mRNA_P-lacustris_contig1014.230.1 (mRNA) Pleurocladia lacustris SAG_25_93

You are viewing an mRNA, more information available on the corresponding polypeptide page

Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-lacustris_contig1014.230.1

>prot_P-lacustris_contig1014.230.1 ID=prot_P-lacustris_contig1014.230.1|Name=mRNA_P-lacustris_contig1014.230.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=482bp
MPRLAFLTSGCAVFLTLSWVIVAFHQTIQDEFPARTAAGRGAKADVAQAG
MLDARNPWEEGRDGRKGEPQGDGKPMAPAKRKAGVRGITADRKNVVETLE
MDDLRAPPGRLWIPAAISGPVVHTSTKDPLFNVLVAYCQLDMAAYHESPW
LFAMGPFHQRTSGCLDDASLTRTYRLSSLKRILEENPSEFMDPTGFIYHE
TRCGSTLSANMIASVPSNIVHRCDEGGSAPRGLREELVRTVFRLMGPVQN
GHTNLFFKFQSSKFVAAIEAAWPETKWIYLFRDPLEVMASNLKGAWRKQV
TPPRNPARNITLPEYNLGGPCVRGVKGPKTPGAKPKPPGAELLVTSCAKH
LETLNEVALKQIENGSPNGLAVEYRHLPEVMTEYVYPEHFGMATTEAERS
EFKSWMEPVTHMYSKGMATVVEPGVSKEYEQGMDLEVKEEGSDPRMRAAA
VTMCENYRALVALQKWRKQVEGGTMGTCGVR*
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mRNA from alignment at P-lacustris_contig1014:47034..53658+

Legend: CDSpolypeptideUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-lacustris_contig1014.230.1 ID=mRNA_P-lacustris_contig1014.230.1|Name=mRNA_P-lacustris_contig1014.230.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=6625bp|location=Sequence derived from alignment at P-lacustris_contig1014:47034..53658+ (Pleurocladia lacustris SAG_25_93)
ATGCCGCGCCTAGCGTTTCTCACGTCGGGATGCGCTGTGTTCCTGACTTT AAGCTGGGTGATCGTGGCGTTTCACCAAACGATTCAGGATGAATTCCCCG CAAGAACAGCAGCCGGTCGAGGGGCTAAGGCAGACGTAGCACAAGCAGGC ATGCTCGATGCTAGGAATCCCTGGGAGGAAGGCCGCGATGGCCGTAAGGG AGAGCCCCAAGGCGATGGGAAGCCGATGGCGCCGGCCAAGAGAAAGGCGG GGGTGAGAGGCATCACAGCGGACCGAAAAAACGTTGTCGAGACGCTGGAG ATGGATGACCTACGAGCACCGCCAGGACGCCTGTGGATTCCTGCTGCAAT CTCCGGTCCCGTAGTCCATACGTCGACCAAGGACCCTCTGTTCAACGTGC TGGTGGCGTACTGCCAGCTTGACATGGCCGCCTACCACGAGAGCCCGTGG CTGTTCGCCATGGGACCGTTCCACCAACGCACCTCGGGTTGCCTCGACGA CGCAAGCTTGACCAGGACTTACCGACTCTCGTCCCTCAAGGTTGGTGCAT