mRNA_P-lacustris_contig101.197.1 (mRNA) Pleurocladia lacustris SAG_25_93
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Overview
Homology
BLAST of mRNA_P-lacustris_contig101.197.1 vs. uniprot
Match: A0A6H5KF40_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF40_9PHAE) HSP 1 Score: 169 bits (427), Expect = 1.270e-47 Identity = 90/175 (51.43%), Postives = 116/175 (66.29%), Query Frame = 2
Query: 140 AGLLAGLLGLLLEHVSPSVDIDTLLRRVFWRYVKAHKSRTGHG-DLEDLLGGELIHEDFLAQVATPILLFAGSDMAGLPVPEIGTHETVACKATRKARAWSKLTNGGFANANARAFQETLWYNLFQFMVGPRRTMNPMTTLSKDFFDNAEIVKYVAPY-ASIDDLVVPETQEPDV 658
A LL G+ +++ S ++ L+ RV WR+ KA+++ T L LLG E + EDFL QV TP LL A +D+A LPV EIGTHET+ CK TRK+RAW KL+ GGF +A+ARAFQE+LWYNLFQFM GPRR + T+ F EI++++APY D LVVPET DV
Sbjct: 55 ADLLRGVCERIMDVDPESEELTGLMSRVMWRFTKAYQASTRKTLTLGYLLGPERLKEDFLGQVVTPALLHAANDIAALPVNEIGTHETIVCKVTRKSRAWIKLSAGGFGSADARAFQESLWYNLFQFMTGPRRCTAAILTIPSSDFHKPEIMRFLAPYYVEKDSLVVPETPAADV 229
BLAST of mRNA_P-lacustris_contig101.197.1 vs. uniprot
Match: A0A6H5K5R4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5R4_9PHAE) HSP 1 Score: 169 bits (428), Expect = 1.200e-45 Identity = 89/175 (50.86%), Postives = 115/175 (65.71%), Query Frame = 2
Query: 140 AGLLAGLLGLLLEHVSPSVDIDTLLRRVFWRYVKAHKSRTGHG-DLEDLLGGELIHEDFLAQVATPILLFAGSDMAGLPVPEIGTHETVACKATRKARAWSKLTNGGFANANARAFQETLWYNLFQFMVGPRRTMNPMTTLSKDFFDNAEIVKYVAPY-ASIDDLVVPETQEPDV 658
A LL G+ +++ S ++ L+ R+ WR+ KAH++ T L LLG E + +DFL QV TP LL A +D+A LPV EIGTHET+ CK TRK+RAW KL+ GGF +ANARAFQE+LWYNLFQFM GPRR + T+ F EI++++APY D L VPET DV
Sbjct: 312 ADLLRGVRERIMDVDPESEELTGLMSRIMWRFTKAHQASTRKALTLGFLLGPERLKDDFLGQVVTPALLHAANDIAALPVNEIGTHETIVCKVTRKSRAWIKLSAGGFGSANARAFQESLWYNLFQFMTGPRRCTAAILTIPSSDFHKPEIMRFLAPYFVEKDSLDVPETPAADV 486
BLAST of mRNA_P-lacustris_contig101.197.1 vs. uniprot
Match: A0A6H5KR20_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR20_9PHAE) HSP 1 Score: 158 bits (399), Expect = 1.620e-42 Identity = 84/171 (49.12%), Postives = 112/171 (65.50%), Query Frame = 2
Query: 140 AGLLAGLLGLLLEHVSPSVDIDTLLRRVFWRYVKAHKSRTGHG-DLEDLLGGELIHEDFLAQVATPILLFAGSDMAGLPVPEIGTHETVACKATRKARAWSKLTNGGFANANARAFQETLWYNLFQFMVGPRRTMNPMTTLSKDFFDNAEIVKYVAPY-ASIDDLVVPETQ 646
A LL G+ +++ S ++ L+ R+ WR+ KAH++ T L LLG E + EDFL QV TP LL A +D+A LPV EIGTHET+ CK RK++AW KL+ GG +ANARAFQE+LWYNLFQFM GPRR + T+ F EI++++A Y + LVVPET+
Sbjct: 162 ADLLRGVRERIMDVDPESEELTGLMFRIMWRFTKAHQASTRKVLTLGYLLGPERLKEDFLGQVVTPALLHAANDIAALPVNEIGTHETIVCKVIRKSKAWIKLSAGGIGSANARAFQESLWYNLFQFMTGPRRCTAAILTIPSSDFHKPEIMRFLARYYVEKNSLVVPETR 332
BLAST of mRNA_P-lacustris_contig101.197.1 vs. uniprot
Match: D7FUZ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUZ7_ECTSI) HSP 1 Score: 144 bits (364), Expect = 2.250e-36 Identity = 104/270 (38.52%), Postives = 130/270 (48.15%), Query Frame = 2
Query: 20 TSLEESHDAGVGGVATINALMTSQELFDAMETAEVPRPQLAGLLAGLLGLLLEHVSPSV------------------------------------------------DIDT-------LLRRVFWRYVKAHKSRTGHG-DLEDLLGGELIHEDFLAQVATPILLFAGSDMAGLPVPEIGTHETVACKATRKARAWSKLTNGGFANANARAFQETLWYNLFQFMVGPRRTMNPMTTLSKDFFDNAEIVKYVAPY-ASIDDLVVPETQEPDV 658
