mRNA_P-lacustris_contig1003.135.1 (mRNA) Pleurocladia lacustris SAG_25_93

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_P-lacustris_contig1003.135.1
Unique Name	mRNA_P-lacustris_contig1003.135.1
Type	mRNA
Organism	Pleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)

Homology

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BLAST of mRNA_P-lacustris_contig1003.135.1 vs. uniprot
Match: D8LL03_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LL03_ECTSI)

HSP 1 Score: 358 bits (920), Expect = 1.950e-114
Identity = 183/200 (91.50%), Postives = 190/200 (95.00%), Query Frame = 1

Query:  184 VSIIKVDGPAKFKRVSGSSIGGGTYWGLCRLLTGATTYDESLDMASRGDSDKVDMLVGDIYGRGYSKFQLSSHTVASSFGKVGGMEAPGKPGSGVGEKDLVRSLLVMITMNIGQVAYLNAKLHNTRRIYFVGNFLRHNRLSGQQLAFAIDYWSSGEMEALFLEHEGYCGALGSFLMSGTEEPIAGGGGPMGHAASESTED 783
            VSIIKVDGPAKFKRVSGSSIGGGTYWGLCRLLT AT+YDESLDMA +G+SDKVDMLVGDIYGRGYSKFQLSS+T+ASSFGKVGGMEAPGKPGSGV E+DLV+SLLVMITMNIGQVAYLNAKLHNTRRIYFVGNFLRHNRLSGQQLAFAIDYWSSGEMEALFLEHEGYCGALGSFLMSGTEEPI GG      AASESTED
Sbjct:  346 VSIIKVDGPAKFKRVSGSSIGGGTYWGLCRLLTEATSYDESLDMARQGNSDKVDMLVGDIYGRGYSKFQLSSNTLASSFGKVGGMEAPGKPGSGVSEEDLVQSLLVMITMNIGQVAYLNAKLHNTRRIYFVGNFLRHNRLSGQQLAFAIDYWSSGEMEALFLEHEGYCGALGSFLMSGTEEPIGGG------AASESTED 539

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BLAST of mRNA_P-lacustris_contig1003.135.1 vs. uniprot
Match: A0A835Z2M7_9STRA (Fumble-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2M7_9STRA)

HSP 1 Score: 273 bits (699), Expect = 5.510e-82
Identity = 135/182 (74.18%), Postives = 160/182 (87.91%), Query Frame = 1

Query:  184 VSIIKVDGPAKFKRVSGSSIGGGTYWGLCRLLTGATTYDESLDMASRGDSDKVDMLVGDIYGRGYSKFQLSSHTVASSFGKVGGMEAPGKPGSGVGEKDLVRSLLVMITMNIGQVAYLNAKLHNTRRIYFVGNFLRHNRLSGQQLAFAIDYWSSGEMEALFLEHEGYCGALGSFLMSGTEEP 729
            VSI+KVDGPAKF+RVSGSSIGGGTYWGLCRLLTGAT YD+SLD+A +G+SD+VDMLVGDIYG GY+KFQLSS+T+ASSFGK+   E P +   GV  +D+ ++L+VM+TMNIGQVAYLNAKL++TRRIYFVGNFLRHN +S Q+LA+AI YWS GEMEALF EHEGY GALG+FL SG E+P
Sbjct:  317 VSILKVDGPAKFERVSGSSIGGGTYWGLCRLLTGATDYDDSLDLADQGESDRVDMLVGDIYGHGYNKFQLSSNTLASSFGKLVTKEDPRE---GVTNEDVSKALIVMVTMNIGQVAYLNAKLYDTRRIYFVGNFLRHNNISAQRLAYAIAYWSGGEMEALFFEHEGYLGALGAFLSSGYEDP 495

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BLAST of mRNA_P-lacustris_contig1003.135.1 vs. uniprot
Match: A0A7S0FNR1_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FNR1_9STRA)

HSP 1 Score: 230 bits (586), Expect = 1.200e-68
Identity = 117/188 (62.23%), Postives = 149/188 (79.26%), Query Frame = 1

Query:  184 VSIIKVDGPAKFKRVSGSSIGGGTYWGLCRLLTGATTYDESLDMASRGDSDKVDMLVGDIYGRG---YSKFQLSSHTVASSFGKVGGMEAPGKPGSGVGEKDLVRSLLVMITMNIGQVAYLNAKLHNTRRIYFVGNFLRHNRLSGQQLAFAIDYWSSGEMEALFLEHEGYCGALGSFLMS-GTEEPIA 735
            VSI++VDGP + +R+SGS+IGGGTYWGLCRLLT + ++++ +D+A +GD  KVDM+VGDIYG+G     K  LS++ VASSFGK+    A   P  G+ ++DL R+LL+MIT NIGQVAYLNA+LH T+RIYFVGNFLRHN +S Q+LAFAID+WS G+ EALFLEHEGY GALG+FL+S G   P A
Sbjct:    5 VSILRVDGPRQHERISGSTIGGGTYWGLCRLLTNSESFEDVIDLAEKGDPSKVDMMVGDIYGKGSDALEKLGLSANLVASSFGKL---VAKQNPAEGLEQEDLARALLLMITNNIGQVAYLNAQLHKTKRIYFVGNFLRHNVISQQRLAFAIDFWSGGKNEALFLEHEGYFGALGAFLLSQGIPHPTA 189

