mRNA_P-lacustris_contig1003.143.1 (mRNA) Pleurocladia lacustris SAG_25_93
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_P-lacustris_contig1003.143.1 vs. uniprot
Match: A0A6H5L6C6_9PHAE (IPPc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6C6_9PHAE) HSP 1 Score: 311 bits (797), Expect = 9.790e-92 Identity = 189/358 (52.79%), Postives = 227/358 (63.41%), Query Frame = 1 Query: 22 PAGGAASGKGQXXXXXXXXXXXXKGTSVAKEDDMDDFAWMPSDERMCVGDGLPKTRTVLQADIVFWLGDLNYRIAEEIPDEDVFEMLKKDDLETLRRLDQLTIARNS--GTAFEEFQEGPLCFPPSYKYIPGTK----EFDNRRVLPLMPEKKVRCPSWCDRVLYSVGMQSGSSVRRLGLDKYWSSGPLLSDHMPVSALFRTSLACAPQITLIETDIEVEPISPRRAAAEAAFDSSPFARVVLEPPALMLVLDQTPLLSAVVEITNTGGMQGNYHVCEDSVPSWMSLDGNERGELDPGEKVKIGIVIDVAEAEAAAEKDSKGGPRQPYDRPAACAVLRVEVDGGGSGTMLPVVCNLDD 1077
PAGG +SGKG+ KGT A+E ++DDFAWMPSDE M G LPKT+TVLQADIVFW+GDLNYRI EE PD++VFEML+ DDLETLRR+ + + G GP P + P + E R+ V W R + + S+ R +G S P H VSALFRTSLACAPQ T+ E D++VEP+SPRR A+ AA SPFARVVLEPP L+L+LDQTP LSAV EI+NTGG++G +HVC+DS+P W+SLDG+E GEL+PGEKV+I IVID AE RPAACAVLR+EVDGGGSGTMLPVVCNL D
Sbjct: 463 PAGGVSSGKGEIDGSGSEAE---KGTRPAEEVEVDDFAWMPSDEGMSAG--LPKTKTVLQADIVFWIGDLNYRITEETPDQEVFEMLQNDDLETLRRVWFGSADHRACVGDGVPRVPGGPSLLPAILQVHPRHQGIRSEASRRKRSDARRGATVFSTRWGCR---AATLFDDSASRGIGAPAL--SCPTTCLH--VSALFRTSLACAPQKTVAEPDVDVEPLSPRRTASIAASKLSPFARVVLEPPTLVLILDQTPSLSAVTEISNTGGIKGAFHVCKDSLPGWISLDGSELGELEPGEKVEITIVIDAAEXXXXXXXXXXXXXXXXXHRPAACAVLRIEVDGGGSGTMLPVVCNLGD 808
BLAST of mRNA_P-lacustris_contig1003.143.1 vs. uniprot
Match: D8LL08_ECTSI (IPPc domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL08_ECTSI) HSP 1 Score: 263 bits (671), Expect = 2.840e-74 Identity = 127/179 (70.95%), Postives = 147/179 (82.12%), Query Frame = 1 Query: 91 KGTSVAKEDDMDDFAWMPSDERMCVGDGLPKTRTVLQADIVFWLGDLNYRIAEEIPDEDVFEMLKKDDLETLRRLDQLTIARNSGTAFEEFQEGPLCFPPSYKYIPGTKEFDNRRVLPLMPEKKVRCPSWCDRVLYSVGMQSGSSVRRLGLDKYWSSGPLLSDHMPVSALFRTSLACAP 627
KG A++ ++DDFAWMPSDE M G LPKT+TVLQAD+VFW+GDLNYRI EE PD++VFEML+ DDLETL LDQLTIAR SGTAF+EFQEGPLCFPPSYKYIPGTKE+D R PEKKVRCPSWCDRVLY++GMQ G SVRRLGL++YWSSGPL+SDHMP + ++S P
Sbjct: 532 KGARPAEDVEVDDFAWMPSDEGMSAG--LPKTKTVLQADVVFWIGDLNYRITEETPDQEVFEMLQNDDLETLSGLDQLTIARASGTAFQEFQEGPLCFPPSYKYIPGTKEYDQR------PEKKVRCPSWCDRVLYAMGMQGGDSVRRLGLERYWSSGPLVSDHMPGEEVAQSSFHGVP 702
BLAST of mRNA_P-lacustris_contig1003.143.1 vs. uniprot
Match: A0A835Z928_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z928_9STRA) HSP 1 Score: 157 bits (396), Expect = 4.110e-36 Identity = 114/353 (32.29%), Postives = 167/353 (47.31%), Query Frame = 1 Query: 166 GDGLPKTRTVLQADIVFWLGDLNYRIAEEIPDEDVFEMLKKDDLETLRRLDQLTIARNSGTAFEEFQEGPLCFPPSYKYIPGTKEFDNRRVLPLMPEKKVRCPSWCDRVLYSVG-MQSGSSVRRLGLDKYWSSGPLLSDHMPVSALFRT---------------------------------------SLACAPQITLIETDIEVEPISPRRAAAEAAFDSSPFARV----VLEPPALMLVLD-----QTPLLSAVVEITNTGGMQGN------YHVCEDSVPSWMSLDGNERGELDPGEKVKIGIV-IDVAEAEAAAEKDSKGGPRQPYDRPAACAVLRVEVDG----GGSG 1044
