Homology
BLAST of mRNA_P-lacustris_contig1003.139.1 vs. uniprot
Match:
D8LL05_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL05_ECTSI)
HSP 1 Score: 277 bits (709), Expect = 7.970e-89
Identity = 148/162 (91.36%), Postives = 158/162 (97.53%), Query Frame = 2
Query: 35 MAGGQQQQSIDLSVLSLEQLNQMKTQHEEDVQALSGNFVKLRDAQARFSESISAVEALGSKVEGKEILVPLTQSLYVPGRIIDADKMMVDVGTGYYVQKDQQKTAEFLGRKKEIVTTNLESLRNAIDVKRKNLEAIVVVMKRKIGEIENKRAEFKSSQEAKA 520
MAGGQQQQSIDLSVLSLEQLNQMKTQHEE+VQ LSGNF+KLRDAQARFSESISAVEALGSK E KEILVPLTQSLYVPGRI++ADKMMVDVGTGYYVQKDQQKTAEFLGRKK++VTTNLESLRNAIDVKRKNLEAIV+VM+RKIG+IE KRAEFKSS+EAKA
Sbjct: 1 MAGGQQQQSIDLSVLSLEQLNQMKTQHEEEVQTLSGNFMKLRDAQARFSESISAVEALGSKTEDKEILVPLTQSLYVPGRIVEADKMMVDVGTGYYVQKDQQKTAEFLGRKKDMVTTNLESLRNAIDVKRKNLEAIVMVMRRKIGDIETKRAEFKSSEEAKA 162
BLAST of mRNA_P-lacustris_contig1003.139.1 vs. uniprot
Match:
A0A835ZFR4_9STRA (Prefoldin subunit-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFR4_9STRA)
HSP 1 Score: 172 bits (437), Expect = 3.120e-48
Identity = 85/152 (55.92%), Postives = 118/152 (77.63%), Query Frame = 2
Query: 53 QQSIDLSVLSLEQLNQMKTQHEEDVQALSGNFVKLRDAQARFSESISAVEALGSKVEGKEILVPLTQSLYVPGRIIDADKMMVDVGTGYYVQKDQQKTAEFLGRKKEIVTTNLESLRNAIDVKRKNLEAIVVVMKRKIGEIENKRAEFKSSQ 508
Q+ +DLS LSLEQLNQ+KTQH+E+VQ L+ N+ LRD AR+ E+ SAVEA+G K EG+EILVPLTQSLYVPG++I+ DK +VD+GTGYY +K Q++T EFL RK +V NL SLR I++KRK E + +VM++++ +IE R+++ + Q
Sbjct: 7 QREVDLSSLSLEQLNQLKTQHQEEVQTLTANYAALRDGLARYQEAKSAVEAMGRKAEGREILVPLTQSLYVPGKVIEGDKFLVDIGTGYYAEKSQRETEEFLTRKAGMVEANLASLREVIEMKRKAFETLTMVMRQRLSQIEENRSKYMAQQ 158
BLAST of mRNA_P-lacustris_contig1003.139.1 vs. uniprot
Match:
A0A7S3NIR8_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NIR8_9STRA)
HSP 1 Score: 138 bits (348), Expect = 2.480e-35
Identity = 73/149 (48.99%), Postives = 107/149 (71.81%), Query Frame = 2
Query: 53 QQSIDLSVLSLEQLNQMKTQHEEDVQALSGNFVKLRDAQARFSESISAVEA--LGSKVEGKEILVPLTQSLYVPGRIIDADKMMVDVGTGYYVQKDQQKTAEFLGRKKEIVTTNLESLRNAIDVKRKNLEAIVVVMKRKIGEIENKRAE 493
QQ ID+S LSLEQLN MK +HEE VQ LS ++ A+ RF ES + ++ L + EGKE+LVPLTQSLYV G ++DAD+++VD+GTGY++QK Q E + RK ++VT N++S+ ++ K++NL AIV VM+ K+ +I+ ++AE
Sbjct: 5 QQQIDISKLSLEQLNSMKQEHEESVQELSSQLETMKLAEGRFRESRNTLDIIKLDDQAEGKEMLVPLTQSLYVSGNVLDADQVLVDIGTGYFLQKSVQGAQEMIDRKLKVVTQNMDSIHTVVNQKQENLNAIVTVMQYKMQQIQKQKAE 153
BLAST of mRNA_P-lacustris_contig1003.139.1 vs. uniprot
Match:
