Homology
BLAST of mRNA_P-lacustris_contig1009.177.1 vs. uniprot
Match:
A0A6H5J9P0_9PHAE (Oxidoreductase-like domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9P0_9PHAE)
HSP 1 Score: 115 bits (289), Expect = 2.220e-25
Identity = 103/191 (53.93%), Postives = 114/191 (59.69%), Query Frame = 1
Query: 205 RLTRARASSRAEETQ-----RREYHRWSPAG--EMGATNDTLLNFEGEAGPRHQPEQPP-------AKPKPQSKSPQAVAMEEFSALERKLSPSGVXXXXXXXXXXXXXXXXXXXXXXGSTATVTTAAAGAYQSYQSLGSSGLSKAPSKRPEEPAAEECCGNGCSTCVWIGYWEELQAWEEAGREREEAPP 735
R RARAS A++ RR YHRWSP G + + + TLLN E KP P K PQAVAMEEF+ LERKL+ XXXXXXXXXXXXXXXXXXXXX + AA Q G S + +PEEP AEECCGNGC+TCVWIGYWEELQAWEEA REREEAPP
Sbjct: 43 RSPRARASGPAKQGPGAVQCRRRYHRWSPPGATDTNSGSGTLLNMAVEKXXXXXXXXXXXXXXXXXTKPPPLLKVPQAVAMEEFADLERKLASPREAXXXXXXXXXXXXXXXXXXXXXXXXQQASAGAA------QPDGQSSRVRNTLTKPEEPEAEECCGNGCATCVWIGYWEELQAWEEAEREREEAPP 227
BLAST of mRNA_P-lacustris_contig1009.177.1 vs. uniprot
Match:
D7FV34_ECTSI (Oxidoreductase-like domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV34_ECTSI)
HSP 1 Score: 110 bits (276), Expect = 1.200e-23
Identity = 96/198 (48.48%), Postives = 108/198 (54.55%), Query Frame = 1
Query: 205 RLTRARASSRAEETQ-----RREYHRWSPAGEMGATNDTLLNFEGEAGP----------------RHQPEQPPAKPKPQSKSPQAVAMEEFSALERKLSPSGVXXXXXXXXXXXXXXXXXXXXXXGSTATVTTAAAGAYQSYQSLGSSGLSKAPSKRPEEPAAEECCGNGCSTCVWIGYWEELQAWEEAGREREEAPP 735
R +RARAS AE+ RR YH WSP G + + +P PP KSPQAVAMEEF+ LERKL+ XXXXXXXXXXXXXXXXXX + A Q +G S + +PEEP AEECCGNGC+TCVWIGYWEELQAWEEAGREREEAPP
Sbjct: 43 RSSRARASGPAEQGLGAVQCRRRYHHWSPPGATDTNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXQTKPALPP-------KSPQAVAMEEFADLERKLASPREAPRRXXXXXXXXXXXXXXXXXXXXXQQASAGGA------QPVGQSSRLRNTLTKPEEPEAEECCGNGCATCVWIGYWEELQAWEEAGREREEAPP 227
BLAST of mRNA_P-lacustris_contig1009.177.1 vs. uniprot
Match:
UPI0009775C97 (hypothetical protein n=1 Tax=Motiliproteus sp. MSK22-1 TaxID=1897630 RepID=UPI0009775C97)
HSP 1 Score: 53.5 bits (127), Expect = 1.300e-5
Identity = 19/44 (43.18%), Postives = 26/44 (59.09%), Query Frame = 1
Query: 604 SKRPEEPAAEECCGNGCSTCVWIGYWEELQAWEEAGREREEAPP 735
S +P P ECCG GCS CVW Y+E+L+ W+E + + P
Sbjct: 5 SAKPNRPEEHECCGGGCSPCVWDFYYEDLERWKEQQKNDQNESP 48
BLAST of mRNA_P-lacustris_contig1009.177.1 vs. uniprot
Match:
W8X920_CASDE (Oxidoreductase-like domain-containing protein n=1 Tax=Castellaniella defragrans 65Phen TaxID=1437824 RepID=W8X920_CASDE)
