mRNA_P-lacustris_contig1014.230.1 (mRNA) Pleurocladia lacustris SAG_25_93
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_P-lacustris_contig1014.230.1 vs. uniprot
Match: D7G7Z3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7Z3_ECTSI) HSP 1 Score: 669 bits (1725), Expect = 5.590e-232 Identity = 349/494 (70.65%), Postives = 385/494 (77.94%), Query Frame = 1 Query: 1 MPRLAFLTSGCAVFLTLSWVIVAFHQTIQDEF--------PARTAAGRGA----KADVAQAGMLDARNPWEEGRDGRKGEPQGDGKPMAPAKRKAGVRGITADRKNVVETLEMDDLRAPPGRLWIPAAISGPVVHTSTKDPLFNVLVAYCQLDMAAYHESPWLFAMGPFHQRTSGCLDDASLTRTYRLSSLKRILEENPSEFMDPTGFIYHETRCGSTLSANMIASVPSNIVHRCDEGGSAPRGLREELVRTVFRLMGPVQNGHTNLFFKFQSSKFVAAIEAAWPETKWIYLFRDPLEVMASNLKGAWRKQVTPPRNPARNITLPE-YNLGGPCVRGVKGPKTPGAKPKPPGAELLVTSCAKHLETLNEVALKQIENGSPNGLAVEYRHLPEVMTEYVYPEHFGMATTEAERSEFKSWMEPVTHMYSKGMATVVEPGVSKEYEQGMDLEVKEEGSDPRMRAAAVTMCENYRALVALQKWRKQVEGGTMGTCGVR 1443
MPRLA L SGC+VFL LSW +VA Q + +F PA A G K D A+ L R +G+D E +GKP K++ G RGI+ DRKN+VET+EMDDLRAPPGRLWIPAA+SGP+ H S + LFNVLVAYCQLDM AYHESPWLFAMG FHQRTSGC+DD SLTRTYRLSSLKR+LEENP EFMDPTGFIYHETRCGSTLSANMIA+VPSNIVHRC P GLREELVRTVFRLMGPVQ+GHT+LFFKFQSSKF+ AIE AWPETKWIYLFRDPLEVM+SNLKGAWRKQV + RN+T P YNLGGPCVRG KG G K P E LVT+CAKHLETLNE+AL QI GSPNGLAVEYR LPEVMTEYVYP+H GMA TE ERSEFK WMEPVTH+YSKGMAT E VSKEY+QGMDLE+KE+GSDPRMRAAA TMC NYR+LV LQ+WRK+ +G TMGTC VR
Sbjct: 1 MPRLAVLISGCSVFLVLSWAMVAIRQASRPQFHSSSPTVLPAAKAQKEGGVGVHKEDAAK---LKTRFKTPDGKDLGDRELDRNGKP----KKRMGSRGISVDRKNIVETVEMDDLRAPPGRLWIPAALSGPINHDSPDNALFNVLVAYCQLDMVAYHESPWLFAMGAFHQRTSGCMDDPSLTRTYRLSSLKRVLEENPDEFMDPTGFIYHETRCGSTLSANMIAAVPSNIVHRC------PDGLREELVRTVFRLMGPVQDGHTDLFFKFQSSKFLPAIEQAWPETKWIYLFRDPLEVMSSNLKGAWRKQVA---SAERNMTSPAVYNLGGPCVRGAKG----GGSRKAPSPESLVTTCAKHLETLNEIALTQIVEGSPNGLAVEYRQLPEVMTEYVYPKHLGMAETEEERSEFKRWMEPVTHVYSKGMATPAEGAVSKEYQQGMDLELKEQGSDPRMRAAAATMCANYRSLVELQRWRKEEQGSTMGTCDVR 474
BLAST of mRNA_P-lacustris_contig1014.230.1 vs. uniprot
Match: A0A6H5KRY1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRY1_9PHAE) HSP 1 Score: 183 bits (464), Expect = 9.810e-46 Identity = 136/400 (34.00%), Postives = 205/400 (51.25%), Query Frame = 1 Query: 229 APAKRKAGVRGITAD-RKNVVETLEMDDLRAPPGRLWIPAAISGPVVHTSTKDPLFNVLVAYCQLDMAAYHESPWLFAMGPFHQRTSGCLD-DASLTRTYRLSSLKRILEENPSEFMDPTGFIYHETRCGSTLSANMIASVPSNIVHRCDEGG-----SAPRGLREELVRTVFRLMGPVQNG--HTNLFFKFQSSKFVAAIEAAWPETKWIYLFRDPLEVMASNLKGAWRKQVTPPRNPARNITLPEYNLGGPCVRGVKGPKTPGAKPKPPGAELLVTSCAKHLETLNEVALKQIENGSPNGLAVEYRHLPEVMTEYVYPEHFGMATTEAERSEFKSWMEPVTHMYSKGMATVVEPGVSKEYEQGMDLEVKEEGSDPRMRAAAVTMC-ENYRALVALQKW 1398