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BLAST of mRNA_P-lacustris_contig1003.135.1 vs. uniprot
Match: A0A7S2XPQ7_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XPQ7_9STRA)

HSP 1 Score: 229 bits (585), Expect = 2.170e-67
Identity = 116/180 (64.44%), Postives = 142/180 (78.89%), Query Frame = 1

Query:  184 VSIIKVDGPAKFKRVSGSSIGGGTYWGLCRLLTGATTYDESLDMASRGDSDKVDMLVGDIYGRG---YSKFQLSSHTVASSFGKVGGMEAPGKPGSGVGEKDLVRSLLVMITMNIGQVAYLNAKLHNTRRIYFVGNFLRHNRLSGQQLAFAIDYWSSGEMEALFLEHEGYCGALGSFLMS 714
            VSI++VDGP K +R+SGS+IGGGTYWGLCRLLT    +++ L++A RGD  KVDM+VGDIYG       K  L SH VASSFGK+    A   P SG+ ++DL R+LL+M+T+NIGQV+YLNA+LH T RIYFVGNFLRHN +S Q+LAFAIDYWS G+MEALFLEHEG  GALG+FL+S
Sbjct:  102 VSILRVDGPRKHERISGSTIGGGTYWGLCRLLTDVEDFEDVLNLAERGDPSKVDMMVGDIYGENSDALEKLGLPSHIVASSFGKL---VAKQDPASGIKQEDLARALLLMVTINIGQVSYLNAQLHKTPRIYFVGNFLRHNSISQQRLAFAIDYWSKGKMEALFLEHEGNFGALGAFLLS 278

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BLAST of mRNA_P-lacustris_contig1003.135.1 vs. uniprot
Match: W7TXJ8_9STRA (Type II pantothenate kinase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TXJ8_9STRA)

HSP 1 Score: 240 bits (613), Expect = 2.880e-67
Identity = 117/183 (63.93%), Postives = 146/183 (79.78%), Query Frame = 1

Query:  184 VSIIKVDGPAKFKRVSGSSIGGGTYWGLCRLLTGATTYDESLDMASRGDSDKVDMLVGDIYGRGYSKFQLSSHTVASSFGKVGGMEAPGKPGSGVGEKDLVRSLLVMITMNIGQVAYLNAKLHNTRRIYFVGNFLRHNRLSGQQLAFAIDYWSSGEMEALFLEHEGYCGALGSFLMSGTEEPI 732
            VSI+KV+GP +++R+SGSS+GGGTYWGLCRLLTG  ++DE LD+A  GD+  VDM VGDIYGRGY KF LSS  +ASSFGK+     PG+    + E+D+ R+LL+MIT NIGQVAYLNA +H    IYFVGNFLRHN++S ++LA+AIDYWS+G+MEALFLEHEGY GALG+FL S   E +
Sbjct:  427 VSILKVEGPGRYERISGSSLGGGTYWGLCRLLTGCKSFDEVLDLAEMGDATMVDMTVGDIYGRGYDKFHLSSSVIASSFGKLATCHDPGEV---IREEDMARALLMMITGNIGQVAYLNAVIHRATHIYFVGNFLRHNKISCRRLAYAIDYWSAGKMEALFLEHEGYFGALGAFLNSSYVEDL 606

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BLAST of mRNA_P-lacustris_contig1003.135.1 vs. uniprot
Match: A0A7S0GF81_9STRA (Hypothetical protein n=4 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GF81_9STRA)

HSP 1 Score: 228 bits (582), Expect = 3.620e-66
Identity = 115/180 (63.89%), Postives = 145/180 (80.56%), Query Frame = 1

Query:  184 VSIIKVDGPAKFKRVSGSSIGGGTYWGLCRLLTGATTYDESLDMASRGDSDKVDMLVGDIYG---RGYSKFQLSSHTVASSFGKVGGMEAPGKPGSGVGEKDLVRSLLVMITMNIGQVAYLNAKLHNTRRIYFVGNFLRHNRLSGQQLAFAIDYWSSGEMEALFLEHEGYCGALGSFLMS 714
            VSI++VDGP +++R+SGSSIGGGTYWGLCRLLT    +++ LD+ASRG+  K DM+VGDIYG      SK  L S+ VASSFGK+    A   P SG+ ++DL R+LL+MIT NIGQVAYLNA+LHNT RIYFVGNFLRHN++S ++L+++I YWS GEMEALFLEHEGY GALG+FL++
Sbjct:  166 VSILRVDGPRQYERISGSSIGGGTYWGLCRLLTDVEKFEDVLDLASRGNPTKCDMMVGDIYGDNPEALSKLGLPSNIVASSFGKL---VAKQDPASGLKQEDLARALLLMITNNIGQVAYLNAQLHNTSRIYFVGNFLRHNKMSQRRLSYSIHYWSKGEMEALFLEHEGYFGALGAFLLN 342