HSP 1 Score: 51.6 bits (122), Expect = 8.740e-5
Identity = 20/40 (50.00%), Postives = 28/40 (70.00%), Query Frame = 1
Query: 607 KRPEEPAAEECCGNGCSTCVWIGYWEELQAWEEAGREREE 726
+ P EP ECCGNGC+ CV+ Y EE +AW++A ++ EE
Sbjct: 14 EEPVEPDLNECCGNGCTPCVFDTYAEERRAWQQAVKDWEE 53
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig1009.177.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 4
0 1 Expect = 2.22e-25 / Id = 53.93 Expect = 1.20e-23 / Id = 48.48 Expect = 1.30e-5 / Id = 43.18 Expect = 8.74e-5 / Id = 50.00 Sequence A0A6H5J9P0_9PHAE D7FV34_ECTSI UPI0009775C97 W8X920_CASDE
Match Name E-value Identity Description
A0A6H5J9P0_9PHAE 2.220e-25 53.93 Oxidoreductase-like domain-containing protein n=1 ... [more] D7FV34_ECTSI 1.200e-23 48.48 Oxidoreductase-like domain-containing protein n=1 ... [more] UPI0009775C97 1.300e-5 43.18 hypothetical protein n=1 Tax=Motiliproteus sp. MSK... [more] W8X920_CASDE 8.740e-5 50.00 Oxidoreductase-like domain-containing protein n=1 ... [more]
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Hectar predicted targeting category mitochondrion Ec32 ortholog description Oxidoreductase-like, N-terminal Ec32 ortholog Ec-12_005000.1 Exons 4 Model size 3044 Cds size 642 Stop 1 Start 1
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622815276.1427968-UTR-P-lacustris_contig1009:61683..61779 1622815276.1427968-UTR-P-lacustris_contig1009:61683..61779 Pleurocladia lacustris SAG_25_93 UTR P-lacustris_contig1009 61684..61779 + 1693493444.5810168-UTR-P-lacustris_contig1009:61683..61779 1693493444.5810168-UTR-P-lacustris_contig1009:61683..61779 Pleurocladia lacustris SAG_25_93 UTR P-lacustris_contig1009 61684..61779 + 1622815276.1901643-UTR-P-lacustris_contig1009:63570..64847 1622815276.1901643-UTR-P-lacustris_contig1009:63570..64847 Pleurocladia lacustris SAG_25_93 UTR P-lacustris_contig1009 63571..64847 + 1693493444.6239355-UTR-P-lacustris_contig1009:63570..64847 1693493444.6239355-UTR-P-lacustris_contig1009:63570..64847 Pleurocladia lacustris SAG_25_93 UTR P-lacustris_contig1009 63571..64847 + 1622815276.2019935-UTR-P-lacustris_contig1009:65317..66346 1622815276.2019935-UTR-P-lacustris_contig1009:65317..66346 Pleurocladia lacustris SAG_25_93 UTR P-lacustris_contig1009 65318..66346 + 1693493444.6326277-UTR-P-lacustris_contig1009:65317..66346 1693493444.6326277-UTR-P-lacustris_contig1009:65317..66346 Pleurocladia lacustris SAG_25_93 UTR P-lacustris_contig1009 65318..66346 +
