Homology
BLAST of mRNA_P-lacustris_contig100.105.1 vs. uniprot
Match:
D7FIK3_ECTSI (Tyrosine-protein phosphatase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIK3_ECTSI)
HSP 1 Score: 288 bits (737), Expect = 1.890e-94
Identity = 139/177 (78.53%), Postives = 153/177 (86.44%), Query Frame = 3
Query: 84 LPPDNFSMVDTGIYRSSFPMKKHFPFLRKLGLRTILTLVIEELPPANLDFVQAHGIRLVQIGVEGNKEPFKYIPIEDAQFAVREMSDPNNHPMLVHCNKGKHRTGCLIGCFRRTQGWAVSSIFEEYTHFASPKDRLVDQRYIELFQPEDK-AAGKSAGRSSRVSMTGGTDPPSKVSR 611
PPDNFSMVD GIYRSSFPMKKHFPFLRKLGLRTILTLVIEELPPANLDFVQAHGIRL EPFKYIP+E+ +FAVREMSD +NHPMLVHCNKGKHRTGCLIGCFRRTQGWAVSSIFEEY+HFASPK RLVDQRYIELF+PED+ AA K + +SR+ ++ DPP K++R
Sbjct: 27 FPPDNFSMVDAGIYRSSFPMKKHFPFLRKLGLRTILTLVIEELPPANLDFVQAHGIRL---------EPFKYIPLEEVKFAVREMSDASNHPMLVHCNKGKHRTGCLIGCFRRTQGWAVSSIFEEYSHFASPKARLVDQRYIELFEPEDENAASKKSVLTSRIWISEPADPPGKLAR 194
BLAST of mRNA_P-lacustris_contig100.105.1 vs. uniprot
Match:
A0A835Z5Q6_9STRA (Tyrosine phosphatase family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5Q6_9STRA)
HSP 1 Score: 227 bits (579), Expect = 1.300e-69
Identity = 100/140 (71.43%), Postives = 120/140 (85.71%), Query Frame = 3
Query: 84 LPPDNFSMVDTGIYRSSFPMKKHFPFLRKLGLRTILTLVIEELPPANLDFVQAHGIRLVQIGVEGNKEPFKYIPIEDAQFAVREMSDPNNHPMLVHCNKGKHRTGCLIGCFRRTQGWAVSSIFEEYTHFASPKDRLVDQR 503
PP+NF+MVDTGIYRSSFPMKKHFPFLR+LGL+TILTLV+EE PPAN++F+ A +RLVQIGV+GNKEPFKYIP D AV + D NHP+L+HCNKGKHRTGCL+GC+R+TQ W +SSIF+EY FA+PK R+VDQR
Sbjct: 56 FPPENFAMVDTGIYRSSFPMKKHFPFLRRLGLKTILTLVMEEYPPANMEFLAAENVRLVQIGVDGNKEPFKYIPHVDVVRAVNCIRDRANHPLLIHCNKGKHRTGCLVGCYRKTQQWGLSSIFDEYIRFAAPKSRMVDQR 195
BLAST of mRNA_P-lacustris_contig100.105.1 vs. uniprot
Match:
A0A7S2RJ85_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RJ85_9STRA)
HSP 1 Score: 200 bits (509), Expect = 2.840e-59
Identity = 89/166 (53.61%), Postives = 121/166 (72.89%), Query Frame = 3
Query: 84 LPPDNFSMVDTGIYRSSFPMKKHFPFLRKLGLRTILTLVIEELPPANLDFVQAHGIRLVQIGVEGNKEPFKYIPIEDAQFAVREMSDPNNHPMLVHCNKGKHRTGCLIGCFRRTQGWAVSSIFEEYTHFASPKDRLVDQRYIELFQPEDKAAGKSAGRSSRVSMTG 581
PP NFSMV+ G+YRSSFPMK++F FL+++ L+TIL L++EE P AN F + +GIR +Q G+EGNKEPF+ + + AVR + DP NHP+L+HCN+GKHRTGCL+GC R+ + WA+SSIF+EY +A K RL+DQR+IELF+ E GRS + +G
Sbjct: 15 FPPVNFSMVEPGVYRSSFPMKRNFSFLKRIRLKTILALILEEYPQANTAFNEENGIRFLQFGMEGNKEPFRSMDSSLVRAAVRAIMDPANHPILIHCNEGKHRTGCLVGCLRKARHWALSSIFDEYMLYAGDKGRLIDQRFIELFELESSEDTAEKGRSKGLGTSG 180