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BLAST of mRNA_P-lacustris_contig1003.135.1 vs. uniprot
Match: B5YN27_THAPS (Predicted protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YN27_THAPS)

HSP 1 Score: 223 bits (567), Expect = 5.920e-65
Identity = 113/179 (63.13%), Postives = 140/179 (78.21%), Query Frame = 1

Query:  184 VSIIKVDGPAKFKRVSGSSIGGGTYWGLCRLLTGATTYDESLDMASRGDSDKVDMLVGDIYGR---GYSKFQLSSHTVASSFGKVGGMEAPGKPGSGVGEKDLVRSLLVMITMNIGQVAYLNAKLHNTRRIYFVGNFLRHNRLSGQQLAFAIDYWSSGEMEALFLEHEGYCGALGSFLM 711
            VSI++VDGP + +RVSGS+IGGGTYWGLCRLLTG+ ++ + L++A +GD  KVDM+VGDIYG+      K  L S  VASSFGK+    A   P  G+ E+DL R+LL+M+T NIGQVA+LNA+LH T RIYFVG FL+HN +S Q+LA AIDYWS+G MEALFLEHEGY GALGSFL+
Sbjct:  122 VSILRVDGPRQHERVSGSTIGGGTYWGLCRLLTGSDSFSDVLNLAMKGDPSKVDMMVGDIYGKDSNALEKIGLPSDVVASSFGKL---VAKQNPSEGIKEEDLARALLLMVTNNIGQVAHLNAQLHETSRIYFVGTFLQHNTISQQRLAHAIDYWSNGNMEALFLEHEGYFGALGSFLL 297

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BLAST of mRNA_P-lacustris_contig1003.135.1 vs. uniprot
Match: A0A7S4VDH8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VDH8_9STRA)

HSP 1 Score: 233 bits (595), Expect = 2.890e-64
Identity = 123/206 (59.71%), Postives = 156/206 (75.73%), Query Frame = 1

Query:  184 VSIIKVDGPAKFKRVSGSSIGGGTYWGLCRLLTGATTYDESLDMASRGDSDKVDMLVGDIYGRG---YSKFQLSSHTVASSFGKVGGMEAPGKPGSGVGEKDLVRSLLVMITMNIGQVAYLNAKLHNTRRIYFVGNFLRHNRLSGQQLAFAIDYWSSGEMEALFLEHEGYCGALGSFLMSG--TEEPIAGGGGPMGH-AASESTED 783
            VSI++VDGP K +RVSGS+IGGGTYWG+CRLLT A  + E L++A RGD  KVDM+VGDIYG+      K  L ++ VASSFGK+    A   P  G+GE+DL  ++L+M+T NIGQVAYLNA LH+T+RI+FVGNFLRHN +S ++L++AI+YWS G MEALFLEHEGY GALG+FL+S   T E  +GGGG   H +A  ST+D
Sbjct:  555 VSILRVDGPRKHERVSGSTIGGGTYWGICRLLTTAKDFQEVLNLAERGDPSKVDMMVGDIYGQNSDALEKLGLPANIVASSFGKL---VAKPNPAEGLGEEDLAHAILLMVTNNIGQVAYLNATLHHTKRIFFVGNFLRHNLISQRRLSYAINYWSKGNMEALFLEHEGYFGALGAFLLSQGITHEDYSGGGGGTKHESAKNSTKD 757

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BLAST of mRNA_P-lacustris_contig1003.135.1 vs. uniprot
Match: A0A7S1ZWH9_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZWH9_TRICV)

HSP 1 Score: 214 bits (545), Expect = 2.910e-63
Identity = 109/176 (61.93%), Postives = 137/176 (77.84%), Query Frame = 1