A0A2P6NP58_9EUKA (Prefoldin subunit 5 n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NP58_9EUKA)
HSP 1 Score: 134 bits (337), Expect = 8.160e-34
Identity = 66/142 (46.48%), Postives = 108/142 (76.06%), Query Frame = 2
Query: 53 QQSIDLSVLSLEQLNQMKTQHEEDVQALSGNFVKLRDAQARFSESISAVEALGSKVEGKEILVPLTQSLYVPGRIIDADKMMVDVGTGYYVQKDQQKTAEFLGRKKEIVTTNLESLRNAIDVKRKNLEAIVVVMKRKIGEIE 478
QQ ID+S LSLEQLN K Q EE+VQ LS ++ +L+ A ARF++S A+ A+ ++ EGK +LVPLT SL+VPG++ + +++++D+GTGYYV K ++ ++F RK +++ N + + A+ VKRKNLE++++VM++KIG+++
Sbjct: 6 QQGIDISQLSLEQLNTFKQQFEEEVQVLSNSWQQLKLASARFTDSKDALSAIKTENEGKAMLVPLTTSLFVPGQLTNTEQVLIDIGTGYYVTKPVKQASDFFDRKIKMINDNADQVAQAVSVKRKNLESVLLVMQQKIGQMQ 147
BLAST of mRNA_P-lacustris_contig1003.139.1 vs. uniprot
Match:
F0YDJ5_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YDJ5_AURAN)
HSP 1 Score: 129 bits (323), Expect = 8.270e-32
Identity = 64/150 (42.67%), Postives = 102/150 (68.00%), Query Frame = 2
Query: 62 IDLSVLSLEQLNQMKTQHEEDVQALSGNFVKLRDAQARFSESISAVEALGSKVEGKEILVPLTQSLYVPGRIIDADKMMVDVGTGYYVQKDQQKTAEFLGRKKEIVTTNLESLRNAIDVKRKNLEAIVVVMKRKIGEIENKRAEFKSSQE 511
+D+S LSL+QLNQ+K+QHE+++ L L+ A+ RF +S A+ A+ EGK +LVPLTQSLYVPG++ D D ++V++GTGYY++K + + RK ++V N E++ + K +N EAIV++M+ K+ +I+ K+AEF Q+
Sbjct: 1 MDISTLSLDQLNQLKSQHEQELNQLRERHSSLKQAEGRFRQSKDALAAISKDDEGKSMLVPLTQSLYVPGKLCDVDSLLVELGTGYYLEKKKDDADAMIDRKIKLVADNAENITTVVAQKTRNHEAIVMMMQHKMAQIQEKKAEFDRQQD 150
BLAST of mRNA_P-lacustris_contig1003.139.1 vs. uniprot
Match:
A0A7S2C3Z7_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C3Z7_9STRA)
HSP 1 Score: 129 bits (323), Expect = 9.870e-32
Identity = 64/154 (41.56%), Postives = 108/154 (70.13%), Query Frame = 2
Query: 41 GGQQQQSIDLSVLSLEQLNQMKTQHEEDVQALSGNFVKLRDAQARFSESISAVEALGSKVEGKEILVPLTQSLYVPGRIIDADKMMVDVGTGYYVQKDQQKTAEFLGRKKEIVTTNLESLRNAIDVKRKNLEAIVVVMKRKIGEIENKRAEFKS 502
GG + IDLS + + QLN +KT HE+++ L+GN+ L+ AQ++ + ++ + +GS+ EG+EILVPLT SLYVPG I D +K+++DVGTGY+V+K K +F+ RK ++VT N + ++N K+KNLE IV++M++++ ++ + + K+
Sbjct: 5 GGGGGREIDLSQMDINQLNDLKTSHEQEIDQLTGNWRTLKHAQSKLNTAVVCLNEVGSQ-EGREILVPLTPSLYVPGTICDTNKVLLDVGTGYFVEKSLAKAKDFVDRKNKMVTVNADQIQNVTQQKQKNLETIVMIMRQRMAMMQQAQEDAKA 157
BLAST of mRNA_P-lacustris_contig1003.139.1 vs. uniprot
Match:
A0A068S4K0_9FUNG (Prefoldin-domain-containing protein n=2 Tax=Lichtheimia TaxID=688353 RepID=A0A068S4K0_9FUNG)
HSP 1 Score: 124 bits (312), Expect = 3.160e-30
