Homology
BLAST of mRNA_P-lacustris_contig1024.311.1 vs. uniprot
Match:
D7FKT1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKT1_ECTSI)
HSP 1 Score: 179 bits (454), Expect = 5.960e-48
Identity = 113/184 (61.41%), Postives = 124/184 (67.39%), Query Frame = 3
Query: 51 RGLIAGSSQTRLPASPQCERCLASAYFAPREGQHDERHDAWVNLRSDLDKVQMGVATPDQLRGTYAAANAPTGPXXXXXXXRGLADALPRPDSPRGDHSARPGRDGRAHKEVAMTDREENKVEGSVGRRSHSKTIRESRRGHGRDAATPSPPREGLHVSVHLPLKPDP-AEYDALPGGKIGRGG 599
+GL+ S+ RL A LAS YFAPR GQHDER DAWV LR DLDKVQMGVATPDQLRGT+AAANAPTGPXXXXXXXRGLADA SPRG S P + GR ++ K E GRRSH+ RESRR GR ATPSPPREGLH+SV LPLKPDP Y A+ + GR G
Sbjct: 31 QGLLKLDSRHRLSA----RDALASPYFAPRHGQHDERLDAWVTLRGDLDKVQMGVATPDQLRGTFAAANAPTGPXXXXXXXRGLADAXXXXLSPRGGPSGHPSQHGRPQRD--------RKEEERAGRRSHADKARESRRARGRGVATPSPPREGLHISVQLPLKPDPPGGYGAVSVERTGRAG 202
BLAST of mRNA_P-lacustris_contig1024.311.1 vs. uniprot
Match:
D8LK48_ECTSI (Possible Cdc2-related protein kinase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LK48_ECTSI)
HSP 1 Score: 179 bits (454), Expect = 1.440e-43
Identity = 113/184 (61.41%), Postives = 124/184 (67.39%), Query Frame = 3
Query: 51 RGLIAGSSQTRLPASPQCERCLASAYFAPREGQHDERHDAWVNLRSDLDKVQMGVATPDQLRGTYAAANAPTGPXXXXXXXRGLADALPRPDSPRGDHSARPGRDGRAHKEVAMTDREENKVEGSVGRRSHSKTIRESRRGHGRDAATPSPPREGLHVSVHLPLKPDP-AEYDALPGGKIGRGG 599
+GL+ S+ RL A LAS YFAPR GQHDER DAWV LR DLDKVQMGVATPDQLRGT+AAANAPTGPXXXXXXXRGLADA SPRG S P + GR ++ K E GRRSH+ RESRR GR ATPSPPREGLH+SV LPLKPDP Y A+ + GR G
Sbjct: 1644 QGLLKLDSRHRLSA----RDALASPYFAPRHGQHDERLDAWVTLRGDLDKVQMGVATPDQLRGTFAAANAPTGPXXXXXXXRGLADAXXXXLSPRGGPSGHPSQHGRPQRD--------RKEEERAGRRSHADKARESRRARGRGVATPSPPREGLHISVQLPLKPDPPGGYGAVSVERTGRAG 1815
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig1024.311.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 2
0 1 Expect = 5.96e-48 / Id = 61.41 Expect = 1.44e-43 / Id = 61.41 Sequence D7FKT1_ECTSI D8LK48_ECTSI
Match Name E-value Identity Description
D7FKT1_ECTSI 5.960e-48 61.41 Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more] D8LK48_ECTSI 1.440e-43 61.41 Possible Cdc2-related protein kinase n=2 Tax=Ectoc... [more]
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Taxonomic scope Eukaryota Seed ortholog score 125.9 Seed ortholog evalue 1.9e-26 Seed eggNOG ortholog 2880.D8LK48 KEGG rclass RC00003,RC00060,RC00181,RC00496 KEGG ko ko:K00924,ko:K06101,ko:K11423,ko:K16675 KEGG Reaction R03875,R03938,R04866,R04867 KEGG Pathway ko00310,ko04391,map00310,map04391 Hectar predicted targeting category other localisation EggNOG free text desc. uterine gland development EggNOG OGs COG2940@1,KOG0594@1,KOG0594@2759,KOG1083@2759 Ec32 ortholog description expressed unknown protein Ec32 ortholog Ec-00_002420.1 EC 2.1.1.43,2.3.1.225 COG Functional cat. H Best tax level Eukaryota Best eggNOG OG NA|NA|NA BRITE ko00000,ko00001,ko01000,ko03036 Exons 2 Model size 1909 Cds size 567 Stop 1 Start 1
