mRNA_P-lacustris_contig1024.310.1 (mRNA) Pleurocladia lacustris SAG_25_93

You are viewing an mRNA, more information available on the corresponding polypeptide page

Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-lacustris_contig1024.310.1

>prot_P-lacustris_contig1024.310.1 ID=prot_P-lacustris_contig1024.310.1|Name=mRNA_P-lacustris_contig1024.310.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=379bp
MAVGLVESLMTVRLVNEITQTSSNIHREAIVGGVGNFVAGVFGGQGGNSE
IGLTMVNVESGGRTRIAAIVSGLIVLITVLGASTAINLIPLAGLVGVMLV
IAFKTFDWGSTMMVLAAVLPERYRSHKTVFEKRISRADALTIMVVTVATP
FTNLAIAVAIGIAVGCLAFVWHKSESVTAQSYFRAGYDVKDPPIIKVYEV
MGILYFASSETFLDLFDHRNDPSMVEVHMHTADIEGFSAMKTLETLGKRY
AKYGKHLRLRRIKKESRRVLTKANALMSDDVDVVMDEDPLVPQVSRPTGV
GEALVRNFFDRDPYTRRFRSRSLVGIEVPLHSNTGAITATNGTGDGGGLN
AIPIGGLGTVSWGNGPGGGASKITSAEV*
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mRNA from alignment at P-lacustris_contig1024:2721..6641+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-lacustris_contig1024.310.1 ID=mRNA_P-lacustris_contig1024.310.1|Name=mRNA_P-lacustris_contig1024.310.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=3921bp|location=Sequence derived from alignment at P-lacustris_contig1024:2721..6641+ (Pleurocladia lacustris SAG_25_93)
GAGCAGCGCAAGGAGGAGGAGCCGCATACGTGCGCTCAGTCGTGCGGCAG TCCAGTCCCGTTTAGCTGGAAGCTCTGGGTCAAGAACAATCGCGTCGAAT GGCTGGCCGGCATAACTACGGGGCTGACCGCCGTGCCCACCGCTGTGGCG TTCGCCATTTTGGCTGGCGTGGAGCCCTCCGTGGGGCTTCGCGGAACTTG GATCATCATGCTTGTGATGGCTCTCTTTGGAGGTGAGGTTCCTCCCTCCC CTTCTGTCATGAGGGTTGGGTGTGGTTCGTTTTTCCAGTGTTTTTGTGTT CGAATTTACAAAAACAAAGTTTCATTGCTGTTGTGTTGAATCAGCAGCAA GCGGAAGTGGCGGTGTGCTGTCCATGTGTGTGTTTCGAGGTGAGCTTTTC TTGTGTGGGCATGTGATGCATGGGGCGATGGTCCTTTACTCAGGACTTAG CTTATCCCTCTTTTGTCCCCCCGCGGCCTGCACTCGTTTTTCACGACTTT TCGAGCTTGGAGGAAAGTCGGGGTTGCAGAGTGACGGCGGGGCTCAAGGC GCCAGGTATTGCTGGACGGTGGAGCATGCGCAGACCCACTTATGCGTCTT CCATTTTTCGCCGTACACCGACCCGTCCAATACGACCAATCCAACGACGT CAATAATGCAGGGACGCCCTCACCTATACACCCTCGAACAACCCCCTCCG CCGCATGCTTGCGCCGAAAACTCGATCAGTGCGCGTGGTCCTCTCTGTTT