mRNA_P-lacustris_contig101.199.1 (mRNA) Pleurocladia lacustris SAG_25_93
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Overview
Homology
BLAST of mRNA_P-lacustris_contig101.199.1 vs. uniprot
Match: D7G1T0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1T0_ECTSI) HSP 1 Score: 209 bits (532), Expect = 5.240e-64 Identity = 106/152 (69.74%), Postives = 120/152 (78.95%), Query Frame = 2
Query: 212 MICTYLVGINALSFMMHAEDKASSVGWLPFVGRIPEALLHQVELAGGSPGSFLGQRLFRHKVSKLSYQRGFSQVLIVQVAASIVWGYFKGATWALAAAGLAPAVMFALTARHMRTFKYRQHRRDNGSYGDGRHQPWQRPVDVSAPAGRRRNT 667
++ Y VG NALSF M AEDKASS GW+PF+GRIPEALLHQVEL GGSPGSFLGQR+FRHK+SKL+YQR FSQVL VQ+AASI WGYF G +WAL GLAPAVMFA TAR M T K+R + R+ + QPWQRPVDVS+ A RRRNT
Sbjct: 2 ILAAYFVGANALSFAMLAEDKASSKGWIPFLGRIPEALLHQVELVGGSPGSFLGQRVFRHKISKLAYQRSFSQVLAVQIAASIAWGYFHGPSWALLGMGLAPAVMFAATARRMSTLKHRDNARNRWN------QPWQRPVDVSSSARRRRNT 147
BLAST of mRNA_P-lacustris_contig101.199.1 vs. uniprot
Match: A0A6H5K9I2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9I2_9PHAE) HSP 1 Score: 199 bits (505), Expect = 5.900e-60 Identity = 102/152 (67.11%), Postives = 119/152 (78.29%), Query Frame = 2
Query: 212 MICTYLVGINALSFMMHAEDKASSVGWLPFVGRIPEALLHQVELAGGSPGSFLGQRLFRHKVSKLSYQRGFSQVLIVQVAASIVWGYFKGATWALAAAGLAPAVMFALTARHMRTFKYRQHRRDNGSYGDGRHQPWQRPVDVSAPAGRRRNT 667
++ + VG+NALSF M AEDKASS G +PF+GRIPEALLHQVELAGGSPGSFLGQR+F+HK+SKL+YQRGFSQVL Q+AA+I WGYF G +WAL GLAP VMFA TAR M T K++ R+ HQPWQRPVDVS+ A RRRNT
Sbjct: 2 ILAAFFVGVNALSFAMLAEDKASSKGLIPFLGRIPEALLHQVELAGGSPGSFLGQRVFQHKISKLAYQRGFSQVLAAQIAANIAWGYFHGPSWALLGVGLAPVVMFAATARRMNTLKHQDSTRNRW------HQPWQRPVDVSS-ARRRRNT 146
BLAST of mRNA_P-lacustris_contig101.199.1 vs. uniprot
Match: A0A1V5MWG7_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium ADurb.Bin412 TaxID=1852905 RepID=A0A1V5MWG7_9BACT) HSP 1 Score: 70.5 bits (171), Expect = 2.120e-11 Identity = 33/85 (38.82%), Postives = 55/85 (64.71%), Query Frame = 2
Query: 212 MICTYLVGINALSFMMHAEDKASSVGWLPFVGRIPEALLHQVELAGGSPGSFLGQRLFRHKVSKLSYQRGFSQVLIVQVAASIVW 466
++ +YL I+ ++F+M+ DKA +V GR+PE +LH + LAGG+PG+F GQ +FRHK K ++ F + ++Q+ A I +
Sbjct: 32 LLVSYLASISGITFLMYGFDKARAV---KNQGRVPELILHGLALAGGTPGAFFGQLVFRHKTRKWKFRIVFILIFLLQIGALIYY 113
BLAST of mRNA_P-lacustris_contig101.199.1 vs. uniprot
Match: A0A7M2WUF6_9BACT (DUF1294 domain-containing protein n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7M2WUF6_9BACT) HSP 1 Score: 64.3 bits (155), Expect = 4.100e-9 Identity = 35/89 (39.33%), Postives = 49/89 (55.06%), Query Frame = 2