Query:  184 VSIIKVDGPAKFKRVSGSSIGGGTYWGLCRLLTGATTYDESLDMASRGDSDKVDMLVGDIYGR---GYSKFQLSSHTVASSFGKVGGMEAPGKPGSGVGEKDLVRSLLVMITMNIGQVAYLNAKLHNTRRIYFVGNFLRHNRLSGQQLAFAIDYWSSGEMEALFLEHEGYCGALGS 702
            VSI++VDGP + +R+SGS+IGGGTYWGLCRLLT A ++D +L +A RGD  KVDM+VGDIYG       K  L S+ VASSFGK+    A   P +G+ ++DL R+LL+M+T NIGQVAYLNA+L+ T+RIYFVGNFLR N +S ++LA+AI YWS GE EALFLEHEGY GALG+
Sbjct:   17 VSILRVDGPRRHERISGSTIGGGTYWGLCRLLTDAESFDHALRLAERGDPSKVDMMVGDIYGEDSDALEKLGLPSNVVASSFGKL---VAKVDPAAGLRQEDLARALLIMVTNNIGQVAYLNARLYGTKRIYFVGNFLRRNAVSQRRLAYAIHYWSGGENEALFLEHEGYFGALGA 189

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BLAST of mRNA_P-lacustris_contig1003.135.1 vs. uniprot
Match: H3G5C9_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G5C9_PHYRM)

HSP 1 Score: 212 bits (539), Expect = 1.670e-62
Identity = 105/175 (60.00%), Postives = 132/175 (75.43%), Query Frame = 1

Query:  184 VSIIKVDGPAKFKRVSGSSIGGGTYWGLCRLLTGATTYDESLDMASRGDSDKVDMLVGDIYGRGYSKFQLSSHTVASSFGKVGGMEAPGKPGSGVGEKDLVRSLLVMITMNIGQVAYLNAKLHNTRRIYFVGNFLRHNRLSGQQLAFAIDYWSSGEMEALFLEHEGYCGALGSFL 708
            VS++ V GP  ++RVSGSSIGGGTYWGLCRL+T   +YDE+LD+   G +  VDM VGDIYG  Y KF+L + TVASSFGK+  +         V + DL RSLLVMIT NIGQVA+LNA L+ T+ I+FVGNFLRHN++S + LA+AI++WS+G MEA F +HEGY GALG+FL
Sbjct:   11 VSVLYVKGPGDYERVSGSSIGGGTYWGLCRLMTHCESYDEALDLCVHGSNKSVDMSVGDIYGGAYGKFKLPASTVASSFGKMISVSR-----ESVSDADLARSLLVMITQNIGQVAFLNATLYKTKNIFFVGNFLRHNKISSRTLAYAINFWSNGAMEARFCKHEGYLGALGAFL 180

The following BLAST results are available for this feature:

BLAST of mRNA_P-lacustris_contig1003.135.1 vs. uniprot

BLAST of mRNA_P-lacustris_contig1003.135.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25

ZOOM

x 1

POSITION

0


Match Name	E-value	Identity	Description
D8LL03_ECTSI	1.950e-114	91.50	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
A0A835Z2M7_9STRA	5.510e-82	74.18	Fumble-domain-containing protein n=1 Tax=Tribonema...	[more]
A0A7S0FNR1_9STRA	1.200e-68	62.23	Hypothetical protein n=1 Tax=Minutocellus polymorp...	[more]
A0A7S2XPQ7_9STRA	2.170e-67	64.44	Hypothetical protein n=1 Tax=Attheya septentrional...	[more]
W7TXJ8_9STRA	2.880e-67	63.93	Type II pantothenate kinase n=2 Tax=Monodopsidacea...	[more]
A0A7S0GF81_9STRA	3.620e-66	63.89	Hypothetical protein n=4 Tax=Proboscia inermis Tax...	[more]
B5YN27_THAPS	5.920e-65	63.13	Predicted protein (Fragment) n=1 Tax=Thalassiosira...	[more]
A0A7S4VDH8_9STRA	2.890e-64	59.71	Hypothetical protein (Fragment) n=1 Tax=Ditylum br...	[more]
A0A7S1ZWH9_TRICV	2.910e-63	61.93	Hypothetical protein (Fragment) n=1 Tax=Trieres ch...	[more]
H3G5C9_PHYRM	1.670e-62	60.00	Uncharacterized protein n=1 Tax=Phytophthora ramor...	[more]