Identity = 71/143 (49.65%), Postives = 99/143 (69.23%), Query Frame = 2
Query: 41 GGQQQQSIDLSVLSLEQLNQMKTQHEEDVQALSGNFVKLRDAQARFSESISAVEALGS-KVEGKEILVPLTQSLYVPGRIIDADKMMVDVGTGYYVQKDQQKTAEFLGRKKEIVTTNLESLRNAIDVKRKNLEAIVVVMKRKI 466
G QQQQ+++++ L L L Q+KTQ EE++ L+ ++ KLR AQARFS+ +VE+L S K + K ILVPLT SLYVPG++ D +K++VDVGTGYYV+K F K+E V NLE L+ I+ K+ +L AIV VM+ K+
Sbjct: 2 GSQQQQTVNITDLDLPSLQQVKTQLEEELSHLTQSYGKLRGAQARFSDCADSVESLKSEKADDKTILVPLTSSLYVPGKLSDVEKVIVDVGTGYYVEKSLDGATSFYKTKEEYVKQNLEKLQETINGKQSSLRAIVNVMQDKV 144
BLAST of mRNA_P-lacustris_contig1003.139.1 vs. uniprot
Match:
L8HDI9_ACACA (Prefoldin, alpha subunit n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HDI9_ACACA)
HSP 1 Score: 124 bits (310), Expect = 5.570e-30
Identity = 64/144 (44.44%), Postives = 98/144 (68.06%), Query Frame = 2
Query: 41 GGQQQQSIDLSVLSLEQLNQMKTQHEEDVQALSGNFVKLRDAQARFSESISAVEALGSKVEGKEILVPLTQSLYVPGRIIDADKMMVDVGTGYYVQKDQQKTAEFLGRKKEIVTTNLESLRNAIDVKRKNLEAIVVVMKRKIGE 472
GGQQ Q I ++ LSLEQL+ +K Q EE+ Q L+ + KL+ A RF +S ++ AL + G+E+L PLT SLYV G++ + + +M+D+GTGYY+++ Q+ E++ RK +V N E L+ A+ KRKNLEAI+ VM+ K+ +
Sbjct: 5 GGQQGQPIPITSLSLEQLSNLKQQFEEEAQTLAASLQKLKTAGQRFLDSKDSLAALTPETNGREVLAPLTSSLYVKGKLTNVEAVMIDIGTGYYIERTPQQAQEYVDRKLGLVQENAEKLQQALLTKRKNLEAIIGVMQEKMAQ 148
BLAST of mRNA_P-lacustris_contig1003.139.1 vs. uniprot
Match:
A0A6U1PSU8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1PSU8_9STRA)
HSP 1 Score: 123 bits (309), Expect = 1.060e-29
Identity = 64/152 (42.11%), Postives = 105/152 (69.08%), Query Frame = 2
Query: 53 QQSIDLSVLSLEQLNQMKTQHEEDVQALSGNFVKLRDAQARFSESISAVEALGSKVEGKEILVPLTQSLYVPGRIIDADKMMVDVGTGYYVQKDQQKTAEFLGRKKEIVTTNLESLRNAIDVKRKNLEAIVVVMKRKIGEIENKRAEFKSSQ 508
++ IDLS LS+EQL+ +K Q++E++ L+ + L A+ +F E+ A+ + EG++I+VPLT SLYVPGR+ + +K+MVD+GTGYY +K+ + EF+ RK ++++ N++SL + I K KN + + VM++K+ +I R EFKSSQ
Sbjct: 7 EREIDLSGLSIEQLSNLKQQNDEEMTQLNESLGSLNAAKLKFLEAKHALTEIPPNGEGRQIMVPLTGSLYVPGRLHEPNKVMVDIGTGYYAEKNSTQAKEFIDRKVKMISDNIDSLSSLITTKHKNADVVAYVMQQKLEQINANRNEFKSSQ 158
BLAST of mRNA_P-lacustris_contig1003.139.1 vs. uniprot
Match:
A0A7S3ZUY5_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZUY5_9STRA)
HSP 1 Score: 123 bits (308), Expect = 1.310e-29
Identity = 64/153 (41.83%), Postives = 100/153 (65.36%), Query Frame = 2
Query: 53 QQSIDLSVLSLEQLNQMKTQHEEDVQALSGNFVKLRDAQARFSESISAVEALGSKVEGKEILVPLTQSLYVPGRIIDADKMMVDVGTGYYVQKDQQKTAEFLGRKKEIVTTNLESLRNAIDVKRKNLEAIVVVMKRKIGEIENKRAEFKSSQE 511