TCGGATGTGATTTGAGATCCTAAGCATTCCCTCTTCTGCCTTGGAACGGC GCAGCGTTCTTCTCTCTCTTCGAAGACGCGTTCCTCGCCACGCGATTGAT TTATTCCCAATCGGGCCGCAAGGGGATGGTAGTTGGTAGTACGGTGGCGA ACCAAAGGTTCACGTTCGTCCCTTGATACGTACTCCATACAGTACATTAT ACCCGCGTTTGTTGTGGCTGTCGTCTTATCACCATGATCAGGGCGCACCG GTATGGTGTACAGCAACTCGGGTAGCATGGGCGTGATCATTGAGCCTTTA GTGCGAGACGAGAGCACGGAGATGATGTTCTACGCATTTATTCTGGCCGG TATCATCCAAATCGTGCTTGGCTCTATGGGCGTTTCGAAGCTTCTTCGCC TGATGCCCGTGAGCGTCATCATCGGTTTCGTGAATGGACTGGCTATTGTG CTCCTTTTGGCGCAAATGAAGAATTTCCAGGAAAAACTCTTCCTTGGGGG CTCGGGCAGCGAGGGTTCTAGGCGCCTGAACAGCTTCTCTGTGTTCACTG ACGGCTCCGAGTGGATAAGCGGGTCACAGCTGTGGTACACACTGCTCATC TTGATTGTCACTATGATCACGATCATCGGGTACCCCGTCCTAATCAAGAA GGCCACAGGATGCCTGTCGTCCCTCAAGCTTATCCCCGGCATTCTGGTGG GTATCATTGTGGCGACGGCAGTGGAGTGGGCGATTGTGCGTGGCGCAGCC GGATATGATGGGACTAGAACCTTGAATGACATCGCCGAAGACGTCGGCTC GTTTCCACAGCTTGCATGGTTCGATGACCAGTGGGACATGCCCCCCTAAA CGGCGACACTTTCTCGACAATACTCCCCACGGCACTCAGCCTCATGGCGG TGGGACTGGTGGAATCGCTCATGACGGTTCGCTTGGTGAACGAGATCACT CAGACGTCGTCCAACATCCATCGCGAGGCTATCGTGGGAGGCGTGGGCAA CTTCGTGGCCGGGGTGTTCGGCGGTCAGGGCGGCAACTCGGAGATCGGGC TCACGATGGTAAACGTCGAGTCCGGGGGGCGCACGCGCATCGCTGCGATA GTGTCGGGCCTTATTGTGCTGATCACGGTTCTGGGGGCATCTACGGCGAT CAACCTCATCCCCCTCGCCGGTCTCGTGGGTGTGATGCTCGTTATCGCTT TCAAAACCTTCGACTGGGGAAGCACTATGATGGTCCTGGCCGCTGTGCTA CCGGAAAGGTATCGTTCGCACAAAACAGTGTTCGAGAAGAGAATCTCGCG CGCTGACGCCTTGACCATCATGGTAGTGACCGTGGCAACCCCATTCACCA ACCTGGCCATTGCGGTTGCCATCGGTATCGCCGTTGGGTGCCTCGCGTTT GTGTGGCACAAGTCGGAGTCCGTCACCGCACAAAGTTACTTCCGTGCGGG TTACGATGTCAAGGACCCGCCCATCATCAAGGTACCCAGTGTCGAGCGTT GAAAGAGAGGACTATCGTTGGCGATGGTTGGCTACCTTGTTTGCCTGCCT GCTGTCCCTATGGAATGGAACAAACTGAGCCCGCTCCTCAACGACTTCTG TTATAATCTTCTGTCCCTCCCCTTCATCTCCGACGAAAAAGGTGTACGAA GTCATGGGCATCCTCTACTTCGCCTCCAGTGAAACCTTCCTCGACCTTTT CGACCACCGCAACGACCCTTCCATGGTAGAGGTCCACATGCACACTGCCG ATATCGAAGGTTTCAGTGCCATGAAGACCCTTGAGACTCTTGGAAAGCGC TATGCGAAATATGGCAAGCATCTCCGCCTGCGTAGGATCAAGAAGGAGTC CCGGCGCGTCCTCACGTGAGTATATCGTCGTGGAATCACCACGACCAACC GGCGCGTCCTCACGTTAAGTATATCGTCGTGGAATCACCGCGACCAATGT