Pages

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	358.2
Seed ortholog evalue	2.9e-96
Seed eggNOG ortholog	2880.D8LL03
Preferred name	PANK1
KEGG rclass	RC00002,RC00017
KEGG ko	ko:K09680,ko:K12648,ko:K19942
KEGG Reaction	R02971,R03018,R04391
KEGG Pathway	ko00770,ko01100,ko04621,ko04622,ko04623,ko05160,ko05161,ko05162,ko05164,ko05168,map00770,map01100,map04621,map04622,map04623,map05160,map05161,map05162,map05164,map05168
KEGG Module	M00120
Hectar predicted targeting category	other localisation
GOs	GO:0000003,GO:0000278,GO:0002009,GO:0002165,GO:0003006,GO:0003674,GO:0003824,GO:0004594,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005739,GO:0005740,GO:0005758,GO:0005768,GO:0005819,GO:0005829,GO:0005856,GO:0005886,GO:0006082,GO:0006139,GO:0006163,GO:0006164,GO:0006575,GO:0006725,GO:0006732,GO:0006753,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006979,GO:0007049,GO:0007059,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0007292,GO:0007444,GO:0007472,GO:0007476,GO:0007552,GO:0007560,GO:0007610,GO:0007622,GO:0007623,GO:0007626,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009314,GO:0009628,GO:0009653,GO:0009791,GO:0009886,GO:0009887,GO:0009888,GO:0009987,GO:0010212,GO:0010332,GO:0010564,GO:0010565,GO:0012505,GO:0015630,GO:0015936,GO:0015937,GO:0015939,GO:0016020,GO:0016043,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019216,GO:0019217,GO:0019218,GO:0019222,GO:0019438,GO:0019637,GO:0019693,GO:0019752,GO:0019953,GO:0022412,GO:0022414,GO:0030117,GO:0030118,GO:0030154,GO:0031323,GO:0031410,GO:0031967,GO:0031970,GO:0031974,GO:0031975,GO:0031982,GO:0032465,GO:0032501,GO:0032502,GO:0032504,GO:0032787,GO:0032991,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0035107,GO:0035114,GO:0035120,GO:0035220,GO:0035239,GO:0035295,GO:0040011,GO:0042592,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043436,GO:0043603,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044430,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0045475,GO:0046390,GO:0046483,GO:0048232,GO:0048468,GO:0048475,GO:0048477,GO:0048511,GO:0048512,GO:0048513,GO:0048563,GO:0048569,GO:0048609,GO:0048707,GO:0048729,GO:0048731,GO:0048736,GO:0048737,GO:0048856,GO:0048869,GO:0048878,GO:0050789,GO:0050794,GO:0050896,GO:0051186,GO:0051188,GO:0051302,GO:0051321,GO:0051704,GO:0051716,GO:0051726,GO:0055037,GO:0055086,GO:0055088,GO:0055090,GO:0060429,GO:0060562,GO:0061024,GO:0062012,GO:0065007,GO:0065008,GO:0070013,GO:0070328,GO:0071214,GO:0071478,GO:0071479,GO:0071480,GO:0071704,GO:0071840,GO:0071944,GO:0072521,GO:0072522,GO:0080090,GO:0090207,GO:0090407,GO:0097708,GO:0098796,GO:0104004,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1904251
EggNOG free text desc.	pantothenate kinase activity
EggNOG OGs	COG5146@1,KOG2201@2759
EC	2.7.1.33
COG Functional cat.	H
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
BRITE	ko00000,ko00001,ko00002,ko01000,ko04131
Exons	4
Model size	1621
Cds size	699
Stop	1
Start	1

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_P-lacustris_contig1003.135.1	prot_P-lacustris_contig1003.135.1	Pleurocladia lacustris SAG_25_93	polypeptide	P-lacustris_contig1003 1635..4435 -

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622815270.0903363-UTR-P-lacustris_contig1003:799..1634	1622815270.0903363-UTR-P-lacustris_contig1003:799..1634	Pleurocladia lacustris SAG_25_93	UTR	P-lacustris_contig1003 800..1634 -
1693493441.0129805-UTR-P-lacustris_contig1003:799..1634	1693493441.0129805-UTR-P-lacustris_contig1003:799..1634	Pleurocladia lacustris SAG_25_93	UTR	P-lacustris_contig1003 800..1634 -
1622815270.1497045-UTR-P-lacustris_contig1003:4435..4522	1622815270.1497045-UTR-P-lacustris_contig1003:4435..4522	Pleurocladia lacustris SAG_25_93	UTR	P-lacustris_contig1003 4436..4522 -
1693493441.0713015-UTR-P-lacustris_contig1003:4435..4522	1693493441.0713015-UTR-P-lacustris_contig1003:4435..4522	Pleurocladia lacustris SAG_25_93	UTR	P-lacustris_contig1003 4436..4522 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622815270.101719-CDS-P-lacustris_contig1003:1634..1895	1622815270.101719-CDS-P-lacustris_contig1003:1634..1895	Pleurocladia lacustris SAG_25_93	CDS	P-lacustris_contig1003 1635..1895 -
1693493441.0242546-CDS-P-lacustris_contig1003:1634..1895	1693493441.0242546-CDS-P-lacustris_contig1003:1634..1895	Pleurocladia lacustris SAG_25_93	CDS	P-lacustris_contig1003 1635..1895 -
1622815270.1171784-CDS-P-lacustris_contig1003:2338..2524	1622815270.1171784-CDS-P-lacustris_contig1003:2338..2524	Pleurocladia lacustris SAG_25_93	CDS	P-lacustris_contig1003 2339..2524 -
1693493441.033914-CDS-P-lacustris_contig1003:2338..2524	1693493441.033914-CDS-P-lacustris_contig1003:2338..2524	Pleurocladia lacustris SAG_25_93	CDS	P-lacustris_contig1003 2339..2524 -
1622815270.127239-CDS-P-lacustris_contig1003:3401..3542	1622815270.127239-CDS-P-lacustris_contig1003:3401..3542	Pleurocladia lacustris SAG_25_93	CDS	P-lacustris_contig1003 3402..3542 -
1693493441.0447812-CDS-P-lacustris_contig1003:3401..3542	1693493441.0447812-CDS-P-lacustris_contig1003:3401..3542	Pleurocladia lacustris SAG_25_93	CDS	P-lacustris_contig1003 3402..3542 -
1622815270.1397455-CDS-P-lacustris_contig1003:4324..4435	1622815270.1397455-CDS-P-lacustris_contig1003:4324..4435	Pleurocladia lacustris SAG_25_93	CDS	P-lacustris_contig1003 4325..4435 -
1693493441.058656-CDS-P-lacustris_contig1003:4324..4435	1693493441.058656-CDS-P-lacustris_contig1003:4324..4435	Pleurocladia lacustris SAG_25_93	CDS	P-lacustris_contig1003 4325..4435 -

