Homology
BLAST of mRNA_P-lacustris_contig102.281.1 vs. uniprot
Match:
D7FY71_ECTSI (DNA topoisomerase VI subunit A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY71_ECTSI)
HSP 1 Score: 757 bits (1954), Expect = 2.830e-258
Identity = 385/421 (91.45%), Postives = 394/421 (93.59%), Query Frame = 2
Query: 1472 GSAAMSSAKPAKLAEDVEVVLRRLRKLRGEMARGXXXXXXXXXXXXXXXXXXXTLLELGLSGDVTEVQEMGAAGVMDEIERIAVETALSIMEGKGFGFRVPTRSSGNQKYVEELDRIVLGDKVSFRNFVSTAMARKTAITTRVIQLVHQVLGKGIHITKRDMFYTDVKLFKDQSESDHVLDDVACMIGCTRSCLNVVASDKGLVVGRVTFMEDGDLIDCTRMGVGGKAIPPYIDKITDIRSDADFILLVEKEAAYMRMAEDRFYQKYPCIVITAKGQPDVATRLFLKRLKRELNIPVMGLVDSDPYGLKILSVYMSGSKNMSYDSASLTTPDIKWLGVRPSDLDRYNIPEQCRLDMTEHDIKTGKELLQEDFIKKNEPWCRELELMIKSKKKAEIQSLSAFGFQYLTHTYLPQKLQNGDWV 2734
G +SSAKPAKLA+DVEVVLRRLRKLRG+M RG TLLELGLSGDVTEV+EMGAAGVMDEIERIAVETALSIMEG GFGFRVPTRSSGNQKYVEELDRIVLGDKVS RNFVSTAMARKTAITTRV+QLVHQVLGKGIHITKRDMFYTDVKLFK+QSESD+VLDDVACM+GCTRSCLNVVASDKGLVVGRVTFMEDGDLIDCTRMGVGGKAIPPYIDKIT+IRSDADFILLVEKEAAYMRMAEDRFYQKYPCIVITAKGQPDVATRLFLKRLKRELNIPVMGLVDSDPYGLKILSVYMSGSKNMSYDSASLTTPDIKWLGVRPSDLDRYNIPEQCRLDMTEHDIKTGKELLQEDFIKKNEPWCRELELMIKSKKKAEIQSLSAFGFQYLT YLPQKLQNGDWV
Sbjct: 223 GGGVLSSAKPAKLADDVEVVLRRLRKLRGQMGRGGGGSADGDADRKKQP----TLLELGLSGDVTEVREMGAAGVMDEIERIAVETALSIMEGNGFGFRVPTRSSGNQKYVEELDRIVLGDKVSSRNFVSTAMARKTAITTRVVQLVHQVLGKGIHITKRDMFYTDVKLFKEQSESDNVLDDVACMVGCTRSCLNVVASDKGLVVGRVTFMEDGDLIDCTRMGVGGKAIPPYIDKITNIRSDADFILLVEKEAAYMRMAEDRFYQKYPCIVITAKGQPDVATRLFLKRLKRELNIPVMGLVDSDPYGLKILSVYMSGSKNMSYDSASLTTPDIKWLGVRPSDLDRYNIPEQCRLDMTEHDIKTGKELLQEDFIKKNEPWCRELELMIKSKKKAEIQSLSAFGFQYLTQNYLPQKLQNGDWV 639
BLAST of mRNA_P-lacustris_contig102.281.1 vs. uniprot
Match:
A0A6H5KKC7_9PHAE (TP6A_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKC7_9PHAE)
HSP 1 Score: 718 bits (1853), Expect = 1.410e-240
Identity = 357/368 (97.01%), Postives = 365/368 (99.18%), Query Frame = 2
Query: 1631 TLLELGLSGDVTEVQEMGAAGVMDEIERIAVETALSIMEGKGFGFRVPTRSSGNQKYVEELDRIVLGDKVSFRNFVSTAMARKTAITTRVIQLVHQVLGKGIHITKRDMFYTDVKLFKDQSESDHVLDDVACMIGCTRSCLNVVASDKGLVVGRVTFMEDGDLIDCTRMGVGGKAIPPYIDKITDIRSDADFILLVEKEAAYMRMAEDRFYQKYPCIVITAKGQPDVATRLFLKRLKRELNIPVMGLVDSDPYGLKILSVYMSGSKNMSYDSASLTTPDIKWLGVRPSDLDRYNIPEQCRLDMTEHDIKTGKELLQEDFIKKNEPWCRELELMIKSKKKAEIQSLSAFGFQYLTHTYLPQKLQNGDWV 2734
TLLELGLSGDVTEV+EMGAAGVMDEIERIAVETALSIM+G GFGFRVPTRSSGNQKYVEELDRIVLGDKVS RNFVSTAMARKTAITTRV+QLVHQVLGKGIHITKRDMFYTDVKLFK+QSESD+VLDDVACM+GCTRSCLNVVASDKGLVVGRVTFMEDGDLIDCTRMGVGGKAIPPYIDKIT+IRSDADFILLVEKEAAYMRMAEDRFYQKYPCIVITAKGQPDVATRLFLKRLKRELNIPVMGLVDSDPYGLKILSVYMSGSKNMSYDSASLTTPDIKWLGVRPSDLDRYNIPEQCRLDMTEHDIKTGKELLQE+FIKKNEPWCRELELMIKSKKKAEIQSLSAFGFQYLTH YLPQKLQNGDWV
Sbjct: 442 TLLELGLSGDVTEVREMGAAGVMDEIERIAVETALSIMKGNGFGFRVPTRSSGNQKYVEELDRIVLGDKVSSRNFVSTAMARKTAITTRVVQLVHQVLGKGIHITKRDMFYTDVKLFKEQSESDNVLDDVACMVGCTRSCLNVVASDKGLVVGRVTFMEDGDLIDCTRMGVGGKAIPPYIDKITNIRSDADFILLVEKEAAYMRMAEDRFYQKYPCIVITAKGQPDVATRLFLKRLKRELNIPVMGLVDSDPYGLKILSVYMSGSKNMSYDSASLTTPDIKWLGVRPSDLDRYNIPEQCRLDMTEHDIKTGKELLQEEFIKKNEPWCRELELMIKSKKKAEIQSLSAFGFQYLTHNYLPQKLQNGDWV 809
BLAST of mRNA_P-lacustris_contig102.281.1 vs. uniprot
Match:
A0A4D9D7D3_9STRA (TP6A_N domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D7D3_9STRA)
HSP 1 Score: 565 bits (1456), Expect = 6.800e-185
Identity = 275/368 (74.73%), Postives = 320/368 (86.96%), Query Frame = 2
Query: 1631 TLLELGLSGDVTEVQEMGAAGVMDEIERIAVETALSIMEGKGFGFRVPTRSSGNQKYVEELDRIVLGDKVSFRNFVSTAMARKTAITTRVIQLVHQVLGKGIHITKRDMFYTDVKLFKDQSESDHVLDDVACMIGCTRSCLNVVASDKGLVVGRVTFMEDGDLIDCTRMGVGGKAIPPYIDKITDIRSDADFILLVEKEAAYMRMAEDRFYQKYPCIVITAKGQPDVATRLFLKRLKRELNIPVMGLVDSDPYGLKILSVYMSGSKNMSYDSASLTTPDIKWLGVRPSDLDRYNIPEQCRLDMTEHDIKTGKELLQEDFIKKNEPWCRELELMIKSKKKAEIQSLSAFGFQYLTHTYLPQKLQNGDWV 2734
TL +LG++ V EV +M GV+ EIE+ + A I+ G+GF ++VPTRS+ NQ Y+ ELDRIVL DKV+ R F++ RKTAITTR++QLVH+VL KGIHITKRDMFYTDVKLF+DQ +SD VLDDVACM+GCTRSCLNVVAS+KGLVVGRV F EDGD IDCTRMGVGGKAIPPY+DKI I+SDA FILLVEKEAAYMR+AEDRFY KYPCIVITAKGQPDVATRLFLK+LK EL+IPV+GLVDSDPYGLKILSVYM+GSKNMSYDSASLTT DIKWLGVRPSDLD+Y IP QCRLDMT+HD++TG++LLQEDFI+KN W +EL+LM+K KKKAEIQ+LSAFGFQY+T YLP+KL+ GDW+
