mRNA_P-lacustris_contig1021.299.1 (mRNA) Pleurocladia lacustris SAG_25_93

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-lacustris_contig1021.299.1
Unique NamemRNA_P-lacustris_contig1021.299.1
TypemRNA
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Homology
[Close]
BLAST of mRNA_P-lacustris_contig1021.299.1 vs. uniprot
Match: D8LGV3_ECTSI (2OG-Fe(II) oxygenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGV3_ECTSI)

HSP 1 Score: 340 bits (872), Expect = 4.750e-113
Identity = 206/314 (65.61%), Postives = 228/314 (72.61%), Query Frame = 1 
Query:   25 CETFHLQDHTGKLRLWPSLLAGSAQQRLFEELTLNPDLLPLDPTTSSGGGXXX-----GGNSGLSRREDGNAARGRWMQRPIKLFGREILQPRLTCFYGLKGVTYRYSGKTLEAMPWEGVPAIQEILAAAEAATGVQPGYFNCVLLNWY--GTDRLHGVALGYEAREPDDEKELEKGAAIASVSLGAGRRFQLRRKTDKTQQVELLLGGGSLLLMEGTTQENWQHCVPKRTAKEERDLQKRADREREGVESLS--LRPSSLQAGRIASRASPSADESGRGGGLTLLTVGGPARAPGGAGGDIGGRINLTFRRVK 939
            CETFHLQ  TGKLR WPSLL  +AQ+RLFEELT++PDL PLDP   S   XXX      GN GL  REDG AARGRWMQRPIKLFGREI QPRLTCFYG  GV+YRYSGKTLEA PW+GVPAIQEILAAA AA GV PGYFNCVLLNWY  G D        Y     DDEKELEKGAAIASVSLGAGRRFQLRRK D  Q+VE +LGGGSLLLMEG+TQE+WQH VPKRTAKEER++ +++ +ER   ++LS  L   S Q G+ +S  S    ESG  G +T   VG        + G  GGRINLTFRRVK
Sbjct:   48 CETFHLQSGTGKLRFWPSLLTDAAQRRLFEELTVDPDLRPLDPKAGSSXXXXXXXXXXSGNPGL--REDG-AARGRWMQRPIKLFGREIPQPRLTCFYGRTGVSYRYSGKTLEATPWDGVPAIQEILAAAGAAAGVDPGYFNCVLLNWYRDGAD--------YMGWHSDDEKELEKGAAIASVSLGAGRRFQLRRKKDHAQKVEFILGGGSLLLMEGSTQEHWQHRVPKRTAKEEREV-RQSPQERREAKALSPLLLSWSGQGGKESS--SLKTGESGGNGSITGGRVGSSLLTS--SAGARGGRINLTFRRVK 345
[Close]
BLAST of mRNA_P-lacustris_contig1021.299.1 vs. uniprot
Match: A0A1I0I7I8_9BACT (DNA-N1-methyladenine dioxygenase n=1 Tax=Hymenobacter actinosclerus TaxID=82805 RepID=A0A1I0I7I8_9BACT)

HSP 1 Score: 135 bits (341), Expect = 3.130e-35
Identity = 79/154 (51.30%), Postives = 100/154 (64.94%), Query Frame = 1 
Query:  238 WMQRPIKLFGREILQPRLTCFYGLKGVTYRYSGKTLEAMPWEGVPAIQEILAAAEAATGVQPGYFNCVLLNWYGTDRLHGVALGYEAREPDDEKELEKGAAIASVSLGAGRRFQLR-RKTDKTQQVELLLGGGSLLLMEGTTQENWQHCVPKRT 696
            W Q+PIKLFG+E++QPRLT +YG    TYRYSG  LE +PW  +PA+Q++ A  E ATG +   FN VLLN Y   R    ++GY A   DDE EL     IAS++LGA R F+LR R++   Q + L L  GSLLLM G TQ+NW H +PK T
Sbjct:   38 WQQQPIKLFGKEVMQPRLTAWYGDPKATYRYSGLRLEPLPW--LPALQQLRAHLETATGAR---FNSVLLNLY---RSGQDSMGYHA---DDEPELGPEPVIASLTLGATRTFRLRPRRSVAAQALSLPLLAGSLLLMRGATQQNWLHALPKTT 180