TCCTGCTGCATAGCATGCAGGAATTTAGCGTTCGAGGTCGACGGCGTCCA AATGTTGGAATTCATGTCGATGCTGGCGGTCGTGTCATATCTGCACCTCG GCTCCCACCACGTCATTTTGCCATTTTGTCATTTTTGCGACGTTTTTTGG CAAGGTGCAGGGTCCTCATCGACGCCGCCTGGTGTTTGACGTGCCTATTT GGAAAGCCGACGCATCAGATCGCACGTGCAGTACATTCAGCCTCTCGCCG TTCACCCGTCTCATCGTCCCACCCGACCTCGCCCTTATTTTCAGCAAGGC AAATGCGCTCATGTCGGATGATGTAGATGTGGTGATGGATGAGGACCCAC TCGTGCCCCAGGTGTCACGCCCAACGGGTGTGGGGGAAGCTCTCGTCCGT AACTTCTTCGACAGGGACCCGTACACTCGTCGCTTCAGGTCCAGGTCCCT GGTAGGAATAGAGGTCCCGTTGCATAGCAACACCGGGGCAATCACGGCCA CTAACGGTACCGGCGACGGTGGTGGTTTGAACGCCATCCCTATTGGTGGG TTAGGCACCGTTTCTTGGGGAAATGGACCGGGTGGTGGCGCCTCGAAGAT CACGTCGGCCGAGGTCTAAGCCGGTTGTGGGATTGCGTTGGAACGGTGCG ATACGCGGAAAAAATGAGACAAAAGAACGAGTGGTAGCTGTAGCCTTCGC TCAATTGTATCCTGTACTATCCAATCCGATCCTACCCGATCCTTGTATTC TTGGTTTGTGCGCTTGATGAGCGAGCGCTTGCTGGAACGGAAACGTTGAC GCTGCCTTTCGCCCTGGGTTGTACGTGGCTAGTTTTCTGCTTCATTCTGT CGATGCAGATGAATTTGGCGGGGGGCAGAGTGAGGGAGAATGAAAGGTGT TGTGTTCCTGTGGCCGGTCTCCGCGTTTGTGTACCTCTGCGTTTTAGTGC TGCTGCGCCTGTCTAGGAGTATTCATACAACGGTGTTGGGAGGGGAGAAA GAAGAGCGTTCAAGTTGATGCGGGCGCAGCGTCTAGAGGTTATACATACA ACGCCCTTTCACCACCATTTTTCCATTGTCGGAAAATGAGAAGGCGTGCA TTGTATGCAAATCGGCACTTGATGACTTTCAATTTGATCAGCAGGAATCG GTCCTATACGGTCACGCGACGGTTTGTAATGCGGTCTGATTGATATCATT GGATAATGTGATTCGAACAGG
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Coding sequence (CDS) from alignment at P-lacustris_contig1024:2721..6641+

>mRNA_P-lacustris_contig1024.310.1 ID=mRNA_P-lacustris_contig1024.310.1|Name=mRNA_P-lacustris_contig1024.310.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=2274bp|location=Sequence derived from alignment at P-lacustris_contig1024:2721..6641+ (Pleurocladia lacustris SAG_25_93)
ATGGCGGTGGGACTGGTGGAATCGCTCATGACGGTTCGCTTGGTGAACGA
GATCACTCAGACGTCGTCCAACATCCATCGCGAGGCTATCGTGGGAGGCG
TGGGCAACTTCGTGGCCGGGGTGTTCGGCGGTCAGGGCGGCAACTCGGAG
ATCGGGCTCACGATGGTAAACGTCGAGTCCGGGGGGCGCACGCGCATCGC
TGCGATAGTGTCGGGCCTTATTGTGCTGATCACGGTTCTGGGGGCATCTA
CGGCGATCAACCTCATCCCCCTCGCCGGTCTCGTGGGTGTGATGCTCGTT
ATCGCTTTCAAAACCTTCGACTGGGGAAGCACTATGATGGTCCTGGCCGC