A AK + G G+ D K ++TL++DD++ G LWIP +++ DPL V CQ++ +Y +PWL MG SGC D + +S+LKR+LEE+ PTGFI+HETRCGSTL ANM+ASV +N++ G + P+ +E++V + +M + H + +FKFQSS+ + A+ +A+P+T WI++FR+P+EVM S L GA R + E + RG+K P +KPK G TS A+ L L + A+ E G+ VEY HLP + V P+H+G+ +EAER M T MYSK + P ++ + D + K E + ++ AA + +Y L +L W
Sbjct: 164 AAAKPQVGEHGMLHDFTKTPLDTLDLDDVKD--GHLWIPVSVNK--FDNLETDPL----VKMCQVNYDSYSAAPWLLPMGGLLSIASGCADLKRDTVQIVHMSTLKRLLEESTVPIPPPTGFIFHETRCGSTLVANMLASVETNVMWSESTGPWKVMHTCPKCHKEQIVPWLRVIMDAMTRSARHKHFYFKFQSSEDIDAVTSAYPDTPWIFIFREPIEVMMSRL-GAQRI----------GMEGMEKEVAARVERGMK-PSKILSKPKL-GKPPKETSAAQLLAGLCKKAIHAFEENPGKGMMVEYPHLPHGIVSTVLPDHYGVTVSEAERER----MMTSTQMYSKVASFAKGPTTDSKFTE--DTDTKHEAASVAVQEAAQRLLYPDYYKLRSLSTW 536
BLAST of mRNA_P-lacustris_contig1014.230.1 vs. uniprot
Match: A0A6H5K3E4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3E4_9PHAE) HSP 1 Score: 157 bits (397), Expect = 5.870e-38 Identity = 89/219 (40.64%), Postives = 125/219 (57.08%), Query Frame = 1 Query: 283 VVETLEMDDLRAPPGRLWIPAAIS----GPVVHTSTKDPLFNVLVAYCQLDMAAYHESPWLFAMGPFHQRTSGCLDDASLTRTYRLSSLKRILEENPSEFMDPTGFIYHETRCGSTLSANMIASVPSNIVHRCDEGGSAPRGLRE----------ELVRTVFRLMGPVQNGHTNLFFKFQSSKFVAAIEAAWPETKWIYLFRDPLEVMASNLKGAWRKQ 897
+ ET++++ R G LW P +S G S + + +C + MA Y E+PW + M Q+ S C +L R++RLS L+ + E+P EF+ P GF+YHETR GSTL ANM+A VPSN+V E A +R L+R + L+G +NGH +LFFKFQ S + + A+PE W+YLFRDP+EVM SNLKGA+ K+
Sbjct: 137 ISETVDLEVPRE--GLLWQPTTMSPLKCGEAADASADE--CEATITFCLMRMAEYQETPWKYPMAVMLQKKSECSKAENL-RSFRLSDLRTYMREHPEEFLQPNGFVYHETRTGSTLVANMLAHVPSNLV--VSENNMAEDPVRRCSDCTEMQKVALLREIMTLLGNGRNGHEHLFFKFQDSTTLPLMMKAYPEVGWVYLFRDPVEVMVSNLKGAYGKR 348
BLAST of mRNA_P-lacustris_contig1014.230.1 vs. uniprot
Match: D7G7C8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7C8_ECTSI) HSP 1 Score: 150 bits (379), Expect = 9.160e-35 Identity = 87/212 (41.04%), Postives = 121/212 (57.08%), Query Frame = 1 Query: 283 VVETLEMDDLRAPPGRLWIPAAISGPVVHTSTKDPLFN---VLVAYCQLDMAAYHESPWLFAMGPFHQRTSGCLDDASLTRTYRLSSLKRILEENPSEFMDPTGFIYHETRCGSTLSANMIASVPSNIVHRCDEGGSAPRGLRE----------ELVRTVFRLMGPVQNGHTNLFFKFQSSKFVAAIEAAWPETKWIYLFRDPLEVMASNLK 879