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BLAST of mRNA_P-lacustris_contig1021.299.1 vs. uniprot
Match: A0A6H5J9B1_9PHAE (Fe2OG dioxygenase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9B1_9PHAE)

HSP 1 Score: 132 bits (331), Expect = 2.560e-34
Identity = 85/152 (55.92%), Postives = 107/152 (70.39%), Query Frame = 1 
Query:  508 DDEKELEKGAAIASVSLGAGRRFQLRRKTDKTQQVELLLGGGSLLLMEGTTQENWQHCVPKRTAKEERDLQKRADREREGVESLS--LRPSSLQAGRIASRASPSADESGRG------GGLTLLTVGGPARAPGGAGGDIGGRINLTFRRVK 939
            DDEKELEKGAAIASVSLGAGRRF+LR + D+TQ++E +LGGGSLLLMEG+TQE+WQH VPKRTAKEER++ + + +ER   ++LS  L   S Q G++ S  + + +  G G      GG +LLT    AR         GGRINLTFRR+K
Sbjct:    6 DDEKELEKGAAIASVSLGAGRRFELRGRKDRTQKMEFVLGGGSLLLMEGSTQEHWQHRVPKRTAKEEREILQ-SPQERRKAKALSPLLLSWSGQGGKVLSSLN-TGESGGNGSIAGGPGGSSLLTSSAGAR---------GGRINLTFRRIK 146
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BLAST of mRNA_P-lacustris_contig1021.299.1 vs. uniprot
Match: UPI0003615D09 (alpha-ketoglutarate-dependent dioxygenase AlkB n=1 Tax=Hymenobacter aerophilus TaxID=119644 RepID=UPI0003615D09)

HSP 1 Score: 133 bits (334), Expect = 3.490e-34
Identity = 78/152 (51.32%), Postives = 96/152 (63.16%), Query Frame = 1 
Query:  238 WMQRPIKLFGREILQPRLTCFYGLKGVTYRYSGKTLEAMPWEGVPAIQEILAAAEAATGVQPGYFNCVLLNWYGTDRLHGVALGYEAREPDDEKELEKGAAIASVSLGAGRRFQLR-RKTDKTQQVELLLGGGSLLLMEGTTQENWQHCVPK 690
            W Q PIKLFGRE++QPRLT +YG    TYRYSG  LE +PW  +PA+Q + A  EAATG +   FN VLLN Y   R    ++GY A   DDE EL     IAS++LGA R F+L+ R     Q + L L  GSLL+M G TQ+NW H +PK
Sbjct:   38 WRQEPIKLFGREVMQPRLTAWYGDPNATYRYSGLHLEPLPW--LPALQHLRAQLEAATGAR---FNSVLLNLY---RSGQDSMGYHA---DDEPELGPAPVIASLTLGATRTFRLKPRPGVPAQALSLPLPAGSLLVMRGETQQNWLHALPK 178
[Close]
BLAST of mRNA_P-lacustris_contig1021.299.1 vs. uniprot
Match: A0A1S9B515_9BACT (Alpha-ketoglutarate-dependent dioxygenase AlkB n=1 Tax=Hymenobacter sp. CRA2 TaxID=1955620 RepID=A0A1S9B515_9BACT)

HSP 1 Score: 130 bits (326), Expect = 5.760e-33
Identity = 78/154 (50.65%), Postives = 94/154 (61.04%), Query Frame = 1 
Query:  238 WMQRPIKLFGREILQPRLTCFYGLKGVTYRYSGKTLEAMPWEGVPAIQEILAAAEAATGVQPGYFNCVLLNWYGTDRLHGVALGYEAREPDDEKELEKGAAIASVSLGAGRRFQLRRKTDKTQQ---VELLLGGGSLLLMEGTTQENWQHCVPK 690
            W   PIKLFGRE++QPRLT ++G  GV YRYSG  L+  PW   PA+Q +    +AATG     FN VLLN Y T +    ++G+ A   DDE EL     IASVSLGA RRF+LR +         + L LG GSLLLM+G TQ  WQH VPK