BLAST of mRNA_P-lacustris_contig100.105.1 vs. uniprot
Match:
A0A024TXV4_9STRA (Tyrosine-protein phosphatase domain-containing protein n=5 Tax=Aphanomyces TaxID=100860 RepID=A0A024TXV4_9STRA)
HSP 1 Score: 197 bits (502), Expect = 4.250e-59
Identity = 85/148 (57.43%), Postives = 114/148 (77.03%), Query Frame = 3
Query: 84 LPPDNFSMVDTGIYRSSFPMKKHFPFLRKLGLRTILTLVIEELPPANLDFVQAHGIRLVQIGVEGNKEPFKYIPIEDAQFAVREMSDPNNHPMLVHCNKGKHRTGCLIGCFRRTQGWAVSSIFEEYTHFASPKDRLVDQRYIELFQPE 527
+PP+NF+MV+ G+YRS FP KK+FPFL+ LGL++ILTLV+E+ P +N +F + H + L+Q GV GNKEPF IP + A+ + D NHPML+HCNKGKHRTGCL+GC R+ Q WA SSIF+EY F+ PK R++DQ++IELF+ E
Sbjct: 22 IPPENFAMVERGLYRSGFPKKKNFPFLKTLGLKSILTLVLEDYPLSNTEFNKLHNVTLLQFGVPGNKEPFVDIPEKGIAAALSAVLDQRNHPMLIHCNKGKHRTGCLVGCLRKVQRWAFSSIFDEYIRFSHPKPRMMDQQFIELFKTE 169
BLAST of mRNA_P-lacustris_contig100.105.1 vs. uniprot
Match:
A0A1W0A717_9STRA (Tyrosine-protein phosphatase domain-containing protein n=2 Tax=Saprolegniaceae TaxID=4764 RepID=A0A1W0A717_9STRA)
HSP 1 Score: 197 bits (501), Expect = 5.640e-59
Identity = 85/148 (57.43%), Postives = 113/148 (76.35%), Query Frame = 3
Query: 84 LPPDNFSMVDTGIYRSSFPMKKHFPFLRKLGLRTILTLVIEELPPANLDFVQAHGIRLVQIGVEGNKEPFKYIPIEDAQFAVREMSDPNNHPMLVHCNKGKHRTGCLIGCFRRTQGWAVSSIFEEYTHFASPKDRLVDQRYIELFQPE 527
+PP+NF+M++ G+YRS FP KK+FPFL+ LGL++ILTLV+E+ P AN +F + G+ L+Q GV GNKEPF IP + A+ + D NHPML+HCNKGKHRTGCL+GC R+ Q WA SSIF+EY F+ PK R++DQ++IELF E
Sbjct: 18 IPPENFAMIERGLYRSGFPKKKNFPFLKTLGLKSILTLVLEDYPLANCEFNKLQGVTLLQFGVPGNKEPFVDIPEKGIAAALSAVLDKRNHPMLIHCNKGKHRTGCLVGCLRKVQRWAFSSIFDEYIRFSHPKPRMMDQQFIELFNTE 165
BLAST of mRNA_P-lacustris_contig100.105.1 vs. uniprot
Match:
A0A316URE9_9BASI (Tyrosine-protein phosphatase domain-containing protein n=1 Tax=Jaminaea rosea TaxID=1569628 RepID=A0A316URE9_9BASI)
HSP 1 Score: 206 bits (525), Expect = 6.500e-59
Identity = 97/180 (53.89%), Postives = 122/180 (67.78%), Query Frame = 3
Query: 84 LPPDNFSMVDTGIYRSSFPMKKHFPFLRKLGLRTILTLVIEELPPANLDFVQAHGIRLVQIGVEGNKEPFKYIPIEDAQFAVREMSDPNNHPMLVHCNKGKHRTGCLIGCFRRTQGWAVSSIFEEYTHFASPKDRLVDQRYIELFQPEDKAAGKSAGRSSRVSMTGGTDPPSKVSR*NVV 623
LPPDNFSMV+T +YRSSFP KKHFPFLR LGLR++LTL++EE P N F+ + GI Q G+ GNKEPF IP + A+ M D NHPMLVHCNKGKHRTGCLIGC R+ QGW++++IF+EY F++PK R +DQ ++ELF GR R+ GG D + R V+