Sbjct: 207 TLADLGIT-TVREVSDMAPEGVLFEIEKTILAAAGMILRGEGFSYQVPTRSATNQLYIAELDRIVLSDKVATRAFLNPREVRKTAITTRIMQLVHEVLSKGIHITKRDMFYTDVKLFRDQKDSDVVLDDVACMLGCTRSCLNVVASEKGLVVGRVQFEEDGDFIDCTRMGVGGKAIPPYVDKIARIQSDAKFILLVEKEAAYMRLAEDRFYNKYPCIVITAKGQPDVATRLFLKKLKTELHIPVLGLVDSDPYGLKILSVYMTGSKNMSYDSASLTTSDIKWLGVRPSDLDKYGIPPQCRLDMTDHDMRTGRQLLQEDFIQKNPEWVKELQLMLKMKKKAEIQALSAFGFQYITEDYLPRKLEKGDWI 573
BLAST of mRNA_P-lacustris_contig102.281.1 vs. uniprot
Match:
A0A5J4YXA0_PORPP (DNA topoisomerase 6 subunit A n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YXA0_PORPP)
HSP 1 Score: 543 bits (1400), Expect = 4.390e-179
Identity = 259/358 (72.35%), Postives = 306/358 (85.47%), Query Frame = 2
Query: 1661 VTEVQEMGAAGVMDEIERIAVETALSIMEGKGFGFRVPTRSSGNQKYVEELDRIVLGDKVSFRNFVSTAMARKTAITTRVIQLVHQVLGKGIHITKRDMFYTDVKLFKDQSESDHVLDDVACMIGCTRSCLNVVASDKGLVVGRVTFMEDGDLIDCTRMGVGGKAIPPYIDKITDIRSDADFILLVEKEAAYMRMAEDRFYQKYPCIVITAKGQPDVATRLFLKRLKRELNIPVMGLVDSDPYGLKILSVYMSGSKNMSYDSASLTTPDIKWLGVRPSDLDRYNIPEQCRLDMTEHDIKTGKELLQEDFIKKNEPWCRELELMIKSKKKAEIQSLSAFGFQYLTHTYLPQKLQNGDWV 2734
V EVQEMGA GVM + + SIM+G+GF VP+RS+ NQ Y+ ELDRIVL DK + RNF S A RK AIT R++QLVH++ KGIH+TKRD+FYTDVKLFK Q+ESD VL+D+ACM+GCTR+ L+VVAS+KG+V+GRV F E GD IDCTRMGVGGKAIPP+ DKIT+IRSDA+FILLVEK+AA+MR+AEDRFY + PCI+ITAKGQPDVATRLFLKRLK LNIP++GLVDSDPYGLKILSVYMSGSKNMSYDSA+LTTPDIKWLGVRPSDLDRYNIPEQCRL M+EHDI+TGKE+LQE+FI NE W RELE+M+K K+KAEIQ+LS FGFQ+LT +LP+K+ GDW+
Sbjct: 52 VKEVQEMGATGVMQGVLSLCAHATDSIMKGEGFSLLVPSRSASNQMYIAELDRIVLKDKATARNFASQATVRKAAITVRILQLVHELCKKGIHVTKRDLFYTDVKLFKSQTESDDVLNDIACMVGCTRTSLSVVASEKGIVIGRVQFREAGDEIDCTRMGVGGKAIPPFTDKITEIRSDAEFILLVEKDAAFMRLAEDRFYNRCPCIIITAKGQPDVATRLFLKRLKNTLNIPILGLVDSDPYGLKILSVYMSGSKNMSYDSANLTTPDIKWLGVRPSDLDRYNIPEQCRLPMSEHDIRTGKEMLQEEFISSNEAWARELEMMVKRKEKAEIQALSNFGFQFLTQEFLPRKIAAGDWI 409
BLAST of mRNA_P-lacustris_contig102.281.1 vs. uniprot
Match:
A0A2V3ITM9_9FLOR (DNA topoisomerase 6 subunit A n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ITM9_9FLOR)
HSP 1 Score: 544 bits (1401), Expect = 4.800e-179
Identity = 265/368 (72.01%), Postives = 313/368 (85.05%), Query Frame = 2
Query: 1631 TLLELGLSGDVTEVQEMGAAGVMDEIERIAVETALSIMEGKGFGFRVPTRSSGNQKYVEELDRIVLGDKVSFRNFVSTAMARKTAITTRVIQLVHQVLGKGIHITKRDMFYTDVKLFKDQSESDHVLDDVACMIGCTRSCLNVVASDKGLVVGRVTFMEDGDLIDCTRMGVGGKAIPPYIDKITDIRSDADFILLVEKEAAYMRMAEDRFYQKYPCIVITAKGQPDVATRLFLKRLKRELNIPVMGLVDSDPYGLKILSVYMSGSKNMSYDSASLTTPDIKWLGVRPSDLDRYNIPEQCRLDMTEHDIKTGKELLQEDFIKKNEPWCRELELMIKSKKKAEIQSLSAFGFQYLTHTYLPQKLQNGDWV 2734
TL ++ + G + EV E+G V IE + A SI++G+GF + VPTRS+GNQ YVEELDRIVL DK S R F +T+ RKTAITTRV+ LV ++ K IH TKRD++YTDVKLF+ Q ESD VL+DVACM+GCTR+ L+VVAS+KG+V+GRV F E GDLIDCTRMGVGGKAIPPYI+KIT+I+SDADFILLVEK+AA+MR+AEDRFY KYPCI+ITAKGQPDVATRL LK+LK L IP++GLVDSDPYGLKILSVYMSGSKNMSYDSA+LTTPDIKWLGVRPSDL++Y IP+QCRL MTEHDIKTGKELL+EDFIKKNE W +ELELM+K+K+KAEIQ+LS FGFQYLT YLP+KL GDW+
Sbjct: 54 TLSDINIQGVLKEVLELGGLFVRRRIESALADVARSILDGRGFRYVVPTRSAGNQLYVEELDRIVLKDKTSVRAFANTSTVRKTAITTRVMGLVWELCKKRIHTTKRDLYYTDVKLFRTQGESDEVLNDVACMLGCTRTSLSVVASEKGIVIGRVQFREAGDLIDCTRMGVGGKAIPPYIEKITEIQSDADFILLVEKDAAFMRLAEDRFYNKYPCIIITAKGQPDVATRLLLKKLKDTLKIPILGLVDSDPYGLKILSVYMSGSKNMSYDSANLTTPDIKWLGVRPSDLNKYGIPDQCRLAMTEHDIKTGKELLEEDFIKKNEAWYKELELMVKNKEKAEIQALSNFGFQYLTEEYLPRKLAQGDWI 421
BLAST of mRNA_P-lacustris_contig102.281.1 vs. uniprot
Match:
A0A7S3LSR4_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LSR4_9STRA)
HSP 1 Score: 542 bits (1397), Expect = 1.310e-178
Identity = 261/369 (70.73%), Postives = 316/369 (85.64%), Query Frame = 2
Query: 1631 TLLELGLSGDVTEVQEMGAAGVMDEIERIAVETALSIMEGKGFGFRVPTRSSGNQKYVEELDRIVL-GDKVSFRNFVSTAMARKTAITTRVIQLVHQVLGKGIHITKRDMFYTDVKLFKDQSESDHVLDDVACMIGCTRSCLNVVASDKGLVVGRVTFMEDGDLIDCTRMGVGGKAIPPYIDKITDIRSDADFILLVEKEAAYMRMAEDRFYQKYPCIVITAKGQPDVATRLFLKRLKRELNIPVMGLVDSDPYGLKILSVYMSGSKNMSYDSASLTTPDIKWLGVRPSDLDRYNIPEQCRLDMTEHDIKTGKELLQEDFIKKNEPWCRELELMIKSKKKAEIQSLSAFGFQYLTHTYLPQKLQNGDWV 2734
TL ELG+ DVTEV+ M V +IE + +E +I+ GKGF ++VP+RS+ NQ Y+ ELDRI L DKV+ R+FV+TA +KT +TTRV+QL+H VL K IHITKRD+FYTDVKLF DQ+ SD VLDDVACM+GCTR+ LNVVAS+KG+VVG++ F++DGD IDC+RMG GGKAIPP+ D++T+I SDA+FILLVEK+AA+MR+AEDRFY YPCI+ITAKGQPDVATR+FLKRL+ EL IPV+GLVDSDPYGLKILSVYMSGSKNMSYDSASLTT IKWLGVRPSDLDRYNIPEQCRL MTE+DIKTGK +LQED+++KN W +EL+LMIK+KKKAEIQ+LS+FGFQYLT YLPQK++ GDW+