CAAACGCAGTTCAATCAGTGTCCCGGAGAGAGACTGTTTCTGCTTCGATG ATCTACTTGTCGACCCCTGCTCGATCAACCTCGAAGTTTCACTGACAACG TGCAAGACAGCTGCAGCAGTAGTTTAGTCTCCCATCTCTTTGTGCTGGCT GTGTGTGCATATGTGCTTGATTTGCGGAGAGATTCGCATCCATCGCCTCT TGGCCAAAAAACGAGTAGAAATGAGCAGGTGACAAGGGTGGCAGCATGAC GTGATCAAGTGGAACGACCTGCGCAAAACCGTTCCGATGGAAGATTTCAT TCGCCTCTAGAATGGGCGGGTCATGCACTCCATTATGCCATACTGCTGTA TGTATATCTATGGCGTTGCATGTGGGAACCTGGGATTGTTTGTTGTCGTG GTTTTGTGTGTAGTGTCGTATATGTCGTCGGGTGGGGTGCTTATGGTTAA TGGCAGCCACAACCCTTGATATATACTGTATAGGATATCGTGTAACTCGC CTTCAACTGCCATGGAGGACCACTATTCTCACATACTTTTCGTCCCCGGC CTGACATGTCTGTCCGCCCGCGACGTTTGTCCTCTTCGACTGCTGCTACG CCGGTCTCGTCTTGAGGTGACAGCGAATTCTGGAAGAAAACCCGAGCGAG TTCATGGATCCTACAGGCTTCATCTACCACGAGACCCGTTGCGGGTCAAC CCTCTCGGCGAACATGATCGCCTCCGTGCCTTCCAATATCGTGCACAGGT GTGACGAGGGGGTGGAAATTTCCCGTACTGCAGGACTGTCTGCCCTCTGC GCCGCGCCGCTGACTCCATTCGGTGGTTTACCCTTACGACTGACTGCGCC GTCGCTGACGCCCTTCAGGGCTCTCGGATATCATACTAGCCGTCCCTTAC GGACAACATCCGTAGCTTAGGTCGCCGAGGCACGTATGAATCATACCGAC GACTTTTCCCATCCCACCCCCGTCCCTGCCTTCCGGACTCACCCAGCGAA ACACCTCCGCCTATAGCGGCCCTGAACCTGTGCCCACCTGGAGGGAAGTG CCCCGAGGGGGTTGAGGGAGGAACTCGTGCGCACCGTGTTCCGCCTGATG GGGCCGGTCCAAAACGGGCACACCAACCTCTTTTTCAAGTTCCAGAGCTC CAAGTTCGTCGCGGCGATTGAGGCCGCGTGGCCGGAGACGAAGTGGATCT ACCTCTTCCGCGACCCGCTTGAGGTCATGGCTTCCAATTTGAAGGTATTG TGTGTGTCGAGCACCGACTTGTTTGCGTGAGGTGTGCCCCGAATGCTTGT GTGTTCGTGGGTTTGCGGAAGGCCTCGTTGTCCTTTTTGTGTATAGTTGG TGATACCTGCCGAGCAGGCACGCGGGTCTTCTCGTTTCATGGAGACGTTT TTCCAGGCGCGTGATGCTGGCGATCTTGGAGGCGACGCACGTGCGCCCAA CGAGTGTTGTCACGATATTATGGTAGCTCGAAGAAAAACCTTCAAGGAGG CCAGGGTCTGTGCGGGTGGTCACGAGCTTTGCTCGACTACTCGCTGCTTG CGATAGCTGTCCCGTAGCCGTGCAAGAGATGCAAGCCGAGGGACAAGACG TGCCGTCATGGAGGCCTTCCGTTTCGTCTTGCTTGGCTTCAGCAATCCAG TATATTAACGCGTTCGAAGACCGGCATGCAGATTCCTCCTCTACTCGGGC ACGCTCTTAGTGGCACCCACGACCGTTGCGCATTTGCGGATAGTGTGCGA CCACCCCGCCTCGCGAGGTGGTTTCCTACCAGACGTTGCTGGCGACTCTG GTTGGCGTTTGGCGGTTACAATCGCCTACGACGGAATGCAGATACAAGCA TGGTAGCATCTTCCACCACGATTCGTTCGCTTTCGTCCATTTTCCGAACC