Sbjct: 263 LPPDNFSMVNTWLYRSSFPKKKHFPFLRTLGLRSVLTLILEEYPDQNTQFLDSEGITFFQFGIPGNKEPFVQIPDDKIAAALCTMLDRRNHPMLVHCNKGKHRTGCLIGCLRKLQGWSLTTIFDEYRRFSAPKSRSMDQEFVELFD---------TGRVWRLMEEGGEDAKRWLPRWRVL 433
BLAST of mRNA_P-lacustris_contig100.105.1 vs. uniprot
Match:
A0A3P3YD33_PLABS (Uncharacterized protein n=2 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A3P3YD33_PLABS)
HSP 1 Score: 197 bits (501), Expect = 2.010e-58
Identity = 83/146 (56.85%), Postives = 113/146 (77.40%), Query Frame = 3
Query: 84 LPPDNFSMVDTGIYRSSFPMKKHFPFLRKLGLRTILTLVIEELPPANLDFVQAHGIRLVQIGVEGNKEPFKYIPIEDAQFAVREMSDPNNHPMLVHCNKGKHRTGCLIGCFRRTQGWAVSSIFEEYTHFASPKDRLVDQRYIELFQ 521
+PPDNF+MVD G+YRSSFP KKHFPFL K+GLRTI+ LV+E+ P NL F++ G RL++ GV GNKEPF I + + A+ + D NHP+L+HCNKGKHRTGCL+GC+R+ Q W+++++F+EY FA PK R +DQ++IE F+
Sbjct: 50 IPPDNFAMVDRGVYRSSFPKKKHFPFLEKIGLRTIVCLVLEDYPEGNLRFLEGIGARLLKFGVAGNKEPFTDISSDVMRSALYAVLDTRNHPVLIHCNKGKHRTGCLVGCYRKVQKWSMTAVFDEYRRFAHPKSRFMDQQFIETFR 195
BLAST of mRNA_P-lacustris_contig100.105.1 vs. uniprot
Match:
A0A067C5D5_SAPPC (Tyrosine-protein phosphatase domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067C5D5_SAPPC)
HSP 1 Score: 195 bits (495), Expect = 4.490e-58
Identity = 83/148 (56.08%), Postives = 113/148 (76.35%), Query Frame = 3
Query: 84 LPPDNFSMVDTGIYRSSFPMKKHFPFLRKLGLRTILTLVIEELPPANLDFVQAHGIRLVQIGVEGNKEPFKYIPIEDAQFAVREMSDPNNHPMLVHCNKGKHRTGCLIGCFRRTQGWAVSSIFEEYTHFASPKDRLVDQRYIELFQPE 527
+PP+NF+MV+ G+YRS FP KK+F F++ LGL++ILTLV+E+ P AN +F + HG+ L+Q GV GNKEPF IP + A+ + D NHPML+HCNKGKHRTGCL+GC R+ Q WA SS+F+EY F+ PK R++DQ++IELF +
Sbjct: 18 IPPENFAMVERGLYRSGFPKKKNFAFVKTLGLKSILTLVLEDYPLANCEFNKIHGVTLLQFGVPGNKEPFVDIPEKGIAAALSAVLDKRNHPMLIHCNKGKHRTGCLVGCLRKVQRWAFSSVFDEYIRFSHPKPRMMDQQFIELFNTD 165
BLAST of mRNA_P-lacustris_contig100.105.1 vs. uniprot
Match:
M5E4E6_MALS4 (Similar to S.cerevisiae protein SIW14 (Tyrosine phosphatase involved in actin organization and endocytosis) n=1 Tax=Malassezia sympodialis (strain ATCC 42132) TaxID=1230383 RepID=M5E4E6_MALS4)
HSP 1 Score: 197 bits (501), Expect = 9.810e-58
Identity = 84/145 (57.93%), Postives = 111/145 (76.55%), Query Frame = 3
Query: 84 LPPDNFSMVDTGIYRSSFPMKKHFPFLRKLGLRTILTLVIEELPPANLDFVQAHGIRLVQIGVEGNKEPFKYIPIEDAQFAVREMSDPNNHPMLVHCNKGKHRTGCLIGCFRRTQGWAVSSIFEEYTHFASPKDRLVDQRYIELF 518
+PPDNF+MV++ +YRSSFP KKHFPFL+ LGLR++LTL++E+ P N+ F+ +GIR Q G+ GNKEPF IP E A+ + D NHPML+HCNKGKHRTGCLIGC R+ Q W++++IF+EY F+ PK R +DQ +IELF