Sbjct: 43 TLEELGIKDDVTEVEVMSEEKVSKKIEELIMECVKTILLGKGFEYKVPSRSTTNQLYIPELDRIALKNDKVTVRSFVNTAHVKKTTVTTRVMQLIHNVLNKNIHITKRDLFYTDVKLFVDQAASDGVLDDVACMLGCTRTSLNVVASEKGVVVGKLRFVDDGDPIDCSRMGAGGKAIPPFTDRLTNIESDAEFILLVEKDAAFMRLAEDRFYNSYPCIIITAKGQPDVATRMFLKRLREELKIPVLGLVDSDPYGLKILSVYMSGSKNMSYDSASLTTKGIKWLGVRPSDLDRYNIPEQCRLPMTENDIKTGKAMLQEDWVQKNPEWVKELDLMIKTKKKAEIQALSSFGFQYLTQVYLPQKIKRGDWI 411
BLAST of mRNA_P-lacustris_contig102.281.1 vs. uniprot
Match:
W4HDB4_9STRA (TP6A_N domain-containing protein n=11 Tax=Aphanomyces astaci TaxID=112090 RepID=W4HDB4_9STRA)
HSP 1 Score: 543 bits (1399), Expect = 1.940e-178
Identity = 263/368 (71.47%), Postives = 317/368 (86.14%), Query Frame = 2
Query: 1631 TLLELGLSGDVTEVQEMGAAGVMDEIERIAVETALSIMEGKGFGFRVPTRSSGNQKYVEELDRIVLGDKVSFRNFVSTAMARKTAITTRVIQLVHQVLGKGIHITKRDMFYTDVKLFKDQSESDHVLDDVACMIGCTRSCLNVVASDKGLVVGRVTFMEDGDLIDCTRMGVGGKAIPPYIDKITDIRSDADFILLVEKEAAYMRMAEDRFYQKYPCIVITAKGQPDVATRLFLKRLKRELNIPVMGLVDSDPYGLKILSVYMSGSKNMSYDSASLTTPDIKWLGVRPSDLDRYNIPEQCRLDMTEHDIKTGKELLQEDFIKKNEPWCRELELMIKSKKKAEIQSLSAFGFQYLTHTYLPQKLQNGDWV 2734
TL EL + +V EV+EM V EIE + V SI+ G+GF + VP+R++ NQ YV ELDRIVL DK+S R+F + + RKTAITT+V++LVHQ+L KGIH+TKRD+FYTDVKLFKDQSESD +LDDVACM+GCTRS L+VVAS+KG+VVGR+ F +DGDLIDCTRMGVGGKAIPPYID++TDI SDA FILLVEK+AA+MR+AEDRFY KYPCI++TAKGQPDVATR+FLKR++ EL++PV+GLVDSDPYGLKILSVYMSGSKNMSYDSASLT DIKWLGVRPSDL +Y IP+QCRL M E DIKTGK++L+E+FIKKN W +ELELM+KSK+KAEIQ+LS FGFQ+LT YLPQKL++GDW+
Sbjct: 75 TLAELNVF-NVREVREMVPTEVSTEIESMVVGVVSSILRGEGFRYAVPSRTTANQIYVTELDRIVLADKLSVRDFTNMSAVRKTAITTKVMELVHQLLAKGIHVTKRDLFYTDVKLFKDQSESDTILDDVACMVGCTRSSLHVVASEKGVVVGRIAFRDDGDLIDCTRMGVGGKAIPPYIDRLTDITSDAKFILLVEKDAAFMRLAEDRFYNKYPCIILTAKGQPDVATRMFLKRIQNELHLPVLGLVDSDPYGLKILSVYMSGSKNMSYDSASLTCRDIKWLGVRPSDLTKYKIPDQCRLPMKETDIKTGKDMLEEEFIKKNPLWSKELELMLKSKEKAEIQALSTFGFQFLTQEYLPQKLRDGDWI 441
BLAST of mRNA_P-lacustris_contig102.281.1 vs. uniprot
Match:
A0A0U9HK84_KLENI (DNA topoisomerase 6 subunit A n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A0U9HK84_KLENI)
HSP 1 Score: 541 bits (1395), Expect = 3.230e-178
Identity = 256/368 (69.57%), Postives = 313/368 (85.05%), Query Frame = 2
Query: 1631 TLLELGLSGDVTEVQEMGAAGVMDEIERIAVETALSIMEGKGFGFRVPTRSSGNQKYVEELDRIVLGDKVSFRNFVSTAMARKTAITTRVIQLVHQVLGKGIHITKRDMFYTDVKLFKDQSESDHVLDDVACMIGCTRSCLNVVASDKGLVVGRVTFMEDGDLIDCTRMGVGGKAIPPYIDKITDIRSDADFILLVEKEAAYMRMAEDRFYQKYPCIVITAKGQPDVATRLFLKRLKRELNIPVMGLVDSDPYGLKILSVYMSGSKNMSYDSASLTTPDIKWLGVRPSDLDRYNIPEQCRLDMTEHDIKTGKELLQEDFIKKNEPWCRELELMIKSKKKAEIQSLSAFGFQYLTHTYLPQKLQNGDWV 2734
TL +L L EV ++GA V+ EIE+ + A SI+ G GFG+ +PTR+S NQ YV +LDRIVL DK SFR + + + RKTAITTR++QL+HQ+ KGIH+TKRD+FYTDVKLF++Q +SD +LDDV+CM+GCTRS LNVV S+KG+VVGR+ F+EDGD+IDCT+MGVGGKAIPP IDK+T +SDA FILLVEK+AA+MR+AEDRFY ++PC++ITAKGQPDVATRLFLK++K EL IPV+GLVDSDPYGLKILSVYMSGSKNMSYDS++LTTPDIKWLGVRPSDLDR+ IPEQCRL MT+ D+KTGKE+L+EDFIKK+ W ELELM+K K+KAEIQ+LS+FGFQYLT YLP KLQ GDW+
Sbjct: 50 TLQDLNLPNVSKEVVDLGAPQVISEIEKTMLSVAASILNGHGFGYTIPTRTSANQLYVPQLDRIVLKDKSSFRQYGNMSTVRKTAITTRILQLIHQLCNKGIHVTKRDLFYTDVKLFQEQGQSDTILDDVSCMLGCTRSSLNVVGSEKGVVVGRLIFVEDGDVIDCTKMGVGGKAIPPNIDKVTGFQSDAKFILLVEKDAAFMRLAEDRFYNRFPCVIITAKGQPDVATRLFLKKMKSELKIPVLGLVDSDPYGLKILSVYMSGSKNMSYDSSNLTTPDIKWLGVRPSDLDRFKIPEQCRLPMTDADMKTGKEMLEEDFIKKDPRWHAELELMVKKKEKAEIQALSSFGFQYLTEVYLPMKLQEGDWI 417
BLAST of mRNA_P-lacustris_contig102.281.1 vs. uniprot
Match:
A0A7S4HJY7_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HJY7_9STRA)
HSP 1 Score: 542 bits (1396), Expect = 1.850e-177
Identity = 261/361 (72.30%), Postives = 310/361 (85.87%), Query Frame = 2
Query: 1652 SGDVTEVQEMGAAGVMDEIERIAVETALSIMEGKGFGFRVPTRSSGNQKYVEELDRIVLGDKVSFRNFVSTAMARKTAITTRVIQLVHQVLGKGIHITKRDMFYTDVKLFKDQSESDHVLDDVACMIGCTRSCLNVVASDKGLVVGRVTFMEDGDLIDCTRMGVGGKAIPPYIDKITDIRSDADFILLVEKEAAYMRMAEDRFYQKYPCIVITAKGQPDVATRLFLKRLKRELNIPVMGLVDSDPYGLKILSVYMSGSKNMSYDSASLTTPDIKWLGVRPSDLDRYNIPEQCRLDMTEHDIKTGKELLQEDFIKKNEPWCRELELMIKSKKKAEIQSLSAFGFQYLTHTYLPQKLQNGDWV 2734
S + EV +M + V++ IE IAV+ A ++ +GF +P+R++ NQ YV ELDRIVLG+K R+F++ +RKTAIT RV+QL+H VL K IHITKRD+FYTDVKLF DQ ESD VLDDVACM+GCTRS L+VVASDKGLVVGR+ F EDGD IDCTRMGVGGKAIPPYIDKI I+SDA+F+LLVEKEAAYMR+AEDRFY +YPCIVITAKGQPDVATR+FL RL EL IPV+GLVDSDPYGLKILSVYMSGSKNMSYDSASLTTPDIKWLG+RPSDLD+Y++PEQCRLDMTE+DIKTGKELL+E+FI KN W +EL+LM+K+KKKAEIQ+LS+FGFQY+T YLP+K++ GDW+