CGTTTCGCATCGTTTCCCACCTTTGTACATTCGCAGGGAGCTTGGCGAAA ACAGGTAACACCACCGCGCAATCCAGCGCGCAACATCACGCTGCCCGAGT ACAACCTCGGCGGGCCGTGCGTAAGGGGGGTCAAAGGGCCGAAGACCCCG GGGGCTAAACCTAAACCACCCGGTGCGGAACTACTAGTGACCTCTTGCGC TAAGCATCTGGAGACCTTGAACGAGGTAGCCCTGAAGCAAATCGAGAATG GCTCTCCCAATGGTTTGGCCGTGGAGTATCGGCACCTGCCAGAGGTGAGC GCGCAGAGTGGGTGCTTGGGGTGGTAGTTTTGGCTCTCACCAGCTTCCCG CTTGTTGTGGGTTTCGAAGGAAAATGAAATAAACGCTGTTTTTGCGGCTG GGGACTCGTGTCCTAGGCGTTTCGCGCGCCCGCAAAGTCGGTCGTAGGGA GAACCCTTGTGATGAAGTTCCGAGGGCTTCGTGGAGGTGCCATGGCGGTG TTGCAAATGTCGATGCCGTGAATGCATCTACGTATTTGACGACTTGTGTT TCTCCGTAGGTAAAGTGGTTGAAGGGACCCGAGGCCGAGGAATTGATTAA ACACGCTACCGCTGGCAGTTTTCTCCGTTGATATTTGGCCTATGGAGGAT CCATATCCGTTAGTGGTCTCCCGAGCTCCAACGGTGCTTCTAAAGGAAGG GTCGCTACACTCTGTATGTTCATGGATCTTACGCCCTCTTCCAAGATACC TGTTACTGGAGTGGTCTAAGCTAAGCAAACATAACTACAGAAAAAAGCGT ACCGATACGCCCGCCCGCTTCGCATAGCTTCGTTAAGATGCCTTACACGC GCCGTTCGATTCTGCGGGTGGGCGCATGGAGAGCGACAAACGCGTCGGAT GGGGGCGGCGTTACCTACTCCTTGTTATACTCGGCCCCACACGCAGATGC GTGTCATTCTGCCAAGGGCAGAACTGAATTGATTCTACGTACCGCCACCA CCACCGGGATGAGGATAGGCTTGCTCGTTCTCGCCGTCTATGACTTTTTT ACGTGGTGATTGGAAGACCATTCTAACGTCCGCTCGCCGTGCTCCCGTCC CGTTTGGGGTTCGAAAAAAATAATGAAGGTTATGACGGAGTACGTATATC CTGAGCACTTTGGCATGGCTACCACGGAGGCCGAGCGTTCCGAATTTAAA AGCTGGATGGAACCGGTGACGCACATGTACTCCAAGGGCATGGCAACCGT AGTCGAACCCGGCGTCTCAAAGGCGAGTGCTACCGCCTGCTGCTGCTGCT GCTGCTGCTGCTGCTGCTTCGTGTGGCCATATTTCTCCTGGATCGCTGTT ACAGAAGTGCATCTCTCAGCCTGCTGTCTAGTTTCTTGCACCCCCTGGGT CCTCCTTTGTATTTTGTGATGTACCCAATTTGGGGTAGTCAGCCTGTGAC CACGGAAGAGACGCGTCAGTTGGACCAGTACGGACAATAGAAGGTACTGA GCAGAAATCGGAACAGTTTTTAACGTGAAGACAACAACAACAACTCATGC GTACATTCTTCAAGATTTAGGTGGCCACACGCCAGTAAAGGATATTTGCT ATTCAAAGGCCAAGCGAACGTGCGACTTTCTGTAACTGCGGCAGACCTCT TGCCTCTTTGGGCCTAGGCCGCCGTGCTTTGCTATGTGCGACAGCTGCAG TGGGTTTTTGCTTCACGCCACATCTCTCGCTCTCTGTTTCAAAACGCCGT TCACGTTTCGTAGCCACGGGCGTGATTACTCTCTCCCGGCAAGGGCTACA ATACGATACGATACGATACAGTCATACCCTTTAGGCCCCCTTCCCACGAA