Sbjct: 85 IPPDNFAMVNSWVYRSSFPKKKHFPFLKTLGLRSVLTLILEDYPEQNIQFLDENGIRFFQYGIPGNKEPFVQIPSETIAAALITILDRRNHPMLIHCNKGKHRTGCLIGCLRKLQQWSLTTIFDEYRRFSFPKSRSMDQEFIELF 229
BLAST of mRNA_P-lacustris_contig100.105.1 vs. uniprot
Match:
A0A8H7UJF8_MORIS (Tyrosine-protein phosphatase domain-containing protein n=1 Tax=Mortierella isabellina TaxID=91625 RepID=A0A8H7UJF8_MORIS)
HSP 1 Score: 195 bits (496), Expect = 1.490e-57
Identity = 84/145 (57.93%), Postives = 110/145 (75.86%), Query Frame = 3
Query: 84 LPPDNFSMVDTGIYRSSFPMKKHFPFLRKLGLRTILTLVIEELPPANLDFVQAHGIRLVQIGVEGNKEPFKYIPIEDAQFAVREMSDPNNHPMLVHCNKGKHRTGCLIGCFRRTQGWAVSSIFEEYTHFASPKDRLVDQRYIELF 518
+PP+NF+MV IYRSSFP KKHF FL+KLGL+++LTL++EE P N+ F++ + I+ +Q G+ GNKEPF IP E A+ M D NHPML+HCNKGKHRTGCLIGC R+ Q W+ +SIF+EY F+ PK R +DQ++IELF
Sbjct: 58 IPPENFNMVSEYIYRSSFPKKKHFTFLKKLGLKSVLTLILEEYPAQNMKFLEENNIKFLQFGIAGNKEPFVQIPEEKISAALAAMLDRRNHPMLIHCNKGKHRTGCLIGCLRKLQHWSYTSIFDEYRRFSHPKSRSMDQQFIELF 202
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig100.105.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 1.89e-94 / Id = 78.53 Expect = 1.30e-69 / Id = 71.43 Expect = 2.84e-59 / Id = 53.61 Expect = 4.25e-59 / Id = 57.43 Expect = 5.64e-59 / Id = 57.43 Expect = 6.50e-59 / Id = 53.89 Expect = 2.01e-58 / Id = 56.85 Expect = 4.49e-58 / Id = 56.08 Expect = 9.81e-58 / Id = 57.93 Expect = 1.49e-57 / Id = 57.93 Sequence D7FIK3_ECTSI A0A835Z5Q6_9STRA A0A7S2RJ85_9STRA A0A024TXV4_9STRA A0A1W0A717_9STRA A0A316URE9_9BASI A0A3P3YD33_PLABS A0A067C5D5_SAPPC M5E4E6_MALS4 A0A8H7UJF8_MORIS Pages
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Taxonomic scope Eukaryota Seed ortholog score 273.1 Seed ortholog evalue 8.8e-71 Seed eggNOG ortholog 2880.D7FIK3 Preferred name SIW14 KEGG ko ko:K18045 Hectar predicted targeting category other localisation GOs GO:0003674,GO:0003824,GO:0004721,GO:0004725,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006470,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006897,GO:0006996,GO:0007010,GO:0007015,GO:0008150,GO:0008152,GO:0009987,GO:0016043,GO:0016192,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019538,GO:0023052,GO:0030029,GO:0030036,GO:0035335,GO:0036211,GO:0042578,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0051179,GO:0051234,GO:0071704,GO:0071840,GO:0097435,GO:0098657,GO:0140096,GO:1901564 EggNOG free text desc. protein tyrosine phosphatase activity EggNOG OGs COG2365@1,KOG1572@2759 EC 3.1.3.48 COG Functional cat. T Best tax level Eukaryota Best eggNOG OG NA|NA|NA BRITE ko00000,ko01000,ko01009 Exons 7 Model size 1051 Cds size 510 Stop 1 Start 1
