mRNA_P-lacustris_contig1003.135.1 (mRNA) Pleurocladia lacustris SAG_25_93

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-lacustris_contig1003.135.1
Unique NamemRNA_P-lacustris_contig1003.135.1
TypemRNA
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Homology
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BLAST of mRNA_P-lacustris_contig1003.135.1 vs. uniprot
Match: D8LL03_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LL03_ECTSI)

HSP 1 Score: 358 bits (920), Expect = 1.950e-114
Identity = 183/200 (91.50%), Postives = 190/200 (95.00%), Query Frame = 1 
Query:  184 VSIIKVDGPAKFKRVSGSSIGGGTYWGLCRLLTGATTYDESLDMASRGDSDKVDMLVGDIYGRGYSKFQLSSHTVASSFGKVGGMEAPGKPGSGVGEKDLVRSLLVMITMNIGQVAYLNAKLHNTRRIYFVGNFLRHNRLSGQQLAFAIDYWSSGEMEALFLEHEGYCGALGSFLMSGTEEPIAGGGGPMGHAASESTED 783
            VSIIKVDGPAKFKRVSGSSIGGGTYWGLCRLLT AT+YDESLDMA +G+SDKVDMLVGDIYGRGYSKFQLSS+T+ASSFGKVGGMEAPGKPGSGV E+DLV+SLLVMITMNIGQVAYLNAKLHNTRRIYFVGNFLRHNRLSGQQLAFAIDYWSSGEMEALFLEHEGYCGALGSFLMSGTEEPI GG      AASESTED
Sbjct:  346 VSIIKVDGPAKFKRVSGSSIGGGTYWGLCRLLTEATSYDESLDMARQGNSDKVDMLVGDIYGRGYSKFQLSSNTLASSFGKVGGMEAPGKPGSGVSEEDLVQSLLVMITMNIGQVAYLNAKLHNTRRIYFVGNFLRHNRLSGQQLAFAIDYWSSGEMEALFLEHEGYCGALGSFLMSGTEEPIGGG------AASESTED 539
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BLAST of mRNA_P-lacustris_contig1003.135.1 vs. uniprot
Match: A0A835Z2M7_9STRA (Fumble-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2M7_9STRA)

HSP 1 Score: 273 bits (699), Expect = 5.510e-82
Identity = 135/182 (74.18%), Postives = 160/182 (87.91%), Query Frame = 1 
Query:  184 VSIIKVDGPAKFKRVSGSSIGGGTYWGLCRLLTGATTYDESLDMASRGDSDKVDMLVGDIYGRGYSKFQLSSHTVASSFGKVGGMEAPGKPGSGVGEKDLVRSLLVMITMNIGQVAYLNAKLHNTRRIYFVGNFLRHNRLSGQQLAFAIDYWSSGEMEALFLEHEGYCGALGSFLMSGTEEP 729
            VSI+KVDGPAKF+RVSGSSIGGGTYWGLCRLLTGAT YD+SLD+A +G+SD+VDMLVGDIYG GY+KFQLSS+T+ASSFGK+   E P +   GV  +D+ ++L+VM+TMNIGQVAYLNAKL++TRRIYFVGNFLRHN +S Q+LA+AI YWS GEMEALF EHEGY GALG+FL SG E+P
Sbjct:  317 VSILKVDGPAKFERVSGSSIGGGTYWGLCRLLTGATDYDDSLDLADQGESDRVDMLVGDIYGHGYNKFQLSSNTLASSFGKLVTKEDPRE---GVTNEDVSKALIVMVTMNIGQVAYLNAKLYDTRRIYFVGNFLRHNNISAQRLAYAIAYWSGGEMEALFFEHEGYLGALGAFLSSGYEDP 495
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BLAST of mRNA_P-lacustris_contig1003.135.1 vs. uniprot
Match: A0A7S0FNR1_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FNR1_9STRA)

HSP 1 Score: 230 bits (586), Expect = 1.200e-68
Identity = 117/188 (62.23%), Postives = 149/188 (79.26%), Query Frame = 1 
Query:  184 VSIIKVDGPAKFKRVSGSSIGGGTYWGLCRLLTGATTYDESLDMASRGDSDKVDMLVGDIYGRG---YSKFQLSSHTVASSFGKVGGMEAPGKPGSGVGEKDLVRSLLVMITMNIGQVAYLNAKLHNTRRIYFVGNFLRHNRLSGQQLAFAIDYWSSGEMEALFLEHEGYCGALGSFLMS-GTEEPIA 735
            VSI++VDGP + +R+SGS+IGGGTYWGLCRLLT + ++++ +D+A +GD  KVDM+VGDIYG+G     K  LS++ VASSFGK+    A   P  G+ ++DL R+LL+MIT NIGQVAYLNA+LH T+RIYFVGNFLRHN +S Q+LAFAID+WS G+ EALFLEHEGY GALG+FL+S G   P A