QQ +D+S +SLEQLN K Q E +++ L L+ A+ RF +S A+ A+ EG+ +LVPLTQSLYVPG + D D+++V++GTGYY++K QQ E L RK V+ N E + + K++N +AIV +M+ K+ +I+ +R+E + Q+
Sbjct: 3 QQQVDISAMSLEQLNTYKGQFENEIKQLHARHSGLKQAEGRFRQSKDALAAISKDDEGRRMLVPLTQSLYVPGELGDPDQLLVELGTGYYIEKTQQGATELLDRKIGTVSKNAEDINTVVASKQQNYDAIVQMMQVKMAQIQERRSELQRQQD 155
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig1003.139.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 7.97e-89 / Id = 91.36 Expect = 3.12e-48 / Id = 55.92 Expect = 2.48e-35 / Id = 48.99 Expect = 8.16e-34 / Id = 46.48 Expect = 8.27e-32 / Id = 42.67 Expect = 9.87e-32 / Id = 41.56 Expect = 3.16e-30 / Id = 49.65 Expect = 5.57e-30 / Id = 44.44 Expect = 1.06e-29 / Id = 42.11 Expect = 1.31e-29 / Id = 41.83 Sequence D8LL05_ECTSI A0A835ZFR4_9STRA A0A7S3NIR8_9STRA A0A2P6NP58_9EUKA F0YDJ5_AURAN A0A7S2C3Z7_9STRA A0A068S4K0_9FUNG L8HDI9_ACACA A0A6U1PSU8_9STRA A0A7S3ZUY5_9STRA Pages
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Taxonomic scope Eukaryota Seed ortholog score 279.6 Seed ortholog evalue 9.1e-73 Seed eggNOG ortholog 2880.D8LL05 Preferred name PFDN5 KEGG rclass RC00055,RC00523 KEGG ko ko:K01881,ko:K03678,ko:K04797,ko:K09504 KEGG Reaction R03661 KEGG Pathway ko00970,ko03018,ko05203,map00970,map03018,map05203 KEGG Module M00359,M00360,M00391 Hectar predicted targeting category other localisation GOs GO:0001654,GO:0003674,GO:0003712,GO:0003714,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0006355,GO:0006357,GO:0007021,GO:0007275,GO:0007423,GO:0008092,GO:0008150,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009966,GO:0009968,GO:0009987,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010646,GO:0010648,GO:0015631,GO:0016043,GO:0016272,GO:0019219,GO:0019222,GO:0022607,GO:0023051,GO:0023057,GO:0030111,GO:0030178,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0032153,GO:0032501,GO:0032502,GO:0032784,GO:0032786,GO:0032968,GO:0032991,GO:0034243,GO:0034622,GO:0043010,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043933,GO:0044085,GO:0044424,GO:0044444,GO:0044464,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0045944,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048585,GO:0048731,GO:0048856,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0051286,GO:0060041,GO:0060255,GO:0060828,GO:0065003,GO:0065007,GO:0071840,GO:0080090,GO:0090090,GO:0140110,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:2000112,GO:2000113,GO:2001141 