mRNA_P-lacustris_contig101.196.1 (mRNA) Pleurocladia lacustris SAG_25_93

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-lacustris_contig101.196.1
Unique NamemRNA_P-lacustris_contig101.196.1
TypemRNA
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Homology
BLAST of mRNA_P-lacustris_contig101.196.1 vs. uniprot
Match: A0A6H5K9Q8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9Q8_9PHAE)

HSP 1 Score: 486 bits (1252), Expect = 5.910e-165
Identity = 270/444 (60.81%), Postives = 299/444 (67.34%), Query Frame = 2
Query:   26 MQHIVVLLFWLVPSAGLLGSWTAARPRLSQRXXXXXXXXXXXXXXXXXXSCSSTGPQTPATAGNNDESRAALVRELLELFQGEFDNYDQVVADHEAGMMPGPGGGHEHIHCSLTLLDPALVPEQLAAPPPGGRRSSSGEEGREGPEGLD----------RPLAVVAAKYYFNGDSDVVFRYRLYSFHACPPNTPGSGEDVVMRLWRLLPHVEARLRAQSYDLT-FDWSSGDDDSRQRPRRPEHGLGSETSSNQCCQANSTGGRDDVVERMFGCEIYWRRHEEGAEGGDADRGQGAGIDGATAKPA----VTARSETTPATAGWVAGSGGKSFVGLMGEDDSGTWVESQNVDGLEILVKDDLRLWADQLWVNDRGFDRQGNFVYGNQRNVPYKMRRVVAAGPLEWTLGGQHRTKEAYAEKMAAIGVIPGQRLGPLLRRATPAGAG 1312
            MQ +V+LL  +VPSAGLL SWTA+R RLSQ+                  SC+S    TP    + DE R A+V ELL+LFQGEFDNYDQVVAD +AGM PGPGGGHEHIHCSL  LDPA VP Q+AA                                RPLAVVAAKYYFNGDS+VVFRYRLYSFHACPPNTPG+  + VMRLWRLLPHVEARLRA SYDLT F WS  DDDS QR    E   GS+ +SN  C      G +DVVERMFGCEIYW RH+ G   G+ ++    GI G   + A    V  R     A     AG GGKSFVGLMG+DDSGTWVESQNVDGLEILVKDDLRLW D LWVNDRGFDR GNFVYGNQR+VPYKMRRV A GPLEWTLG +HRT++ YAEKM+AIGV  GQRL P +R A PAG G
Sbjct:    2 MQRVVLLLLQVVPSAGLLVSWTASRSRLSQKVQR---------------SCTSVDSHTPGGGLSGDEPRDAMVSELLQLFQGEFDNYDQVVADRKAGMTPGPGGGHEHIHCSLKQLDPAEVPGQVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPLAVVAAKYYFNGDSNVVFRYRLYSFHACPPNTPGARGEAVMRLWRLLPHVEARLRANSYDLTSFSWS--DDDSNQR----EPSRGSDNASNDRCSKEGRTG-NDVVERMFGCEIYWGRHQAG---GEDEKSMPGGISGPGKQDANGGAVPERGAGEDA-----AGGGGKSFVGLMGKDDSGTWVESQNVDGLEILVKDDLRLWPDSLWVNDRGFDRDGNFVYGNQRDVPYKMRRVTAGGPLEWTLGARHRTEKTYAEKMSAIGVTLGQRLRPPVRVAAPAGTG 415          
BLAST of mRNA_P-lacustris_contig101.196.1 vs. uniprot
Match: D7G1T3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1T3_ECTSI)

HSP 1 Score: 218 bits (555), Expect = 1.700e-64
Identity = 101/120 (84.17%), Postives = 109/120 (90.83%), Query Frame = 2
Query:  953 AGSGGKSFVGLMGEDDSGTWVESQNVDGLEILVKDDLRLWADQLWVNDRGFDRQGNFVYGNQRNVPYKMRRVVAAGPLEWTLGGQHRTKEAYAEKMAAIGVIPGQRLGPLLRRATPAGAG 1312
            AG GGKSFVGLMGEDDSGTWVESQNVDGLEILVKDDLRLW D+LWVNDRGFDRQGNFVYGNQR+VPYKMRRV A GPLEWTLG +HRT++ YAE+M+AIGV PGQRLGP +R A PAG G
Sbjct:   28 AGGGGKSFVGLMGEDDSGTWVESQNVDGLEILVKDDLRLWPDRLWVNDRGFDRQGNFVYGNQRDVPYKMRRVTAGGPLEWTLGARHRTEKTYAERMSAIGVTPGQRLGPPVRIAAPAGTG 147          
BLAST of mRNA_P-lacustris_contig101.196.1 vs. uniprot
Match: D7G1T2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1T2_ECTSI)

HSP 1 Score: 174 bits (442), Expect = 1.100e-47
Identity = 99/191 (51.83%), Postives = 110/191 (57.59%), Query Frame = 2
Query:   26 MQHIVVLLFWLVPSAGLLGSWTAARPRLSQRXXXXXXXXXXXXXXXXXXSCSSTGPQTPATAGNNDESRAALVRELLELFQGEFDNYDQVVADHEAGMMPGPGGGHEHIHCSLTLLDPALVPEQLAAPPPGGRRSSSGEEGREGPEGLDRPLAVVA-----------AKYYFNGDSDVVFRYRLYSFHACP 565
            MQ +V+LL  +VPSAGLL SWTAAR RLSQ+                  SC+S    TP    + DE R A+V ELL+LFQGEFDNYDQVVAD +AGM PGPGGGHEHIHCSL  LDPA VPEQ+A                                         AKYYFNGDS+VVFRYRLYSFHACP