Sbjct:    5 VSILRVDGPRQHERISGSTIGGGTYWGLCRLLTNSESFEDVIDLAEKGDPSKVDMMVGDIYGKGSDALEKLGLSANLVASSFGKL---VAKQNPAEGLEQEDLARALLLMITNNIGQVAYLNAQLHKTKRIYFVGNFLRHNVISQQRLAFAIDFWSGGKNEALFLEHEGYFGALGAFLLSQGIPHPTA 189
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BLAST of mRNA_P-lacustris_contig1003.135.1 vs. uniprot
Match: A0A7S2XPQ7_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XPQ7_9STRA)

HSP 1 Score: 229 bits (585), Expect = 2.170e-67
Identity = 116/180 (64.44%), Postives = 142/180 (78.89%), Query Frame = 1 
Query:  184 VSIIKVDGPAKFKRVSGSSIGGGTYWGLCRLLTGATTYDESLDMASRGDSDKVDMLVGDIYGRG---YSKFQLSSHTVASSFGKVGGMEAPGKPGSGVGEKDLVRSLLVMITMNIGQVAYLNAKLHNTRRIYFVGNFLRHNRLSGQQLAFAIDYWSSGEMEALFLEHEGYCGALGSFLMS 714
            VSI++VDGP K +R+SGS+IGGGTYWGLCRLLT    +++ L++A RGD  KVDM+VGDIYG       K  L SH VASSFGK+    A   P SG+ ++DL R+LL+M+T+NIGQV+YLNA+LH T RIYFVGNFLRHN +S Q+LAFAIDYWS G+MEALFLEHEG  GALG+FL+S
Sbjct:  102 VSILRVDGPRKHERISGSTIGGGTYWGLCRLLTDVEDFEDVLNLAERGDPSKVDMMVGDIYGENSDALEKLGLPSHIVASSFGKL---VAKQDPASGIKQEDLARALLLMVTINIGQVSYLNAQLHKTPRIYFVGNFLRHNSISQQRLAFAIDYWSKGKMEALFLEHEGNFGALGAFLLS 278
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BLAST of mRNA_P-lacustris_contig1003.135.1 vs. uniprot
Match: W7TXJ8_9STRA (Type II pantothenate kinase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TXJ8_9STRA)

HSP 1 Score: 240 bits (613), Expect = 2.880e-67
Identity = 117/183 (63.93%), Postives = 146/183 (79.78%), Query Frame = 1 
Query:  184 VSIIKVDGPAKFKRVSGSSIGGGTYWGLCRLLTGATTYDESLDMASRGDSDKVDMLVGDIYGRGYSKFQLSSHTVASSFGKVGGMEAPGKPGSGVGEKDLVRSLLVMITMNIGQVAYLNAKLHNTRRIYFVGNFLRHNRLSGQQLAFAIDYWSSGEMEALFLEHEGYCGALGSFLMSGTEEPI 732
            VSI+KV+GP +++R+SGSS+GGGTYWGLCRLLTG  ++DE LD+A  GD+  VDM VGDIYGRGY KF LSS  +ASSFGK+     PG+    + E+D+ R+LL+MIT NIGQVAYLNA +H    IYFVGNFLRHN++S ++LA+AIDYWS+G+MEALFLEHEGY GALG+FL S   E +
Sbjct:  427 VSILKVEGPGRYERISGSSLGGGTYWGLCRLLTGCKSFDEVLDLAEMGDATMVDMTVGDIYGRGYDKFHLSSSVIASSFGKLATCHDPGEV---IREEDMARALLMMITGNIGQVAYLNAVIHRATHIYFVGNFLRHNKISCRRLAYAIDYWSAGKMEALFLEHEGYFGALGAFLNSSYVEDL 606
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BLAST of mRNA_P-lacustris_contig1003.135.1 vs. uniprot
Match: A0A7S0GF81_9STRA (Hypothetical protein n=4 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GF81_9STRA)

HSP 1 Score: 228 bits (582), Expect = 3.620e-66
Identity = 115/180 (63.89%), Postives = 145/180 (80.56%), Query Frame = 1 
Query:  184 VSIIKVDGPAKFKRVSGSSIGGGTYWGLCRLLTGATTYDESLDMASRGDSDKVDMLVGDIYG---RGYSKFQLSSHTVASSFGKVGGMEAPGKPGSGVGEKDLVRSLLVMITMNIGQVAYLNAKLHNTRRIYFVGNFLRHNRLSGQQLAFAIDYWSSGEMEALFLEHEGYCGALGSFLMS 714
            VSI++VDGP +++R+SGSSIGGGTYWGLCRLLT    +++ LD+ASRG+  K DM+VGDIYG      SK  L S+ VASSFGK+    A   P SG+ ++DL R+LL+MIT NIGQVAYLNA+LHNT RIYFVGNFLRHN++S ++L+++I YWS GEMEALFLEHEGY GALG+FL++