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622815296.4238284-UTR-P-lacustris_contig1024:8136..9272 1622815296.4238284-UTR-P-lacustris_contig1024:8136..9272 Pleurocladia lacustris SAG_25_93 UTR P-lacustris_contig1024 8137..9272 - 1693493458.0208354-UTR-P-lacustris_contig1024:8136..9272 1693493458.0208354-UTR-P-lacustris_contig1024:8136..9272 Pleurocladia lacustris SAG_25_93 UTR P-lacustris_contig1024 8137..9272 - 1622815296.443183-UTR-P-lacustris_contig1024:9839..9884 1622815296.443183-UTR-P-lacustris_contig1024:9839..9884 Pleurocladia lacustris SAG_25_93 UTR P-lacustris_contig1024 9840..9884 - 1693493458.0562668-UTR-P-lacustris_contig1024:9839..9884 1693493458.0562668-UTR-P-lacustris_contig1024:9839..9884 Pleurocladia lacustris SAG_25_93 UTR P-lacustris_contig1024 9840..9884 - 1622815296.4825127-UTR-P-lacustris_contig1024:10173..10334 1622815296.4825127-UTR-P-lacustris_contig1024:10173..10334 Pleurocladia lacustris SAG_25_93 UTR P-lacustris_contig1024 10174..10334 - 1693493458.065346-UTR-P-lacustris_contig1024:10173..10334 1693493458.065346-UTR-P-lacustris_contig1024:10173..10334 Pleurocladia lacustris SAG_25_93 UTR P-lacustris_contig1024 10174..10334 -
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622815296.433773-CDS-P-lacustris_contig1024:9272..9839 1622815296.433773-CDS-P-lacustris_contig1024:9272..9839 Pleurocladia lacustris SAG_25_93 CDS P-lacustris_contig1024 9273..9839 - 1693493458.044034-CDS-P-lacustris_contig1024:9272..9839 1693493458.044034-CDS-P-lacustris_contig1024:9272..9839 Pleurocladia lacustris SAG_25_93 CDS P-lacustris_contig1024 9273..9839 -
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-lacustris_contig1024.311.1
>prot_P-lacustris_contig1024.311.1 ID=prot_P-lacustris_contig1024.311.1|Name=mRNA_P-lacustris_contig1024.311.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=189bp
MGVATPDQLRGTYAAANAPTGPPPPPPPPRGLADALPRPDSPRGDHSARP back to top mRNA from alignment at P-lacustris_contig1024:8137..10334-
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-lacustris_contig1024.311.1 ID=mRNA_P-lacustris_contig1024.311.1|Name=mRNA_P-lacustris_contig1024.311.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=2198bp|location=Sequence derived from alignment at P-lacustris_contig1024:8137..10334- (Pleurocladia lacustris SAG_25_93)AAGGTTCTTGCGGCTGAGGGACACAAGGGCGTCCCCCTCGACCCCGCTCT