Sbjct:   38 WRHEPIKLFGREVMQPRLTAWHGDAGVAYRYSGLQLQPEPW--TPALQMLREQVQAATGAA---FNSVLLNLYRTGQ---DSMGWHA---DDEPELGPQPVIASVSLGATRRFRLRPRPGSGPAHPPISLDLGSGSLLLMQGDTQRYWQHAVPK 180
[Close]
BLAST of mRNA_P-lacustris_contig1021.299.1 vs. uniprot
Match: A0A372E5B5_9BACT (Alpha-ketoglutarate-dependent dioxygenase AlkB n=1 Tax=Hymenobacter sp. CCM 8763 TaxID=2303334 RepID=A0A372E5B5_9BACT)

HSP 1 Score: 128 bits (322), Expect = 2.120e-32
Identity = 74/152 (48.68%), Postives = 97/152 (63.82%), Query Frame = 1 
Query:  238 WMQRPIKLFGREILQPRLTCFYGLKGVTYRYSGKTLEAMPWEGVPAIQEILAAAEAATGVQPGYFNCVLLNWYGTDRLHGVALGYEAREPDDEKELEKGAAIASVSLGAGRRFQLR-RKTDKTQQVELLLGGGSLLLMEGTTQENWQHCVPK 690
            W Q+PI+LFG+E++QPR+T +YG    TYRYSG  L+ +PW  +PA+Q++ A  EAATG +   FN VLLN Y   R    ++GY A   D+E EL     IAS++LGA R F+LR R       + L L  GSLLLM G TQ+NW H +PK
Sbjct:   38 WQQQPIRLFGKEVMQPRMTAWYGDPEATYRYSGLRLDPLPW--LPALQQLRARVEAATGAR---FNSVLLNLY---RSGHDSMGYHA---DNEPELGPAPVIASLTLGATRTFRLRPRPGVPAHGLSLPLTAGSLLLMRGPTQQNWLHALPK 178
[Close]
BLAST of mRNA_P-lacustris_contig1021.299.1 vs. uniprot
Match: W8ERE1_9BACT (Fe2OG dioxygenase domain-containing protein n=1 Tax=Hymenobacter swuensis DY53 TaxID=1227739 RepID=W8ERE1_9BACT)

HSP 1 Score: 127 bits (318), Expect = 8.230e-32
Identity = 77/154 (50.00%), Postives = 93/154 (60.39%), Query Frame = 1 
Query:  238 WMQRPIKLFGREILQPRLTCFYGLKGVTYRYSGKTLEAMPWEGVPAIQEILAAAEAATGVQPGYFNCVLLNWYGTDRLHGVALGYEAREPDDEKELEKGAAIASVSLGAGRRFQLRRKT---DKTQQVELLLGGGSLLLMEGTTQENWQHCVPK 690
            W   PI+LFG+E+LQPRLT +YG  G TYRYSG TLE +PW  +PA+  +    EAATG +   FN VLLN Y T +    ++GY A   DDE EL     IASV+LGA R F+LR +           L L  GSLLLM G TQ NW H +PK
Sbjct:   38 WRHEPIRLFGKEVLQPRLTGWYGDAGATYRYSGLTLEPLPW--LPALHALRRQVEAATGSR---FNSVLLNLYRTGQ---DSMGYHA---DDEPELGPEPVIASVTLGATRTFRLRPRPVLQPVPAAFSLALTTGSLLLMRGPTQRNWLHALPK 180
[Close]
BLAST of mRNA_P-lacustris_contig1021.299.1 vs. uniprot
Match: UPI0015A0875D (alpha-ketoglutarate-dependent dioxygenase AlkB n=1 Tax=Hymenobacter terrestris TaxID=2748310 RepID=UPI0015A0875D)

HSP 1 Score: 126 bits (317), Expect = 1.160e-31
Identity = 75/152 (49.34%), Postives = 95/152 (62.50%), Query Frame = 1 
Query:  238 WMQRPIKLFGREILQPRLTCFYGLKGVTYRYSGKTLEAMPWEGVPAIQEILAAAEAATGVQPGYFNCVLLNWYGTDRLHGVALGYEAREPDDEKELEKGAAIASVSLGAGRRFQLR-RKTDKTQQVELLLGGGSLLLMEGTTQENWQHCVPK 690
            W Q PIKLFG++I+QPRLT +YG    TY YSG  LE +PW  +P +Q++    EAATG +   FN VLLN Y   R    ++GY A   D+E EL    AIAS++LGA R F+L+ R     Q + L L  GSLLLM G TQ+NW H +PK