Sbjct:  166 VSILRVDGPRQYERISGSSIGGGTYWGLCRLLTDVEKFEDVLDLASRGNPTKCDMMVGDIYGDNPEALSKLGLPSNIVASSFGKL---VAKQDPASGLKQEDLARALLLMITNNIGQVAYLNAQLHNTSRIYFVGNFLRHNKMSQRRLSYSIHYWSKGEMEALFLEHEGYFGALGAFLLN 342
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BLAST of mRNA_P-lacustris_contig1003.135.1 vs. uniprot
Match: B5YN27_THAPS (Predicted protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YN27_THAPS)

HSP 1 Score: 223 bits (567), Expect = 5.920e-65
Identity = 113/179 (63.13%), Postives = 140/179 (78.21%), Query Frame = 1 
Query:  184 VSIIKVDGPAKFKRVSGSSIGGGTYWGLCRLLTGATTYDESLDMASRGDSDKVDMLVGDIYGR---GYSKFQLSSHTVASSFGKVGGMEAPGKPGSGVGEKDLVRSLLVMITMNIGQVAYLNAKLHNTRRIYFVGNFLRHNRLSGQQLAFAIDYWSSGEMEALFLEHEGYCGALGSFLM 711
            VSI++VDGP + +RVSGS+IGGGTYWGLCRLLTG+ ++ + L++A +GD  KVDM+VGDIYG+      K  L S  VASSFGK+    A   P  G+ E+DL R+LL+M+T NIGQVA+LNA+LH T RIYFVG FL+HN +S Q+LA AIDYWS+G MEALFLEHEGY GALGSFL+
Sbjct:  122 VSILRVDGPRQHERVSGSTIGGGTYWGLCRLLTGSDSFSDVLNLAMKGDPSKVDMMVGDIYGKDSNALEKIGLPSDVVASSFGKL---VAKQNPSEGIKEEDLARALLLMVTNNIGQVAHLNAQLHETSRIYFVGTFLQHNTISQQRLAHAIDYWSNGNMEALFLEHEGYFGALGSFLL 297
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BLAST of mRNA_P-lacustris_contig1003.135.1 vs. uniprot
Match: A0A7S4VDH8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VDH8_9STRA)

HSP 1 Score: 233 bits (595), Expect = 2.890e-64
Identity = 123/206 (59.71%), Postives = 156/206 (75.73%), Query Frame = 1 
Query:  184 VSIIKVDGPAKFKRVSGSSIGGGTYWGLCRLLTGATTYDESLDMASRGDSDKVDMLVGDIYGRG---YSKFQLSSHTVASSFGKVGGMEAPGKPGSGVGEKDLVRSLLVMITMNIGQVAYLNAKLHNTRRIYFVGNFLRHNRLSGQQLAFAIDYWSSGEMEALFLEHEGYCGALGSFLMSG--TEEPIAGGGGPMGH-AASESTED 783
            VSI++VDGP K +RVSGS+IGGGTYWG+CRLLT A  + E L++A RGD  KVDM+VGDIYG+      K  L ++ VASSFGK+    A   P  G+GE+DL  ++L+M+T NIGQVAYLNA LH+T+RI+FVGNFLRHN +S ++L++AI+YWS G MEALFLEHEGY GALG+FL+S   T E  +GGGG   H +A  ST+D
Sbjct:  555 VSILRVDGPRKHERVSGSTIGGGTYWGICRLLTTAKDFQEVLNLAERGDPSKVDMMVGDIYGQNSDALEKLGLPANIVASSFGKL---VAKPNPAEGLGEEDLAHAILLMVTNNIGQVAYLNATLHHTKRIFFVGNFLRHNLISQRRLSYAINYWSKGNMEALFLEHEGYFGALGAFLLSQGITHEDYSGGGGGTKHESAKNSTKD 757
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BLAST of mRNA_P-lacustris_contig1003.135.1 vs. uniprot
Match: A0A7S1ZWH9_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZWH9_TRICV)

HSP 1 Score: 214 bits (545), Expect = 2.910e-63
Identity = 109/176 (61.93%), Postives = 137/176 (77.84%), Query Frame = 1 
Query:  184 VSIIKVDGPAKFKRVSGSSIGGGTYWGLCRLLTGATTYDESLDMASRGDSDKVDMLVGDIYGR---GYSKFQLSSHTVASSFGKVGGMEAPGKPGSGVGEKDLVRSLLVMITMNIGQVAYLNAKLHNTRRIYFVGNFLRHNRLSGQQLAFAIDYWSSGEMEALFLEHEGYCGALGS 702
            VSI++VDGP + +R+SGS+IGGGTYWGLCRLLT A ++D +L +A RGD  KVDM+VGDIYG       K  L S+ VASSFGK+    A   P +G+ ++DL R+LL+M+T NIGQVAYLNA+L+ T+RIYFVGNFLR N +S ++LA+AI YWS GE EALFLEHEGY GALG+