GD T +L D+V WLGD+NYRI + E+V M+ + E LR LDQL+ +G AF +F EG L F P+YK I GT++FD L PEKK+RCPSWCDR+L+S + + V+R+ L+ YWSSGP +SDH PVSALF SLA +++L + +SP + AA ++ A + ++ P ++ V D T L ++++ G + G YHVCE S P W+ L G G L+ + G++ +D+ ++ + GG P ACA+L + + GGSG
Sbjct: 364 GDSGGGTIGILDHDVVVWLGDMNYRIGGTVTSEEVGRMVAAGETEALRELDQLSTEMAAGRAFPQFFEGRLSFDPTYKLIRGTRDFD------LRPEKKMRCPSWCDRILWSAPHVCNAGPVQRMSLENYWSSGPYVSDHAPVSALFALTLAYMDNPQQQDRLLXXXXXXXXXXXXXADKLKREWQEWSLAQVEELSLAHSTQSTLCLSPPLTSGYAAVMATATAALASLRIVAAPGVLTVQDIERTAVTSLFVQLIDVPPAGAVAGGGDVPLAYHVCESSRPPWIQLFGAS-GTLNAPDTASDGLIEVDIDPSKIEFRPRANGGGYLP-----ACAMLVITISDVRTDGGSG 704
BLAST of mRNA_P-lacustris_contig1003.143.1 vs. uniprot
Match: A0A7I6N0L2_9STRA (Putative inositol polyphosphate 5-phosphatase (Fragment) n=1 Tax=Lagenidium giganteum TaxID=4803 RepID=A0A7I6N0L2_9STRA) HSP 1 Score: 117 bits (292), Expect = 4.650e-25 Identity = 62/143 (43.36%), Postives = 83/143 (58.04%), Query Frame = 1 Query: 193 VLQADIVFWLGDLNYRIAEEIPDEDVFEMLKKDDLETLRRLDQLTIARNSGTAFEEFQEGPLCFPPSYKYIPGTKEFDNRRVLPLMPEKKVRCPSWCDRVLYS------VGMQSGSSVRRLGLDKYWSSGPLLSDHMPVSALF 603
+L D VFWLGDLNYRI +++ E+ F+M + DL L + DQL I R G F F+EGPL FPP+YK+ GT +++ R PEKK+R P+WCDR+L+ V +Q ++V L L SDH PV A F
Sbjct: 184 ILNHDFVFWLGDLNYRILDDVSTEECFQMAESGDLHELVQRDQLLIERKRGNVFHGFEEGPLSFPPTYKFQAGTSQYEKR------PEKKLRAPAWCDRILWKAKTPAHVTLQHYNAVMALDL----------SDHKPVHAFF 310
BLAST of mRNA_P-lacustris_contig1003.143.1 vs. uniprot
Match: A0A7M3S7J5_9STRA (Putative inositol polyphosphate 5-phosphatase (Fragment) n=1 Tax=Globisporangium nunn TaxID=82942 RepID=A0A7M3S7J5_9STRA) HSP 1 Score: 115 bits (288), Expect = 4.890e-25 Identity = 65/143 (45.45%), Postives = 82/143 (57.34%), Query Frame = 1 Query: 193 VLQADIVFWLGDLNYRIAEEIPDEDVFEMLKKDDLETLRRLDQLTIARNSGTAFEEFQEGPLCFPPSYKYIPGTKEFDNRRVLPLMPEKKVRCPSWCDRVLYS------VGMQSGSSVRRLGLDKYWSSGPLLSDHMPVSALF 603
+L D VFWLGDLNYRI EE+P E VF+ + + L RLDQL I R G F F+EG + FPP+YKY GT ++ R PEKK+R P+WCDR+L+ V Q+ ++VR L L SDH PV A F
Sbjct: 145 ILNHDFVFWLGDLNYRINEEVPVEVVFQHAESGMFKELLRLDQLNIERKRGAVFRGFEEGAITFPPTYKYQAGTTVYEKR------PEKKLRAPAWCDRILWRAKNPDHVVQQNYTAVRTLDL----------SDHKPVQASF 271
BLAST of mRNA_P-lacustris_contig1003.143.1 vs. uniprot
Match: A0A7S4D643_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D643_HETAK) HSP 1 Score: 114 bits (284), Expect = 3.540e-24 Identity = 66/142 (46.48%), Postives = 83/142 (58.45%), Query Frame = 1 Query: 193 VLQADIVFWLGDLNYRIAEEIPDEDVFEMLKKDDLETLRRLDQLTIARNSGTAFEEFQEGPLCFPPSYKYIPGTKEFDNRRVLPLMPEKKVRCPSWCDRVLYSVGMQSGSSVRRLGLDKYWSSGPL-LSDHMPVSALFRTSL 615