V ET++++ R G LW P +S P+ D + + +C + MA Y E+PW + M Q+ SGC +L R++ LS L+ + E+P EF+ P GF+YHETR GSTL ANM+A VPSN+V E A +R L+R + L+G +NGH +LFFKFQ S + + A+PE W+YLFRDP+EVM SNLK
Sbjct: 13 VSETVDLEVPRE--GLLWQPTLMS-PLKCGEAADLAADECEATITFCLMRMAEYQETPWKYPMAVMLQKKSGCSKAENL-RSFHLSDLRTYMREHPEEFLQPNGFVYHETRTGSTLVANMLAHVPSNLV--VSESNMAEDPVRRCSHCTEMQKVTLLREIMTLLGNGRNGHKHLFFKFQDSTTLPLMMKAYPEVGWVYLFRDPVEVMVSNLK 218
BLAST of mRNA_P-lacustris_contig1014.230.1 vs. uniprot
Match: A0A836CJX0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJX0_9STRA) HSP 1 Score: 145 bits (365), Expect = 1.550e-33 Identity = 106/376 (28.19%), Postives = 165/376 (43.88%), Query Frame = 1 Query: 394 NVLVAYCQLDMAAYHESPWLFAMGPFHQRTSGCLDDASLTRTYRLSSLKRILEENPSEFMDPTGFIYHETRCGSTLSANMIASVPS------NIVHRCDEGGSAPRGLREELVRTVFRLMGPVQNGHTNLFFKFQSSKFVAAIEAAWPETKWIYLFRDPLEVMASNLKGAWRKQVTPPRNPARNITLPEYNLGG--PCVRGVKGPKTPGAKPKPPGA---ELLVTSCAKHLETLNEVALKQIENGSPNGLAVEYRHLPEVMTEYVYPEHFGMATTEAERSEFKSWMEPVTHMYSKGMATVVEPGV-----------SKEYEQGMDLEVKEEGSDPRMR------------AAAVTMCENYRALVALQKWRKQVEGG 1419
V++C +++A Y PW M S C TR Y L+ L + NP ++ P+GFI+HETRCGSTL ANMIA +P+ ++V A LR VR +FR + Q+ H FFK ++ + +P+T W++LFR+PL+V+ SN++GAW K+ A + + + PC+R P P G + CA L+ + A+ L ++Y++LPE +TEY++P HF ER +ME YSK ++ G D ++KE+ +R T+ +Y L+A+Q+W K +GG
Sbjct: 70 GTFVSFCNMNIADYQSEPWKTPMDQMLAVASNCRSRTH-TRKYSLADLMAHQQRNPERYLSPSGFIHHETRCGSTLVANMIAHIPTALMVSESLVPYKALQLKASGELRVSEVRALFRALCFTQHHHDRCFFKLPGGTMLSQFQEVFPDTPWVFLFREPLDVVVSNMRGAWGKKELLYSEAASGQLIEKASKKAIAPCLR----------MPLPDGVTRDDAPEMRCAGGLDKICRDAMAAARARPDLALVLDYKNLPEAVTEYLWPVHFRQGPARTERD--LPYMEEAGRAYSKHNXXXXXXXXXXXXXKTMKRDKADFALGADADLKEKQLTDAIRRXXXXXXXMRDAVETSTITGSYEELLAMQRWTK--DGG 430
BLAST of mRNA_P-lacustris_contig1014.230.1 vs. uniprot
Match: D7FT31_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT31_ECTSI) HSP 1 Score: 143 bits (361), Expect = 3.090e-33 Identity = 109/320 (34.06%), Postives = 161/320 (50.31%), Query Frame = 1 Query: 463 GPFHQRTSGCLDDASLTRTYRLSSLKRILEENPSEFMDPTGFIYHETRCGSTLSANMIASVPSNIVHRCDEGG-----SAPRGLREELVRTVFRLMGPVQNG--HTNLFFKFQSSKFVAAIEAAWPETKWIYLFRDPLEVMASNLKGAWRKQVTPPRNPARNITLPEYNLGGPCVRGVKGPKTPGAKPKPPGAELLVTSCAKHLETLNEVALKQIENGSPNGLAVEYRHLPEVMTEYVYPEHFGMATTEAERSEFKSWMEPVTHMYSKGMATVVEPGVSKEYEQGMDLEVKEEGSDPRMRAAAVTMC-ENYRALVALQKW 1398