Sbjct:   17 VSILRVDGPRRHERISGSTIGGGTYWGLCRLLTDAESFDHALRLAERGDPSKVDMMVGDIYGEDSDALEKLGLPSNVVASSFGKL---VAKVDPAAGLRQEDLARALLIMVTNNIGQVAYLNARLYGTKRIYFVGNFLRRNAVSQRRLAYAIHYWSGGENEALFLEHEGYFGALGA 189
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BLAST of mRNA_P-lacustris_contig1003.135.1 vs. uniprot
Match: H3G5C9_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G5C9_PHYRM)

HSP 1 Score: 212 bits (539), Expect = 1.670e-62
Identity = 105/175 (60.00%), Postives = 132/175 (75.43%), Query Frame = 1 
Query:  184 VSIIKVDGPAKFKRVSGSSIGGGTYWGLCRLLTGATTYDESLDMASRGDSDKVDMLVGDIYGRGYSKFQLSSHTVASSFGKVGGMEAPGKPGSGVGEKDLVRSLLVMITMNIGQVAYLNAKLHNTRRIYFVGNFLRHNRLSGQQLAFAIDYWSSGEMEALFLEHEGYCGALGSFL 708
            VS++ V GP  ++RVSGSSIGGGTYWGLCRL+T   +YDE+LD+   G +  VDM VGDIYG  Y KF+L + TVASSFGK+  +         V + DL RSLLVMIT NIGQVA+LNA L+ T+ I+FVGNFLRHN++S + LA+AI++WS+G MEA F +HEGY GALG+FL
Sbjct:   11 VSVLYVKGPGDYERVSGSSIGGGTYWGLCRLMTHCESYDEALDLCVHGSNKSVDMSVGDIYGGAYGKFKLPASTVASSFGKMISVSR-----ESVSDADLARSLLVMITQNIGQVAFLNATLYKTKNIFFVGNFLRHNKISSRTLAYAINFWSNGAMEARFCKHEGYLGALGAFL 180
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig1003.135.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LL03_ECTSI1.950e-11491.50Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z2M7_9STRA5.510e-8274.18Fumble-domain-containing protein n=1 Tax=Tribonema... [more]
A0A7S0FNR1_9STRA1.200e-6862.23Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]
A0A7S2XPQ7_9STRA2.170e-6764.44Hypothetical protein n=1 Tax=Attheya septentrional... [more]
W7TXJ8_9STRA2.880e-6763.93Type II pantothenate kinase n=2 Tax=Monodopsidacea... [more]
A0A7S0GF81_9STRA3.620e-6663.89Hypothetical protein n=4 Tax=Proboscia inermis Tax... [more]
B5YN27_THAPS5.920e-6563.13Predicted protein (Fragment) n=1 Tax=Thalassiosira... [more]
A0A7S4VDH8_9STRA2.890e-6459.71Hypothetical protein (Fragment) n=1 Tax=Ditylum br... [more]
A0A7S1ZWH9_TRICV2.910e-6361.93Hypothetical protein (Fragment) n=1 Tax=Trieres ch... [more]
H3G5C9_PHYRM1.670e-6260.00Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig1003contigP-lacustris_contig1003:800..4522 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score358.2
Seed ortholog evalue2.9e-96
Seed eggNOG ortholog2880.D8LL03
Preferred namePANK1
KEGG rclassRC00002,RC00017
KEGG koko:K09680,ko:K12648,ko:K19942
KEGG ReactionR02971,R03018,R04391
KEGG Pathwayko00770,ko01100,ko04621,ko04622,ko04623,ko05160,ko05161,ko05162,ko05164,ko05168,map00770,map01100,map04621,map04622,map04623,map05160,map05161,map05162,map05164,map05168
KEGG ModuleM00120