TS + G+GGV+TIN M+ Q LFDA++TA VP+ A LLGLLL+ +SP V D+D L+ R+ WR+ KAH++ T L LLG E + EDFL QV TP LL A +D+A LPV EIGTHET+ CK TRK+RAW KL+ GGF +ANA AFQE S DF EI++++APY D LVVPET DV
Sbjct: 254 TSGRSATKTGIGGVSTINMEMSGQNLFDALDTALVPK----AAKAALLGLLLQLISPDVSSRPGRELHAEIRNAIAEFLVPLMEEEASTNNPMTGADLFRGVRERIMDVDPESTELTGLMSRIMWRFTKAHQASTRKALTLGYLLGPERLKEDFLGQVVTPALLQAANDIAALPVNEIGTHETIVCKVTRKSRAWIKLSAGGFGSANAWAFQE-----------------------SSDFH-KPEIMRFLAPYYVEKDSLVVPETPAADV 495
BLAST of mRNA_P-lacustris_contig101.197.1 vs. uniprot
Match: A0A6H5KHD1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHD1_9PHAE) HSP 1 Score: 134 bits (337), Expect = 1.260e-34 Identity = 67/113 (59.29%), Postives = 80/113 (70.80%), Query Frame = 2
Query: 323 VATPILLFAGSDMAGLPVPEIGTHETVACKATRKARAWSKLTNGGFANANARAFQETLWYNLFQFMVGPRRTMNPMTTLSKDFFDNAEIVKYVAPY-ASIDDLVVPETQEPDV 658
V TP LL A +D+A LPV EIGTHET+ CK TRK+RAW KL+ GGF +ANARA QE+LWYNLFQFM GPRR + T+ F EI++++APY D LVVPET DV
Sbjct: 121 VVTPALLHAANDIAALPVNEIGTHETIVCKVTRKSRAWIKLSAGGFGSANARAIQESLWYNLFQFMTGPRRCTAAILTIPSSDFHKPEIMRFLAPYYVEKDSLVVPETLAADV 233
BLAST of mRNA_P-lacustris_contig101.197.1 vs. uniprot
Match: A0A6H5K1Q8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1Q8_9PHAE) HSP 1 Score: 130 bits (327), Expect = 3.720e-33 Identity = 72/156 (46.15%), Postives = 96/156 (61.54%), Query Frame = 2
Query: 200 IDTLLRRVFWRYVKAHKSRTGHGDLED--LLGGELIHEDFLAQVATPILLFAGSDMAGLPVPEIGTHETVACKATRKARAWSKLTNGGFANANARAFQETLWYNLFQFMVGPRRTMNPMTTLSKDFFDNAEIVKYVAPYAS-IDDLVVPETQEPDV 658
I+TLL RV WRY KAH T DL + L+G + +HEDFLAQ IGT E+V CK TRKARAW +L+NGG+++ NA+AFQE WY++ QFM GPRR + + T+ K F N +I+++++PY D+LVV ET DV
Sbjct: 5 INTLLHRVMWRYTKAHMQSTRE-DLSEGQLVGEDRLHEDFLAQ--------------------IGTLESVVCKCTRKARAWGRLSNGGYSSTNAKAFQEGFWYSMLQFMTGPRRHASGILTIPKSDFGNPKIMRFLSPYVGGNDNLVVEETPAEDV 139
BLAST of mRNA_P-lacustris_contig101.197.1 vs. uniprot
Match: A0A6H5KEJ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEJ3_9PHAE) HSP 1 Score: 131 bits (329), Expect = 3.730e-32 Identity = 77/187 (41.18%), Postives = 110/187 (58.82%), Query Frame = 2
Query: 110 ETAEVPRPQLAGLLAGLLGLLLEHVSPSVD-IDTLLRRVFWRYVKAHKSRTGHGDLED--LLGGELIHEDFLAQVATPILLFAGSDMAGLPVPEIGTHETVACKATRKARAWSKLTNGGFANANARAFQETLWYNLFQFMVGPRRTMNPMTTLSKDFFDNAEIVKYVAPYAS-IDDLVVPETQEPDV 658
E A P+ A L + + + P+ + I+TLL RV WRY KAH T DL + L+G + +HEDFLAQ IGT E+V CK TRKARAW +L+NGG+++ NA+AFQE WY++ QFM GPRR ++ + T+ K + N +I+++++P+A D+LVV ET DV
Sbjct: 209 EEAATNNPRTAADLLRGVREQVADIDPAAEAINTLLHRVMWRYTKAHMQSTRE-DLSEGQLVGEDRLHEDFLAQ--------------------IGTLESVVCKCTRKARAWGRLSNGGYSSTNAKAFQEGFWYSMLQFMTGPRRHVSGILTIPKSDYGNPKIMRFLSPHAGGKDNLVVEETPAEDV 374
BLAST of mRNA_P-lacustris_contig101.197.1 vs. uniprot
Match: A0A6H5K4A1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4A1_9PHAE) HSP 1 Score: 123 bits (309), Expect = 3.090e-31 Identity = 74/187 (39.57%), Postives = 107/187 (57.22%), Query Frame = 2