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at P-lacustris_contig1003:800..4522-
coding sequence from alignment at P-lacustris_contig1003:800..4522-

protein sequence of mRNA_P-lacustris_contig1003.135.1

>prot_P-lacustris_contig1003.135.1 ID=prot_P-lacustris_contig1003.135.1|Name=mRNA_P-lacustris_contig1003.135.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=233bp
MRAGVHVQGWSRDCGRTGNDSLSGTCGVVRIRVSIIKVDGPAKFKRVSGS
SIGGGTYWGLCRLLTGATTYDESLDMASRGDSDKVDMLVGDIYGRGYSKF
QLSSHTVASSFGKVGGMEAPGKPGSGVGEKDLVRSLLVMITMNIGQVAYL
NAKLHNTRRIYFVGNFLRHNRLSGQQLAFAIDYWSSGEMEALFLEHEGYC
GALGSFLMSGTEEPIAGGGGPMGHAASESTED*

mRNA from alignment at P-lacustris_contig1003:800..4522-

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_P-lacustris_contig1003.135.1 ID=mRNA_P-lacustris_contig1003.135.1|Name=mRNA_P-lacustris_contig1003.135.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=3723bp|location=Sequence derived from alignment at P-lacustris_contig1003:800..4522- (Pleurocladia lacustris SAG_25_93)
GGTATATTCCAGCGCTTAGCCGCCACGGCATGTTGGCGCGTGCTTCTGGT
CTTCTGGTTTGGTTTTGTTTTCTGCTCTCGCGTGTCTATGCGCGCAGGAG
TACACGTTCAAGGTTGGTCGCGCGATTGCGGACGAACCGGCAACGACAGC
CTATCCGGCACTTGTGGTGTCGTTAGGATCAGGGTTTCCATCATCAAGGT
GGGCATTTTGGTAATGCTCCACGGCGTTAGTCCGTCTTGCGAGCGACATC
GCAAATGTTGGAATGGTGCACAGTAGTAAATAGCCTTGAGTGCTTTGTCC
CGAAGTGGTGTTCTGGCATCTGTTCTACCGGGAGGAAGTTGAGGGCGATG
CTATGCTGATGCTGATGTGTTTATGTCTACTACACCCTCACAACCCTCCA
ATGTTGAGGTTAAATGTTTGCTTGTATCATCACCGTACTGACCATGTTTT
TTTGTTCTTTCTTTTCTTCTTTCTTCTGCTCGTCGGATTTTTTTGATGTT
TTGGCATTGCAATGGATGTATGCGCACTGTTCGCCGGCCTCGTGGTGTGG
TGCTGTTGACGATCATGCCATGTAGACTTCAAGTCTACAGGACAGGGTCG
ATAGGCGCGACACGGAGACAAGAAGGGAGGGTTAGGGTCAGGGTTACTGT
GTTCAAGTCGAGTCGGGCTTTTGCGTCATGTCATTGCCAGCATCGTTGCC
TTTAGACGGTGCGCCTTTACCTTTGGAACGGCACTCACTTGCCTCACTAC
GTCTCGTTCGCGCGAGTCATACCAATAATGTGTCTCTACGGGTAGGATCG
TTTTCGACTGACCCCCCTTCCCTCACACAAACGAACCAATATAGGTGTAA
CATCATATAGATTGTGTGGCGACAAAGAAAAACATCTCCCCGGTCTGTGG
CATGCTACGGACAACTTCAGACTTGATTTTGTGGCCTTATCTCCCAAGCT
TTTCTGACCCTTGTCACACCCAATCGTTAGGTCGATGGTCCGGCCAAATT
TAAGCGGGTCAGCGGTAGCAGTATCGGTGGGGGCACTTACTGGGGGTTAT
GCCGTCTCCTAACGGGAGCCACTACGTACGACGAGTCTCTGGACATGGCC
AGTCGAGGCGACTCGGACAAGGTGACACGAGATTGATATAATGTGATGGT
ATGATTGATGTGTTTTGTTGAAACAAGATTCCCGGCAGCTTCCCGTCATG
TGGTAGAAAGTTGTACATAATGGGCTTGTTGTTGATACTTTCTAAGCTTG
CGATGAATCAATCACAAGAGGAGGATAGGTTCGCCTAAAAGAGATGGTTT
TGCTAGGTTCTGATCACGGGTCCCACATGTACGGGCATCTGGTTCACGCG