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000278,GO:0002009,GO:0002165,GO:0003006,GO:0003674,GO:0003824,GO:0004594,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005739,GO:0005740,GO:0005758,GO:0005768,GO:0005819,GO:0005829,GO:0005856,GO:0005886,GO:0006082,GO:0006139,GO:0006163,GO:0006164,GO:0006575,GO:0006725,GO:0006732,GO:0006753,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006979,GO:0007049,GO:0007059,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0007292,GO:0007444,GO:0007472,GO:0007476,GO:0007552,GO:0007560,GO:0007610,GO:0007622,GO:0007623,GO:0007626,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009314,GO:0009628,GO:0009653,GO:0009791,GO:0009886,GO:0009887,GO:0009888,GO:0009987,GO:0010212,GO:0010332,GO:0010564,GO:0010565,GO:0012505,GO:0015630,GO:0015936,GO:0015937,GO:0015939,GO:0016020,GO:0016043,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019216,GO:0019217,GO:0019218,GO:0019222,GO:0019438,GO:0019637,GO:0019693,GO:0019752,GO:0019953,GO:0022412,GO:0022414,GO:0030117,GO:0030118,GO:0030154,GO:0031323,GO:0031410,GO:0031967,GO:0031970,GO:0031974,GO:0031975,GO:0031982,GO:0032465,GO:0032501,GO:0032502,GO:0032504,GO:0032787,GO:0032991,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0035107,GO:0035114,GO:0035120,GO:0035220,GO:0035239,GO:0035295,GO:0040011,GO:0042592,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043436,GO:0043603,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044430,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0045475,GO:0046390,GO:0046483,GO:0048232,GO:0048468,GO:0048475,GO:0048477,GO:0048511,GO:0048512,GO:0048513,GO:0048563,GO:0048569,GO:0048609,GO:0048707,GO:0048729,GO:0048731,GO:0048736,GO:0048737,GO:0048856,GO:0048869,GO:0048878,GO:0050789,GO:0050794,GO:0050896,GO:0051186,GO:0051188,GO:0051302,GO:0051321,GO:0051704,GO:0051716,GO:0051726,GO:0055037,GO:0055086,GO:0055088,GO:0055090,GO:0060429,GO:0060562,GO:0061024,GO:0062012,GO:0065007,GO:0065008,GO:0070013,GO:0070328,GO:0071214,GO:0071478,GO:0071479,GO:0071480,GO:0071704,GO:0071840,GO:0071944,GO:0072521,GO:0072522,GO:0080090,GO:0090207,GO:0090407,GO:0097708,GO:0098796,GO:0104004,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1904251
EggNOG free text desc.pantothenate kinase activity
EggNOG OGsCOG5146@1,KOG2201@2759
EC2.7.1.33
COG Functional cat.H
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko04131
Exons4
Model size1621
Cds size699
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig1003.135.1prot_P-lacustris_contig1003.135.1Pleurocladia lacustris SAG_25_93polypeptideP-lacustris_contig1003 1635..4435 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815270.0903363-UTR-P-lacustris_contig1003:799..16341622815270.0903363-UTR-P-lacustris_contig1003:799..1634Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig1003 800..1634 -
1693493441.0129805-UTR-P-lacustris_contig1003:799..16341693493441.0129805-UTR-P-lacustris_contig1003:799..1634Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig1003 800..1634 -