TGTGCTACCGGAAAGGTATCGTTCGCACAAAACAGTGTTCGAGAAGAGAA
TCTCGCGCGCTGACGCCTTGACCATCATGGTAGTGACCGTGGCAACCCCA
TTCACCAACCTGGCCATTGCGGTTGCCATCGGTATCGCCGTTGGGTGCCT
CGCGTTTGTGTGGCACAAGTCGGAGTCCGTCACCGCACAAAGTTACTTCC
GTGCGGGTTACGATGTCAAGGACCCGCCCATCATCAAGATGGCGGTGGGA
CTGGTGGAATCGCTCATGACGGTTCGCTTGGTGAACGAGATCACTCAGAC
GTCGTCCAACATCCATCGCGAGGCTATCGTGGGAGGCGTGGGCAACTTCG
TGGCCGGGGTGTTCGGCGGTCAGGGCGGCAACTCGGAGATCGGGCTCACG
ATGGTAAACGTCGAGTCCGGGGGGCGCACGCGCATCGCTGCGATAGTGTC
GGGCCTTATTGTGCTGATCACGGTTCTGGGGGCATCTACGGCGATCAACC
TCATCCCCCTCGCCGGTCTCGTGGGTGTGATGCTCGTTATCGCTTTCAAA
ACCTTCGACTGGGGAAGCACTATGATGGTCCTGGCCGCTGTGCTACCGGA
AAGGTATCGTTCGCACAAAACAGTGTTCGAGAAGAGAATCTCGCGCGCTG
ACGCCTTGACCATCATGGTAGTGACCGTGGCAACCCCATTCACCAACCTG
GCCATTGCGGTTGCCATCGGTATCGCCGTTGGGTGCCTCGCGTTTGTGTG
GCACAAGTCGGAGTCCGTCACCGCACAAAGTTACTTCCGTGCGGGTTACG
ATGTCAAGGACCCGCCCATCATCAAGGTGTACGAAGTCATGGGCATCCTC
TACTTCGCCTCCAGTGAAACCTTCCTCGACCTTTTCGACCACCGCAACGA
CCCTTCCATGGTAGAGGTCCACATGCACACTGCCGATATCGAAGGTTTCA
GTGCCATGAAGACCCTTGAGACTCTTGGAAAGCGCTATGCGAAATATGGC
AAGCATCTCCGCCTGCGTAGGATCAAGAAGGAGTCCCGGCGCGTCCTCAC
GTGTACGAAGTCATGGGCATCCTCTACTTCGCCTCCAGTGAAACCTTCCT
CGACCTTTTCGACCACCGCAACGACCCTTCCATGGTAGAGGTCCACATGC
ACACTGCCGATATCGAAGGTTTCAGTGCCATGAAGACCCTTGAGACTCTT
GGAAAGCGCTATGCGAAATATGGCAAGCATCTCCGCCTGCGTAGGATCAA
GAAGGAGTCCCGGCGCGTCCTCACCAAGGCAAATGCGCTCATGTCGGATG
ATGTAGATGTGGTGATGGATGAGGACCCACTCGTGCCCCAGGTGTCACGC
CCAACGGGTGTGGGGGAAGCTCTCGTCCGTAACTTCTTCGACAGGGACCC
GTACACTCGTCGCTTCAGGTCCAGGTCCCTGGTAGGAATAGAGGTCCCGT
TGCATAGCAACACCGGGGCAATCACGGCCACTAACGGTACCGGCGACGGT
GGTGGTTTGAACGCCATCCCTATTGGTGGGTTAGGCACCGTTTCTTGGGG
AAATGGACCGGGTGGTGGCGCCTCGAAGATCACGTCGGCCGAGGTCTAAC
AAGGCAAATGCGCTCATGTCGGATGATGTAGATGTGGTGATGGATGAGGA
CCCACTCGTGCCCCAGGTGTCACGCCCAACGGGTGTGGGGGAAGCTCTCG
TCCGTAACTTCTTCGACAGGGACCCGTACACTCGTCGCTTCAGGTCCAGG
TCCCTGGTAGGAATAGAGGTCCCGTTGCATAGCAACACCGGGGCAATCAC
GGCCACTAACGGTACCGGCGACGGTGGTGGTTTGAACGCCATCCCTATTG
GTGGGTTAGGCACCGTTTCTTGGGGAAATGGACCGGGTGGTGGCGCCTCG
AAGATCACGTCGGCCGAGGTCTAA
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