Query: 215 ICTYLVGINALSFMMHAEDKA-SSVGWLPFVGRIPEALLHQVELAGGSPGSFLGQRLFRHKVSKLSYQRGFSQVLIVQVAASIVWGYFK 478
+ YL IN + +++ DK +S G L R+PE +LH GG+PG+F GQRLFRHK K S+QR F + +Q+ W Y
Sbjct: 41 VWAYLAAINVTTLLLYGFDKRQASTGGL----RVPEKVLHTHAFVGGTPGAFCGQRLFRHKTIKGSFQRLFWGIFGLQLLLIAAWIYLS 125
BLAST of mRNA_P-lacustris_contig101.199.1 vs. uniprot
Match: A0A7V2IL43_9BACT (DUF1294 domain-containing protein n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7V2IL43_9BACT) HSP 1 Score: 60.5 bits (145), Expect = 4.080e-8 Identity = 34/88 (38.64%), Postives = 48/88 (54.55%), Query Frame = 2
Query: 224 YLVGINALSFMMHAEDKASSVGWLPFVGRIPEALLHQVELAGGSPGSFLGQRLFRHKVSKLSYQRGFSQVLIVQVAASIVWGYFKGAT 487
YL + ++F DK ++ GRIPEA+LH + LAGGS G+ GQ LFRHK+ KL + + ++ VQ+ W Y AT
Sbjct: 7 YLTALTLVTFAFFGFDKHRAIRGR---GRIPEAVLHLLALAGGSLGALAGQILFRHKIRKLYFTAILAMIVAVQLGCIAWWIYRTRAT 91
BLAST of mRNA_P-lacustris_contig101.199.1 vs. uniprot
Match: UPI001904956F (DUF1294 domain-containing protein n=2 Tax=Haloferula rosea TaxID=490093 RepID=UPI001904956F) HSP 1 Score: 62.0 bits (149), Expect = 1.150e-7 Identity = 31/45 (68.89%), Postives = 34/45 (75.56%), Query Frame = 2
Query: 308 RIPEALLHQVELAGGSPGSFLGQRLFRHKVSKLSYQRGFSQVLIV 442
RIPEA LH EL GG PGSFLGQRL RHKVSK SYQ F +++V
Sbjct: 134 RIPEATLHLFELMGGWPGSFLGQRLLRHKVSKKSYQMIFWAIVLV 178
BLAST of mRNA_P-lacustris_contig101.199.1 vs. uniprot
Match: A0A259DYK7_9SPHN (Uncharacterized protein n=2 Tax=Sphingomonadales TaxID=204457 RepID=A0A259DYK7_9SPHN) HSP 1 Score: 59.3 bits (142), Expect = 1.450e-7 Identity = 33/92 (35.87%), Postives = 50/92 (54.35%), Query Frame = 2
Query: 197 LLQREMICTYLVGINALSFMMHAEDKASSVGWLPFVGR--IPEALLHQVELAGGSPGSFLGQRLFRHKVSKLSYQRGFSQVLIVQVAASIVW 466
LL E + T L+ +NA +F+ DK W GR + E L Q+ L GG+PG++LG+R+FRHK K + R + +Q+ A + W
Sbjct: 8 LLTIENVVTALLALNATTFVSFGIDK-----WKARTGRWRVSEGTLLQLALLGGTPGAYLGRRVFRHKTRKQPFVRYLHTIAFLQIIAIVCW 94
BLAST of mRNA_P-lacustris_contig101.199.1 vs. uniprot
Match: A0A6A7YTS5_9PSED (DUF1294 domain-containing protein n=1 Tax=Pseudomonas helleri TaxID=1608996 RepID=A0A6A7YTS5_9PSED) HSP 1 Score: 59.7 bits (143), Expect = 1.480e-7 Identity = 36/82 (43.90%), Postives = 47/82 (57.32%), Query Frame = 2
Query: 239 NALSFMMHAEDK--ASSVGWLPFVGRIPEALLHQVELAGGSPGSFLGQRLFRHKVSKLSYQRGFSQVLIVQVAASIVWGYFK 478