Sbjct: 116 SSAIVEVDDMSSLEVVEGIEGIAVKIATQVLAKRGFALEIPSRAASNQIYVPELDRIVLGNKKGTRSFLNVKESRKTAITARVLQLLHSVLMKRIHITKRDLFYTDVKLFVDQQESDVVLDDVACMVGCTRSNLHVVASDKGLVVGRINFYEDGDFIDCTRMGVGGKAIPPYIDKIESIKSDAEFVLLVEKEAAYMRLAEDRFYHRYPCIVITAKGQPDVATRMFLSRLTSELQIPVLGLVDSDPYGLKILSVYMSGSKNMSYDSASLTTPDIKWLGLRPSDLDKYDLPEQCRLDMTENDIKTGKELLKEEFIMKNPKWMKELQLMVKTKKKAEIQALSSFGFQYITEEYLPRKIKEGDWL 476
BLAST of mRNA_P-lacustris_contig102.281.1 vs. uniprot
Match:
B7FQ86_PHATC (Type II DNA topoisomerase VI subunit n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FQ86_PHATC)
HSP 1 Score: 540 bits (1390), Expect = 2.830e-177
Identity = 261/367 (71.12%), Postives = 315/367 (85.83%), Query Frame = 2
Query: 1634 LLELGLSGDVTEVQEMGAAGVMDEIERIAVETALSIMEGKGFGFRVPTRSSGNQKYVEELDRIVLGDKVSFRNFVSTAMARKTAITTRVIQLVHQVLGKGIHITKRDMFYTDVKLFKDQSESDHVLDDVACMIGCTRSCLNVVASDKGLVVGRVTFMEDGDLIDCTRMGVGGKAIPPYIDKITDIRSDADFILLVEKEAAYMRMAEDRFYQKYPCIVITAKGQPDVATRLFLKRLKRELNIPVMGLVDSDPYGLKILSVYMSGSKNMSYDSASLTTPDIKWLGVRPSDLDRYNIPEQCRLDMTEHDIKTGKELLQEDFIKKNEPWCRELELMIKSKKKAEIQSLSAFGFQYLTHTYLPQKLQNGDWV 2734
+L G+ D+ EV E+ A V++ +E +A+ A ++E KGF +P+R++ NQ YV+E DRIVLG K S R+F++ +RK+AIT RV+QL+H VL K IHITKRD+FYTDVKLF DQ+ESD VLDDVA MIGCTRS L+VVASDKGLVVGR+ F EDGD IDCT+MGVGGKAIPPYIDKI +I SDA+FILLVEKEAAYMRMAEDRFY +YPCI+ITAKGQPDVATR+FL R+ EL IPV+GLVDSDPYGLKILSVYMSGSKNMSYDSASLTTPDIKWLG+RPSDLD+Y++PEQCRLDMTE+DIKTGKE+++EDFI+KN W +ELE+M+K+KKKAEIQ+LS+FGFQY+T YLP+KL+ GDW+
Sbjct: 64 VLPEGIPSDIVEVVELPATQVLEGMEAMALHIAQQVLERKGFSLEIPSRAASNQIYVKEWDRIVLGGKRSSRSFLNVKESRKSAITLRVMQLLHAVLMKRIHITKRDLFYTDVKLFVDQAESDGVLDDVATMIGCTRSNLHVVASDKGLVVGRIQFEEDGDFIDCTKMGVGGKAIPPYIDKIENIASDAEFILLVEKEAAYMRMAEDRFYHRYPCIIITAKGQPDVATRMFLARITSELKIPVLGLVDSDPYGLKILSVYMSGSKNMSYDSASLTTPDIKWLGLRPSDLDKYDLPEQCRLDMTENDIKTGKEMMKEDFIQKNPEWMKELEIMVKTKKKAEIQALSSFGFQYVTEQYLPRKLKEGDWI 430
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig102.281.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 2.83e-258 / Id = 91.45 Expect = 1.41e-240 / Id = 97.01 Expect = 6.80e-185 / Id = 74.73 Expect = 4.39e-179 / Id = 72.35 Expect = 4.80e-179 / Id = 72.01 Expect = 1.31e-178 / Id = 70.73 Expect = 1.94e-178 / Id = 71.47 Expect = 3.23e-178 / Id = 69.57 Expect = 1.85e-177 / Id = 72.30 Expect = 2.83e-177 / Id = 71.12 Sequence D7FY71_ECTSI A0A6H5KKC7_9PHAE A0A4D9D7D3_9STRA A0A5J4YXA0_PORPP A0A2V3ITM9_9FLOR A0A7S3LSR4_9STRA W4HDB4_9STRA A0A0U9HK84_KLENI A0A7S4HJY7_9STRA B7FQ86_PHATC Pages
back to top
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Taxonomic scope Eukaryota Seed ortholog score 758.1 Seed ortholog evalue 4.4e-216 Seed eggNOG ortholog 2880.D7FY71 Preferred name TOP6A KEGG ko ko:K03166,ko:K10878 KEGG Pathway ko04113,map04113 Hectar predicted targeting category other localisation GOs GO:0000003,GO:0000228,GO:0000280,GO:0000706,GO:0000729,GO:0001708,GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0003916,GO:0003918,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007049,GO:0007127,GO:0007131,GO:0008094,GO:0008150,GO:0008152,GO:0008544,GO:0009888,GO:0009913,GO:0009957,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016788,GO:0016817,GO:0016818,GO:0016853,GO:0016887,GO:0016889,GO:0016894,GO:0017111,GO:0022402,GO:0022414,GO:0030154,GO:0030855,GO:0031974,GO:0031981,GO:0032502,GO:0033554,GO:0034641,GO:0035825,GO:0042138,GO:0042623,GO:0042802,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0045165,GO:0046483,GO:0048285,GO:0048856,GO:0048869,GO:0050896,GO:0051321,GO:0051716,GO:0060429,GO:0061505,GO:0061982,GO:0070013,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0097159,GO:0140013,GO:0140097,GO:1901360,GO:1901363,GO:1903046 EggNOG free text desc. DNA topoisomerase VI subunit A EggNOG OGs COG1697@1,KOG2795@2759 Ec32 ortholog description DNA topoisomerase VI subunit A Ec32 ortholog Ec-24_003570.1 EC 5.99.1.3 COG Functional cat. L Best tax level Eukaryota Best eggNOG OG NA|NA|NA BRITE ko00000,ko00001,ko01000,ko03032,ko03400 Exons 11 Model size 3864 Cds size 2469 Stop 1 Start 1
Relationships