G H T LD T L +KR+LEE+ PTGFI+HETRCGSTL ANM+ASV +N++ G + P+ +E++V + +M + H + +FKFQSS+ + A+ +A+P+T WI++FR+P+EVM S L GA R + E + RG+K K P +KPK G TS A+ L L + A+ E G+ VEY HLP + V P+H+G+ +EAER S T MYSK + ++ + D + K E + ++ AA + +Y L +L W
Sbjct: 109 GMLHDFTKTPLD------TLDLDDVKRLLEESTVPIPPPTGFIFHETRCGSTLVANMLASVETNVMWSESTGPWKVMHTCPKCHKEQIVPWLRVIMDAMARSARHDHFYFKFQSSEDIDAVTSAYPDTPWIFIFREPIEVMMSRL-GAQRI----------GMEGMEKEVAARVERGMKPSKIP-SKPKL-GKPPKETSAAQVLAGLCKKAIHAFEANPGKGMMVEYPHLPHGILSTVLPDHYGVTVSEAERERMMS----TTQMYSKVASFAKGSTTDSKFTE--DTDTKHEAASVAVQEAAQRLLYADYYKLRSLSTW 403
BLAST of mRNA_P-lacustris_contig1014.230.1 vs. uniprot
Match: A0A6H5JFB5_9PHAE (JmjC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JFB5_9PHAE) HSP 1 Score: 129 bits (324), Expect = 5.590e-27 Identity = 112/399 (28.07%), Postives = 180/399 (45.11%), Query Frame = 1 Query: 259 GITADRKNVVETLEMDDLRAPPGRLWIPAAISGPVVHTSTKDPLFNVLVAYCQLDMAAYHESPWLFAMGPFHQRTSGCLDDASLTRTYRLSSLKRILEENPSEFMDPTGFIYHETRCGSTLSANMIASVPSNIVHR-----------CDEGGSAPRGLREELVRTVFRLMGPVQNGHTNLFFKFQSS--KFVAAIEAAWPETKWIYLFRDPLEVMASNLKGAWRKQVTPPRNPARNITLPEYNLGGPCVRGVKGP----------KTPGAKPKPPGAELLVTSCAKHLETLNEVALKQIEN----GSPNGLAVEYRHLPEVMTEYVYPEHFGMATTEAERSE-FKSWMEPVTHMYSKGMATVVEPGVSKEYEQGMDLEVKEEGSDPRMRAAAVTMCENY 1371
G+ D + + D+R P +P ++ P+ S + V C LD Y P+ + M + SG A T T +S L+ ++ NP +++PTGF++H +RCGSTL+AN++ S P NIV+ CD+ G R +RTV MG + H ++FFKFQSS +F+ A+P T W++++RDP+ VM S L ++ +T + P+R+ PC+R + P T AK P CA HL TL E AL+ +++ G G AV+Y LP + + SE FK+ + P Y+ +++ + Y D + KE+ + P + AA ++ E +
Sbjct: 52 GLGGDEETAGPSAGFVDVRVPAET--VPVSLGRPI--GSVAGGTLDAQVFMCSLDRDTYFHQPYKYPMFKDLVKLSGGCQGAQSTAT-SISKLQDEIDANPEGYLEPTGFVFHMSRCGSTLTANLMGSSPHNIVYSESKPPVAVMSLCDQVGCTEE-QRVAALRTVILAMGKT-SFHKHMFFKFQSSQTRFIHYYRKAFPNTPWVFVYRDPVPVMMSLL--GFKAGMT--QRPSRST---------PCLRSMGSPPDETAKLLGMSTSEAKKAP-----FERYCAAHLATLVESALESVDDAAASGGAEGHAVDYETLPNAIVPVM--------------SELFKAPLTPEEEYYALEISSWYAKSRGEAYNFSPDTKAKEDHASPEVEQAARSILEPF 411
BLAST of mRNA_P-lacustris_contig1014.230.1 vs. uniprot