Sbjct:   38 WQQTPIKLFGKDIMQPRLTAWYGDPEATYTYSGLRLEPLPW--LPTLQQLRMRIEAATGTR---FNSVLLNLY---RSGQDSMGYHA---DNEPELGPAPAIASLTLGATRTFRLKPRPGVPAQALSLPLTAGSLLLMRGPTQQNWLHALPK 178
[Close]
BLAST of mRNA_P-lacustris_contig1021.299.1 vs. uniprot
Match: A0A431U9K3_9BACT (Alpha-ketoglutarate-dependent dioxygenase AlkB n=2 Tax=Hymenobacter gummosus TaxID=1776032 RepID=A0A431U9K3_9BACT)

HSP 1 Score: 126 bits (316), Expect = 1.710e-31
Identity = 77/155 (49.68%), Postives = 92/155 (59.35%), Query Frame = 1 
Query:  238 WMQRPIKLFGREILQPRLTCFYGLKGVTYRYSGKTLEAMPWEGVPAIQEILAAAEAATGVQPGYFNCVLLNWYGTDRLHGV-ALGYEAREPDDEKELEKGAAIASVSLGAGRRFQLRRKTDKTQQ---VELLLGGGSLLLMEGTTQENWQHCVPK 690
            W   PIKLFG+E+LQPRLT +YG  G  YRYSG T++  PW   PA+Q++    E A       FN VLLN Y     HG  ++G+ A   DDE EL     IASVSLGA RRF+LR +         + L L GGSLLLM+G TQ  WQH VPK
Sbjct:   38 WRHEPIKLFGKEVLQPRLTAWYGDAGAAYRYSGLTMQPEPW--TPALQQLRRRVETACAAA---FNSVLLNLY----RHGQDSMGWHA---DDEPELGPAPVIASVSLGAPRRFRLRPRPGTGPAHPPLTLELPGGSLLLMQGPTQHYWQHAVPK 180
[Close]
BLAST of mRNA_P-lacustris_contig1021.299.1 vs. uniprot
Match: A0A5R8WU25_9BACT (Alpha-ketoglutarate-dependent dioxygenase AlkB n=1 Tax=Hymenobacter jeollabukensis TaxID=2025313 RepID=A0A5R8WU25_9BACT)

HSP 1 Score: 125 bits (314), Expect = 3.470e-31
Identity = 77/155 (49.68%), Postives = 93/155 (60.00%), Query Frame = 1 
Query:  238 WMQRPIKLFGREILQPRLTCFYGLKGVTYRYSGKTLEAMPWEGVPAIQEILAAAEAATGVQPGYFNCVLLNWYGTDRLHGV-ALGYEAREPDDEKELEKGAAIASVSLGAGRRFQLRRKTDKTQ---QVELLLGGGSLLLMEGTTQENWQHCVPK 690
            W   PI LFG+ +LQPRLT ++G  G +YRYSG  L+  PW   PA+Q +    EAA+G    +FN VLLN Y     HG  ++G+ A   DDE EL     IASVSLGA RRF+LR +         V L LG GSLLLM+G TQ  WQH VPK
Sbjct:   38 WRHEPITLFGKPVLQPRLTAWHGDAGASYRYSGLQLQPAPW--TPALQALRQRVEAASGA---HFNSVLLNLY----RHGQDSMGWHA---DDEPELGPAPVIASVSLGATRRFRLRPRPGSGPVHAPVGLELGSGSLLLMQGPTQRYWQHAVPK 180
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig1021.299.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LGV3_ECTSI4.750e-11365.612OG-Fe(II) oxygenase n=1 Tax=Ectocarpus siliculosu... [more]
A0A1I0I7I8_9BACT3.130e-3551.30DNA-N1-methyladenine dioxygenase n=1 Tax=Hymenobac... [more]
A0A6H5J9B1_9PHAE2.560e-3455.92Fe2OG dioxygenase domain-containing protein n=1 Ta... [more]
UPI0003615D093.490e-3451.32alpha-ketoglutarate-dependent dioxygenase AlkB n=1... [more]
A0A1S9B515_9BACT5.760e-3350.65Alpha-ketoglutarate-dependent dioxygenase AlkB n=1... [more]