Sbjct:    2 MQRVVLLLLQVVPSAGLLVSWTAARSRLSQKVQR---------------SCTSVDSHTPGGGLSGDEPRDAMVSELLQLFQGEFDNYDQVVADRKAGMTPGPGGGHEHIHCSLKRLDPAEVPEQVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKYYFNGDSNVVFRYRLYSFHACP 177          
BLAST of mRNA_P-lacustris_contig101.196.1 vs. uniprot
Match: K0TER5_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TER5_THAOC)

HSP 1 Score: 145 bits (365), Expect = 1.780e-34
Identity = 121/392 (30.87%), Postives = 170/392 (43.37%), Query Frame = 2
Query:  182 STGPQTPATAGNNDESRAALVRELLELFQGEFDNYDQVVADHEAGMMPGPGGGHEHIHCSLTLLDPALVPEQLAAPPPGGRRSSSGEEGREGPEGLDRPLAVVAAKYYFNGDSDVVFRYRLYSFHACPPNTPGSGEDVV-MRLWRLLPHVEARLRAQSYDLTFDWS------SGDDDSRQRPRRPEHGLGSETSSNQCCQANSTGGRDDVVERMFGCEIYWRRHEEGAEGGDADRGQGAGIDGATAKPA---VTARSETTPATAGWVAGSGGKSFVGLMGEDDSGTWVESQN-VDGLEILVKDDLRLWADQLWVNDRGFDRQGN-----------FVYGNQRNVPYKMRRVV--------------AAGPLEWTLGGQHRTKEAYAEKMAAI 1249
            ST  +T A   + D+S     R L   FQG+FDNY+QVV D + G+ PG GGGHEHIHC+L              P P       G++     EG  R    + A +YFNG+   +FR+R Y   A   +    G  VV M+L  L P +E  LR +S +    W       SG+D    + +  E  +              +     +V  + GC++ W    + A+           +D A        +T+  +T              SF   M    SG  V+S + + G  IL+KD+L LW D+ W+NDRG+D  G            FVYGN+R VPYK+ RV                +G L+WTLGG +RT   Y  K+ AI
Sbjct:   57 STIVRTIAREVDCDKSSGEYFRRLTSTFQGDFDNYNQVVLDRQHGLTPGAGGGHEHIHCTLV-------------PCP-----DFGDDA----EGDTRRSRWILAAFYFNGNPQQIFRFRAYQLWAPDHDGMDDGSAVVRMKLNTLSPILEQALRKRSEEPCSWWRTAWKVWSGED----KKKFHEDII------------PWSQFIPSLVSPLQGCDVLWEEDWDAAKHSYL-------LDNAYNSDESNDITSFCDT--------------SFHATMEAGSSGAIVDSISMIPGQRILIKDELSLWEDKFWINDRGYDPDGETDSMNENQDMPFVYGNRRGVPYKLERVSHIVSTAGAELQVAPVSGELQWTLGGSYRTPGEYEAKLKAI 389          
BLAST of mRNA_P-lacustris_contig101.196.1 vs. uniprot
Match: A0A5J4Z4Z5_PORPP (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z4Z5_PORPP)

HSP 1 Score: 143 bits (361), Expect = 3.240e-33
Identity = 108/346 (31.21%), Postives = 141/346 (40.75%), Query Frame = 2
Query:  179 SSTGPQTPATAGNNDESRAALVREL---LELFQGEFDNYDQVVADHEAGMMPGPGGGHEHIHCSLTLLDPALVPEQLAAPPPGGRRSSSGEEGREGPEGLDRPLAVVAAKYYFNGDSDVVFRYRLYSFHACPPNTPGSGEDVVMRLWRLLPHVEARLRAQSYDLT-FDWSSGDDDSRQRPRRPEHGLGSETSSNQCCQANSTGGRDDVVERMFGCEIYWRRHEEGAEGGDADRGQGAGIDGATAKPAVTARSETTPATAGWVAGSGGKSFVGLMGEDDSGTWVESQNVDGLEILVKDDLRLWADQLWVNDRGFDRQGNFVYGNQRNVPYKMRRVVAAGPLEWTLGG 1204
            S + P +P         RA   R L   +  F+G+FDNYDQV+ +   G   G GGGHEHIHC L+ +               G  SS                 ++ AKYYFNGD + V+R R+Y       +  G  E   MR++R     EARLRA  Y +   DW+                                   DD+ E + GCE++W R +                   TA+    +         G++AG G   F   M                  ILVKDDL L  ++LWVNDRGFD  G+FVYGN+R VPYKM+R      LEWT  G
Sbjct:  237 SWSSPYSPENVARRMLRRAMAQRNLDLFMTSFEGDFDNYDQVLENKRLGFTEGEGGGHEHIHCKLSRI---------------GENSS-----------------MIFAKYYFNGDPNSVYRARVYEIFLDDSDDKGVIE---MRIYRFYAETEARLRACGYRINEIDWTG----------------------------------DDLYEWLQGCEVFWERRKF-----------------KTAQALEQSEIIGPFFFRGFMAGGGCTVFSPTMKS---------------RILVKDDLILTGNELWVNDRGFDENGHFVYGNRRGVPYKMKRTSCNPHLEWTNTG 481          
BLAST of mRNA_P-lacustris_contig101.196.1 vs. uniprot
Match: B7G7Q1_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G7Q1_PHATC)

HSP 1 Score: 125 bits (314), Expect = 3.290e-28
Identity = 105/368 (28.53%), Postives = 148/368 (40.22%), Query Frame = 2