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622815276.151711-CDS-P-lacustris_contig1009:61779..62301 1622815276.151711-CDS-P-lacustris_contig1009:61779..62301 Pleurocladia lacustris SAG_25_93 CDS P-lacustris_contig1009 61780..62301 + 1693493444.592265-CDS-P-lacustris_contig1009:61779..62301 1693493444.592265-CDS-P-lacustris_contig1009:61779..62301 Pleurocladia lacustris SAG_25_93 CDS P-lacustris_contig1009 61780..62301 + 1622815276.1630633-CDS-P-lacustris_contig1009:63185..63247 1622815276.1630633-CDS-P-lacustris_contig1009:63185..63247 Pleurocladia lacustris SAG_25_93 CDS P-lacustris_contig1009 63186..63247 + 1693493444.6062446-CDS-P-lacustris_contig1009:63185..63247 1693493444.6062446-CDS-P-lacustris_contig1009:63185..63247 Pleurocladia lacustris SAG_25_93 CDS P-lacustris_contig1009 63186..63247 + 1622815276.1785676-CDS-P-lacustris_contig1009:63512..63570 1622815276.1785676-CDS-P-lacustris_contig1009:63512..63570 Pleurocladia lacustris SAG_25_93 CDS P-lacustris_contig1009 63513..63570 + 1693493444.6152372-CDS-P-lacustris_contig1009:63512..63570 1693493444.6152372-CDS-P-lacustris_contig1009:63512..63570 Pleurocladia lacustris SAG_25_93 CDS P-lacustris_contig1009 63513..63570 +
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-lacustris_contig1009.177.1
>prot_P-lacustris_contig1009.177.1 ID=prot_P-lacustris_contig1009.177.1|Name=mRNA_P-lacustris_contig1009.177.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=214bp
MAFSIRFGSFAAQTCTSCPLSASCASSCRRLAEMKGRLTRARASSRAEET back to top mRNA from alignment at P-lacustris_contig1009:61684..66346+
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-lacustris_contig1009.177.1 ID=mRNA_P-lacustris_contig1009.177.1|Name=mRNA_P-lacustris_contig1009.177.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=4663bp|location=Sequence derived from alignment at P-lacustris_contig1009:61684..66346+ (Pleurocladia lacustris SAG_25_93)GAGAGAGAAACAACCAGCGAGAGAGAGAGAGAGAGAGAGAGAGAGGCGCA
GAGGCTGGAACGGGTTTGTTGTCACTGGGTGTCAATTTATTCGTCG ATGG
CCTTCAGCATTCGTTTCGGATCCTTTGCTGCCCAAACCTGCACATCTTGT
CCTCTGTCGGCCTCTTGTGCTTCTTCATGCCGTCGTCTGGCGGAGATGAA
GGGTCGATTAACCCGCGCAAGAGCGAGTAGTCGAGCCGAGGAGACGCAGC
GGAGGGAGTATCATCGATGGTCACCTGCTGGGGAAATGGGCGCAACGAAC
GACACCCTGTTGAACTTTGAAGGCGAAGCGGGACCACGCCACCAACCCGA
GCAGCCGCCAGCAAAACCAAAGCCGCAGTCGAAGTCTCCCCAGGCCGTGG