1622815270.1497045-UTR-P-lacustris_contig1003:4435..45221622815270.1497045-UTR-P-lacustris_contig1003:4435..4522Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig1003 4436..4522 -
1693493441.0713015-UTR-P-lacustris_contig1003:4435..45221693493441.0713015-UTR-P-lacustris_contig1003:4435..4522Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig1003 4436..4522 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815270.101719-CDS-P-lacustris_contig1003:1634..18951622815270.101719-CDS-P-lacustris_contig1003:1634..1895Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1003 1635..1895 -
1693493441.0242546-CDS-P-lacustris_contig1003:1634..18951693493441.0242546-CDS-P-lacustris_contig1003:1634..1895Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1003 1635..1895 -
1622815270.1171784-CDS-P-lacustris_contig1003:2338..25241622815270.1171784-CDS-P-lacustris_contig1003:2338..2524Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1003 2339..2524 -
1693493441.033914-CDS-P-lacustris_contig1003:2338..25241693493441.033914-CDS-P-lacustris_contig1003:2338..2524Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1003 2339..2524 -
1622815270.127239-CDS-P-lacustris_contig1003:3401..35421622815270.127239-CDS-P-lacustris_contig1003:3401..3542Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1003 3402..3542 -
1693493441.0447812-CDS-P-lacustris_contig1003:3401..35421693493441.0447812-CDS-P-lacustris_contig1003:3401..3542Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1003 3402..3542 -
1622815270.1397455-CDS-P-lacustris_contig1003:4324..44351622815270.1397455-CDS-P-lacustris_contig1003:4324..4435Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1003 4325..4435 -
1693493441.058656-CDS-P-lacustris_contig1003:4324..44351693493441.058656-CDS-P-lacustris_contig1003:4324..4435Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1003 4325..4435 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-lacustris_contig1003.135.1

>prot_P-lacustris_contig1003.135.1 ID=prot_P-lacustris_contig1003.135.1|Name=mRNA_P-lacustris_contig1003.135.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=233bp
MRAGVHVQGWSRDCGRTGNDSLSGTCGVVRIRVSIIKVDGPAKFKRVSGS
SIGGGTYWGLCRLLTGATTYDESLDMASRGDSDKVDMLVGDIYGRGYSKF
QLSSHTVASSFGKVGGMEAPGKPGSGVGEKDLVRSLLVMITMNIGQVAYL
NAKLHNTRRIYFVGNFLRHNRLSGQQLAFAIDYWSSGEMEALFLEHEGYC
GALGSFLMSGTEEPIAGGGGPMGHAASESTED*
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mRNA from alignment at P-lacustris_contig1003:800..4522-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-lacustris_contig1003.135.1 ID=mRNA_P-lacustris_contig1003.135.1|Name=mRNA_P-lacustris_contig1003.135.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=3723bp|location=Sequence derived from alignment at P-lacustris_contig1003:800..4522- (Pleurocladia lacustris SAG_25_93)
GGTATATTCCAGCGCTTAGCCGCCACGGCATGTTGGCGCGTGCTTCTGGT