Relationships
The following UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622815266.4485588-UTR-P-lacustris_contig100:118761..118865 1622815266.4485588-UTR-P-lacustris_contig100:118761..118865 Pleurocladia lacustris SAG_25_93 UTR P-lacustris_contig100 118762..118865 + 1693493438.626622-UTR-P-lacustris_contig100:118761..118865 1693493438.626622-UTR-P-lacustris_contig100:118761..118865 Pleurocladia lacustris SAG_25_93 UTR P-lacustris_contig100 118762..118865 + 1622815266.6000204-UTR-P-lacustris_contig100:122539..122976 1622815266.6000204-UTR-P-lacustris_contig100:122539..122976 Pleurocladia lacustris SAG_25_93 UTR P-lacustris_contig100 122540..122976 + 1693493438.716233-UTR-P-lacustris_contig100:122539..122976 1693493438.716233-UTR-P-lacustris_contig100:122539..122976 Pleurocladia lacustris SAG_25_93 UTR P-lacustris_contig100 122540..122976 +
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622815266.4614623-CDS-P-lacustris_contig100:118865..118890 1622815266.4614623-CDS-P-lacustris_contig100:118865..118890 Pleurocladia lacustris SAG_25_93 CDS P-lacustris_contig100 118866..118890 + 1693493438.6387541-CDS-P-lacustris_contig100:118865..118890 1693493438.6387541-CDS-P-lacustris_contig100:118865..118890 Pleurocladia lacustris SAG_25_93 CDS P-lacustris_contig100 118866..118890 + 1622815266.5048823-CDS-P-lacustris_contig100:120191..120252 1622815266.5048823-CDS-P-lacustris_contig100:120191..120252 Pleurocladia lacustris SAG_25_93 CDS P-lacustris_contig100 120192..120252 + 1693493438.649844-CDS-P-lacustris_contig100:120191..120252 1693493438.649844-CDS-P-lacustris_contig100:120191..120252 Pleurocladia lacustris SAG_25_93 CDS P-lacustris_contig100 120192..120252 + 1622815266.5196936-CDS-P-lacustris_contig100:120594..120688 1622815266.5196936-CDS-P-lacustris_contig100:120594..120688 Pleurocladia lacustris SAG_25_93 CDS P-lacustris_contig100 120595..120688 + 1693493438.6613753-CDS-P-lacustris_contig100:120594..120688 1693493438.6613753-CDS-P-lacustris_contig100:120594..120688 Pleurocladia lacustris SAG_25_93 CDS P-lacustris_contig100 120595..120688 + 