+ L+F M+ DK A + W RIPE +LH +EL GG PG+ L Q++FRHK KLSYQ F ++ V A I Y K
Sbjct: 39 SGLAFGMYGYDKRQAKAGEW-----RIPEKVLHAIELLGGWPGALLAQQVFRHKTRKLSYQLWFWLIVAVHQALWIDVLYLK 115
BLAST of mRNA_P-lacustris_contig101.199.1 vs. uniprot
Match: A0A191YT64_9PSED (Uncharacterized protein n=3 Tax=Pseudomonas TaxID=286 RepID=A0A191YT64_9PSED) HSP 1 Score: 59.7 bits (143), Expect = 2.460e-7 Identity = 32/71 (45.07%), Postives = 46/71 (64.79%), Query Frame = 2
Query: 236 INALSFMMHAEDK--ASSVGWLPFVGRIPEALLHQVELAGGSPGSFLGQRLFRHKVSKLSYQRGFSQVLIV 442
++ L+F+++ DK A W RIPE LLH VELAGG PG+ L Q++FRHK KLS+Q F ++++
Sbjct: 58 VSGLAFLLYWSDKRKARLDRW-----RIPENLLHAVELAGGWPGALLAQQVFRHKTRKLSFQLLFWMIVLL 123
BLAST of mRNA_P-lacustris_contig101.199.1 vs. uniprot
Match: A0A356NHF9_9BACT (DUF1294 domain-containing protein n=4 Tax=Verrucomicrobiales TaxID=48461 RepID=A0A356NHF9_9BACT) HSP 1 Score: 58.5 bits (140), Expect = 3.060e-7 Identity = 31/74 (41.89%), Postives = 44/74 (59.46%), Query Frame = 2
Query: 224 YLVGINALSFMMHAEDKASSVGWLPFVGRIPEALLHQVELAGGSPGSFLGQRLFRHKVSKLSYQRGFSQVLIVQ 445
YL IN + F + EDK ++ R PE +LH + LAGG G+ LGQ++FRHK K S+QR F ++ +Q
Sbjct: 34 YLASINIICFGFYGEDKWRAIKQ---ESRAPEGMLHLMALAGGVLGARLGQKVFRHKTLKGSFQRAFWFIVFLQ 104 The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig101.199.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-lacustris_contig101.199.1 >prot_P-lacustris_contig101.199.1 ID=prot_P-lacustris_contig101.199.1|Name=mRNA_P-lacustris_contig101.199.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=161bp MICTYLVGINALSFMMHAEDKASSVGWLPFVGRIPEALLHQVELAGGSPGback to top mRNA from alignment at P-lacustris_contig101:207189..209082+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-lacustris_contig101.199.1 ID=mRNA_P-lacustris_contig101.199.1|Name=mRNA_P-lacustris_contig101.199.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=1894bp|location=Sequence derived from alignment at P-lacustris_contig101:207189..209082+ (Pleurocladia lacustris SAG_25_93)back to top Coding sequence (CDS) from alignment at P-lacustris_contig101:207189..209082+ >mRNA_P-lacustris_contig101.199.1 ID=mRNA_P-lacustris_contig101.199.1|Name=mRNA_P-lacustris_contig101.199.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=966bp|location=Sequence derived from alignment at P-lacustris_contig101:207189..209082+ (Pleurocladia lacustris SAG_25_93)back to top |