EggNOG free text desc. sister chromatid segregation EggNOG OGs COG1730@1,KOG3048@2759 Ec32 ortholog description Prefoldin Ec32 ortholog Ec-11_006250.1 EC 6.1.1.15 COG Functional cat. O Best tax level Eukaryota Best eggNOG OG NA|NA|NA BRITE ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03019,ko03029,ko03110 Exons 5 Model size 1450 Cds size 489 Stop 1 Start 1
Relationships
The following UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622815270.5153325-UTR-P-lacustris_contig1003:22353..23280 1622815270.5153325-UTR-P-lacustris_contig1003:22353..23280 Pleurocladia lacustris SAG_25_93 UTR P-lacustris_contig1003 22354..23280 - 1693493441.3437378-UTR-P-lacustris_contig1003:22353..23280 1693493441.3437378-UTR-P-lacustris_contig1003:22353..23280 Pleurocladia lacustris SAG_25_93 UTR P-lacustris_contig1003 22354..23280 - 1622815270.5756397-UTR-P-lacustris_contig1003:25142..25147 1622815270.5756397-UTR-P-lacustris_contig1003:25142..25147 Pleurocladia lacustris SAG_25_93 UTR P-lacustris_contig1003 25143..25147 - 1693493441.3955953-UTR-P-lacustris_contig1003:25142..25147 1693493441.3955953-UTR-P-lacustris_contig1003:25142..25147 Pleurocladia lacustris SAG_25_93 UTR P-lacustris_contig1003 25143..25147 - 1622815270.5858126-UTR-P-lacustris_contig1003:27141..27170 1622815270.5858126-UTR-P-lacustris_contig1003:27141..27170 Pleurocladia lacustris SAG_25_93 UTR P-lacustris_contig1003 27142..27170 - 1693493441.4052558-UTR-P-lacustris_contig1003:27141..27170 1693493441.4052558-UTR-P-lacustris_contig1003:27141..27170 Pleurocladia lacustris SAG_25_93 UTR P-lacustris_contig1003 27142..27170 -
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622815270.5274773-CDS-P-lacustris_contig1003:23280..23436 1622815270.5274773-CDS-P-lacustris_contig1003:23280..23436 Pleurocladia lacustris SAG_25_93 CDS P-lacustris_contig1003 23281..23436 - 1693493441.354388-CDS-P-lacustris_contig1003:23280..23436 1693493441.354388-CDS-P-lacustris_contig1003:23280..23436 Pleurocladia lacustris SAG_25_93 CDS P-lacustris_contig1003 23281..23436 - 1622815270.5407057-CDS-P-lacustris_contig1003:23846..23975 1622815270.5407057-CDS-P-lacustris_contig1003:23846..23975 Pleurocladia lacustris SAG_25_93 