1622815266.5609164-CDS-P-lacustris_contig100:121192..121250 1622815266.5609164-CDS-P-lacustris_contig100:121192..121250 Pleurocladia lacustris SAG_25_93 CDS P-lacustris_contig100 121193..121250 + 1693493438.6712904-CDS-P-lacustris_contig100:121192..121250 1693493438.6712904-CDS-P-lacustris_contig100:121192..121250 Pleurocladia lacustris SAG_25_93 CDS P-lacustris_contig100 121193..121250 + 1622815266.570916-CDS-P-lacustris_contig100:121573..121653 1622815266.570916-CDS-P-lacustris_contig100:121573..121653 Pleurocladia lacustris SAG_25_93 CDS P-lacustris_contig100 121574..121653 + 1693493438.6826198-CDS-P-lacustris_contig100:121573..121653 1693493438.6826198-CDS-P-lacustris_contig100:121573..121653 Pleurocladia lacustris SAG_25_93 CDS P-lacustris_contig100 121574..121653 + 1622815266.5805826-CDS-P-lacustris_contig100:121861..121942 1622815266.5805826-CDS-P-lacustris_contig100:121861..121942 Pleurocladia lacustris SAG_25_93 CDS P-lacustris_contig100 121862..121942 + 1693493438.6911387-CDS-P-lacustris_contig100:121861..121942 1693493438.6911387-CDS-P-lacustris_contig100:121861..121942 Pleurocladia lacustris SAG_25_93 CDS P-lacustris_contig100 121862..121942 + 1622815266.590427-CDS-P-lacustris_contig100:122428..122539 1622815266.590427-CDS-P-lacustris_contig100:122428..122539 Pleurocladia lacustris SAG_25_93 CDS P-lacustris_contig100 122429..122539 + 1693493438.70436-CDS-P-lacustris_contig100:122428..122539 1693493438.70436-CDS-P-lacustris_contig100:122428..122539 Pleurocladia lacustris SAG_25_93 CDS P-lacustris_contig100 122429..122539 +
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-lacustris_contig100.105.1
>prot_P-lacustris_contig100.105.1 ID=prot_P-lacustris_contig100.105.1|Name=mRNA_P-lacustris_contig100.105.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=170bp
MVDTGIYRSSFPMKKHFPFLRKLGLRTILTLVIEELPPANLDFVQAHGIR back to top mRNA from alignment at P-lacustris_contig100:118762..122976+
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-lacustris_contig100.105.1 ID=mRNA_P-lacustris_contig100.105.1|Name=mRNA_P-lacustris_contig100.105.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=4215bp|location=Sequence derived from alignment at P-lacustris_contig100:118762..122976+ (Pleurocladia lacustris SAG_25_93)ATGTCCATCAGCGGTAGTAGTGCTACAGGGCACGCACAGCAGCAACCGCA
GCCACAGCCACTGGAAGATCATGAGGAGGATCTCTTCCTCCAGACAACTT