The following UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622815291.303645-UTR-P-lacustris_contig102:222176..222264 1622815291.303645-UTR-P-lacustris_contig102:222176..222264 Pleurocladia lacustris SAG_25_93 UTR P-lacustris_contig102 222177..222264 + 1693493454.9008229-UTR-P-lacustris_contig102:222176..222264 1693493454.9008229-UTR-P-lacustris_contig102:222176..222264 Pleurocladia lacustris SAG_25_93 UTR P-lacustris_contig102 222177..222264 + 1622815291.3153527-UTR-P-lacustris_contig102:222964..223144 1622815291.3153527-UTR-P-lacustris_contig102:222964..223144 Pleurocladia lacustris SAG_25_93 UTR P-lacustris_contig102 222965..223144 + 1693493454.9127998-UTR-P-lacustris_contig102:222964..223144 1693493454.9127998-UTR-P-lacustris_contig102:222964..223144 Pleurocladia lacustris SAG_25_93 UTR P-lacustris_contig102 222965..223144 + 1622815291.4644434-UTR-P-lacustris_contig102:231657..232784 1622815291.4644434-UTR-P-lacustris_contig102:231657..232784 Pleurocladia lacustris SAG_25_93 UTR P-lacustris_contig102 231658..232784 + 1693493455.0220711-UTR-P-lacustris_contig102:231657..232784 1693493455.0220711-UTR-P-lacustris_contig102:231657..232784 Pleurocladia lacustris SAG_25_93 UTR P-lacustris_contig102 231658..232784 +
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622815291.325533-CDS-P-lacustris_contig102:223144..224545 1622815291.325533-CDS-P-lacustris_contig102:223144..224545 Pleurocladia lacustris SAG_25_93 CDS P-lacustris_contig102 223145..224545 + 1693493454.9277685-CDS-P-lacustris_contig102:223144..224545 1693493454.9277685-CDS-P-lacustris_contig102:223144..224545 Pleurocladia lacustris SAG_25_93 CDS P-lacustris_contig102 223145..224545 + 1622815291.337238-CDS-P-lacustris_contig102:225041..225209 1622815291.337238-CDS-P-lacustris_contig102:225041..225209 Pleurocladia lacustris SAG_25_93 CDS P-lacustris_contig102 225042..225209 + 1693493454.9354436-CDS-P-lacustris_contig102:225041..225209 1693493454.9354436-CDS-P-lacustris_contig102:225041..225209 Pleurocladia lacustris SAG_25_93 CDS P-lacustris_contig102 225042..225209 + 1622815291.3501873-CDS-P-lacustris_contig102:225692..225773 1622815291.3501873-CDS-P-lacustris_contig102:225692..225773 Pleurocladia lacustris SAG_25_93 CDS P-lacustris_contig102 225693..225773 + 1693493454.9470959-CDS-P-lacustris_contig102:225692..225773 1693493454.9470959-CDS-P-lacustris_contig102:225692..225773 Pleurocladia lacustris SAG_25_93 CDS P-lacustris_contig102 225693..225773 + 1622815291.3599236-CDS-P-lacustris_contig102:226458..226651 1622815291.3599236-CDS-P-lacustris_contig102:226458..226651 Pleurocladia lacustris SAG_25_93 CDS P-lacustris_contig102 226459..226651 + 1693493454.954941-CDS-P-lacustris_contig102:226458..226651 1693493454.954941-CDS-P-lacustris_contig102:226458..226651 Pleurocladia lacustris SAG_25_93 CDS P-lacustris_contig102 226459..226651 + 1622815291.3690183-CDS-P-lacustris_contig102:227079..227158 1622815291.3690183-CDS-P-lacustris_contig102:227079..227158 Pleurocladia lacustris SAG_25_93 CDS P-lacustris_contig102 227080..227158 + 1693493454.9668047-CDS-P-lacustris_contig102:227079..227158 1693493454.9668047-CDS-P-lacustris_contig102:227079..227158 Pleurocladia lacustris SAG_25_93 CDS P-lacustris_contig102 227080..227158 + 1622815291.3781924-CDS-P-lacustris_contig102:227519..227634 1622815291.3781924-CDS-P-lacustris_contig102:227519..227634 Pleurocladia lacustris SAG_25_93 CDS P-lacustris_contig102 227520..227634 + 1693493454.9761126-CDS-P-lacustris_contig102:227519..227634 1693493454.9761126-CDS-P-lacustris_contig102:227519..227634 Pleurocladia lacustris SAG_25_93 CDS P-lacustris_contig102 227520..227634 + 1622815291.3872175-CDS-P-lacustris_contig102:228407..228522 1622815291.3872175-CDS-P-lacustris_contig102:228407..228522 Pleurocladia lacustris SAG_25_93 CDS P-lacustris_contig102 228408..228522 + 1693493454.9850717-CDS-P-lacustris_contig102:228407..228522 1693493454.9850717-CDS-P-lacustris_contig102:228407..228522 Pleurocladia lacustris SAG_25_93 CDS P-lacustris_contig102 228408..228522 + 1622815291.434147-CDS-P-lacustris_contig102:229235..229320 1622815291.434147-CDS-P-lacustris_contig102:229235..229320 Pleurocladia lacustris SAG_25_93 CDS P-lacustris_contig102 229236..229320 + 1693493454.9936697-CDS-P-lacustris_contig102:229235..229320 1693493454.9936697-CDS-P-lacustris_contig102:229235..229320 Pleurocladia lacustris SAG_25_93 CDS P-lacustris_contig102 229236..229320 + 1622815291.4434056-CDS-P-lacustris_contig102:230403..230476 1622815291.4434056-CDS-P-lacustris_contig102:230403..230476 Pleurocladia