CAATGGAGGAGTTCTCCGCTTTGGAGCGCAAGCTTTCCCCGTCGGGCGTT
GAACCGATGAGAAGGACTCCGGAGCAAGTCGCGATGGAGGAGTTCGCTGC
TCTTGAGCGAAAGCTTGGCTCGACAGCGACAGTCACAACAGCAGCAGCAG
GCGCCTATCAATCCTATCAATCCCTCGGGTCAAGTGGTTTGAGCAAGGCT
CCTTCGAAAAGACCTGAG GTCAGTTCGGACTCTCTCGGTATTTGAACGTA
CTCAATAACGTGTTGGCTTACTCTTTCGAGGGTACTTCGGAGGTTGCCAT
ACCATCGTCAACGTTAGTTCGAATTTGACATAAGTTGATTTGAGCTTAGG
AGGGGGGTGCGACTTGGATGGCCTTGAGACCGGGCCTTGGACCCTTGGAT
GTGTGTGTGGCCTTGATGCCGGGCCCTTGATGACCCTATGTGGCCTAGAT
GCCGGGCCTTGGACCCTTTGGAAGATGGTGGTCTTGAGACCGTCTCTTGG
AGATATGAAAATATTGATCGATCACATGAAACACACGAACAAAGAGGGAT
AAAAGGAAAGTGGGCCCAGAGAGACACACGCCACTCTTTTCCACTCTCCT
GAACCCTGCCCTCATTGGCCAACAGAAGGGTCCAAGCCAGAGCCTCCATT
ATTGGTGGAGATAACCTCTGTACTTCAACTCGTCACTCCTGCTCTCATCA
TACGTCATCCATCCTATTCCGCCGCATATCTCATACATACGTACTCAACC
GTTACCTCAAAGATCCACTGCTACAAGTACCTCAAACATGAGTTTTTAGG
TGGGATTTCTTATATGGATTCACAGAATCGAAGAGAAACAGCCGTATTGC
GCAGAATCACCACCTTATGCATGCTCTGGCGCGGCTCTACAAACGAAGAT
TGAGCTTTTGGGATTGAGAAACGTCTACTGCAAGACCTTGCACAAGATTT
TGTTCCGAGCTGTCTGTTGACTACCCGTAGATATTCCGAAGGGGCATGTA
ACGACAAATTATTGCAGGACTGCACCACTTTTTACAGCCCCCGTCTTGAC
CGATTTCGGCTTTTTGGGCATCCGTCGTCATCATCCATCCCATCATATCC
AGGAACCTGCGGCGGAAGAATGCTGCGGTAACGGCTGCTCTACGTGCGTG
TGGATTGGGTACTG GTGAGACTGCCGCAGTTCCTTCAGATGTGTGCCATC
GTTGAAAGCAGGGCGATCAAACTCTACAGTTGCGGAACAACATCCTAGGA
TGTGCCGAGAAAATCACAATCTACCACGTTGACGTAGATAGGTTGTTTTT
TTATTGCGGCGTGGAGTGCTGGTTAGGTGTCTCCGCTACATCTCATGACG
ACCCGATATATTGGAACGACCCCATATTCTCCACGTCCGATCCTTCTCGA
TGTACTCCCGTCCTGGAACCTCCCGACAGGGAAGAGCTGCAGGCGTGGGA
AGAAGCAGGACGCGAGCGAGAGGAGGCGCCGCCGTGA AGTCGTGCGGAAA
TATTCCAATAGGTTCTGACTTCTGCTGGTGTGGCCACTCCGGACGTTCAA
TGTTTTTGCCTAGAAGCATCGCATGAGGTGTTGGCCGCAGCCCCAGGAGT
GTTATGTTAGAGCGTTTGATTGTCTCAGCGTTTGCATCTCTACTCGGACC
AAAACTCGGTCAGGGTTGTTAGTTCTTGACTCGACGTAGGTGTTGGGTGA
AAGCTTAGCTACAGTAGGCACCTTTATTATTTCTTGCACCCGCTTCGCGC
TGCGAACGTCAGGTCTTGAACAACTGCTGTTTCTGTGTAGCTCGTGTAGC
TGTACAATTAATGGCCCAACATGGCCCAAGCTGTATAATCCTGTACATGT
ACTAGCCCACAGCAGATTGTGCCGAGTCGGGGCTGCGTGCTTGTGTTGTT
TTATGGTTTTGTGTTTGTTTGCCGTCTTGGATGCCTCATGTCCATGGCTA
TGTCAGACCATGAATAGCAAGTTCAGCTGAGAAGAGGAGGACGTGCTACA
CACTGCCTCCCCTGCCTGTTGCGTGGCCTAAGGCACATGTGTGTATTTTA
TGCGGCCAGACGTTCGAAGTCGTCCTTTTTCGCTGTTCGTAGTTTTTGCG
ACGTGTGTTCGTCGAGGTCCGTCCGCATTCCACTCCACGGTTACATTGTA
CTGTACCGAAGACGGCTCTTGCACATACATGATCTATTGGGAATCTCTAC
GCACGTGAATTGAAAGCTAGGCTTCATCGTTACGTTTACATCTCACAATA
CTTTCTGTGGTGGCTCCTCAAAACCGGAAGGAGAGTCTCGACAAGAATGA