AACAAACGACGGGGAAGCCTTGCCTTGTTCTGTTTTGTTTTGTCCCCCCT CTACTTCTGAGTTCGCCCCGGTGCGTTCTTTTGTCGCCTGACTTTTGTCC CCAGAAAAAAAAGTGTAAGAGACTTATTCCATCGTTGTTTTGTTGTTGCC ATCGTTGTTGTTTTTTTGCACAAAAAACCTGCCCATCGATAAAAATCGAT CACCACCCTGGTAATCCTGCGGACAAACGAGTTGCGCTGTGTTTGTATGT TGTGTCCGGGAGCATGCCCCCAAAAACGCGAGAGAGCAAAGCCACACGCC GGGGACTGTTCACCTTCACCCCCAGTTATTTTTTCTCTTTTGCGGAAGCA TTTACCCTCCCCTCCCGCTTTCGACAACACTCCGCAGCGTTTTTCCCCGC ACAAATTTCTAGTTGCCCTGTGGAGAGTTACCAAGAGATGATCCTGCGTT AGTGTATCCTGCTTCTTCTGTTCGTAGCACGTGCTCTTGAGTCGGCTTTT GGTTGCTCATTTTGTTCGTTTTGAAGTTCGCTGCTGTGCTAGTAGTGCAG CGAGGAACCATCCGCGTGGTAGCCCTACAGTAGGACAAAAGCACTTTCCT CGGTGTTGTACTGACTGCGCGTGATGAGCCAATCCCTTAATAACCATGTT ATTGGTCATGCTCCCGAGCCCTGTTGTTTGGGCATCTCTTGTGGCACAAC CTTTGCATCTACTATGAGGAACATTTTTTGCGTTGCCCATGCGATCTGAC AGTTGTCAGCGTCTCCAAACGGGGTGGATCTTTTTCCTTGAATTCTCCAG TTTGTGCCTGAAATTTCGTTTCCCTCGGCGTATCTTCACACACACACACA AAAAAAAGAAGAAGGTGCGCCACTCTTCATTATTGGCAGCACGGCGCTGC GATCGCCCACTGAAATATATCTTTTACGCCAATATTTTCCCGTCGGTGGC CGATGGCCCAACGCTGAAACAAACTCCTTGCTTCAGGAGTACGAGCAAGG GATGGACCTCGAGGTGAAAGAGGAGGGCAGCGATCCGCGCATGCGAGCAG CGGCTGTCACCATGTGCGAGAACTACCGCGCTCTCGTCGCGCTGCAGAAG TGGCGCAAGCAAGTGGAAGGTGGCACCATGGGCACGTGTGGCGTCAGATG ACGCCCTTTGCAAGGCATTCATTCCGACTCGACACGACGAGCAATGCTGC TTGGGGCAGATGATGCCGTCTCCAAGGCTTCGCGCTCGATACGATGAGAG GGAGTGAGTGCGGCGTGGGAGGCCAGTGGCTCTCTGTAGGTGGCTCCCTA AATATCCCGTGGTTGCTGGAAGGAGCGCAGGATCATGGTCGTTCAATTTT ATGTAGCTCTTGAACGTGGAGCCATGCACGCCGCCAGGATAGAAGAATGA AGGAAGGTAGGATCGTGTTTGCTAGACGCTAAATTTTTAGTTTCCCACAT CGTGGACGTCGCTACATACGCGTGTGGCCATGGTTCTCGTTGGATGGCGA GCCGGAAAAGTGCATAGGCTCATCCGACGCCGACCAGGCACAAGTTTCTT TGGGAATTCATGACGATTCCCCGCCCGCTGCGGATTAGGTATGCGCAGGC TAGTATGTAGGCCGAGCTTCGGTTGTGCTCTGAAGTATCGTTATGCTACA CTCACCGGTAGTAGCGCGGGCCGTAATGTTTTCCGTGATGTGTTTTTGTC TCGTGCACGTTATTTCCACCACGTATGTTTTAGTTGCCCTCGCTTCGATA TTCCGTGTCGGCTTTTGATGCAATGGTAGGGTTGTGTGAGTGTTTCGGGC GGTGTTGGGTGTTGAACGGTAAATTGATTTTGTCCACCGACGTCGGTCAC GCTTGTGCTTGTGTGGTGGCATCGCTTTTGCTGTGTGACCCTTTCTGAAC