Query:  212 GNNDESRAALVRELLELFQGEFDNYDQVVADHEAGMMPGPGGGHEHIHCSLTLLDPALVPEQLAAPPPGGRRSSSGEEGREGPEGLDRPLAVVAAKYYFNGDSDVVFRYRLYSFHACPPNTPGSGEDVVMRLWRLLPHVEARLRA----QSYDLTFDWSSGDDDSRQRPRRPEHGLGSETSSNQCCQANSTGGRDDVVERMFGCEIYWR------RHEEGAEGGDADRGQGAGIDGATAKPAVTARSETTPATAGWVAGSGGKSFVGLMGEDDSGTWVESQNVDGLEILVKDDLRLWADQLWVNDRGFDRQG-NFVYGNQRNVPYKMRRV----------VAAGPLEWTLGGQHRTKEAYAEKMAAIG 1252
            GN D   A++ + LL+ FQG+FDNY+QV+ D + G++P  GGGHEHIHCSL    P     +LAA                               +YF+G    +FR+R Y         P     +   L  L P +E RLR      S+ L F+               E G+                GR  ++ +   C++ W       +H+   + G                                     G   V + GE      VESQ + G +IL+KD L LW D+LW++DRGFD     F+YGNQR VPY++ RV          +    L WTLG   R++  Y +KM A+G
Sbjct:   56 GNLD---ASVWKALLDRFQGDFDNYNQVIHDRKKGLLPREGGGHEHIHCSLV---PVSETARLAA-------------------------------FYFDGVPGAIFRFRFYDL------IPVDESTIDTVLHTLHPELERRLRRCPDPSSWPLFFE---------------EFGV---------------KGRVQLLPK---CDVRWSWVLDPVQHDYALDEGP-----------------------------------NGLHAVMVHGE----ALVESQMMPGQKILIKDQLSLWPDELWIHDRGFDPDTMRFIYGNQRGVPYRLERVTDIALNNGRTIVQEDLAWTLGPDFRSEGEYQDKMVAVG 308          
BLAST of mRNA_P-lacustris_contig101.196.1 vs. uniprot
Match: A0A7S2PZJ6_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PZJ6_9STRA)

HSP 1 Score: 122 bits (306), Expect = 2.260e-26
Identity = 105/386 (27.20%), Postives = 162/386 (41.97%), Query Frame = 2
Query:  251 LLELFQGEFDNYDQVVADHEAGMMPGPGGGHEHIHCSLTLLDPALVPEQLAAPPPGGRRSSSGEEGREGPEGLDRPLAVVAAKYYFNGDSDVVFRYRLYSFHACPPNTPGS----GEDVVMRLWRLLPHVEARLRAQSYDLTFDWSSGDDDSRQRPRRPEHGLGSETSSNQCCQANS--TGGRDDVVERMFGCEIYWRRHEEGAEGGDADRGQGAGIDGATAKPAVTARSETTPATAGWVAGSGGKSFVGLMGEDDSGTWVESQN-VDGLEILVKDDLRLWADQLWVNDRGFDRQ------------------GN--FVYGNQRNVPYKMRRV--------------VAAGP------------LEWTLGGQHRTKEAYAEKMAAI 1249
            LL  FQG+FDNY QV+ D    + P  GGGHEHIHC+L       V ++        +R ++ +               + A +YFNG+   +FR+R+Y   +   +   S    GE V M+L  L   +E +LR  S      W    D         E+    E+  N+  + N+  + G   +V  + GC++ W    +  +    +  +  G D +++   +   +      A   AGS             +G  V+S + + G  IL+KD+L LW D+ W+NDRG+D                    GN  FVYGN+R VPYK+ RV              +++ P            L WTLG   R +  Y EK+ A+
Sbjct:   63 LLSQFQGDFDNYHQVIRDRNHALAPADGGGHEHIHCTLVPCPHTAVTQE--------QRQNNDQ--------------WILAAFYFNGNPRQIFRFRMYKLISPQDDDSNSNNIDGEKVRMKLHTLSSELEQQLRQYSDQPCTWWRETYDVWLNSINEGEN----ESDDNRSNEWNTFRSEGIQHLVSPLVGCDVLWDPQWDPKKHAYLNVDE-YGNDTSSSPTTINKNNNVDGCHATMEAGS-------------AGAIVDSISLIPGKRILIKDELSLWEDEFWINDRGYDPDAVVDDNDGGGNDENEDGVGNMPFVYGNRRGVPYKLERVSCISTENTNEGSDDMSSAPPLLLERTIHKQELAWTLGDDFREQTEYEEKLRAV 408          
BLAST of mRNA_P-lacustris_contig101.196.1 vs. uniprot
Match: A0A7S4N064_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4N064_9STRA)

HSP 1 Score: 121 bits (303), Expect = 2.680e-26
Identity = 106/389 (27.25%), Postives = 148/389 (38.05%), Query Frame = 2
Query:  245 RELLELFQGEFDNYDQVVADHEAGMMPGPGGGHEHIHCSLTLLDPALVPE---QLAAPPPGGRRSSSGEEGREGPEGLDRPLAVVAAKYYFNGDSDVVFRYRLYSFHAC--------PPNTPGSGEDVVMRLWRLLPHVEARLRAQSYDLTFDWSSGDDDSRQRPRRPEHGLGSETSSNQCCQANSTGG--------RDDVVERMFGCEIYWRRHEEGAEGGDADRGQGAGIDGATAKPAVTARSETTPATAGWVAGSGGKSFVGLMGEDDSGTWVESQNVDGLEILVKDDLRLWADQLWVNDRGF-------DRQGN-----FVYGNQRNVPYKMRRV----------------------VAAGPLEWTLGGQHRTKEAYAEKMAAIG 1252