lacustris SAG_25_93 CDS P-lacustris_contig102 230404..230476 + 1693493455.0033176-CDS-P-lacustris_contig102:230403..230476 1693493455.0033176-CDS-P-lacustris_contig102:230403..230476 Pleurocladia lacustris SAG_25_93 CDS P-lacustris_contig102 230404..230476 + 1622815291.4524636-CDS-P-lacustris_contig102:231498..231657 1622815291.4524636-CDS-P-lacustris_contig102:231498..231657 Pleurocladia lacustris SAG_25_93 CDS P-lacustris_contig102 231499..231657 + 1693493455.0127518-CDS-P-lacustris_contig102:231498..231657 1693493455.0127518-CDS-P-lacustris_contig102:231498..231657 Pleurocladia lacustris SAG_25_93 CDS P-lacustris_contig102 231499..231657 +
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-lacustris_contig102.281.1
>prot_P-lacustris_contig102.281.1 ID=prot_P-lacustris_contig102.281.1|Name=mRNA_P-lacustris_contig102.281.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=823bp
MMSDSDGGDGDEGKDALVSAAYPKSKPPPRKKRAVASVMRKKGPKAASSP back to top mRNA from alignment at P-lacustris_contig102:222177..232784+
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-lacustris_contig102.281.1 ID=mRNA_P-lacustris_contig102.281.1|Name=mRNA_P-lacustris_contig102.281.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=10608bp|location=Sequence derived from alignment at P-lacustris_contig102:222177..232784+ (Pleurocladia lacustris SAG_25_93)CACCGAGCTCGGAACTGGCCTCGCCTTCCGCAGCAGCAACAGGCAAAGCG
GAAGAAGCTCTGGAAGAGGAAAGGACGCGGCGAGGGGG GTACGTGGTGTT
CACTACACGATACGAAGAGCCGTAGCAGTAATGACAAGTGTCACCAACAG
CAGGAGAAGGCAGGCCGCACCAACGTCGCCAACATCGGAGGCGCACGCGT
CGATTCCGAGAAAACACAGGAGACACCTACGTAGGTCGGCTTCTCTTGCG
CCTCGGTAGGCGCGTCTTCACAAGGTCCTACAGTCGCGGCCTTCTCCGGA
TCCGAGAGATCCTGCAGGCCCGTACGCGCGCTCAGTCCCTGAACATCATC
GAGCTTGTGTATTGGAATCGCAGTACTAGCGTCTACCGGCGTCAGCCTCT
ATACACCGACTGCCGGTGTACCCAAGACGGGAGTTCCCATAAATGGAATA
CGCGTAATTTGTCGGGTGTTTTTGTTTGCGTCGCACATGGGTCCGCAACA
CCCCGTACGACAGCCTCGGCTGACTTCATATATATTGTCGGTACCCCTTC
CTCGCCGCCGTCAAATAACGGACGACACCGACTTTAGGCACGAACCCGTT
TGTGCTCCCGCCTCCGGCTAAGCGGGGCCCATTTTCAGCTGACGCCGTTG
AACCTTGATGGTTGCATTACTTTCCGTCCGCGTTGCCCCCCGTCGCGTTC
GCGGTTTTTGCTGGTGTACCATCTTTTCCCAGCAGTTGCCCCCCGTCGCG
TTCGCTGTTTTTGCTGGTGTACCATCTTTTCCCAGCAGACGCCGACATCG
TCTCCAGCGCCGGCACGCGCGGGGCGCGCACGCTCCCCCTCGTCCCTCGC
CTCCGCGAAGGATAAGGCCAAGGCGCCGGCAAGCTCTCCCGCCCTTTCCG
CCGGCCGAGGGAGCGGCGAAGGAGGGTGGAGCGCCAAGGACGATGGCCTG
GACGACTTCGCTTTCGAC ATGATGAGCGACTCTGATGGCGGCGACGGTGA
TGAGGGCAAGGATGCCCTGGTGAGTGCTGCCTACCCCAAATCGAAACCGC
CACCGAGGAAGAAACGCGCCGTCGCTAGCGTGATGAGGAAGAAGGGGCCG
AAAGCGGCCTCTTCTCCGGGCGGGACTGGAACCAGCGGCAGTGCCGGTGG
CGGCGGCAGTGGCGGTGGTACCAACGGCGCTAGAGTCACCGATGGCACAC
CCGCCGCCCAGAGAAAACCAGGGGCGCCTCCGTCGAGTCGCAGGGGCAAC
GCCTCCATGACAACAAAAACGACAACGGCTGAGAAAAGGAGCGCAGCTTC
AGCCGCCGCAGCTTCTTCCGCATCGGGAGATTCCGGATCGCCCGTTCCTG
GTGATGGCGCCGAAAGAGTCGAGAAAGTGCCGAAAAGCGCTGCTGCTAAG
GGTAAGGCTAAGTCTAAGGCTAAGGCTGACCCCAAGGCTACGTCTTCCGC
GGCGTCACAGGAGGAGGTGATCGACGTCCGAGACGAGGGTGACGAGAAAG
GAGAGAACGGCAGCAATGACAGCGATAATGACGGCGACGGCGGCGGTGGC
AATAGTGATAATAGTGATGGTCCTGGCCGGAAGCAGGGGTTTGGTAGCAC
CGCCGCGAAAAAGAGCGCGGGTGGTGGCGAGGGCAGTAGGCGGGGAAGCG
TCGGCGGCACGAAGAAGAGCGGCACGGAGGGCAAAGGGACCAAGCAACCG
GCTTCCGCTGCGGCTGCACCGGCTTCAGCTCCGGCCTCGGCCCGTAAGAA
GCGTGCAAGCCCTCGGCCTTCGCCCTCTGTCGGCGGGATCGCCGGCGGCG
ACGATGGAGTTGGGGAGAAAGGTAAGGCCGAGGCGGGGGCGGCAGCAGCG
CGGGCGTCTAGCAAGGGGGCTCCGCGCACAGACTCCGACGAGGACGCGCT
TCCCCCCAACGACGAGGACAACAGCGGCGGTGGCAGAGTGCTCACCGTCG
GAGGAAAGGGCTCGGACGTCGACTTAACCGAAGAAGACGACGACGACTCC
CCCGCAGAAGCAGCAGCAGAAGCAAAGTCGTCCTCGTCAAAGAAACAAAA
AAATAAAAGCACCGCTGGAGGTACAATGGCGGCGGCGGCGGCGGCTCCGT
CGGGGGTAGGAGATGGCAAACAGGCGGGAGGGGGACGCGGGAAGGGGAAA
GGGAAGGCCAAGGCAGGAGTAGGGAGCGCCGCCATGTCTTCCGCCAAGCC
GGCTAAGCTTGCTGAGGACGTAGAGGTCGTTCTGCGGAGATTGCGCAAGC
TAAGGGGGGAGATGGCTCGCGGCGGCGGCGGTGGCGGTAGCAGCGGCGGC
GGCGGCGATGGCGGCGGGAAGAAGCCTCCGACCTTGCTGGAGCTTGGCCT
CAGTGGTGACGTCACGGAG GTACGGTAGGGCGGGCCTTCGCAGTGGTCAG
CACACGCGGTTGTTGCTCGGAAGCCGCTGACTTTGAGTGAGGCTCGCATT
GTGGTTGTTCTGGGGAGATGCCAGCGTCTGCTGCAGGCTTTGATTGGTTA
CGTGGAGAGCTCTTAGAACGGGTCCCGCGTGTTGTGCTCGAGCTACTGCA
ATTTCAGCGCAACGCACAGTCGAGCCTCGGCACCAGATCCTCTGCTCTGC
GCGTTACATGTTATGGACTGCATTAGTTCTCGCACCTTGCACACACATGG
GTGCCACCTCGTTTCACGCTGCGTGTGTATGCGGGAAAATTTGTACGGGT
TTAGCCAATGACCGCGGGAATTTGTTCCTTAACCATTGGATTAGCACGGA
AAATTGTTTCTTACACATTCGGTTCGTGCGGACGAGAGAGGTGCGAGGTT