TTGTTTAGTTTTAAAGTTGAAGTTGAAGTCATTGATACGAAGCGCAGGCC AGGCAGTCGTTATCGTTAGAGGTTGTCATTCGCTGTCGTTGGATGACCGT GGGTGCGTTAAGTCAAGAGGTTAAGGTTTGCTCTGTCTGTCCGGATGTTA CCACGTGTCAGAGCCTCATCGGCTCGTTCTCGTCCCACCAAGTCTTGGCG TGGGTGTATATTTTGCCGGCGAGACAAAAGAGGTCGCATACTAACATATC GCTGTAGGCTAAGCCCGTGGTTCATTTGAAATTTGGCAACAAGGCGGCAA CACGTTGAAGTTCGTGCTGATCACGACGATGATAATTCTGTTGGATGCCT CGTCAAATCTCCACTATTATTCAGATTCACGCGACAGACCATTCGAAGGT CGAGTCGGCACAGCAAGCACCGCAC
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Coding sequence (CDS) from alignment at P-lacustris_contig1014:47034..53658+

>mRNA_P-lacustris_contig1014.230.1 ID=mRNA_P-lacustris_contig1014.230.1|Name=mRNA_P-lacustris_contig1014.230.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=2892bp|location=Sequence derived from alignment at P-lacustris_contig1014:47034..53658+ (Pleurocladia lacustris SAG_25_93)
ATGCCGCGCCTAGCGTTTCTCACGTCGGGATGCGCTGTGTTCCTGACTTT
AAGCTGGGTGATCGTGGCGTTTCACCAAACGATTCAGGATGAATTCCCCG
CAAGAACAGCAGCCGGTCGAGGGGCTAAGGCAGACGTAGCACAAGCAGGC
ATGCTCGATGCTAGGAATCCCTGGGAGGAAGGCCGCGATGGCCGTAAGGG
AGAGCCCCAAGGCGATGGGAAGCCGATGGCGCCGGCCAAGAGAAAGGCGG
GGGTGAGAGGCATCACAGCGGACCGAAAAAACGTTGTCGAGACGCTGGAG
ATGGATGACCTACGAGCACCGCCAGGACGCCTGTGGATTCCTGCTGCAAT
CTCCGGTCCCGTAGTCCATACGTCGACCAAGGACCCTCTGTTCAACGTGC
TGGTGGCGTACTGCCAGCTTGACATGGCCGCCTACCACGAGAGCCCGTGG
CTGTTCGCCATGGGACCGTTCCACCAACGCACCTCGGGTTGCCTCGACGA
CGCAAGCTTGACCAGGACTTACCGACTCTCGTCCCTCAAGATGCCGCGCC
TAGCGTTTCTCACGTCGGGATGCGCTGTGTTCCTGACTTTAAGCTGGGTG
ATCGTGGCGTTTCACCAAACGATTCAGGATGAATTCCCCGCAAGAACAGC
AGCCGGTCGAGGGGCTAAGGCAGACGTAGCACAAGCAGGCATGCTCGATG
CTAGGAATCCCTGGGAGGAAGGCCGCGATGGCCGTAAGGGAGAGCCCCAA
GGCGATGGGAAGCCGATGGCGCCGGCCAAGAGAAAGGCGGGGGTGAGAGG
CATCACAGCGGACCGAAAAAACGTTGTCGAGACGCTGGAGATGGATGACC
TACGAGCACCGCCAGGACGCCTGTGGATTCCTGCTGCAATCTCCGGTCCC
GTAGTCCATACGTCGACCAAGGACCCTCTGTTCAACGTGCTGGTGGCGTA
CTGCCAGCTTGACATGGCCGCCTACCACGAGAGCCCGTGGCTGTTCGCCA
TGGGACCGTTCCACCAACGCACCTCGGGTTGCCTCGACGACGCAAGCTTG