A0A372E5B5_9BACT2.120e-3248.68Alpha-ketoglutarate-dependent dioxygenase AlkB n=1... [more]
W8ERE1_9BACT8.230e-3250.00Fe2OG dioxygenase domain-containing protein n=1 Ta... [more]
UPI0015A0875D1.160e-3149.34alpha-ketoglutarate-dependent dioxygenase AlkB n=1... [more]
A0A431U9K3_9BACT1.710e-3149.68Alpha-ketoglutarate-dependent dioxygenase AlkB n=2... [more]
A0A5R8WU25_9BACT3.470e-3149.68Alpha-ketoglutarate-dependent dioxygenase AlkB n=1... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig1021contigP-lacustris_contig1021:65197..67656 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score265.8
Seed ortholog evalue2e-68
Seed eggNOG ortholog2880.D8LGV3
Preferred nameALKBH3
KEGG koko:K10859,ko:K10860
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005829,GO:0006139,GO:0006259,GO:0006281,GO:0006304,GO:0006307,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008198,GO:0008283,GO:0009451,GO:0009987,GO:0016070,GO:0016491,GO:0016705,GO:0016706,GO:0016787,GO:0031974,GO:0031981,GO:0032451,GO:0033554,GO:0034641,GO:0035510,GO:0035511,GO:0035513,GO:0035514,GO:0035515,GO:0035552,GO:0035553,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043734,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0044728,GO:0046483,GO:0046872,GO:0046914,GO:0050896,GO:0051213,GO:0051716,GO:0051747,GO:0055114,GO:0070013,GO:0070988,GO:0070989,GO:0071704,GO:0080111,GO:0090304,GO:0140097,GO:0140098,GO:1901360,GO:1990930
EggNOG free text desc.RNA N1-methyladenosine dioxygenase activity
EggNOG OGs2QW9E@2759,COG3145@1
Ec32 ortholog descriptionAlpha-ketoglutarate-dependent dioxygenase AlkB-like
Ec32 orthologEc-28_001310.1
EC1.14.11.33,1.14.11.54
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03400
Exons4
Model size968
Cds size708
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig1021.299.1prot_P-lacustris_contig1021.299.1Pleurocladia lacustris SAG_25_93polypeptideP-lacustris_contig1021 65437..67636 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815293.613006-UTR-P-lacustris_contig1021:65196..654361622815293.613006-UTR-P-lacustris_contig1021:65196..65436Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig1021 65197..65436 +
1693493456.6440911-UTR-P-lacustris_contig1021:65196..654361693493456.6440911-UTR-P-lacustris_contig1021:65196..65436Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig1021 65197..65436 +