CTTCTGGTTTGGTTTTGTTTTCTGCTCTCGCGTGTCTATGCGCGCAGGAG
TACACGTTCAAGGTTGGTCGCGCGATTGCGGACGAACCGGCAACGACAGC
CTATCCGGCACTTGTGGTGTCGTTAGGATCAGGGTTTCCATCATCAAGGT
GGGCATTTTGGTAATGCTCCACGGCGTTAGTCCGTCTTGCGAGCGACATC
GCAAATGTTGGAATGGTGCACAGTAGTAAATAGCCTTGAGTGCTTTGTCC
CGAAGTGGTGTTCTGGCATCTGTTCTACCGGGAGGAAGTTGAGGGCGATG
CTATGCTGATGCTGATGTGTTTATGTCTACTACACCCTCACAACCCTCCA
ATGTTGAGGTTAAATGTTTGCTTGTATCATCACCGTACTGACCATGTTTT
TTTGTTCTTTCTTTTCTTCTTTCTTCTGCTCGTCGGATTTTTTTGATGTT
TTGGCATTGCAATGGATGTATGCGCACTGTTCGCCGGCCTCGTGGTGTGG
TGCTGTTGACGATCATGCCATGTAGACTTCAAGTCTACAGGACAGGGTCG
ATAGGCGCGACACGGAGACAAGAAGGGAGGGTTAGGGTCAGGGTTACTGT
GTTCAAGTCGAGTCGGGCTTTTGCGTCATGTCATTGCCAGCATCGTTGCC
TTTAGACGGTGCGCCTTTACCTTTGGAACGGCACTCACTTGCCTCACTAC
GTCTCGTTCGCGCGAGTCATACCAATAATGTGTCTCTACGGGTAGGATCG
TTTTCGACTGACCCCCCTTCCCTCACACAAACGAACCAATATAGGTGTAA
CATCATATAGATTGTGTGGCGACAAAGAAAAACATCTCCCCGGTCTGTGG
CATGCTACGGACAACTTCAGACTTGATTTTGTGGCCTTATCTCCCAAGCT
TTTCTGACCCTTGTCACACCCAATCGTTAGGTCGATGGTCCGGCCAAATT
TAAGCGGGTCAGCGGTAGCAGTATCGGTGGGGGCACTTACTGGGGGTTAT
GCCGTCTCCTAACGGGAGCCACTACGTACGACGAGTCTCTGGACATGGCC
AGTCGAGGCGACTCGGACAAGGTGACACGAGATTGATATAATGTGATGGT
ATGATTGATGTGTTTTGTTGAAACAAGATTCCCGGCAGCTTCCCGTCATG
TGGTAGAAAGTTGTACATAATGGGCTTGTTGTTGATACTTTCTAAGCTTG
CGATGAATCAATCACAAGAGGAGGATAGGTTCGCCTAAAAGAGATGGTTT
TGCTAGGTTCTGATCACGGGTCCCACATGTACGGGCATCTGGTTCACGCG
TCTACTTCGGAGGGATGCTGAGCGCAAAGACATGGTCAACTGTTGTTTCT
TAGCCTCCGGGTGATCTACACGAGACCACCACTCTCTCACTAACAACCAC
GCTCTCACGTTCGCGCCGTACAGCACAGGTAGGAGGCACTGTTCTGATCC
TCGTAACAGCGAACATCTGTCCAAATACCCGTTTTCTGCACTTTGATGCC
CATAAGCCTCTGATCGAGGTGTGCACGTTTTCTTTTCAACCAACACAGCC
CATACCAATGACATCACAAAAAATGTTGCAGGTCTCCCGGGAAACGGAGA
TGATACGGTTGCTCAAGTTTTTATTTTCTGCTAAGCTTCCCAGAACATTT
ACAGCAGTAAAACCAGCTGTATCTCCTACTCCTCCTCCAACCTGGGATGG
CAGCCTGGGATGACGCTGTCTGGCTACACCCCTCAGCTATCGTAGCTCCA
CCCCCTACTGCCATCGTTGCGGCACCCTCTCCCATCACCACCCTACGTCA
CGCCCATCTTCAGCAGTCCCACCTCCCGCTTTTTTCTTTCCACCACCTCT
CTCGGTGTGCATGCATCACCAGTGCACCAATGTTTCCCTTTTGTTCAGAC
TAACCCGCCACCATGATGATGCGGCTCTCGCTTTTGTTTCGACCTAAGGT
TGACATGTTGGTCGGCGACATTTATGGCCGAGGGTACAGCAAGTTTCAAC
TTAGCTCCCACACTGTGGCCAGCTCTTTCGGGAAGGTGGGCGGAATGGAG
GCGCCTGGAAAACCGGGGTCTGGGGTCGGCGAGAAAGATCTTGTCCGTTC
GCTGTTGGTGATGATTACCATGAACATCGGGCAGGTGCGTGGGCGTGAAA
AGGAAGGCTGGCTGCTTGAGAATCGCACCTAGTGCAGAAACGTCTTTTCT
TCCAGAGGGGGGGGCGTACTCGAAAGAGTTTCCTGCGTCTGTCCACAAAT
TAGTATAGCCGCACGTCCTGGGGCTGGAAGGTGATGCAATTACTCGGTGA
AGCGAACGATCTTTTGCCACGTGTTGTTTTTCATGTTGAGGTGGCTTCGT
TCCCCCTCATGGAGTAAGCGGCTGCTGTGTCTAGGGCAGAACCTTCGCAG
CGTCGACTTCACCCCTTGTCTGCCCCGACCGGTCCCCCACACCTAGCAAC
GGAGGGATGCAAAGGACGATGGTGTGTGGTTATACCAAACAACTGCCCAC
CCGCATTCATTCATATCCCCCCATCAACTTTCCGACGGACGGTTTGTGCT
TGTGCCGTGCACACGAAAACTGTAAAGGTGGCCTACTTGAATGCCAAGCT
GCACAATACGCGGCGCATCTACTTCGTTGGGAATTTCTTGCGGCACAATC
GCCTATCCGGCCAGCAGTTGGCCTTCGCGATAGACTACTGGAGCAGCGGC
GAGATGGAGGCACTCTTTTTGGAGCACGAAGGGTACTGTGGCGCCCTAGG