ACCAGGACTTACCGACTCTCGTCCCTCAAGCGAATTCTGGAAGAAAACCC
GAGCGAGTTCATGGATCCTACAGGCTTCATCTACCACGAGACCCGTTGCG
GGTCAACCCTCTCGGCGAACATGATCGCCTCCGTGCCTTCCAATATCGTG
CACAGGTGTGACGAGGGGCGAATTCTGGAAGAAAACCCGAGCGAGTTCAT
GGATCCTACAGGCTTCATCTACCACGAGACCCGTTGCGGGTCAACCCTCT
CGGCGAACATGATCGCCTCCGTGCCTTCCAATATCGTGCACAGGTGTGAC
GAGGGGGGAAGTGCCCCGAGGGGGTTGAGGGAGGAACTCGTGCGCACCGT
GTTCCGCCTGATGGGGCCGGTCCAAAACGGGCACACCAACCTCTTTTTCA
AGTTCCAGAGCTCCAAGTTCGTCGCGGCGATTGAGGCCGCGTGGCCGGAG
ACGAAGTGGATCTACCTCTTCCGCGACCCGCTTGAGGTCATGGCTTCCAA
TTTGAAGGGAAGTGCCCCGAGGGGGTTGAGGGAGGAACTCGTGCGCACCG
TGTTCCGCCTGATGGGGCCGGTCCAAAACGGGCACACCAACCTCTTTTTC
AAGTTCCAGAGCTCCAAGTTCGTCGCGGCGATTGAGGCCGCGTGGCCGGA
GACGAAGTGGATCTACCTCTTCCGCGACCCGCTTGAGGTCATGGCTTCCA
ATTTGAAGGGAGCTTGGCGAAAACAGGTAACACCACCGCGCAATCCAGCG
CGCAACATCACGCTGCCCGAGTACAACCTCGGCGGGCCGTGCGTAAGGGG
GGTCAAAGGGCCGAAGACCCCGGGGGCTAAACCTAAACCACCCGGTGCGG
AACTACTAGTGACCTCTTGCGCTAAGCATCTGGAGACCTTGAACGAGGTA
GCCCTGAAGCAAATCGAGAATGGCTCTCCCAATGGTTTGGCCGTGGAGTA
TCGGCACCTGCCAGAGGGAGCTTGGCGAAAACAGGTAACACCACCGCGCA
ATCCAGCGCGCAACATCACGCTGCCCGAGTACAACCTCGGCGGGCCGTGC
GTAAGGGGGGTCAAAGGGCCGAAGACCCCGGGGGCTAAACCTAAACCACC
CGGTGCGGAACTACTAGTGACCTCTTGCGCTAAGCATCTGGAGACCTTGA
ACGAGGTAGCCCTGAAGCAAATCGAGAATGGCTCTCCCAATGGTTTGGCC
GTGGAGTATCGGCACCTGCCAGAGGTTATGACGGAGTACGTATATCCTGA
GCACTTTGGCATGGCTACCACGGAGGCCGAGCGTTCCGAATTTAAAAGCT
GGATGGAACCGGTGACGCACATGTACTCCAAGGGCATGGCAACCGTAGTC
GAACCCGGCGTCTCAAAGGTTATGACGGAGTACGTATATCCTGAGCACTT
TGGCATGGCTACCACGGAGGCCGAGCGTTCCGAATTTAAAAGCTGGATGG
AACCGGTGACGCACATGTACTCCAAGGGCATGGCAACCGTAGTCGAACCC
GGCGTCTCAAAGGAGTACGAGCAAGGGATGGACCTCGAGGTGAAAGAGGA
GGGCAGCGATCCGCGCATGCGAGCAGCGGCTGTCACCATGTGCGAGAACT
ACCGCGCTCTCGTCGCGCTGCAGAAGTGGCGCAAGCAAGTGGAAGGTGGC
ACCATGGGCACGTGTGGCGTCAGATGAGAGTACGAGCAAGGGATGGACCT
CGAGGTGAAAGAGGAGGGCAGCGATCCGCGCATGCGAGCAGCGGCTGTCA
CCATGTGCGAGAACTACCGCGCTCTCGTCGCGCTGCAGAAGTGGCGCAAG
CAAGTGGAAGGTGGCACCATGGGCACGTGTGGCGTCAGATGA
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