1622815293.6617475-UTR-P-lacustris_contig1021:67636..676561622815293.6617475-UTR-P-lacustris_contig1021:67636..67656Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig1021 67637..67656 +
1693493456.6895928-UTR-P-lacustris_contig1021:67636..676561693493456.6895928-UTR-P-lacustris_contig1021:67636..67656Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig1021 67637..67656 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815293.622239-CDS-P-lacustris_contig1021:65436..655221622815293.622239-CDS-P-lacustris_contig1021:65436..65522Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1021 65437..65522 +
1693493456.6575267-CDS-P-lacustris_contig1021:65436..655221693493456.6575267-CDS-P-lacustris_contig1021:65436..65522Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1021 65437..65522 +
1622815293.630816-CDS-P-lacustris_contig1021:66448..666301622815293.630816-CDS-P-lacustris_contig1021:66448..66630Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1021 66449..66630 +
1693493456.6650007-CDS-P-lacustris_contig1021:66448..666301693493456.6650007-CDS-P-lacustris_contig1021:66448..66630Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1021 66449..66630 +
1622815293.6392758-CDS-P-lacustris_contig1021:66974..670751622815293.6392758-CDS-P-lacustris_contig1021:66974..67075Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1021 66975..67075 +
1693493456.6724079-CDS-P-lacustris_contig1021:66974..670751693493456.6724079-CDS-P-lacustris_contig1021:66974..67075Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1021 66975..67075 +
1622815293.6491623-CDS-P-lacustris_contig1021:67297..676361622815293.6491623-CDS-P-lacustris_contig1021:67297..67636Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1021 67298..67636 +
1693493456.680203-CDS-P-lacustris_contig1021:67297..676361693493456.680203-CDS-P-lacustris_contig1021:67297..67636Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1021 67298..67636 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-lacustris_contig1021.299.1

>prot_P-lacustris_contig1021.299.1 ID=prot_P-lacustris_contig1021.299.1|Name=mRNA_P-lacustris_contig1021.299.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=236bp
MQRPIKLFGREILQPRLTCFYGLKGVTYRYSGKTLEAMPWEGVPAIQEIL
AAAEAATGVQPGYFNCVLLNWYGTDRLHGVALGYEAREPDDEKELEKGAA
IASVSLGAGRRFQLRRKTDKTQQVELLLGGGSLLLMEGTTQENWQHCVPK
RTAKEERDLQKRADREREGVESLSLRPSSLQAGRIASRASPSADESGRGG
GLTLLTVGGPARAPGGAGGDIGGRINLTFRRVKVS*