AGAGGACTTATTGCAGGGTCTTCTCAAACTCGACTCCCGGCATCGCCTCA
GTGCGAGAGATGCCTAGCCAGCGCGTACTTTGCACCCCGCGAGGGGCAGC
ATGATGAAAGG GTGAGCATATCAGCCATAGCCACTCACTGCCTTAGAATG
CGGTTATTTGGGTGTCATGCGGCATACCCCATGGGTGAGTTCTGCGAACC
ATGCATGCGTCGGGGGTTTCGTGTGACTGGCGGTATTGTTCGATTGTCTG
CCCTGTATCAGCACGCGTCTTGAGCGGAACGTCAAAACCTCGAAACACCA
TCGGCCTTGGAAATACCTTCTATCCCCACGGCCGCGGTCTCACGTCATGT
CTCGTGTCTATCCTTCCTACCTTCACTCTACATTTGGCATGGATATGCAG
CATGATGCATGGGTGAACCTGCGAAGTGATCTTGACAAGGTCCAG ATGGG
AGTGGCTACACCGGATCAACTCCGCGGCACATATGCCGCCGCAAACGCGC
CGACGGGGCCTCCACCTCCGCCACCTCCACCTCGAGGTCTTGCTGATGCT
CTTCCCCGGCCGGATTCACCCAGAGGCGATCATTCAGCACGCCCAGGTCG
CGATGGCCGAGCACATAAAGAGGTCGCGATGACCGACCGCGAGGAAAACA
AGGTGGAGGGGAGCGTGGGCCGCCGTTCGCATAGCAAGACCATACGCGAA
AGCAGGCGCGGGCACGGGCGAGACGCCGCGACGCCTTCCCCGCCACGTGA
GGGCCTCCACGTTTCGGTACATCTACCCCTGAAGCCTGATCCAGCAGAAT
ATGACGCCTTGCCCGGAGGGAAGATCGGCCGGGGGGGGGGGCAAACCGGG
CACGCCACGGGGATCGCGTCAATAGCCGCAGCCCAACCGCCAGGGGCGGC
AGAAGGCGAAGCCCAGCGAACGGTAGGAGGGAGAGGGAGAGGGAAAGGGA
CAGGGACGGAGACAGGACGCGGGAACGAGAACGGAGGGGGAGGAAAAGGG
ACAGGGGGGTAA CAAGGTCTCGCGAGCGCGAGTGGCACGGAAGTGAACGG
CTGGGCAAGGACCCGCGACGGGGAGATCGTTGACATTGTTGATGGTAACG
AGAGGTGTTAAAAAACACTCCAAGACGAAAGTGAGGGCAGGGCGTCTGGT
TCAGGCCCCGATTGTAAAATCGAAAACATAACCATGACGTGACGGGTGGG
GAGGTGTCTGAAGTGTATGATAAGGAATTCGGTCCGAGTCCAGGGAAGGA
AGGTGTAAGAAAAAACTTGGATTTCGAGGCGCCGAAAAAACAAAATTACG
TGGACAGAAGAAATTTTGTCCCGGTATATTATCTAGCACTACCGTAAACC
GCGAAAGTCTCGCGGCACTAAATGTCATAGTAAAATGGCCCCGTCCGAAG
CCCGGTCTCATACTCGCGATGCCCCCCCCGCCGCCAGTGAGTCGCGACAA
AGACGGTCTTATCCTGGAGCAGTAGCAACGTGGCGCACCTCACGACTACT
ACTACGAGACGGTAGCAGCACGATGGATGATAAATGGAGGACAAGACCGA
AGTATGCATTTGGTGTTTATTTTTTCCATACCGCTTCCTCGAAGGCGGCA
TAAGAAGTGACATACGACGAGCACAGCATAATTCAGCAGGTCCAACCTTT
TTCAGCGTTGAGTCGTGCTCGTGCTACTTGCGCCGCACCAAGCATATACC
CGCCACTATCTCACGTCGAGCGGTATTATTCTGGGCATCAGGGTCTAAGT
TAGACCCTGTGAACGGTTCCGTGAGGTACAAGTTCTACTCGTCTGGGCTT
TGGATTGGTGTTGGACTGAAGTAGGCGTCGGCGACGGAAAAAGAAGTTTC
TTGGCCTTTTTCCCATCCTTACGGGGTGTGCTAGCTATATCTTTCTCATA
TTTTTGCAGCCAACCGATGACAGAAGCCATGAGGAACGTGAAAGCAGCAG
CTCGGACGTCCTCCGAAGAAGCGCGCGTGCGTGCGAGGGGTTCAATGCTG
ATAGCAATTAGGGAAGATGACCCAGCCGTGAGGCGGGACTACTGTTCAAC
TGGCGTGTCTTGGGGTTTATCAACAGGGACTAAGAACTGGATCCAATGTT
GGGGGTCAGGATTCTGATGGTGGGATTTGCTGGCCCTGAAACCGTTAC back to top Coding sequence (CDS) from alignment at P-lacustris_contig1024:8137..10334-
>mRNA_P-lacustris_contig1024.311.1 ID=mRNA_P-lacustris_contig1024.311.1|Name=mRNA_P-lacustris_contig1024.311.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=1134bp|location=Sequence derived from alignment at P-lacustris_contig1024:8137..10334- (Pleurocladia lacustris SAG_25_93) back to top