            R L+   QG+FDNY QV  D   GM+P  GGGHE +HC++  ++   +      +AAP               G EG     A V + +YF+G  + +FR+R+Y+ + C               GE   MRL+ L P VE  LRA                   P  PE   G+  +S      N  G         R      + GC++ W                         + A  AR+               ++   +M  D  G  V S    G  + V+D+L LW D+LW+NDRGF       D  GN     +VYGN+R VPY M R                       V    L WT+G   R ++ Y E+M A+G
Sbjct:   32 RTLVSRLQGDFDNYRQVERDRSEGMLPREGGGHEWMHCTVVPVEGRALEALNGAIAAP--------------RGGEGEGEADAAVLSAFYFDGVPERIFRFRMYALNYCRGGDXXXXXXXXXXXGESARMRLYTLGPSVEGPLRAA------------------PDAPERWGGALMASLLREDGNEEGXXXXXXXXPRPPPFRLLEGCDVLWTPTPH------------------RTRHAYAARNRPE------------RALHAVMTND--GAVVPSVMKPGTYLRVRDELSLWEDELWINDRGFAPECDRTDDPGNIGEDDWVYGNRRGVPYAMERAARFSTVDGDGGDDDDDAVFAREVVDAALAWTMGSSWRDEDEYCERMEAVG 356          
BLAST of mRNA_P-lacustris_contig101.196.1 vs. uniprot
Match: A0A1E7FNR9_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FNR9_9STRA)

HSP 1 Score: 111 bits (278), Expect = 1.020e-22
Identity = 102/402 (25.37%), Postives = 151/402 (37.56%), Query Frame = 2
Query:  176 CSSTGPQTPATAGNNDESRAALVRELLELFQGEFDNYDQVVADHEAGMMPGPGGGHEHIHCSLTLLDPALVPEQLAAPPPGGRRSSSGEEGREGPEGLDRPLAVVAAKYYFNGDSDVVFRYRLYSFHACP-----PNTPGSGEDVVMRLWRLLPHVEARLRAQSYDLTFDWSSGDDDSRQRPRRPEHGLGSETSSNQCCQANSTGGRDDVVERMFGCEIYWRRHEE-------GAEGGDADRGQGAGIDGATAKPAVTARSETTPATAGWVAGSGGKSFVGLMGEDDSGTWVESQNVDGLEILVKDDLRLWADQLWVNDRGFDR-QGNFVYGNQRNVPYKMRRVVAAGP------------------------------LEWTLGGQHRTKEAYAEKMAAIG 1252
            C ST        G+ + S   + + L E FQG+FDNY QVV D + G++P  GGGHEH HC+L    P     +LAA                               ++F+G+ + +FR+R Y            +   +   V MRL  L P +E  L++ S D    W           +  +H   S  SS        +  ++  V  +  CEI W   ++        ++ G  D  +   +       AV    E                             V S  V G++I + D L L+    ++NDRGFD   G F+YGNQR++PY++ RV    P                              LEWT+G ++RT E Y  K+  IG
Sbjct:   71 CESTSSVDGVGDGDGESSHEKVTKILSEWFQGDFDNYAQVVEDRKNGLLPREGGGHEHFHCTLV---PVTESTRLAA-------------------------------FFFDGNPNRIFRFRYYELLTPTIINDVDHQHSNNVTVEMRLNTLHPELEQLLKSHSTD-PLSWPD-------IFKNFQHEGVSSNSSXXXXXXXXSDEKNQKVIPLSKCEIVWSFDKDPIQHSYISSDDGKDDEAENMSLH------AVMVHGEQV---------------------------VNSTIVPGMQIRILDQLSLYQHVFYINDRGFDPITGAFIYGNQRDIPYRLERVSNILPSATSAADXXXXXXSTADRRERLQLEVINPELEWTIGPKYRTIEEYDSKLKVIG 397          
BLAST of mRNA_P-lacustris_contig101.196.1 vs. uniprot
Match: A0A7R9ZKH3_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZKH3_9STRA)

HSP 1 Score: 103 bits (256), Expect = 3.630e-20
Identity = 100/389 (25.71%), Postives = 146/389 (37.53%), Query Frame = 2
Query:  206 TAGNNDESRAALVRELLELFQGEFDNYDQVVADHEAGMM-PGPGGGHEHIHCSLTLLDPALVPEQLAAPPPGGRRSSSGEEGREGPEGLDRPLAVVAAKYYFNGDSDVVFRYRLYSFHACPPNTPGSGEDVVMRLWRLLPHVEARLRAQSYDLTFDWSSGDDDSRQRPRRPEHGLGSETSSNQCCQANSTGGRDDVVERMFGCEIYWRRHEEGAEGGDADRGQGAGIDGATAKPAVTARSETTPATAGWVAGSGGKSFVGLMGEDDSGTWVESQNVDGLEILVKDDLRLWADQLWVNDRGFDRQGN-FVYGNQRNVPYKMRRV-------------------------VAAGPLEWTLGGQHRTKEAYAEKMAAIGVIPGQRLGPLLRR 1291
            T+    +  A + R    LFQG+FDNY+QV+ D E G + P  GG HEHIHC+L    P     +LAA                               +YF G    +FR+R Y              D  M+L+ + PH+  +L+A+   +   W S    + Q  R                          ++  +  C+I W    +  +    D                 A +E   A             + + G+      VESQ + G +I + D L L+ D  ++NDRGF+ + N ++YGNQR+VPY++ RV                         V    L WTLG  HRT E Y  K+  IG       GP+ RR