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mRNA from alignment at P-lacustris_contig1021:65197..67656+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-lacustris_contig1021.299.1 ID=mRNA_P-lacustris_contig1021.299.1|Name=mRNA_P-lacustris_contig1021.299.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=2460bp|location=Sequence derived from alignment at P-lacustris_contig1021:65197..67656+ (Pleurocladia lacustris SAG_25_93)
GCATCAGCAGCGGCTACGTGCGCGTGTGAAACCTTTCATCTCCAAGACCA
CACGGGGAAGCTAAGGCTCTGGCCATCTCTCCTGGCCGGTTCTGCACAAC
AGCGACTGTTTGAGGAGCTTACTCTTAACCCTGACCTGCTACCTCTCGAC
CCCACGACTAGTAGTGGCGGCGGTACTAGTAGTGGGGGCAACAGCGGACT
CTCGCGGCGCGAAGACGGCAACGCAGCACGGGGGCGATGGATGCAGCGGC
CAATAAAACTCTTCGGGAGGGAGATTTTGCAGCCTCGGCTCACTTGCTTT
TACGGTCTGAAGGGCGTAACCTATAGGTAGTGGTGGTAGGTGTATTCCCC
CATGTGTTGTTGCGGCCGATGCCTCGGTTTGTGAATCGGTCCAGGGGTTA
TGAAGAAGCTCCTCTCTACTACGGAACCCGGTGTAGTGTATGTGCTGTGT
CCGTCACGAAAGCAGCGAGTCGTATGACGCTCGGCTCGTCAGTACAGACT
ATGAAAGATACGCGAGACATGTCGGTGGTGTTGTGCTAGACGCATGGTCT
GTGTGCATGTTCTCCACACCTCCGTTCACAGCTAGCCTCACAGAGTAGTC
TAGACTCGAACGGACAAGTTGTGCCAGATTGCAGTCCACGCACGTGGCTT
TCGGGCGTTCCGAGGGAGGTATGCATATCTTAGGTAGTGTCCGTGCTTGC
CAAATGGAGGTCCATATCTTGCAGTGCCGAACCGTACGATTGCCCGCCTC
CTCTCTCTAAGAGCTCCGACGTGCTTCGTCACATGGCCGCCTTCGAGTTA
AGCGATGCATCATCCATGCTTGATCTAAGGCAGGGAGGAGGGCTCAATAT
TCTCGTGTGGTAATCTTGTGACTAATGTAGTAAATCGGTAATGAAAAGTG
GGCTAGTTCCTCCTGCAGCAGTCTCAGCATTGCGTAGCACATTGGTCCTG
CAATAGTGCCAACATGCCGTAACACATCTGATGATGGTGCTTCTCTCGCG
CGTCTCGATACCATGCGGGATAGGCCGTTTAGAGTGAACCTGCGTATCTC
GGCCATGCCCAGCATCACCCCAGTAAGAAATACCGTCTGGCGCCAAAACG
ATCATCACACTAGCGCCAGGATCCCCGGGGATGGATCCAGGGTTGTCCTT
GGCACCCACAGGCGAGCAGCGCAACGCTTGTTCGCCTGTTTGTGCCTTCA
CTATTATTTTCCTTTTTTTTTTCATGAACGCCGTTTTGTTTTTCTGCTAT
AGATACAGCGGTAAGACTCTCGAGGCCATGCCGTGGGAGGGCGTGCCCGC
GATCCAGGAAATTCTCGCCGCCGCAGAAGCCGCGACCGGGGTTCAACCCG
GATACTTCAACTGCGTCCTTCTCAATTGGTACGGGACGGACCGACTACAT
GGGGTGGCACTCGGGTATGAGGCGCGCGAACCAGGTTCGACTGCACTGAC
TGGCTCGATGATAGCCGCAGTACTACGTGCGGCGCCTTGTGTTGCTGCGT
GATTGGTGTAGCATGGAACGAAAAACCCGACCTTTTGCCAGCTGGTTTTG
CTTGCGATACGTTGTGACGATGTGGGGCGGCATCCTTCTGCGTGAACGCT
GCCGAGATACACCGGTCGAACGAAGACAGGCCAAGACAATACCTCAGCCC
TTGGGGTTGGTCTTTGGTTGAGCCTAAGCCTGCCCGGTATTTTCCAAGGA
GCTCGGGCGTTCTTTTCACCGCTCCGACCACCCCCCACTCCCGACCCCCA
ACAAAACCACGGGTGTTGCGGCAACAAGATGATGAAAAGGAGCTCGAGAA
GGGGGCAGCGATAGCGTCCGTTTCGCTCGGCGCGGGGCGACGGTTTCAGC
TGCGGCGAAAAACGGACAAGACCCAACAGGCGAGCTGTGTTTGTTGTTAT
TCTTGTTGTTGTTGCTGTTTTTGTTGTTGTTGTTTTCCCCGTCCCTCGTC