ATCTTTTCTCATGTCCGGAACCGAAGAACCGATAGCGGGTGGGGGGGGTC
CCATGGGTCACGCGGCTTCGGAGTCCACCGAGGATTAGGGGTTTCCCGAC
GCAACGTATAATGTTAACGCTTGAGTTTGTTCAGAATGGCGGAACGAGGA
AAAGACGCCTGAAACGTTGAGATATCCTTCAGTAAAGGCAGTAGGATGCC
ATACTTGTGTGTGATGTGCAGTAGTGTGATGCTCCAGCATGAAGTGTTTT
GTATGCCCTGCCGGTATCCTCCATACTACTTACGGTAGTTGTGCTAAGGC
ACTGAGGCTTTGTTTACCCCCCAGCCACATTGACAGATAGTAACAACATC
GAACTAACGGTTGGGCGTCGCTGGTTGTTTTGTTTGTTTTGGTGTTTGAT
TTGATGTGTATGTGTTGACTGGTTGTAGTCTATTTGGTGTCACGTGGGGT
GGGTGTGTTTCCGCCAATCTGTCCTTTTCGTGTCGGTGCCGCCGTGCCGT
ACCGTAGTGTACCGTACCGTACGAGATCATTCGGGTGTTGTCATAGCTTC
CTACGGAATCCCATGTGGGACGCATATGCATCAGCAAGGGATGCGCCCTT
TTTTTCGTCGTGAGGTTCTTACCGCTCTCGGCATCTACAAGTATGGTGTG
TGGCCATTCCTCTGTTTGAGCATTCTTTCCTTGGAATTTCCCGAGGTTGC
TGAGCCTTTGCGTGTCGCCCGATTGTTGCGTGCGTTCCCAAAGGAGTGTT
GTGCTTGAAGCGTGTATCATCGTACAGTATCGTCGTATCGTGGAATTGTA
ACTTGGTGGTGTGATAGGGGTAAGCTAGCCCATTTGTATACAGTGTCGTT
GGCCATACTCGAGGGGAGTTGTTTCTTCAACGGATTGCTCAAGTCCATAA
TTTCAACTTCATGTTCCAAAAAG
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Coding sequence (CDS) from alignment at P-lacustris_contig1003:800..4522-

>mRNA_P-lacustris_contig1003.135.1 ID=mRNA_P-lacustris_contig1003.135.1|Name=mRNA_P-lacustris_contig1003.135.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=1398bp|location=Sequence derived from alignment at P-lacustris_contig1003:800..4522- (Pleurocladia lacustris SAG_25_93)
ATGCGCGCAGGAGTACACGTTCAAGGTTGGTCGCGCGATTGCGGACGAAC
CGGCAACGACAGCCTATCCGGCACTTGTGGTGTCGTTAGGATCAGGGTTT
CCATCATCAAGATGCGCGCAGGAGTACACGTTCAAGGTTGGTCGCGCGAT
TGCGGACGAACCGGCAACGACAGCCTATCCGGCACTTGTGGTGTCGTTAG
GATCAGGGTTTCCATCATCAAGGTCGATGGTCCGGCCAAATTTAAGCGGG
TCAGCGGTAGCAGTATCGGTGGGGGCACTTACTGGGGGTTATGCCGTCTC
CTAACGGGAGCCACTACGTACGACGAGTCTCTGGACATGGCCAGTCGAGG
CGACTCGGACAAGGTCGATGGTCCGGCCAAATTTAAGCGGGTCAGCGGTA
GCAGTATCGGTGGGGGCACTTACTGGGGGTTATGCCGTCTCCTAACGGGA
GCCACTACGTACGACGAGTCTCTGGACATGGCCAGTCGAGGCGACTCGGA
CAAGGTTGACATGTTGGTCGGCGACATTTATGGCCGAGGGTACAGCAAGT
TTCAACTTAGCTCCCACACTGTGGCCAGCTCTTTCGGGAAGGTGGGCGGA
ATGGAGGCGCCTGGAAAACCGGGGTCTGGGGTCGGCGAGAAAGATCTTGT
CCGTTCGCTGTTGGTGATGATTACCATGAACATCGGGCAGGTTGACATGT
TGGTCGGCGACATTTATGGCCGAGGGTACAGCAAGTTTCAACTTAGCTCC
CACACTGTGGCCAGCTCTTTCGGGAAGGTGGGCGGAATGGAGGCGCCTGG
AAAACCGGGGTCTGGGGTCGGCGAGAAAGATCTTGTCCGTTCGCTGTTGG
TGATGATTACCATGAACATCGGGCAGGTGGCCTACTTGAATGCCAAGCTG
CACAATACGCGGCGCATCTACTTCGTTGGGAATTTCTTGCGGCACAATCG
CCTATCCGGCCAGCAGTTGGCCTTCGCGATAGACTACTGGAGCAGCGGCG
AGATGGAGGCACTCTTTTTGGAGCACGAAGGGTACTGTGGCGCCCTAGGA
TCTTTTCTCATGTCCGGAACCGAAGAACCGATAGCGGGTGGGGGGGGTCC
CATGGGTCACGCGGCTTCGGAGTCCACCGAGGATTAGGTGGCCTACTTGA
ATGCCAAGCTGCACAATACGCGGCGCATCTACTTCGTTGGGAATTTCTTG
CGGCACAATCGCCTATCCGGCCAGCAGTTGGCCTTCGCGATAGACTACTG
GAGCAGCGGCGAGATGGAGGCACTCTTTTTGGAGCACGAAGGGTACTGTG
GCGCCCTAGGATCTTTTCTCATGTCCGGAACCGAAGAACCGATAGCGGGT
GGGGGGGGTCCCATGGGTCACGCGGCTTCGGAGTCCACCGAGGATTAG
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