Sbjct:   83 TSTAQTDETATIQRLFQTLFQGDFDNYNQVLQDREDGYLTPREGGQHEHIHCTLV---PITETSRLAA-------------------------------FYFEGQPQRIFRFRYYELQP----------DCCMKLYTVAPHIFQKLQAE---VGGRWKSIFHRALQNDR-------------------------SILTELPKCDIAWSVARDAVQHAYLDDDHD------------DADTECMHA-------------IMVHGQ----AIVESQMMPGQKIKILDQLSLYDDVFYINDRGFNPETNEYIYGNQRSVPYRLERVAKWKGGDADEDNDADDSVVTMVGRDVVNESLAWTLGDAHRTPEEYKSKIDEIG-------GPMKRR 363          
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig101.196.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K9Q8_9PHAE5.910e-16560.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G1T3_ECTSI1.700e-6484.17Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G1T2_ECTSI1.100e-4751.83Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
K0TER5_THAOC1.780e-3430.87Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A5J4Z4Z5_PORPP3.240e-3331.21Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
B7G7Q1_PHATC3.290e-2828.53Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A7S2PZJ6_9STRA2.260e-2627.20Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A7S4N064_9STRA2.680e-2627.25Hypothetical protein n=2 Tax=Odontella aurita TaxI... [more]
A0A1E7FNR9_9STRA1.020e-2225.37Uncharacterized protein n=1 Tax=Fragilariopsis cyl... [more]
A0A7R9ZKH3_9STRA3.630e-2025.71Hypothetical protein n=1 Tax=Craspedostauros austr... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig101contigP-lacustris_contig101:177369..182262 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score215.3
Seed ortholog evalue5.5e-53
Seed eggNOG ortholog2880.D7G1T3
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.CpeT/CpcT family (DUF1001)
EggNOG OGs2CBDP@1,2SAUK@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons4
Model size1856
Cds size1293
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig101.196.1prot_P-lacustris_contig101.196.1Pleurocladia lacustris SAG_25_93polypeptideP-lacustris_contig101 177907..182237 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815278.9195302-UTR-P-lacustris_contig101:177368..1779061622815278.9195302-UTR-P-lacustris_contig101:177368..177906Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig101 177369..177906 -
1693493446.671898-UTR-P-lacustris_contig101:177368..1779061693493446.671898-UTR-P-lacustris_contig101:177368..177906Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig101 177369..177906 -
1622815278.975786-UTR-P-lacustris_contig101:182237..1822621622815278.975786-UTR-P-lacustris_contig101:182237..182262Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig101 182238..182262 -
1693493446.7511575-UTR-P-lacustris_contig101:182237..1822621693493446.7511575-UTR-P-lacustris_contig101:182237..182262Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig101 182238..182262 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815278.9311874-CDS-P-lacustris_contig101:177906..1786591622815278.9311874-CDS-P-lacustris_contig101:177906..178659Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig101 177907..178659 -
1693493446.7003136-CDS-P-lacustris_contig101:177906..1786591693493446.7003136-CDS-P-lacustris_contig101:177906..178659Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig101 177907..178659 -
1622815278.9427447-CDS-P-lacustris_contig101:179406..1796791622815278.9427447-CDS-P-lacustris_contig101:179406..179679Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig101 179407..179679 -
1693493446.7162566-CDS-P-lacustris_contig101:179406..1796791693493446.7162566-CDS-P-lacustris_contig101:179406..179679Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig101 179407..179679 -