TCGAGGGTCAATAAACTTTTTTTCAAGTTGTAGGATAGCATCTCCGTGGT
TCTCTTCTGATGCGATGGTGAAGTACACTGCGCTCCGTACTCAACATGTT
CGTCCGCTATCCGGTGAGGAACCAAGCCACTGCTGAAGGGTGGGCAGTCG
GCGGCTTTGAAGGACCACACAGGTGAGACCCCAACAAAGTGCATGGGTCT
CCGCGGTGAAGGGTCAAGTTCTAAAAGATGCTTCTTGTAAAGCGCGATCA
CGCAAAATGACATGATTTTCAAGCCTTTTGGTTGTTGTGACATGATGATA
TGTCTTGTGGAGTGAAATGACAAGATCCGGCGACCATAGCCCTTTCTCTC
AAATGTCTCTTGGCACGCGCACAGAAGGGCTAAGTCGAGGACCCCGATAC
CAGCCGAGGCCAAGGAGTTGGCTGCACCACCAGCGGCTAGCGCAAGGCAA
GCTTCATCGGAGAG GTGGGCTGCACTGGATCATTGTCTCCCAATCGCAAC
GAGATGCGTGCTGTGTTATGCCTAATTCGACTCGGCAGTCGTTGCTTCAA
CGCACGTTCAACGCAACGAAGGTTGCTCAGCTGTTTTCACCTTGCGTTCG
AGATGCCGAGAGCCATTGTTGCAGAGGCCATGCTTCTATCAGTCGTCGGG
AAATTGTGTACGGCACGGACCATGTCTACTTTCTAGGCGGTTGTTCCAGG
CTTTGTTTACCCAAGGATGACTTGCGAAGATGTTTTCTTTTAATACATGA
ACTAGAAGTACGAATTTTGCACCAGGTGACAGTACACGCCCCCAAAACTG
ACGGTGTTGTACGGCATCGCGAGGCAGCTTTCCATGTGCATCGATAAAGC
TTTAGCCTGCTCTCATGACAACTCTCAAGACCTCTTGCCTACCTAGATTG
CCTCCTTCTCGCCGACTTCGCTTGTTTCTGACAGATGGACCCGTCCGCGT
AAAGTCTATATGGTGAAGGTTAGTAAACCTGTATCCATTAAAGGTACTCA
CCGTCTTATCACGGGCGACCGTGGCGCGTCTGGGGAGACACGTCGGTGGT
CGAGGTTAAAGAATGGTGGTTTGAATTTCAGAACTGCTTGATGAGATAGT
GCTACGCTGGTGATAGGGCGGGGCCGAGGTTTTGAGTTCCATCCGCCGAC
CGTGAAAGGGCAAGGTTGATGTTTGGTGCAGTGCAGATAGGTAAGCAGGT
TTGTTGATCGCTGCAGGCGTGATTCTTAGGTAGCATCGACCGCACTTCGG
CTGACCAACGCATTCCTGTGTGTGCGTGCGGTTTGCTCTTCTATGGTGAG
GCGGCCGAAGGAACTAGAGGGACGTGGAAAGGCGATTGGGACAAGAAGTA
GATGCTTGTGAGGTTCAGTGTTAAGTATTCAAGGCCAAGGTAGCACTTCT
GCGCGCTTTTCTGTCGTGCTGTATGCACGATGTACCTGTGCTGTTGATCG
GTCTACAGCAATTAAATCCGGGCGTGAAACATGGCGTCATCGTCGAGTGC
TAAATTGGTCGTTCGAAAGTTCTTGTGAGAATTTGGTGGTGCGTTCGATC
CTGTTCACACTTTGCGTTGGGGCGGGTATAGTACACGGACGACCAACAAA
CGTGACGTTTTGGATTGGATGAGAGATTCGGGTGTCAAATGGAGCCACAT
TGCACCCTTATCCTTGCGTATCGATGTTCAATCAGCGGTAAGTGTGGCAG
AGAAGCGGGTGAACGGAACTTGAAGATTAGTTTTCGTCCAAAATGCCTAG
TCTTATCCCTGGTTTGATATCGTGCGCTGTTCCCTCTCCTCGATAAGTAC
AGCAGCCACAAGTACGCAGTATCGGATTGTAGAAGAAGTAAAACACCACT
TCGACAAGCGCACCCTCACATACCAACAATGTAGGCAGGACCCAGTGGTA
TCAAAGTGCGAAGCAGAAGTTCTACGCACGCACATGCGTAGTTTGCATGA
ATAAACAGCGCGC back to top Coding sequence (CDS) from alignment at P-lacustris_contig1009:61684..66346+
>mRNA_P-lacustris_contig1009.177.1 ID=mRNA_P-lacustris_contig1009.177.1|Name=mRNA_P-lacustris_contig1009.177.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=1284bp|location=Sequence derived from alignment at P-lacustris_contig1009:61684..66346+ (Pleurocladia lacustris SAG_25_93) back to top