TCTACTTCGGAGGGATGCTGAGCGCAAAGACATGGTCAACTGTTGTTTCT
TAGCCTCCGGGTGATCTACACGAGACCACCACTCTCTCACTAACAACCAC
GCTCTCACGTTCGCGCCGTACAGCACAGGTAGGAGGCACTGTTCTGATCC
TCGTAACAGCGAACATCTGTCCAAATACCCGTTTTCTGCACTTTGATGCC
CATAAGCCTCTGATCGAGGTGTGCACGTTTTCTTTTCAACCAACACAGCC
CATACCAATGACATCACAAAAAATGTTGCAGGTCTCCCGGGAAACGGAGA
TGATACGGTTGCTCAAGTTTTTATTTTCTGCTAAGCTTCCCAGAACATTT
ACAGCAGTAAAACCAGCTGTATCTCCTACTCCTCCTCCAACCTGGGATGG
CAGCCTGGGATGACGCTGTCTGGCTACACCCCTCAGCTATCGTAGCTCCA
CCCCCTACTGCCATCGTTGCGGCACCCTCTCCCATCACCACCCTACGTCA
CGCCCATCTTCAGCAGTCCCACCTCCCGCTTTTTTCTTTCCACCACCTCT
CTCGGTGTGCATGCATCACCAGTGCACCAATGTTTCCCTTTTGTTCAGAC
TAACCCGCCACCATGATGATGCGGCTCTCGCTTTTGTTTCGACCTAAGGT
TGACATGTTGGTCGGCGACATTTATGGCCGAGGGTACAGCAAGTTTCAAC
TTAGCTCCCACACTGTGGCCAGCTCTTTCGGGAAGGTGGGCGGAATGGAG
GCGCCTGGAAAACCGGGGTCTGGGGTCGGCGAGAAAGATCTTGTCCGTTC
GCTGTTGGTGATGATTACCATGAACATCGGGCAGGTGCGTGGGCGTGAAA
AGGAAGGCTGGCTGCTTGAGAATCGCACCTAGTGCAGAAACGTCTTTTCT
TCCAGAGGGGGGGGCGTACTCGAAAGAGTTTCCTGCGTCTGTCCACAAAT
TAGTATAGCCGCACGTCCTGGGGCTGGAAGGTGATGCAATTACTCGGTGA
AGCGAACGATCTTTTGCCACGTGTTGTTTTTCATGTTGAGGTGGCTTCGT
TCCCCCTCATGGAGTAAGCGGCTGCTGTGTCTAGGGCAGAACCTTCGCAG
CGTCGACTTCACCCCTTGTCTGCCCCGACCGGTCCCCCACACCTAGCAAC
GGAGGGATGCAAAGGACGATGGTGTGTGGTTATACCAAACAACTGCCCAC
CCGCATTCATTCATATCCCCCCATCAACTTTCCGACGGACGGTTTGTGCT
TGTGCCGTGCACACGAAAACTGTAAAGGTGGCCTACTTGAATGCCAAGCT
GCACAATACGCGGCGCATCTACTTCGTTGGGAATTTCTTGCGGCACAATC
GCCTATCCGGCCAGCAGTTGGCCTTCGCGATAGACTACTGGAGCAGCGGC
GAGATGGAGGCACTCTTTTTGGAGCACGAAGGGTACTGTGGCGCCCTAGG
ATCTTTTCTCATGTCCGGAACCGAAGAACCGATAGCGGGTGGGGGGGGTC
CCATGGGTCACGCGGCTTCGGAGTCCACCGAGGATTAGGGGTTTCCCGAC
GCAACGTATAATGTTAACGCTTGAGTTTGTTCAGAATGGCGGAACGAGGA
AAAGACGCCTGAAACGTTGAGATATCCTTCAGTAAAGGCAGTAGGATGCC
ATACTTGTGTGTGATGTGCAGTAGTGTGATGCTCCAGCATGAAGTGTTTT
GTATGCCCTGCCGGTATCCTCCATACTACTTACGGTAGTTGTGCTAAGGC
ACTGAGGCTTTGTTTACCCCCCAGCCACATTGACAGATAGTAACAACATC
GAACTAACGGTTGGGCGTCGCTGGTTGTTTTGTTTGTTTTGGTGTTTGAT
TTGATGTGTATGTGTTGACTGGTTGTAGTCTATTTGGTGTCACGTGGGGT
GGGTGTGTTTCCGCCAATCTGTCCTTTTCGTGTCGGTGCCGCCGTGCCGT
ACCGTAGTGTACCGTACCGTACGAGATCATTCGGGTGTTGTCATAGCTTC
CTACGGAATCCCATGTGGGACGCATATGCATCAGCAAGGGATGCGCCCTT
TTTTTCGTCGTGAGGTTCTTACCGCTCTCGGCATCTACAAGTATGGTGTG
TGGCCATTCCTCTGTTTGAGCATTCTTTCCTTGGAATTTCCCGAGGTTGC
TGAGCCTTTGCGTGTCGCCCGATTGTTGCGTGCGTTCCCAAAGGAGTGTT
GTGCTTGAAGCGTGTATCATCGTACAGTATCGTCGTATCGTGGAATTGTA
ACTTGGTGGTGTGATAGGGGTAAGCTAGCCCATTTGTATACAGTGTCGTT
GGCCATACTCGAGGGGAGTTGTTTCTTCAACGGATTGCTCAAGTCCATAA
TTTCAACTTCATGTTCCAAAAAG