TTAGTGTATGAAAACAACAAGAACAGACCGACCTACTGCTGTCTGCTATT
TTTCATCGACGTCAGGTCCAGGAAATGGGTGCGGCGGGTGTGATGGACGA
GATCGAGCGGATCGCGGTGGAAACGGCCCTCAGCATCATGGAAGGGAAGG
GCTTCGGCTTCAGGGTGCCCACCCGAAGCAGCGGCAACCAGAAGTACGTG
GAGGAGCTGGATCGAATCGTCCTCGGCGACAAG GCGAGAAAACGAAAAAA
GCACCCCAAAAAAACACCCATGCACACGCCGACCCATGCCCTCGTAGTGG
AGGATGTGGGCCCCGTGTGCCTAGAGCGAGCCTAAGCTTTTTCGAGAAAA
TGACACAAAGCATCAAAGGAGGACTGCCATCTCAGAAGTGCCCTGCGTGA
GATTTGTGTCCAAGTCTTCACAGTGACGGTTAAAATGGCCCCTGCCGCCT
ATTTGACTTTGTTTCATGTACGAAAGCTTTTTTGCGTTTTTTTCATCTTG
TCCCACTTGCGTGCCGTTTGTGTTCTGGACCGTTAAGTGACGGTGCTTTA
GCGTGTTATTTCGTGCTGAGACATGGTTCGTTGGTGATATGTTTGCTGCT
GTTGTCTGCTCCGTCTGGTCGCTTTGAGTTCGTGGCCGATGGTCCGCCCG
GGTTCCTTTGTGTGTCCGGTGGCTCATGGTCCCTCGCCGAACGCCAACTT
TTACTTTTCGAGCCAGGTGTCATTCCGAAACTTCGTTTCGACCGCTATGG
CAAGGAAGACAGCCATCACCACCCGAGTTATCCAGCTCGTGCATCAG GTA
AGTTATGCATGTGATGTTCGCTAGACCTTGCCCACACGTGATGTTTGCTA
GACCTTGCCAACACTCACACGACTAAAGGTAGGTGTTGTGACACAATGAC
ACCCACTGGGCGGGGCGGACATGCATGACCTATTGCCGGGTCGACTGTGT
CCAAGAACCGGCCGGAGTTGGACGAATATAGGCTCTTCCGACAGGTGCCT
TTCGTCCAAGTTTACATGTGTGCTCCCTCAAGTAACAAACACACACGCAG
GCGCACGCATGCACGCCGAGGGTGTTTCTTGTGCGTTCGTCTGGCTTGTA
CCCGCGGGCTAGATGTTGGGCGAGGAGTGAACGTGAGAAACATTTGCAGC
AAACACGTATCGTGGTACACAAAGATGATAGGGTAAAAGATGCAGACCGA
CGCCCTTGGCGAGGGCATCCGAGGACCAGTCCGAGGACCAGTCCGAGAAC
GACAACGGGATTGAAAAAAAATCAGGTCATGTCAAGCAGGGTGATTTTCA
AAGTTGTTCAATGCGTTCGCTCCGTCACGCAATCGCACCACATTCACGCG
CGCAAACACATGAAACACGGTACAACCAACGTGATGATCCATCCAATACG
GAATGGCGTACAACAAACGGAATGATCCAAAACCATACGGCAATTTTCGG
TACAACAATCGAAATGATAAACCAATCATAAGGTCCTGGGCAAAGGCATC
CACATCACGAAACGAGATATGTTCTACACCGACGTGAAGCTGTTCAAGGA
CCAGTCCGAGAGCGACCACGTACTGGACGACGTGGCGTGCATGATCGGCT
GCACCCGCTCATGCTTGAACGTGGTTGCCTCGGACAAGGGCCTCGTGGTA
GGACGGGTGACATTCATGGAAGACG GTGAGACGGTACCTGAATCGTTCAT
ATTTACTGACGAACGTTTATGGACGGTGTTGTTCCCTATGGTGCATTCTG
TCGTCAAGAGTTTCCACCACGGATTGTTTTGGATCTCGCGAGCGCTAAAG
GCCGAGCGCTAAAGGCCATGCCTAGACATGGGTGGCCTCCGAGGAGGCAT
TCGTGTTGAGACCGTTTGAGGTTCTTGGACACGGCGAGGGGAAAAGGCAT
TTCTTTCATTGGTGTGGATGTGTTGACGATGGTGATATCTTGGAAAATGT
TGTTGTCAAGGGTTAGTCATCCTTGCGCATACACTATCATTCCCACTCGC
GCCTAAGCACGATGACGTCGACACTGATTGCTGTTGATGATGAAGTTGAT
GCCACAGTGACAAGTTCTTACTCCAACGCCCCACATCTGTGATCCAACGC
CAGGCGACCTGATCGACTGTACACGTATGGGCGTAGGTGGAAAGGCCATC
CCTCCCTACATCGACAAGATCACCGATATAAG GTTGTTGCACGTCACCAT
GTGGGCATGTCGGCACGATTGAATTCGTACCAAGGGTATCGGTGTTGTGT
TGTTGTTGTTGTTGTTGTTGCTGTTGTTGTTGTTGCTGTTGTTGTTGTTG
TTGTTGCTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTT
GTCAAGGACTGCACATCTGGGCTAGCACTAGGCCGTACTTTCTTTATCTG
TTTTTTTTTACTCCTCGGTAGCGATGAGACCCGAGCGTTTTCTTGTTGAT
GGACACAGAGAAGCCGTCCGTATGCAGCGCACTTGTGCTTTCGAAGCTTG
TTGCTCACTCTTTTGAGGTTTTATGTCCTATTTTGACTATCAGGAGCGAC
GCAGACTTCATCCTGTTGGTGGAGAAGGAGGCTGCCTACATGCGAATGGC
AGAGGACAGGTTTTACCAGAAGTACCCCTGCATCGTCATCACGGCCAAGG
GCCAGCCG GTGAGAAAATGTTGATGTTGTCATCCAGGATTTGCTAGTGGG
AAGATGATTGATTTGGTGAAGACGCACGGCGCCGGCGTCACAAAAAAAAG
GCCAAGGGTCAGGCGGCGACAAGTCTCGCACAACAGGCGCTATTGTCGTC
CGACTGGCGTGTAGGGCAAAGGTTCGTAACGGCGATAGCGATTGCATCGT
GTGTTGAGGTTTGGTCAAGGCAGAACTTGGTGTGAGGCCAGCAGGATGAG
GAGATCTTTACCAAAGCCGTCTTAGTTTCGGTCAACTCGGGGGCAGGCAG
GCAGGGCAGGGCAAGGGTTACCTGTATATGTTGTTGTTGGGGACGGAACA
TTATCCATGCTGATGCTAAAATGATATGAAACGACTCGCGGCGGTCACGG
CACGTACAGCTATCAAGGGCTCGTTTCCAACGTTGTATGGCGAATATGTG
GTGTGGAAACGCATATCCATCAGGATGCGCGTGGGTGGACCGGTCTGTTT
CTCGAGCGCCCGCTGAGAGCTGCTCCCCCCCGCCCGGCAGTTCATTCCGC
ATACACCTTCTGTCGTCGCATCCGCTTCTGTTGTGATCAAGTACGTTTAT
GTGAGAACATGTCGACCCCCCCTCTCGAAGCGCATCCGAGAGAGCGGAAA
GGTCCGTGTTTCTCGCGTTTTTTGTTCATTTTTTGGCGCTTTGTTTACCT
TTCCAATCCCGCTAGTCCAGTCAACACTAACACGCTTTGTCTGGCCACTC
CGTGACTGGTGCACTTCCACACGCTCTTCAGGACGTGGCGACCCGCCTCT
TCCTGAAGCGGCTGAAGCGAGAACTGAACATCCCGGTCATGGGCCTCGTT
GACAGCGACCCTTACGGCCTTAAGATCCTCTCCGTGTACATGAGCG GTGA
GAAACTAGTCAAAAATTCGATTGAGCATTCCGCGCCAGCACACTCGGTAG
AGCTGCCATGTCTTGCTTGGCGTTGCCCGTTCTTTGGGCCTTTCTTTGTG
ATAGGAGAGGGAACATTGCTAGGCGTGATTAGTTTCCCAGCAGCTGCGAT
TTGATTTTGATTTGTACATAACCGTGGACATCGGGCCCCAAAATGGCACT
CCTAGATATACTTCGTGTGCATGAACTGGTCGGCAGACGTGGGGCGAACA
CTTGTGTCCTGGAGTCCTTGTGGGTAGTCCGTGTCGAAGCCAACGGTGGC
CATACTCTCGATGTTTTCTTGATATCTTGTCTTGAATGGTCGCACTTACC
AAAGCTTGATGGGTAGGTTGTGGAAAGCCACAAACCTGCTGTCGCTACTC
TGCTAGAAACCACAACACAAGCAATTGACGCACACGCGGTACACGCCTCT
TTCCTTTTTCCTATCTCGGCTTATCCCATTCTCCACTCTTCCTTCCGTTT
CCACCTTTTCCGCAAAGGGTCGCCCTTGCCTAGCCGAACAGCTTCCATCC
