PTLAIHL ++ F N Q + PVLAT +KA++ A + E ADG + G HH LL+E+LA E+GC+P ++ DFELQLCDTQPS I G EF+FSGR+DNLC S+ S++AL+D L + GVR V LFDHEEVGS S GA ++ D + R ++ S S V++E V++KSFLVSADMAH LHPNY +RH+ PKMH G+V+KHNANQRYATNAVT+F FRE+G LP Q+F V++D CGSTIGP L++ GIRTVD+G+PQLSMHSIREM G DD V Y+HLKA E+F ++D Q+ VD
Sbjct: 8 PVASDLIDFLNVSPTAFHAVDEAKRRLKQAGYEQILEREDWN-LKPGGKYFFTRNYSTIVAFAIGHKYAAGNGFHIVGAHTDSPCLKLKPSSKITKGGFLEIGVQTYGG-----GLWHTWFDRDLTVAGRVIVKRNIDGAISYSHELVRIQEPILRIPTLAIHLDRS-VNDGFKVNTQAHLVPVLATAIKAEVNRVAVANDKSTSE---ADGHVQASEGEDSKTTKHHLLLLELLASEIGCKPEEICDFELQLCDTQPSVIAGVAKEFIFSGRIDNLCMSF---------CSLKALLDATAAKELLQDETGVRMVALFDHEEVGSNSAQGAGSPVMLDALTRVTSSMSESDSKVSLEKVIQKSFLVSADMAHCLHPNYMDRHEENHQPKMHKGLVIKHNANQRYATNAVTSFIFREIGKMHKLPIQDFVVRNDMPCGSTIGPILASGVGIRTVDIGAPQLSMHSIREMCGVDDVVHSYQHLKAYFEEFTKLDSQIKVD 486
BLAST of mRNA_P-lacustris_contig1025.319.1 vs. uniprot
Match: J3NCD2_ORYBR (Uncharacterized protein n=12 Tax=Poaceae TaxID=4479 RepID=J3NCD2_ORYBR) HSP 1 Score: 441 bits (1133), Expect = 1.300e-144 Identity = 245/500 (49.00%), Postives = 310/500 (62.00%), Query Frame = 1 Query: 94 TAAPLLEDFIGFLNEAWTAYHATAEARRRLLEAGFEELDESQPTHEVKPGGKYFFTRNMSAIAAFAVGGAYTDGDGFVIVGAHTDSPCPKLKPVSKAAKAGFCSWRRSRTGEACGTRGSTATWGWR----AGL----SSSAGRGSYSHDLVKINRPVLRVPTLAIHLTKADERTSFSPNLQDNFFPVLATEVKAKLAASASETGGAGDERGTADGRGEEGAGAGRNDDMHHPLLVEMLAKELGCEPGDVKDFELQLCDTQPSCIGGACSEFVFSGRLDNLCSSWQARAALDRRTSIRALIDGCEGDGLASCKGVRSVFLFDHEEVGSTSCHGAAGTLLPDCMKRRDVGLATSPSSVAMEAVVRKSFLVSADMAHALHPNYSERHDPALGPKMHGGMVLKHNANQRYATNAVTAFFFRELGARAGLPTQEFAVKSDSGCGSTIGPTLSALSGIRTVDVGSPQLSMHSIREMMGADDAVLGYRHLKAVLEKFFEIDGQLAVD 1569
+ AP++ D + FLN + TA+HA EA+RRL AGF +L E + ++PG KYFFTRN S I AFA+G Y G+GF I+GAHTDSPC KLKPVS K G+ G G TW R AG G SY+H LV++ P++R+PTLAIHL + F N Q + PVLAT VK ++ E G EE +G+ + HHPLL++ +AKE C+P ++ DFELQLCDTQPS + GA EF+FSGRLDNLC S+ S++ALID D LA GVR V LFDHEEVGS S GA + D + R G S ++ +E +++SFLVSADMAHALHPNY ++H+ PK+HGG+V+KHNANQRYATNAVTAF FRE+ LP Q+F V++D GCGSTIGP L++ GIRTVD+G+PQLSMHSIREM DD Y H KA E+F E+D ++ VD
Sbjct: 3 SVAPVVCDLVDFLNASPTAFHAVDEAKRRLKAAGFSQLSEREEWVGLEPGRKYFFTRNHSTIVAFAIGAQYVAGNGFHIIGAHTDSPCLKLKPVSMVTKGGYL-----EVGVQTYGGGLWHTWFDRDLTVAGRVIVREKKDGEVSYAHKLVRVQEPIMRIPTLAIHLDRTISSEGFKINNQSHLVPVLATSVKDEMNKLVEENGP------------EESSGS--ENIKHHPLLLQFIAKEANCKPDEICDFELQLCDTQPSIVAGAMKEFIFSGRLDNLCMSF---------CSLKALIDSTSEDSLAHESGVRMVALFDHEEVGSDSAQGAGSPAMLDALSRI-TGSFNSSNARLLEKAIQRSFLVSADMAHALHPNYMDKHEENHQPKLHGGLVIKHNANQRYATNAVTAFIFREIAENHHLPVQDFVVRNDMGCGSTIGPILASGVGIRTVDIGAPQLSMHSIREMCAVDDVSHSYEHFKAYFEEFTELDSKVRVD 473 The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig1025.319.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-lacustris_contig1025.319.1 >prot_P-lacustris_contig1025.319.1 ID=prot_P-lacustris_contig1025.319.1|Name=mRNA_P-lacustris_contig1025.319.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=508bp MASKGTPTAAPLLEDFIGFLNEAWTAYHATAEARRRLLEAGFEELDESQPback to top mRNA from alignment at P-lacustris_contig1025:30632..46654+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-lacustris_contig1025.319.1 ID=mRNA_P-lacustris_contig1025.319.1|Name=mRNA_P-lacustris_contig1025.319.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=16023bp|location=Sequence derived from alignment at P-lacustris_contig1025:30632..46654+ (Pleurocladia lacustris SAG_25_93)back to top Coding sequence (CDS) from alignment at P-lacustris_contig1025:30632..46654+ >mRNA_P-lacustris_contig1025.319.1 ID=mRNA_P-lacustris_contig1025.319.1|Name=mRNA_P-lacustris_contig1025.319.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=3048bp|location=Sequence derived from alignment at P-lacustris_contig1025:30632..46654+ (Pleurocladia lacustris SAG_25_93)back to top |