++ D+VFW+GDLNYRI +P E V E + DL LR LDQL R +G AF F+E PL F P+YKY PGT +D R PEKK R P+WCDRVL+ + SS+ +L Y L +SDH PV A F +L
Sbjct: 10 IMDHDVVFWMGDLNYRIDMALPKEAVDEKVDAGDLAYLRDLDQLNQGRAAGRAFAGFEEAPLTFAPTYKYQPGTDAYDRR------PEKKQRAPAWCDRVLWWA--KDKSSITQLS---YGRCAQLKMSDHKPVGAEFAAAL 140
BLAST of mRNA_P-lacustris_contig1003.143.1 vs. uniprot
Match: A0A1E7EW08_9STRA (DNase I-like protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EW08_9STRA) HSP 1 Score: 117 bits (294), Expect = 8.510e-24 Identity = 86/254 (33.86%), Postives = 130/254 (51.18%), Query Frame = 1 Query: 190 TVLQADIVFWLGDLNYRIAEEIPDEDVFEMLKKDDLETLRRLDQLTIARNSGTAFEEFQEGPLCFPPSYKYIPGTKEFDNRRVLPLMPEKKVRCPSWCDRVLYSVGMQSGSSVRRLGLDKYWSSGPLLSDHMPVSALFRTSLACAPQITLIETDIEV-EPISPRRAAAEAAFDSSPFARVVLEPPAL---MLVLDQTPLLSAVVEITNTGGMQGNY---------HVCEDSVPSWMSLDGNERGELDPGEKVKI 912
++ D++FWLGDLNYRI E +P E V E+ + L+ LR LDQL I R G +F+ F+EG L F P+YKY PGT ++ R PEKK+R P+WCDR+L+ + V++L ++ S P SDH PV + R +T+ + +E E I + F++ V L+ L + DQ+ L +++TNTG + + ++C+ SWM++ G L PGE I
Sbjct: 228 SIADHDVIFWLGDLNYRIDESMPTEKVLELAVSNRLDPLRPLDQLNIERREGRSFQGFEEGALNFVPTYKYQPGTDIYEQR------PEKKLRAPAWCDRILW-MAQSDPQHVQQLTYNR--SETPNCSDHKPVYSTMR--------VTVKDVILERREAIYKELLSLLDRFENQSLPMVGLDTVELDFGPVRYDQSVTLP--IQVTNTGNVCAQFRFVPKLDENYLCK----SWMTVTPTY-GMLIPGEAAAI 457
BLAST of mRNA_P-lacustris_contig1003.143.1 vs. uniprot
Match: A0A7M3S7J9_9STRA (Putative inositol polyphosphate 5-phosphatase (Fragment) n=1 Tax=Pythiogeton ramosum TaxID=1217586 RepID=A0A7M3S7J9_9STRA) HSP 1 Score: 109 bits (273), Expect = 9.760e-24 Identity = 59/139 (42.45%), Postives = 81/139 (58.27%), Query Frame = 1 Query: 193 VLQADIVFWLGDLNYRIAEEIPDEDVFEMLKKDDLETLRRLDQLTIARNSGTAFEEFQEGPLCFPPSYKYIPGTKEFDNRRVLPLMPEKKVRCPSWCDRVLYSVGMQSGSSVRRLGLDKYWSSGPLL--SDHMPVSALF 603
+L D+VFW GDLNYRIA+ + E+ F++ E L +QL R SG AF+ F+EG + FPP+YKY GT ++ R PEKK+R P+WCDRVL+ S + + ++ P+L SDH PV ALF
Sbjct: 61 ILNHDVVFWFGDLNYRIADGLTTEECFQLADARQFEKLLACEQLVRERRSGHAFQPFEEGVITFPPTYKYQQGTNIYERR------PEKKLRAPAWCDRVLWR------SKTPKQVTQRVYNHVPMLDISDHKPVHALF 187
BLAST of mRNA_P-lacustris_contig1003.143.1 vs. uniprot
Match: A0A7R9U264_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U264_9STRA) HSP 1 Score: 114 bits (285), Expect = 1.140e-23 Identity = 89/262 (33.97%), Postives = 131/262 (50.00%), Query Frame = 1 Query: 193 VLQADIVFWLGDLNYRIAEEIPDEDVFEMLKKDD--LETLRRLDQLTIARNSGTAFEEFQEGPLCFPPSYKYIPGTK--EFDNRRVLPLMPEKKVRCPSWCDRVLYS------VGMQSGSSV-------------RRLGLDKYWS-SGPLLSDHMPVSALFRTSLACAPQITLIETDIEVEPISPR-----------RAAAEAAFDSSPFARVVLEPPALMLVLDQTPLLSAVV---EITNTGGMQGNYHVCEDSVPSWMSL 864