Query: 110 ETAEVPRPQLAGLLAGLLGLLLEHVSPSVD-IDTLLRRVFWRYVKAHKSRTGHGDLED--LLGGELIHEDFLAQVATPILLFAGSDMAGLPVPEIGTHETVACKATRKARAWSKLTNGGFANANARAFQETLWYNLFQFMVGPRRTMNPMTTLSKDFFDNAEIVKYVAPYASI-DDLVVPETQEPDV 658
E A P+ A L + + + P+ + I+TLL RV WRY KAH T DL + L+G + +HEDFLAQ IGT E+V CK TRKARAW +L+NGG+++ NA+AFQE WY++ QFM GPRR ++ + T+ K + + +I+++ + + D+LVV ET DV
Sbjct: 4 EEAATNNPRTAADLLRGVREQVADIDPAAEAINTLLHRVMWRYTKAHMQSTRE-DLSEGQLVGEDRLHEDFLAQ--------------------IGTLESVVCKCTRKARAWGRLSNGGYSSTNAKAFQEGFWYSMLQFMTGPRRHVSGILTIPKSDYGHPKIMRFQSLHTGCKDNLVVEETPADDV 169
BLAST of mRNA_P-lacustris_contig101.197.1 vs. uniprot
Match: A0A6H5KA09_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA09_9PHAE) HSP 1 Score: 119 bits (299), Expect = 3.570e-29 Identity = 56/110 (50.91%), Postives = 81/110 (73.64%), Query Frame = 2
Query: 317 AQVATPILLFAGSDMAGLPVPEIGTHETVACKATRKARAWSKLTNGGFANANARAFQETLWYNLFQFMVGPRRTMNPMTTLSKDFFDNAEIVKYVAPYAS-IDDLVVPET 643
+ V TP LL A D+A LPV EIG+ E+V CK TRKARAW++L+NGG+++ NA+AFQE WY++ QFM GPRR + + T+ K + N +I+++++P+A D+LVV ET
Sbjct: 107 SSVVTPALLHAAKDIAALPVAEIGSLESVVCKCTRKARAWARLSNGGYSSTNAKAFQEKFWYSMLQFMTGPRRIASGILTIPKSDYGNPKIMRFLSPHAGGNDNLVVEET 216
BLAST of mRNA_P-lacustris_contig101.197.1 vs. uniprot
Match: A0A6H5KKM5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKM5_9PHAE) HSP 1 Score: 119 bits (299), Expect = 4.340e-29 Identity = 69/153 (45.10%), Postives = 82/153 (53.59%), Query Frame = 2
Query: 320 QVATPILLFAGSDMAGLPVPEIGTHETVACKATRKARAWSKLTNGGFANANARAFQE---------------------------------------TLWYNLFQFMVGPRRTMNPMTTLSKDFFDNAEIVKYVAPY-ASIDDLVVPETQEPDV 658
QV TP LL A +D+A LPV EIGTHET+ CK TRK+RAW KL+ GGF +ANARAFQE +LWYNLFQFM GPRR + T+ F EI++++APY D LVVPET DV
Sbjct: 7 QVVTPALLHAANDIAALPVNEIGTHETIVCKVTRKSRAWIKLSAGGFGSANARAFQERLQLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLWYNLFQFMTGPRRCTAAILTIPSSDFHKPEIMRFLAPYYVEKDSLVVPETPAADV 159 The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig101.197.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 19
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-lacustris_contig101.197.1 >prot_P-lacustris_contig101.197.1 ID=prot_P-lacustris_contig101.197.1|Name=mRNA_P-lacustris_contig101.197.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=226bp MTSQELFDAMETAEVPRPQLAGLLAGLLGLLLEHVSPSVDIDTLLRRVFWback to top mRNA from alignment at P-lacustris_contig101:182911..185780+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-lacustris_contig101.197.1 ID=mRNA_P-lacustris_contig101.197.1|Name=mRNA_P-lacustris_contig101.197.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=2870bp|location=Sequence derived from alignment at P-lacustris_contig101:182911..185780+ (Pleurocladia lacustris SAG_25_93)back to top Coding sequence (CDS) from alignment at P-lacustris_contig101:182911..185780+ >mRNA_P-lacustris_contig101.197.1 ID=mRNA_P-lacustris_contig101.197.1|Name=mRNA_P-lacustris_contig101.197.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=1356bp|location=Sequence derived from alignment at P-lacustris_contig101:182911..185780+ (Pleurocladia lacustris SAG_25_93)back to top |