Coding sequence (CDS) from alignment at P-lacustris_contig1003:800..4522-

>mRNA_P-lacustris_contig1003.135.1 ID=mRNA_P-lacustris_contig1003.135.1|Name=mRNA_P-lacustris_contig1003.135.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=1398bp|location=Sequence derived from alignment at P-lacustris_contig1003:800..4522- (Pleurocladia lacustris SAG_25_93)
ATGCGCGCAGGAGTACACGTTCAAGGTTGGTCGCGCGATTGCGGACGAAC
CGGCAACGACAGCCTATCCGGCACTTGTGGTGTCGTTAGGATCAGGGTTT
CCATCATCAAGATGCGCGCAGGAGTACACGTTCAAGGTTGGTCGCGCGAT
TGCGGACGAACCGGCAACGACAGCCTATCCGGCACTTGTGGTGTCGTTAG
GATCAGGGTTTCCATCATCAAGGTCGATGGTCCGGCCAAATTTAAGCGGG
TCAGCGGTAGCAGTATCGGTGGGGGCACTTACTGGGGGTTATGCCGTCTC
CTAACGGGAGCCACTACGTACGACGAGTCTCTGGACATGGCCAGTCGAGG
CGACTCGGACAAGGTCGATGGTCCGGCCAAATTTAAGCGGGTCAGCGGTA
GCAGTATCGGTGGGGGCACTTACTGGGGGTTATGCCGTCTCCTAACGGGA
GCCACTACGTACGACGAGTCTCTGGACATGGCCAGTCGAGGCGACTCGGA
CAAGGTTGACATGTTGGTCGGCGACATTTATGGCCGAGGGTACAGCAAGT
TTCAACTTAGCTCCCACACTGTGGCCAGCTCTTTCGGGAAGGTGGGCGGA
ATGGAGGCGCCTGGAAAACCGGGGTCTGGGGTCGGCGAGAAAGATCTTGT
CCGTTCGCTGTTGGTGATGATTACCATGAACATCGGGCAGGTTGACATGT
TGGTCGGCGACATTTATGGCCGAGGGTACAGCAAGTTTCAACTTAGCTCC
CACACTGTGGCCAGCTCTTTCGGGAAGGTGGGCGGAATGGAGGCGCCTGG
AAAACCGGGGTCTGGGGTCGGCGAGAAAGATCTTGTCCGTTCGCTGTTGG
TGATGATTACCATGAACATCGGGCAGGTGGCCTACTTGAATGCCAAGCTG
CACAATACGCGGCGCATCTACTTCGTTGGGAATTTCTTGCGGCACAATCG
CCTATCCGGCCAGCAGTTGGCCTTCGCGATAGACTACTGGAGCAGCGGCG
AGATGGAGGCACTCTTTTTGGAGCACGAAGGGTACTGTGGCGCCCTAGGA
TCTTTTCTCATGTCCGGAACCGAAGAACCGATAGCGGGTGGGGGGGGTCC
CATGGGTCACGCGGCTTCGGAGTCCACCGAGGATTAGGTGGCCTACTTGA
ATGCCAAGCTGCACAATACGCGGCGCATCTACTTCGTTGGGAATTTCTTG
CGGCACAATCGCCTATCCGGCCAGCAGTTGGCCTTCGCGATAGACTACTG
GAGCAGCGGCGAGATGGAGGCACTCTTTTTGGAGCACGAAGGGTACTGTG
GCGCCCTAGGATCTTTTCTCATGTCCGGAACCGAAGAACCGATAGCGGGT
GGGGGGGGTCCCATGGGTCACGCGGCTTCGGAGTCCACCGAGGATTAG