Match: F2UI36_SALR5 (JmjC domain-containing protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2UI36_SALR5) HSP 1 Score: 127 bits (318), Expect = 2.590e-26 Identity = 100/295 (33.90%), Postives = 143/295 (48.47%), Query Frame = 1 Query: 403 VAYCQLDMAAYHESPWLFAMGPFHQRTSGCLDDASLTRTYRLSSLKRILEENPSEFMDPTGFIYHETRCGSTLSANMIASVPSNIVHRCDEGGSA-------PRGLREELVRTVFRLMGPVQNGHTNLFFKFQS--SKFVAAIEAAWPETKWIYLFRDPLEVMASNLKGAWRKQVTPPRNPARNITLPEYNLGGPCVRGVKGPKTPGAKPKPPGAELLVTSCAKHLETLNEVALKQIENGSPNGLAVEYRHLPEVMTEYVYPEHFGMATTEAERSEFKSWMEPVTHMYSKGMATV 1260
V C+L++ AY P+ + M R S C + T T L+ L+ + E +DP GF++HE+R GSTL AN++A+ P N+V A P + E++R + R M H LFFKFQS + + A+PE W++++RDP+EVMAS+ K P A+N P + R ++ K P E CA HL TL + AL +++ SPNG+AV Y LP+V+ V+P HFG T + K M V YSKG A V
Sbjct: 84 VELCRLNIEAYTAEPYKYPMFKDLLRVSNCKGN---TMTVTLNDLRFGIPET----LDPAGFVFHESRVGSTLIANILAADPDNLVFSESAPPPAIALHCPAPLPEKAEMMRVLLRAMSNSVR-HKRLFFKFQSVNANAIPLYTEAFPEVPWMFVYRDPVEVMASHFKQKVPAGAKVPCLRAKNSPTPLHR------RYIRS--------KNPSDEEF---CAAHLATLCDSALHALDS-SPNGIAVNYHDLPDVLYTRVFPVHFGYTPTPS----VKRNMVNVAQEYSKGRAGV 348
BLAST of mRNA_P-lacustris_contig1014.230.1 vs. uniprot
Match: A0A7S2S3F9_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S3F9_9STRA) HSP 1 Score: 122 bits (306), Expect = 6.110e-26 Identity = 100/355 (28.17%), Postives = 161/355 (45.35%), Query Frame = 1 Query: 394 NVLVAYCQLDMAAYHESPWLFAMGPFH-QRTSGCLDDASLTRTYRLSSLKRILEENPSE---FMDPTGFIYHETRCGSTLSANMIASV-------------PSNIVHRCD--EGGSAPRGLREELVRTVFRLMGPVQNG-HTNLFFKFQS--SKFVAAIEAAWPETKWIYLFRDPLEVMASNLKGAWRKQVTPPRNPARNITLPEYNLGGPCVRGVKGPKTPGAKPKPPGAELLVTSCAKHLETLNEVALKQIENGSPNGLAVEYRHLPEVMTEYVYPEHFGMATTEAERSEFKSWMEPVTHMYSKGMATVVE-PGVSKEYEQGMDLEVKEEGSDPRMRAAAVTMCENYRALVAL 1389
V +C +D + + P M F Q++ GC ++ + +K + N M P GF++HE+RCGSTL AN +A++ P ++ C +G +L R V +MG + NLFFK QS +K++ A+PE WI+++RDP++VM S+LK + N R +++P +L + KG P+ CA HL TL E A+ +++ G AV Y LP ++ + + PEHFG+ + A+R+ ++ YSKG +E S E E+ +EVK AA + + E++R L L
Sbjct: 101 GVFGRFCTVDWSLHKNDPAAHPMFRFLVQKSPGCAKPVNVNFKEIVDKVKEFDKTNNGNDVHVMAPKGFVFHESRCGSTLVANSLAAMDPSKNRVYSESPPPLEVLKSCGLHKGACGGGDQAIQLFRDVVYMMGRTNDAKEQNLFFKIQSVGTKYIDIARMAFPEVPWIFVYRDPVQVMMSHLKYGPHRA-----NCVRQLSIPPTHLK--TILDGKGLTKKKMTPE--------HQCAIHLNTLCESAVSSLQSSPSYGKAVNYNLLPGILVDSIVPEHFGVPLSSADRARITE----ISSTYSKGKGEAIEWKEDSSEKEKNASVEVKS--------AADLFLYESFRKLEGL 428
BLAST of mRNA_P-lacustris_contig1014.230.1 vs. uniprot