CGAACTACCTTGTGTCGGCGCGTGTCCTTAGTGCCTCTCGACCGTGGATC
TTGTGATGCTGCTGCCCCCTGCCTGCGATCTATCGCAACCATCTCTCCTG
TGCGGGCTTCCTTTCTCATTTCTTGCTCGGTGTCGAATCATGTTTGCTTA
GGTGGAGCTACTCCTCGGTGGAGGCTCGCTGCTTCTCATGGAAGGTACCA
CACAAGAGAACTGGCAGCACTGCGTGCCGAAGCGCACTGCAAAGGAGGAG
CGCGACTTGCAAAAACGAGCAGACCGAGAGAGAGAGGGGGTCGAGTCTTT
GTCGTTGAGGCCATCGTCGCTCCAAGCAGGGAGGATAGCCAGCAGGGCGT
CCCCAAGTGCGGATGAATCCGGCCGGGGAGGTGGGCTAACGCTGTTGACG
GTGGGAGGACCAGCACGAGCACCAGGAGGAGCGGGCGGGGACATCGGAGG
AAGAATCAACCTGACGTTTAGACGCGTCAAAGTATCTTGAAGGGCGAAAA
GATTGCATGC
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Coding sequence (CDS) from alignment at P-lacustris_contig1021:65197..67656+

>mRNA_P-lacustris_contig1021.299.1 ID=mRNA_P-lacustris_contig1021.299.1|Name=mRNA_P-lacustris_contig1021.299.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=1416bp|location=Sequence derived from alignment at P-lacustris_contig1021:65197..67656+ (Pleurocladia lacustris SAG_25_93)
ATGCAGCGGCCAATAAAACTCTTCGGGAGGGAGATTTTGCAGCCTCGGCT
CACTTGCTTTTACGGTCTGAAGGGCGTAACCTATAGATGCAGCGGCCAAT
AAAACTCTTCGGGAGGGAGATTTTGCAGCCTCGGCTCACTTGCTTTTACG
GTCTGAAGGGCGTAACCTATAGATACAGCGGTAAGACTCTCGAGGCCATG
CCGTGGGAGGGCGTGCCCGCGATCCAGGAAATTCTCGCCGCCGCAGAAGC
CGCGACCGGGGTTCAACCCGGATACTTCAACTGCGTCCTTCTCAATTGGT
ACGGGACGGACCGACTACATGGGGTGGCACTCGGGTATGAGGCGCGCGAA
CCAGATACAGCGGTAAGACTCTCGAGGCCATGCCGTGGGAGGGCGTGCCC
GCGATCCAGGAAATTCTCGCCGCCGCAGAAGCCGCGACCGGGGTTCAACC
CGGATACTTCAACTGCGTCCTTCTCAATTGGTACGGGACGGACCGACTAC
ATGGGGTGGCACTCGGGTATGAGGCGCGCGAACCAGATGATGAAAAGGAG
CTCGAGAAGGGGGCAGCGATAGCGTCCGTTTCGCTCGGCGCGGGGCGACG
GTTTCAGCTGCGGCGAAAAACGGACAAGACCCAACAGATGATGAAAAGGA
GCTCGAGAAGGGGGCAGCGATAGCGTCCGTTTCGCTCGGCGCGGGGCGAC
GGTTTCAGCTGCGGCGAAAAACGGACAAGACCCAACAGGTGGAGCTACTC
CTCGGTGGAGGCTCGCTGCTTCTCATGGAAGGTACCACACAAGAGAACTG
GCAGCACTGCGTGCCGAAGCGCACTGCAAAGGAGGAGCGCGACTTGCAAA
AACGAGCAGACCGAGAGAGAGAGGGGGTCGAGTCTTTGTCGTTGAGGCCA
TCGTCGCTCCAAGCAGGGAGGATAGCCAGCAGGGCGTCCCCAAGTGCGGA
TGAATCCGGCCGGGGAGGTGGGCTAACGCTGTTGACGGTGGGAGGACCAG
CACGAGCACCAGGAGGAGCGGGCGGGGACATCGGAGGAAGAATCAACCTG
ACGTTTAGACGCGTCAAAGTATCTTGAGTGGAGCTACTCCTCGGTGGAGG
CTCGCTGCTTCTCATGGAAGGTACCACACAAGAGAACTGGCAGCACTGCG
TGCCGAAGCGCACTGCAAAGGAGGAGCGCGACTTGCAAAAACGAGCAGAC
CGAGAGAGAGAGGGGGTCGAGTCTTTGTCGTTGAGGCCATCGTCGCTCCA
AGCAGGGAGGATAGCCAGCAGGGCGTCCCCAAGTGCGGATGAATCCGGCC
GGGGAGGTGGGCTAACGCTGTTGACGGTGGGAGGACCAGCACGAGCACCA
GGAGGAGCGGGCGGGGACATCGGAGGAAGAATCAACCTGACGTTTAGACG
CGTCAAAGTATCTTGA
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