Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 253 |
| Cds size | 252 |
| Stop | 0 |
| Start | 1 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815285.38246-CDS-P-lacustris_contig1015:16346..16541 | 1622815285.38246-CDS-P-lacustris_contig1015:16346..16541 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig1015 16347..16541 - |
| 1693493451.096806-CDS-P-lacustris_contig1015:16346..16541 | 1693493451.096806-CDS-P-lacustris_contig1015:16346..16541 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig1015 16347..16541 - |
| 1622815285.391421-CDS-P-lacustris_contig1015:17050..17107 | 1622815285.391421-CDS-P-lacustris_contig1015:17050..17107 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig1015 17051..17107 - |
| 1693493451.10621-CDS-P-lacustris_contig1015:17050..17107 | 1693493451.10621-CDS-P-lacustris_contig1015:17050..17107 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig1015 17051..17107 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-lacustris_contig1015.234.1 >prot_P-lacustris_contig1015.234.1 ID=prot_P-lacustris_contig1015.234.1|Name=mRNA_P-lacustris_contig1015.234.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=84bp
MARVHPRLEKERLLQHQNMVKQRLDEGLSGGEAFKFLLRLVATHFDYEDR
GDALTKLNGFFVPTGTQFGEFLRQFRTAVTNITH back to topmRNA from alignment at P-lacustris_contig1015:16347..17107- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-lacustris_contig1015.234.1 ID=mRNA_P-lacustris_contig1015.234.1|Name=mRNA_P-lacustris_contig1015.234.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=761bp|location=Sequence derived from alignment at P-lacustris_contig1015:16347..17107- (Pleurocladia lacustris SAG_25_93)
ATGGCGAGAGTGCATCCGCGTCTGGAGAAGGAGAGGCTTCTCCAACATCA
GAACATGGTGAGACCATGTCCAGATTGATGAGCTCTCTTTGTTCCCCCCG
TCCCAAGCCTCGTAGGGTTCCCCTTTTGTCTTCCGTGGCAGACTCCAACC
GTGGTTGGATGTCGCGCAACAGTGTGTCGGTAGTACACAATGGTCTCCCC
TTTCGTCCCAGTTGGCTCGCACGCGTCAAGCAGAGTTGGAAGAGGCAGCG
AAGTTGGTCGAGATAGCTCGCGTTCGAGATATCGCCACCAACTACACGAA
AACCAAGTTGCGTGAGATTAAAATCCACCCCCGCATGCCATGGCAGCCAA
GCCTTAAGAACGCGGTGCCACAGCTCCTGAGACTCCATCTCTGCCGCGGT
CCTCGACATTTTGCAGCAAGCAGATCCGTTTATCGTGTTCGAGGACTCGG
ATAGTTGGTGTCGAGGATGGGAAAATCCTTTAAGGAAGGCGATGATTTCA
GCGGTTGTCACAGAGAAAGACACGACCGGAGAACTGATTTCCTCAATTAA
CGACATGTTCACGCAGGTGAAGCAGAGGCTGGATGAGGGCTTGAGCGGTG
GCGAAGCCTTCAAGTTCCTCCTGCGGCTGGTGGCGACACATTTCGACTAC
GAGGATCGAGGCGATGCCTTGACAAAGTTGAATGGTTTTTTTGTGCCCAC
GGGAACGCAATTCGGAGAATTTTTGCGGCAGTTCAGAACGGCGGTGACAA
ACATCACCCAC back to topCoding sequence (CDS) from alignment at P-lacustris_contig1015:16347..17107- >mRNA_P-lacustris_contig1015.234.1 ID=mRNA_P-lacustris_contig1015.234.1|Name=mRNA_P-lacustris_contig1015.234.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=504bp|location=Sequence derived from alignment at P-lacustris_contig1015:16347..17107- (Pleurocladia lacustris SAG_25_93)
ATGGCGAGAGTGCATCCGCGTCTGGAGAAGGAGAGGCTTCTCCAACATCA
GAACATGATGGCGAGAGTGCATCCGCGTCTGGAGAAGGAGAGGCTTCTCC
AACATCAGAACATGGTGAAGCAGAGGCTGGATGAGGGCTTGAGCGGTGGC
GAAGCCTTCAAGTTCCTCCTGCGGCTGGTGGCGACACATTTCGACTACGA
GGATCGAGGCGATGCCTTGACAAAGTTGAATGGTTTTTTTGTGCCCACGG
GAACGCAATTCGGAGAATTTTTGCGGCAGTTCAGAACGGCGGTGACAAAC
ATCACCCACGTGAAGCAGAGGCTGGATGAGGGCTTGAGCGGTGGCGAAGC
CTTCAAGTTCCTCCTGCGGCTGGTGGCGACACATTTCGACTACGAGGATC
GAGGCGATGCCTTGACAAAGTTGAATGGTTTTTTTGTGCCCACGGGAACG
CAATTCGGAGAATTTTTGCGGCAGTTCAGAACGGCGGTGACAAACATCAC
CCAC back to top
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