1622815278.9535508-CDS-P-lacustris_contig101:180321..1804501622815278.9535508-CDS-P-lacustris_contig101:180321..180450Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig101 180322..180450 -
1693493446.7276306-CDS-P-lacustris_contig101:180321..1804501693493446.7276306-CDS-P-lacustris_contig101:180321..180450Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig101 180322..180450 -
1622815278.9653203-CDS-P-lacustris_contig101:182099..1822371622815278.9653203-CDS-P-lacustris_contig101:182099..182237Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig101 182100..182237 -
1693493446.7384636-CDS-P-lacustris_contig101:182099..1822371693493446.7384636-CDS-P-lacustris_contig101:182099..182237Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig101 182100..182237 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-lacustris_contig101.196.1

>prot_P-lacustris_contig101.196.1 ID=prot_P-lacustris_contig101.196.1|Name=mRNA_P-lacustris_contig101.196.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=431bp
MQHIVVLLFWLVPSAGLLGSWTAARPRLSQRLLGSWTAARPRLSQRVRRS
CSSTGPQTPATAGNNDESRAALVRELLELFQGEFDNYDQVVADHEAGMMP
GPGGGHEHIHCSLTLLDPALVPEQLAAPPPGGRRSSSGEEGREGPEGLDR
PLAVVAAKYYFNGDSDVVFRYRLYSFHACPPNTPGSGEDVVMRLWRLLPH
VEARLRAQSYDLTFDWSSGDDDSRQRPRRPEHGLGSETSSNQCCQANSTG
GRDDVVERMFGCEIYWRRHEEGAEGGDADRGQGAGIDGATAKPAVTARSE
TTPATAGWVAGSGGKSFVGLMGEDDSGTWVESQNVDGLEILVKDDLRLWA
DQLWVNDRGFDRQGNFVYGNQRNVPYKMRRVVAAGPLEWTLGGQHRTKEA
YAEKMAAIGVIPGQRLGPLLRRATPAGAGS*
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mRNA from alignment at P-lacustris_contig101:177369..182262-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-lacustris_contig101.196.1 ID=mRNA_P-lacustris_contig101.196.1|Name=mRNA_P-lacustris_contig101.196.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=4894bp|location=Sequence derived from alignment at P-lacustris_contig101:177369..182262- (Pleurocladia lacustris SAG_25_93)
AGTACCGTCCTTCGATGCAGCAGTGATGCAGCACATCGTGGTGCTGCTAT TTTGGCTTGTCCCTTCTGCTGGCCTGCTCGGCTCTTGGACGGCTGCAAGA CCTCGCTTGTCACAACGGCTGCTCGGCTCTTGGACGGCTGCAAGGCCTCG CTTGTCACAACGCGTGAGTTCGAGTGAACTGCCTGATCCCCTGGTCTCAG CATTTATTTCTAGGACAAGCTACAGCAACTGCTGCTGCTGTTGCATGCTT TTGTGCATTGGCTGGTGGACCACATGACAACAGCACGGCCTCACACCTGT TTCCTCCCAGCTTTTTTGCTCTCTGCATATATCCCTCGCCGATTGCTGCG TTTTTCACACTTCGATGGATCGTGCATGTACTGCTGCTGCCTCCGCCGCT GTTGTACGTATTAGCAGCCAACGGATGGGACAAAAGTGTTTACAGTAGTA TTTACTACTGTACGCCAAAGCCGAACGTTGCGATTCAAAAGGTGTGGTAG CCAGGGTCCTCAAGACGTTGTTGATCGTAGGATGTATTTATCTGGCTTGG CCACCTCCCTCTTGGAAAAATAGCATGCGTGACTCGATCTACAGCAGTAT ACAGAGTAGTAGTGGATCGACAACAGTCGTAGTAGAGATGGATGGGGGTG GTATCCATTTCCCATGTATGTCACGGCTTGACCTCGGTTGGCGCCTCTGC CAGAGCTGCCATCTGCCTCACCTCCGTCTAGAAAACATCCCCGATGGCGA ATTTCCGAGGGGGTGCGGAGCATGAGTACCTGATACAAGTTGGGCCGAAC AGGAACACCTCAAAATGCCTGTCAGGGATTTCCCACGCGGTTTTCCCTGA AATTTTGACACAAGCTTCATATGAGCGAAACAAAACGATGTGTTTCAATT CCAATTGTTTTTTTTTTTGTTTTCGTGAGCTAGCCTCGAAACGAAGAATT CCTTAAACACTAATATCAGGCTAGCTCACGAAAAAAAACAAAAAAACAAT TGGACTTGAAAGACATCGTTCTGTTTTGCTCATATGAAGCTCGTGTCAAA ATTTCAGGGTCTGAATCGAAAAAACCGCGTGGGAAATCCAGAATTGCATT CGGTCGCAGGACCTGGCTGCAGGGACAGAGAATGTATGGGAATTAGAGTG CTCACAGACCGTAGAAACCGAGACGAAAGCTGTGCGATTTAGAAGGAGCC GCATTGGCGTTGGCTGCCCACGAACGACGTATATGGGCACACCCATTGTG CGTGATGATGGGGTGACGCAGAAAAAGGTTCATCCAAAGCGCATGACCGC AAACACTCACATCATCGTGTGTGTGGGTCAGACGTGACGTGGTGAGAAAA