CDS P-lacustris_contig1003 23847..23975 - 1693493441.3629103-CDS-P-lacustris_contig1003:23846..23975 1693493441.3629103-CDS-P-lacustris_contig1003:23846..23975 Pleurocladia lacustris SAG_25_93 CDS P-lacustris_contig1003 23847..23975 - 1622815270.550518-CDS-P-lacustris_contig1003:24309..24378 1622815270.550518-CDS-P-lacustris_contig1003:24309..24378 Pleurocladia lacustris SAG_25_93 CDS P-lacustris_contig1003 24310..24378 - 1693493441.3708243-CDS-P-lacustris_contig1003:24309..24378 1693493441.3708243-CDS-P-lacustris_contig1003:24309..24378 Pleurocladia lacustris SAG_25_93 CDS P-lacustris_contig1003 24310..24378 - 1622815270.5661533-CDS-P-lacustris_contig1003:25007..25142 1622815270.5661533-CDS-P-lacustris_contig1003:25007..25142 Pleurocladia lacustris SAG_25_93 CDS P-lacustris_contig1003 25008..25142 - 1693493441.3787212-CDS-P-lacustris_contig1003:25007..25142 1693493441.3787212-CDS-P-lacustris_contig1003:25007..25142 Pleurocladia lacustris SAG_25_93 CDS P-lacustris_contig1003 25008..25142 -
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-lacustris_contig1003.139.1
>prot_P-lacustris_contig1003.139.1 ID=prot_P-lacustris_contig1003.139.1|Name=mRNA_P-lacustris_contig1003.139.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=163bp
MAGGQQQQSIDLSVLSLEQLNQMKTQHEEDVQALSGNFVKLRDAQARFSE back to top mRNA from alignment at P-lacustris_contig1003:22354..27170-
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-lacustris_contig1003.139.1 ID=mRNA_P-lacustris_contig1003.139.1|Name=mRNA_P-lacustris_contig1003.139.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=4817bp|location=Sequence derived from alignment at P-lacustris_contig1003:22354..27170- (Pleurocladia lacustris SAG_25_93)CCGACCTGCGCGACCACGTCAGGAAGAAG GTGATATAATCTCAGCATCGT
CTATTGTTTGTAGGCTCGATGCCTGTGGCAACGCCATCCTTTTGCTAAGT
GGCGCTACCTACCTGTATTGCCCTAACCATCCACGAGACCTCAGTATGTC
GTATCTATCTCATCCAACGATCAATCGCCTTCGTCGTTCAACTTTGTTAT
TGATGGATTGGTATGGTACAAGTATGCTGGATCTCTCGTTCGTTGGTTCC
TCTGCAAGAAACGAGTAACTGCTGCTGTACATGATGATGACAGCCATCGA
GATCAGGCGGAAAAACACTTTTACACACAAGCAAGCCACCGCGTTACAGC
AGTAATACATTCGCAAATTCAGAGTCAGTCGCTCTGTCGATGTTCGAGTC
TTCGAGTGCATCTCACGACATGGATATCGACATTTTGGACATGCACATGG
CTACAGCAGTACAGCAGTTTAGCATCACGTTGCATTGACTACAATATCGT
ATACGACGCAAGAGCTACGTACCCCATTTGGCATTGGGCGGTTGCCTTGA
ACACTATCCACACAGAGCAGACTAGTACTGAGTGTGTGCGGAACTTACCT