VL D+VFW+GDLNYRI E + ++V++++ D LE L LDQL R++G +F F EG L F P+YKYIPG K +DNR PEKK+RCPSWCDRVL+ V +SV + L +Y + G +SDH+PV+A+F + Q +E E+ IS R R + A + S R + +++ + P L+A+V + G + + +SVP+W+ L
Sbjct: 76 VLDHDLVFWMGDLNYRIVEGVELDEVYQLINSGDDGLEKLIELDQLNQERSAGRSFRGFHEGRLRFGPTYKYIPGEKPQRYDNR------PEKKMRCPSWCDRVLWRQPPGTMVSYDQFASVDPRPVRETNEAFRESVQLLQYRAVMGLAISDHVPVNAVFDAKVRKIDQQRRLEVCREI--ISERARSECRTIPLLRPSERAMWFSD--VRYEQDQQRSLMLHAEIPSLAAIVGGRDQAADGAPDVPFRISSNSVPAWLRL 327
BLAST of mRNA_P-lacustris_contig1003.143.1 vs. uniprot
Match: A0A7R9VEQ0_9STRA (Hypothetical protein n=2 Tax=Eupodiscales TaxID=33838 RepID=A0A7R9VEQ0_9STRA) HSP 1 Score: 117 bits (293), Expect = 1.420e-23 Identity = 91/258 (35.27%), Postives = 130/258 (50.39%), Query Frame = 1 Query: 205 DIVFWLGDLNYRIAEEIPDEDVFEMLKKDDLETLRRLDQLTIARNSGTAFEEFQEGPLCFPPSYKYIPGTKEFDNRRVLPLMPEKKVRCPSWCDRVLYSVGMQSGSSVRRLGLDKYWSSGPLLSDHMPVSALFRTSLACAPQITLIETDIEVEPISPRRAAAEAAFDSSPFARVVLEPPAL---MLVLDQTPLLSAVVEITNTGGMQGNYHVCE--DSVP---SWMSLDGNERGELDPGEK---VKIGIVIDVAEAEA 945
D+ FW+GDLNYR+ E+IP E V E+ +K +LE L DQL I R+ G F+ F+EG L F P+YKY PGT ++ R P+KK+R P+WCDR+L+ Q S V +L Y S +SDH PV F ++ Q E EV + + F++ V L+ +L + DQ L +++TNTG + + + D V WM++ G L PGE+ + I ID A A A
Sbjct: 359 DLAFWMGDLNYRVDEQIPTEKVIELSQKSELEELIANDQLNIERSQGRVFQGFEEGVLTFQPTYKYQPGTDLYEQR------PDKKLRAPAWCDRILWLA--QEPSHVTQLS---YKRSELNISDHKPVMGTFAITIKDVVQSKREEVYEEVMKLLDK-------FENQTLPMVGLDRISLDFGEVRYDQKVTLP--IKVTNTGKVVAQFRLVPKLDEVTLCKPWMTVSPTY-GMLIPGEQPATLNFTITIDNATAHA 595 The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig1003.143.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-lacustris_contig1003.143.1 >prot_P-lacustris_contig1003.143.1 ID=prot_P-lacustris_contig1003.143.1|Name=mRNA_P-lacustris_contig1003.143.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=322bp MDDFAWMPSDERMCVGDGLPKTRTVLQADIVFWLGDLNYRIAEEIPDEDVback to top mRNA from alignment at P-lacustris_contig1003:56537..63207+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-lacustris_contig1003.143.1 ID=mRNA_P-lacustris_contig1003.143.1|Name=mRNA_P-lacustris_contig1003.143.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=6671bp|location=Sequence derived from alignment at P-lacustris_contig1003:56537..63207+ (Pleurocladia lacustris SAG_25_93)back to top Coding sequence (CDS) from alignment at P-lacustris_contig1003:56537..63207+ >mRNA_P-lacustris_contig1003.143.1 ID=mRNA_P-lacustris_contig1003.143.1|Name=mRNA_P-lacustris_contig1003.143.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=1932bp|location=Sequence derived from alignment at P-lacustris_contig1003:56537..63207+ (Pleurocladia lacustris SAG_25_93)back to top |