AAGTTTTACAATTGTCCTGCTGTAGCACGTGCCGTGGGATATTTTGCGCC CAACAGTCACGTGCGCACAAAACACACACATGCTGATGGGGACAGACGTC TTCTCCAACTGGTCTGTGGTTGCAGGAGGGCGGCTAGGCGTCATGTTGAC GCTCCTTGTTCGAGTGTGTATTTTCGTATTTTCGATTTTTTTCCCGCCGC CGGAAAAAAAACGTTTCATAATTTTCCACAACTCAAAGACCTATATGAAA TGCGGCGGGTATGTACTTCGTTTGCGGGAAGGTGTCCCAACAGGCCATCA GAAAGATGTGCAGATCCGCTGTGATTGGGCAATTCAGTCGATATGCAGAA CGTGGTTCAGTTCTTTTTCCTTGAAAAGTTATGACTTGACGAATAGGAAC TGTGTTCTAGGCCGGCCCAGCTTGTACTTCCGCGTGTACTGCTGTTGCCT GATGATGTACAGGTGCGACGATCATGTTCCAGCACTGGTCCTCAGACTCC CGCAACGGCTGGCAACAATGACGAATCTCGAGCTGCGCTGGTACGCGAGC TGCTGGAGCTATTCCAGGGGGAATTTGACAACTATGATCAGGTGGGGAGA AGTTGGTCTGACCCTTCCATTTTTGTCATTTCGGCAAAGACGATCGGGGA GTCGCTGGTAGACCCGTACATACGTTAGTGTTGTCATTTCAACCTGCGTT GCGCGATATTGCCGTTGATGTCGCCATTGGCCCCAATCGTGAAAGTGTTG TTGCACCCGGTCCATTTATCGCAGCGCCATTTATCGCAGCGCATCCAGTA GACGCATTAGTCTCTCCCACCGTTTGTGAACAGGAGACAGCCTTATTTCT TATGGGAGTCCAAAACCCATGTTGTTCTCGAGATGTATGCATATGTGCAC CCTCATCTTCACCTCTCGACTGCTGCACCAAGCTACCCTTCTCTATGCCG AACAGAGTGGCTTGTTGAAAAAACTACACGATCCCAGGGTGTCGCGCATA GACACTCCCTGGTATATACTTGTCCAGAAGATCGTCGACCAAGCTGGTCG TGACTACCGTTGGTACCGAAGCAGCCGGTCTACCCAGCTGCCGAGACCCT TCCTTCGATGGCTCCTCAAGGAGTTTCCCGTCACACAAACGGTGCGTCGG TGCGGCAACAGCTGGTCGCCACACCACCAGTAGAAGCAGAAACCAACCAC CTCCTTTTGGACTAACCGGAAATCAATGCGCAGGTAGTTGCAGATCATGA GGCTGGGATGATGCCTGGGCCTGGCGGAGGCCACGAGCACATTCACTGCA GCTTAACGCTGCTGGACCCTGCCCTGGTCCCCGAGCAACTCGCCGCACCA CCACCAGGCGGAAGGAGGTCCAGCAGCGGGGAGGAAGGGAGGGAGGGGCC GGAGGGGCTAGACCGGCCCTTGGCGGTGGTTGCGGCGAAGTACTATTTCA ACGGCGACTCGGACGTGGTGTTTCGGTATCGCCTGTACAGCTTTCATGCG TGTCCGGTGAGAAACAGGCCGGTGGTGGAAAAGGGCGCTGGGAAGGGAGG GGGGTGCGGAGATGTGTTGGTGCTTTTTTAATTCGCTCACGATTCACCCT TTCGTCAGATCGTCGGTTCCGTTCCTGCTATTCGTTCCTTATGCAGTCGA TCCCTCTTTTGTGTACGTGCCTTCTAAGGACAACTTTACTAAGGATGCAC TTGTTTCAGAAGCAGCGGGCACGCAGAATATGTAAAGAGCACAGTGCATT GTAGTGCGTATCGAACGGGCCTCCATATCCTCGGGGCTGAGACCAAACGC GTTCTATTGCTTATTCAGATTGCGTGGTCTGAAAACATGTAGTTTGATGA TAACCACGGGTTGTTATGCTGTCCTATTGTGTTCCGACTCGTTTGCGAAG GGCGTGTGGTTCGAATTATTAAACACCTCTGTTGACACTGAGGATGATGA GTTGTCGACCTGAACGAAAGTTGAGAACACTTTCCCTCGGTCAAGGACTC GTGAAAACATCGAAAACCATGTGCTGCGTCCTTTGTAGAAGTTCGACTCA ACTGCACGGCCTGTTTGTCTCTGTATTGTCCGTCGAGCGGTATAATTTTC CGATCGAAGGAAGGTATCATTGCTGTTGAGCAAGCACAACCCGTTTTTTC ACATGAACATGCGTATCACCTAGATATACACGTGGATTGCAGCACTCTGC AGGAGCGTCTCACATCCCCGGGCCTTTGATCCATTGCGTCCACCATTCGG CAGCCGAATACGCCGGGCTCGGGAGAGGACGTGGTCATGCGTCTCTGGAG ACTGCTCCCGCACGTCGAAGCACGCCTACGGGCCCAGAGCTACGACCTCA CGTTTGACTGGTCCAGCGGTGATGATGACAGCCGACAGCGCCCACGGCGA CCGGAACATGGATTGGGTAGTGAAACCAGCAGTAATCAGTGCTGTCAAGC CAATAGCACGGGAGGTCGGGACGACGTCGTGGAGCGCATGTTTGGGTGCG AGATCTACTGGAGGCGACATGAAGAGGGCGCCGAGGGCGGTGACGCGGAT CGGGGGCAGGGAGCGGGAATTGACGGTGCGACGGCAAAACCAGCCGTAAC GGCAAGGTCCGAAACAACACCAGCAACAGCGGGTTGGGTAGCAGGGTCCG GTGGGAAGTCCTTCGTGGGCTTGATGGGCGAGGACGACAGCGGCACGTGG GTCGAGTCGCAGAACGTGGACGGTCTCGAGATTCTCGTCAAGGACGACCT CAGGCTGTGGGCGGACCAACTGTGGGTCAACGACCGTGGCTTCGACCGCC AGGGAAATTTCGTCTACGGCAACCAGCGAAACGTGCCCTACAAAATGCGC AGGGTCGTCGCCGCGGGGCCGTTGGAGTGGACGTTGGGGGGGCAGCACCG AACAAAGGAAGCGTACGCCGAAAAAATGGCGGCCATTGGGGTGATCCCGG GGCAGCGCCTCGGACCACTCCTTCGCCGAGCCACACCGGCCGGCGCGGGG AGTTAGGTCATGAATATGTTCACCTATCGCTTTTCGGCCTAGCAGTCCGT GTTTACGTTTTGAGCAGATACGTTGAAAATGTTCAGCGTTGACAGTGATG CACAGAGTAATCTTTTGGGCACTTGTGACTTCTTTGCAATCTTAATCTTG TTTTTCGGCGAAACAAGCACTCCTCTCGTCTATATATTCTACGCATGCCT GATTTCTGGTTCGGTGATGTAATGGGTACGTGGCGTTTGCCAGGCATTGG TTTCGAAACGAGGAAACCGCTATTATTGGCGTAGCAACCTTGTCTGTGCA AGTTAGAGCGGACGAACCGCTTCATGGGAGCAACCTGGAGCAGTTTAGAA CACTGAGCACGAGGATCAACGCTGCAACACAGCACCCCCAAGCTAAGTCA GGGCTTCCCGAGGACGACAGAATCAAAGTGCTCCGTCGATTTGCCGTGCC ACCGACGAAGCAGATCGTCGTGTGCATAGTTCCACGGGTTTTCACGGGAG CTCTTGCAAGCCACGAGGAAATGAGAAAGAGTTCGGAATCCTGC