TGGTGTGACTGAACGCCCACTTGGAACCTCGTGGCCAATTATAGTCCTTT
AAACTTTAACCTTCTGAGTCTTCAGGCAGAGAAAATGATCATTAAATTGA
TTATCTCCTTTTGTACATTTATGGAGGGGATGACGACAAAACAGCCCGAA
ACCAACACCCGTAGGAATTGTACAGCATATGAGAGAACGTCCACACGCGT
AGGTGACCACTCATACCAACCAAAGCTCGCACACAGAGTGACTCAGATGC
TACAGCGCTTCAGCGGTCAACTCGCTCGGCCGTTTGTACACAAAATCCAC
TTCGCAGCAGAATGAACTGATACACTTGCACACGCACCTAGTCAGCACAT
ACAGGGCACACCCCACACAAATCTGCTGCTGCTACTACTACTCTTGTGCT
ATACATCAATGTCGTGCACCACAGCAGCGGTAGCTTGCTTGCTGCTCAGG
TGCGGAAAATTCACGCTTGTGAAAGAGGAGCTGTAGTGAGCCCGAAGGCC
CATGCTTGGGGTTGAGAGCGGGGAGGCAGGGAAGTACAGAAGTGCTCTAT
GGGCCTGAGGGTCTTCAAACACGAAAATGATCATTTGAAGATAAAACAAC
TTTATAATTTGTTATTATACTGAATAAAGAGCAGTGACAGGCACCGGTAA
ATATGGGACAGAACGCCTAGCGCGCTCTTCCCTTGATTTTGTTCCCACTC
AACGTTGATTATATTACCCTTCGACACGCCACGAGTCTGCCGCGGATGCT
CGTTACGACCTCTGTGTAGCTTCTACCCTGCAGAAGTACACATTTGGCTC
GAAGCTGTACTTCTATCTACCTCTCCCGCATGTTTTTTTTTCTGGTTCAG
AAAAAAAGAGCCAAACCCAGAGGGGTTAATGTGGCATCGTGCGTCGAAGC
ATGTGGAGGCTCACGGCCATTATCTGCTAAGTAGACTTGTATGGAACAAG
AAGAAGGATTGACTTAGGTTGCTTGAGAGTAGTGCTGACGTCACCGAGAA
TAGTAACTTGTCGGAAAGCAAGTGACTAGAGATTCTAGAATGAGGTGTCT
CAGGATTGAGAGCGGTAGTATACGGGAGAGACAAAGTGCAAGATCTAAGG
TAGGCGGTCGTACGACATCGATACAAGCTTGTTACGTCGGCGTCTGTCAA
AAATTCTTCTATTGAAAAGTTGTCCGGTCACTGGATGTTTGTCGTAAATC
CGAGAAAGAACTTGTACGATGATGCACTGAATTGCACGACATACGAAAAT
CTAGTTCAGTACTTCGATGGTATGAAGGTATTGATCGATGTGTTCCAGCA
GTGCTACTGCACCATACATATTTCGGACGATAAATATCGCAACAAGCTCT
TCACATCCTGTTTACCGTGCGGTACAGCAAGCAACAAACAGACACATACA
TTCACGGGTGGACACAAAGACAGGCATC ATGGCGGGAGGGCAGCAGCAGC
AGAGTATCGACCTGTCGGTGTTGTCGCTGGAGCAGCTGAACCAGATGAAG
ACGCAGCACGAGGAGGACGTGCAGGCTCTCTCGGGGAATTTTGTGAAACT
CAGAGACGCTCAG GTAAATGCAGGTCTTCATGTGATTGAAGCGTCAATAA
TACTCCAGTTGTATTATGGACTACAGTATGGGCTTGCGATCTACCCACAC
GACTTAGACTAGGGACGGTCAGGGTGTGCTAATTGGAATCATCTACTGTG
CTGCCACGGACTCTCAGGTGTGTGAAACTTGTCACGCTCTTTTTTATTTT
TGCTTTGCACCCAGTTTTAGTTTCAGCGCGGCTTGTAACCCCGACGAGTG
TGCATCAACCAGTGCGGGTCGGTATTTCCAGCGCGCCTGAAATTTCTGTT
GGCCTGCGGGCTGCTGCTGCAAGTGCTGCCACACGCACTCACATCGCGTG
CGTTAGATTCTGCCTGATGCCAGTTGCGAACATCTTTCAGTGCTGAGTTC
AATTCAACGCTTCCCATTCGTCGAAAAATCTAAAATTCTGCGTCCTGCCT
TCCTTCTCAGGGTTGACCAGACCGACCGCTGTCGTACCTGCTACCTTTAC
CTGTTGTGTTTCGTTTGTCTTCATATCTCCCCCCTCCTTCCTGCATGATT
GCTGCACTACGCCAATGCATAATCACTATAACACACTCCCTATCCCGCTG
CTTCCACTTCCTCCTTGATCCGTGGTGACTTATTTTCGTCAGGCACGATT
TTCTGAATCGATATCCGCGGTGGAGGCGTTGGGAAGCAAAGTGGAAGGCA
AGGAGATTCTG GTGAGATGAGACGGGGTCCATTCTTGGACGCAGTTTCAT