Match: A0A7S2XNG6_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XNG6_9STRA) HSP 1 Score: 122 bits (307), Expect = 6.950e-26 Identity = 107/375 (28.53%), Postives = 162/375 (43.20%), Query Frame = 1 Query: 367 HTSTKDPLFNVLVAYCQLDMAAYHESPWLFAMGPFHQRTSGCLDDASLTRTYRLSSLKRILEENPSEF----------MDPTGFIYHETRCGSTLSANMIASV-------------PSNIVHRCDEG-GSAPRGLREELVRTVFRLMGPVQNGH-TNLFFKFQS--SKFVAAIEAAWPETKWIYLFRDPLEVMASNLKGAWRKQVTPPRNPARNITLPEYNLGGPCVRGVKGPKTPGAKPKPPGAELLVTS--------------CAKHLETLNEVALKQIENGSPNGLAVEYRHLPEVMTEYVYPEHFGMATTEAERSEFKSWMEPVTHMYSKGMATVVEPGVSKEYEQGMDLEVKEEGSDPRMRAAAVTMCEN 1368
+STK V +CQL+ AA+ P + M F + D T L + + E +E M+PTGF++HE+RCGSTL AN + + P + C E S + +L R V LMG + +NLFFK QS SK +A + A+P T WI+++R+P++VM S L+ A +Q CVR + P P + LV CA HL + E A+K ++ S NGLAV Y LP+++ V P+HF + + E+ +E V+ YSKG +K+ E D E K+ G+ ++ A+ T ++
Sbjct: 112 RSSTKGTYQGVTGGFCQLNFAAHKNDPSKYPM--FRDLVAASPDCQKSHVTLDLKYIAELAREFDAEMTELGTKVPHAMEPTGFVFHESRCGSTLVANSLIGMDPKHHRVYSESAPPLQALTACGEDYQSCDVEIAADLFRDVVYLMGRTNDAEESNLFFKIQSAGSKNIATFQTAFPHTPWIFVYREPVQVMMSQLRVARIEQAN-------------------CVRSRRSP--------PKRIKSLVQKIIREHASDLDYEDYCAAHLAVICESAVKALQT-SANGLAVNYNTLPDILATTVLPKHFHVNVGDVEKRN----IETVSQQYSKGRD-------NKKTEWKDDSEKKDAGASEEIKTASATFLQS 445 The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig1014.230.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-lacustris_contig1014.230.1 >prot_P-lacustris_contig1014.230.1 ID=prot_P-lacustris_contig1014.230.1|Name=mRNA_P-lacustris_contig1014.230.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=482bp MPRLAFLTSGCAVFLTLSWVIVAFHQTIQDEFPARTAAGRGAKADVAQAGback to top mRNA from alignment at P-lacustris_contig1014:47034..53658+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-lacustris_contig1014.230.1 ID=mRNA_P-lacustris_contig1014.230.1|Name=mRNA_P-lacustris_contig1014.230.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=6625bp|location=Sequence derived from alignment at P-lacustris_contig1014:47034..53658+ (Pleurocladia lacustris SAG_25_93)back to top Coding sequence (CDS) from alignment at P-lacustris_contig1014:47034..53658+ >mRNA_P-lacustris_contig1014.230.1 ID=mRNA_P-lacustris_contig1014.230.1|Name=mRNA_P-lacustris_contig1014.230.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=2892bp|location=Sequence derived from alignment at P-lacustris_contig1014:47034..53658+ (Pleurocladia lacustris SAG_25_93)back to top |