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Coding sequence (CDS) from alignment at P-lacustris_contig101:177369..182262-

>mRNA_P-lacustris_contig101.196.1 ID=mRNA_P-lacustris_contig101.196.1|Name=mRNA_P-lacustris_contig101.196.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=2586bp|location=Sequence derived from alignment at P-lacustris_contig101:177369..182262- (Pleurocladia lacustris SAG_25_93)
ATGCAGCACATCGTGGTGCTGCTATTTTGGCTTGTCCCTTCTGCTGGCCT
GCTCGGCTCTTGGACGGCTGCAAGACCTCGCTTGTCACAACGGCTGCTCG
GCTCTTGGACGGCTGCAAGGCCTCGCTTGTCACAACGCATGCAGCACATC
GTGGTGCTGCTATTTTGGCTTGTCCCTTCTGCTGGCCTGCTCGGCTCTTG
GACGGCTGCAAGACCTCGCTTGTCACAACGGCTGCTCGGCTCTTGGACGG
CTGCAAGGCCTCGCTTGTCACAACGCGTGCGACGATCATGTTCCAGCACT
GGTCCTCAGACTCCCGCAACGGCTGGCAACAATGACGAATCTCGAGCTGC
GCTGGTACGCGAGCTGCTGGAGCTATTCCAGGGGGAATTTGACAACTATG
ATCAGGTGCGACGATCATGTTCCAGCACTGGTCCTCAGACTCCCGCAACG
GCTGGCAACAATGACGAATCTCGAGCTGCGCTGGTACGCGAGCTGCTGGA
GCTATTCCAGGGGGAATTTGACAACTATGATCAGGTAGTTGCAGATCATG
AGGCTGGGATGATGCCTGGGCCTGGCGGAGGCCACGAGCACATTCACTGC
AGCTTAACGCTGCTGGACCCTGCCCTGGTCCCCGAGCAACTCGCCGCACC
ACCACCAGGCGGAAGGAGGTCCAGCAGCGGGGAGGAAGGGAGGGAGGGGC
CGGAGGGGCTAGACCGGCCCTTGGCGGTGGTTGCGGCGAAGTACTATTTC
AACGGCGACTCGGACGTGGTGTTTCGGTATCGCCTGTACAGCTTTCATGC
GTGTCCGGTAGTTGCAGATCATGAGGCTGGGATGATGCCTGGGCCTGGCG
GAGGCCACGAGCACATTCACTGCAGCTTAACGCTGCTGGACCCTGCCCTG
GTCCCCGAGCAACTCGCCGCACCACCACCAGGCGGAAGGAGGTCCAGCAG
CGGGGAGGAAGGGAGGGAGGGGCCGGAGGGGCTAGACCGGCCCTTGGCGG
TGGTTGCGGCGAAGTACTATTTCAACGGCGACTCGGACGTGGTGTTTCGG
TATCGCCTGTACAGCTTTCATGCGTGTCCGCCGAATACGCCGGGCTCGGG
AGAGGACGTGGTCATGCGTCTCTGGAGACTGCTCCCGCACGTCGAAGCAC
GCCTACGGGCCCAGAGCTACGACCTCACGTTTGACTGGTCCAGCGGTGAT
GATGACAGCCGACAGCGCCCACGGCGACCGGAACATGGATTGGGTAGTGA
AACCAGCAGTAATCAGTGCTGTCAAGCCAATAGCACGGGAGGTCGGGACG
ACGTCGTGGAGCGCATGTTTGGGTGCGAGATCTACTGGAGGCGACATGAA
GAGGGCGCCGAGGGCGGTGACGCGGATCGGGGGCAGGGAGCGGGAATTGA
CGGTGCGACGGCAAAACCAGCCGTAACGGCAAGGTCCGAAACAACACCAG
CAACAGCGGGTTGGGTAGCAGGGTCCGGTGGGAAGTCCTTCGTGGGCTTG
ATGGGCGAGGACGACAGCGGCACGTGGGTCGAGTCGCAGAACGTGGACGG
TCTCGAGATTCTCGTCAAGGACGACCTCAGGCTGTGGGCGGACCAACTGT
GGGTCAACGACCGTGGCTTCGACCGCCAGGGAAATTTCGTCTACGGCAAC
CAGCGAAACGTGCCCTACAAAATGCGCAGGGTCGTCGCCGCGGGGCCGTT
GGAGTGGACGTTGGGGGGGCAGCACCGAACAAAGGAAGCGTACGCCGAAA
AAATGGCGGCCATTGGGGTGATCCCGGGGCAGCGCCTCGGACCACTCCTT
CGCCGAGCCACACCGGCCGGCGCGGGGAGTTAGCCGAATACGCCGGGCTC
GGGAGAGGACGTGGTCATGCGTCTCTGGAGACTGCTCCCGCACGTCGAAG
CACGCCTACGGGCCCAGAGCTACGACCTCACGTTTGACTGGTCCAGCGGT
GATGATGACAGCCGACAGCGCCCACGGCGACCGGAACATGGATTGGGTAG
TGAAACCAGCAGTAATCAGTGCTGTCAAGCCAATAGCACGGGAGGTCGGG
ACGACGTCGTGGAGCGCATGTTTGGGTGCGAGATCTACTGGAGGCGACAT
GAAGAGGGCGCCGAGGGCGGTGACGCGGATCGGGGGCAGGGAGCGGGAAT
TGACGGTGCGACGGCAAAACCAGCCGTAACGGCAAGGTCCGAAACAACAC
CAGCAACAGCGGGTTGGGTAGCAGGGTCCGGTGGGAAGTCCTTCGTGGGC
TTGATGGGCGAGGACGACAGCGGCACGTGGGTCGAGTCGCAGAACGTGGA
CGGTCTCGAGATTCTCGTCAAGGACGACCTCAGGCTGTGGGCGGACCAAC
TGTGGGTCAACGACCGTGGCTTCGACCGCCAGGGAAATTTCGTCTACGGC
AACCAGCGAAACGTGCCCTACAAAATGCGCAGGGTCGTCGCCGCGGGGCC
GTTGGAGTGGACGTTGGGGGGGCAGCACCGAACAAAGGAAGCGTACGCCG
AAAAAATGGCGGCCATTGGGGTGATCCCGGGGCAGCGCCTCGGACCACTC
CTTCGCCGAGCCACACCGGCCGGCGCGGGGAGTTAG
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