TCGTTGGCGCACGGCGGAGTGTGTTATCCTGCGGTGGATGGGGCGCCTTG
ATGTCAAATCTTTGTATTTTGGTGCGAAGAGAAAGGCACGATATCGCACA
AACCCAAAGCCGTGCCCCCTTCACCACGTCTCCTTTCCTCATTTCGTTCT
TTCCCCAAGGCTCGAAGAACATGTCTTACGACAGTGCCAGCCTCACCACT
CCCGACATCAAGTGGCTGGGTGTACGACCCTCCGACTTGGACAG GTATTG
GAGCGGTGTGACGTGCTAGTTAGCAACCATTTCCTGCAGTACATGTTCTC
GACGAAGGGCTGCACTGCTGTATTTTCTTCATGCGGCAAAATCGTATACG
TCAGAGCTTGAAGGCCTGAGAATGGTTGGCTATTCGGTGCATCACTCTAG
GAGATGTGAAATTTGTCCAAGCAGGCGACATGCACGGTGTTTGGATGTAT
GCCAATGCAAACCATGTTCTGTTGGAAGGCAACGGACAAGTGCACGCAGC
TGGTTTCTCTTTGACAAAATGCTTGTTGGTGCAGTGTGTGAAAGATGTGT
ATCGTTCTAGTAGAGATGTGGGTCGGTATCATATCCCCTAGGTACACCGT
CTTTGTGTAATTGTTCCACATCAAGCGAACAAGTTTCTCATTCTCACGCA
AGTGCGTGATTTTGTGTATCTGATTGATCGATTCCCGCGAGTCCTAGAAT
TCCATGTACGTACCGTAATGACGAAATGTGCAAAAAGTAGAAAGCCGCTG
TGCACCCATTGCGAATCGCACACCTAGCATATACACTGTTTTTCCCTGCG
CTGCTGTTGCTGCTGCTACTGCTGCTACTGCTGCTGCTGTTGCTGTTGTT
GTTGTTGTTGTTGTTGTTGTTTCTTCACATTCAGCACCCGTCTCGACTTC
TTTCTCGACTCCCTCATAAATTCGAATCCACTGCTGGGAAAAATAGATAA
TGCTTTTACAAAATAGCTCAAATATTAAGCATACACCATGGATTTGAATA
TGTGGATAGATATTGTGCCTATGGGACAGGAAGCAAGGCAAGCGCATCGA
AGCAGGAGCGCGTTTGAAGGGTACATCAGAGGATATATTGTGTAGGTCAG
AACGTAGAACGTTCTTTTTTGTGAGTACAAAACAGTGAGACGAGTTTCAA
GCTACGTAGGTGCGCCAGAAGATTGGAAGGAAACGCCCCACCAAATCTCT
GAGGCATACTGTAGCACACACTCTCAGCAAGACCAAGCGTTCATGTGTGA
CCAAAGATGAAAAACAGGTATGTCGAAACAAAGGCACAACGATGAAAACA
AGGTACCCCTCCGATTGTCGAAAAAAGGTACAACATCCCGGAGCAGTGCC
GCCTGGACATGACGGAGCATGACATCAAAACCGGGAAGGAGCTACTGCAG
GTACTGGTTTCCCAATCTCCAGTTTTTTGCTGCTTCGTTCGCCTTCCGAT
TACGAACGTCTCCATGATCACGCGCGGGTGTGAAGTGACTGTCTCATGGT
TCCATCTGGATTTCCACTCAAAATTAAAAATTCCGCGGAAGTTGCGTCGG
CCTGTGTTTTGAAGTACATAGCATGTCTTCGTTTTTATGTGCCACTAATG
TGTCGGATGTCTGGGCGGTGGGGCATGGCATCGAGAGGTGGTGACAAGGT
GCCACAGGCAGTAAGTGAGCTTATGATGAGCTCCTACGTTGGCGCGTTTC
AAGAGTCTCCATCTCGTAGCTTGGCGTCCTCACTGTCCAGCCGGTATCCC
TGTGTCGGTAATTACCTACGGTCGGCTCGCTTCTTGCGCTTTTGATGACA
TGCCGTCCGGGTGCCCAGGCAATGTCTGGCGGGGCGTACAGAATAGGCAC
CTTGGCACACAAGTGGAAAACGTCTGCTCTGTTTTGTTCGTTTTTGGATA
CTCTTGTCTCCATGCGGACACACGGGGCGCTTACGCCTCGGAGTTGTTTG
TGGAAGTTTCACCACACATAGGTTGAGCTCCCGCACGTGTGGAGGCGTTT
GCCTCTTTTTGGAGTAGGACCAGTGCCTTGCCTTCAAAGGGTCTGAGTGT
CGCATGGCCATTTGACTGAGGTAGGCATCAAGTGAGTACGCCCTGCCCCT
CCCTCTCCCTCCCGTCCTGTTCAACTGTCGGGGGAGGTGTTGGACATGAC
ACTTCGCTCTATTTAAAAATAAAATGTAATTTCAAAAAGGACTATATTAC
CATTTGGCAAGTCCCCCGCACATGGCTGTTGAAATTCATAGTCTTTACAG
TGAGGGTTTATTTGACGCCTCATGCCTACTGACTTCTTTGTATGTGGTAA
AGTCTCAACACTGTGCGGCCTATGCAGCGACCCCGGTGGCGAACAACATG
ATTTTTTTCGGTTCAAAACAAAAAAAGAGGTTGTAACGTGGTTGTCTCTT
TGGATGCAAACAAAATGGACAGGAGGATTTCATCAAGAAGAACGAGCCAT
GGTGCCGCGAGCTGGAGCTAATGATAAAGTCCAAGAAGAAGGCAGAGATC
CAGTCTCTCTCGGCCTTCGGCTTCCAGTACCTCACTCACACCTACCTGCC
TCAAAAGCTGCAGAACGGAGATTGGGTTTAA CGATCACTCAAGCCATGTT
TTCACCCGTGTCGCCTGCTATGGTGTGGCGACAGGGTAGCCTCGTTTGCA
GTTGGAGGTATTGCTCTGGCGCGGGCATTGTTTTGTGGCGGTGAGGTTCG
CGAGGTCGTGAAAGGTGTGTCGGCCCCTCATTCCGTACCAAAAACATTTT
CACCCACAACAGCGGCAGAAGGGGCACTGGACTTGAAAGCTATCGGACGC
GGAAGCTTGCTGATTTGTGAGGGCCGTTTGATTGTTGGCTTGATATGGTT
TGGTGAGGCTGCCCCGGAAGCTAGCCGTGGGCTTCTGTGTATGTAGCGGA
AGCTACGAGCTTCGATGTATGAAGCAATCCCGACTTGAGTTGTGCAGCCT
TTCTTCATATTGTGACGATGAGCGAGTGCGTATGGCGCGATTGGGGTCAT
TTCGTTGGCGGGAACTATGCCACGACGCTCCGTGATTTTCTCGCGACGCT
ATGCATGGCATCTGTTCATGTGTTGCGCTATCGCGCATGTTGGAATTCAT
TCTGAGGCCCTTTAGGGTTTCAGTTTCTGTTGCGGCTAAAAAAATCCCAC
TAAATAATCTTGACCCCTTCCCAGTTCTCTCTCCACACTGAAGCTACAGC
CACGCCCCGCCGGCGATGCCTCCGCACACACCCACAGGTCGTGCGGATCG
ACGGCAGCCCTCTCCAATCGCTGAGCTCCATGCGGGGGTGCGCCATCTCT
GAAAGACTCAAAATCTCTTCTCTAAAATCAAGCGATTTTCAGAAAACTGT
TGTTTGGTCGCTGATTTCTGATTGGTTCCGAATTGGACAAATAATAGCCC
GGGGGTGCCCCGGCCTCAACTGGAGCCCAATTTTGTTTTGGATGGAAGTG
TTACCCCGCCACAGTGGGGTGTGCATGTCACGTAAGCACGCATGCATGCG
AAAAACACCGTTGAGCGACGGCGAGTTCGGCGGCGGCAACGACGAGTGTG
CGAGGCAGATGGGGAAGCATAAAGCGAAGGAGATGGTCTGCATTTTTTTT
TCATGTTTGTGTGTTTGGATCCCTCTATTGTTGTGGTGTCGGCGTAGGCC
TGGAGAGGATATAGTTATTGTAAGCATGCGGCAAGCATAATATATTTATG
AAGAATGG back to top Coding sequence (CDS) from alignment at P-lacustris_contig102:222177..232784+
>mRNA_P-lacustris_contig102.281.1 ID=mRNA_P-lacustris_contig102.281.1|Name=mRNA_P-lacustris_contig102.281.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=4938bp|location=Sequence derived from alignment at P-lacustris_contig102:222177..232784+ (Pleurocladia lacustris SAG_25_93) back to top