ATTGGTGTGTGTAGTGGAATGGAGTTAAGATACACCAGCAGCCTAGCCTA
ACTAAGGGTGCTATTTCCGTTCTCAAGGCATGCTGTCCTTCGCTTCGTTG
GAATCACCATTCCTGCACGTCGGCGGCACTTAGCCCCGTTGAGTTTGGTC
GATATGATGGGTTGCTTTCGATGTTGGTTGATTGTGGTGCACCCTCTCCC
CCCCAACGTCTTGACTCTGACACTTCGGTTGCTGCTGTTGCTTATGCTGT
TGCTGCTTGCACTGCTGCTTCTTGTGCTCTTCCTTTGGAATGAAGGTGCC
GTTAACCCAGTCGCTGTACGTGCCGGGGCGTATTATTGATGCGGACAAGA
TGATGGTGGACGTGGGAACGGGCTACTACGTGCAGAAGGACCAGCAGAAA
ACGGCAGAGTTCCTGGGGAGGAAA GTGAGTGCGATGTAGTGCGATATGGT
TCGGTGTTGCGGAGTAGATGAGCTGCAGGTATTTGCATCTACAACAGCAC
AACTATGTAGTGCGCAGTGTTTTCCTTGTATAGTGTACATTGCAGCCCAA
CGGGGGCGAGGAGGTAGCACCGGCGCTTACATGACCTGACAGCCGCCATC
AAGCCGGAGGAGCACGGTATTAAAATAGAAGAGTGTGCACTCCGTGGCGG
CCCTCCTCCCTCCCTCTCTGCCCCTCGAGAGGCCGTCGTGGTTTCTCTTT
GCCTGCCTCACAAGCATGCCCTCTTGCCCCCTCCTGAGGTATCAATCTAC
CCCCCACCGACGAACATATTGTCTTTGCACCCTTTCTTTCGTGCTTGCCA
CGAAAACGAACGCCTCCGTTTGACAATGTCTCAGAAAGAGATAGTGACAA
CCAACTTGGAGTCTCTACGCAACGCGATCGATGTCAAGCGCAAGAACCTG
GAGGCCATTGTCGTGGTCATGAAAAGAAAGATTGGGGAAATCGAGAACAA
ACGAGCGGAATTCAAGAGTAGCCAAGAGGCCAAGGCATGA TGAGAACACG
AGGAGCGCCGCAGACTCCAAAATGTTGGGGTGGCGTCAGACATCGCAGGG
TTTAATTGAAATACTTAGGTTACGGGTGGCTGCCGGTGTACCTTACCTTA
CGAACTCTGGTGCCTGGTCGGTTTGGGTCACGAGAAGATGCCCCTTGACT
TCACCCGGATCGTTGTGACTAGCGAACGATCTTGCTCCCGCATGTGGAAT
ATATCTATATCGCAGCGAGTGGGAGCAGCAGTGCAGTGTAGCGTCGCCGT
ACCCTCCTAGGGCATGGTTTTGCGTGCTACAATAGCTCGCCCAAAGACCG
CCAGTTTCGGGTACAGATCATACTTGTAGCTTCGAGTGCTGGGAGGAGGG
ACGGAGAAAGCCACACAGAATGTGGAGGTGTGCGTCTCCATGTGTCGGAT
TCTTGTACAGTTTTTCAACGTGCTACTACATCAGCGATTCTAAACTAATG
TTAACCTGTATGCATGCGTTAGATGCGGCAGGCGTCGGTCATATTTCACG
ATGAAGGTTACGGTCAACTACTGTAGCCAGCTAGGCCAGCATCGTGATGG
CCGCTCATGATATACAGCAGATACCCGGATTCTCGTCGTGTTCGCGACAG
GCATCAAGTATGATCAAGAGGGTGACGTTTCGTGCGGGCCATCTCCCCGT
CGAAGTGTATGTTGTATGAGTGGAGAATATGTTAGGGTGGAGTTTTTCGT
TGTGTACACGCTGCCGATGCACCAAAGTACGTCGGTGTGGGATCTCAGGG
GGGTCGAGATGTAAAAATAGAAGCCTGCTAGCTCCTTATTTTACTCCAAT
TGCCCGGAACTCGTACGACGTTGTGATTCGCAGTAGGAGAAGAAAACCGA
TTCGACTAACGACACACATTCGATATGGGAAGAAAATGGTCCTCTGCCGA
GCAGCCGAGCCTGTCCT back to top Coding sequence (CDS) from alignment at P-lacustris_contig1003:22354..27170-
>mRNA_P-lacustris_contig1003.139.1 ID=mRNA_P-lacustris_contig1003.139.1|Name=mRNA_P-lacustris_contig1003.139.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=978bp|location=Sequence derived from alignment at P-lacustris_contig1003:22354..27170- (Pleurocladia lacustris SAG_25_93) back to top