TTCC ATGGTTGACACAGGCATTTATCGAA GTGAGTCGAGTGTACAGCAGT
ACTGGCTTGCACCGTCCGCTTTTTGGAGTACAAGTGTTTGCACTGGCAGA
AAAAGGGAATAACAAATGCCTTTTCAGCAGGTTCAAATGCTATGGAGTCC
CCCGACCGTTGCTGCTTACCCGCGCTGTTTCTAGAACGCACGCCACGCCG
ATACCGACGTGTCTTCTTCCTGATGATGCTTCACATGAGAGAGCAGGCGG
GGTCAAAAAGGCAAGCTGAGCTACATGTACCTCACAGATGCTCTTCTATG
AATGATTGTTCGACAGCATGCACGTACACCAGCATGCCGAACACGCTTCT
TCTCGATCTGTCCCCCTGACTGAGTGATGACCATATGCATACCATAGAGG
ACTCTCCCGTCCTCTGAAAAAAATCAAGAGGCACCCGAGTTATTGGATCT
CCAGCATTCACCCACATTTACATGTGCGTAGCAAACAAGATCAGGAGTTT
CCTTCCTGTGTGCGACCGGAGGTGGTTCGAATGCGGAGCAATTTTCAGCA
TTCGTCTGCCGCTACTTGCCAGACGTGCCATTCACCGAGCGTGGTTCACA
AATCTCGTCTCAGAAAGTGTGGGTGACGAAAGCGCCTCCAATCCCGCGGT
CTCGGATTCCAGATACCAAATGATCGGGCCGTAACCAAATCGCCACCTAT
TTTGTTGCTCAAGTTAAGATGCTGGAACGCAAAATCCCCGCATTCCCTTA
ATTCCTCGCCCTCACCGGTGTGGTCGTAACCCCCCTCTCCCAAGACCCAA
ACTGGAAAGTGTTGACTTTACACTGCTGCAGCCCGAGGTTATTCTCCATT
TCGTCCAAGACTTAGCAGCCCCCTCTATGAGTTCCCCCGAAGTTGTTCCC
CCCTTTGGTGCAACGCTGAGTGAGAGAGTTAGGGGGCATCTAAAAAAGGG
TTAGCGGTGGGTCATTGGTTCCGTGGGAGACGTTGGACTTCCTTTCCCCG
TACCGTGTGTTTGTTCGTGCTCCGGTAGAGAATGGCTTGGCTCGACCCGA
CATCGCCGGCCCAGGAAGGAAAATCCACAACACAGCACTTGCGGGATTGA
CGGTTGAATGAGCGGGGTATTGTTCTGTTTGCACCCTGATTGATTTCGCC
CGCCTCTCGGAGTTCGTTCGCAGTCAGACGTGATTCTGTCCCCAAGAGCG
CTTACTCTAGGAATCTTGTTGTGGTCTCTGCTGCTGTAACAACCTTGTAT
AGAATATCATTCTTGTGTAAGCCATGTTCCTTTTCGGGGCTCTGCTCGCG
CACTCCGGATTCCTCGACGGCATGCGTCAGGCTCGTTCCCGATGAAGAAG
CACTTCCCGTTTCTGCGAAAGCTCGGCCTACGGACGATACT GTGAGCGAG
AGCGAGAGACGCCATATCGTCGGCTAGTATGTAGCTGCACCACCTTCCAG
TAGCGGCAAACTCCCTAGAAAGGTTGATTCGGTGATGGTAGCGTCGAATG
CGGACAAGTTTTTCGCGACTCCTACTCGTATGCACACTTTTCTCGCTTCC
AACGAGCAGCATCGTCACCACCATTGCCATTTTCGGAAAACTCGCGCTGA
TTTGATTTCTGTCCATCTTTTTTCTCGCTGGTCGGTAGGTGAGTGGGACC
TCGTTTAGCAACACCCCTCCCCTCCTTCTTCTCCCATCTCTCTACCCCGT
TCCGTCGTTGCTGCCGAACGCCCTCTTGCGAAGAACGCTGGTGATTGAAG
AACTCCCACCGGCTAACCTTGACTTCGTACAGGCGCACGGCATCCGACTG
GTGCAGATTGGAGTCGAAGGAAACAAG GTAGCGAAGAGACCTTGATGGAA
ACAAGTGTCGGTCACTATGCTGACTTTTTGTTGCTATCGTAGTCGCGGAG
TACCTAGTCAGTCTTTCAGCGGTATTTGCCGAGCCTGCCACACATTACGA
CATGGAGAGAGAAGGAAAAGGTGCACCACCGTCTCGTCTATATGCTCGTC
TAATGTGGTGCTTCGTTAGCCTTGGACGTTTGTTTTTTGTCACGTCTCTC
CTCCTGTTTGTGGCGGCGCGCACTTTATCTAATGCTAGCCTGGCTCGCTC
TGTTGTTGCGCGCTTCATGCCCTTCTCAGTTCGTTGTTGGTGTTCTTGCT
CGCCCTCGTGCACCACCCCCTCACTCTCTCCCCTTTTCGAACCGGCCAAC
GTTCCCGATGCTTTGTTTTTCAGTTTCGCTTTTCCCATGTAAGAATTTAT
TTTGAACCTTTCTGACCTGGTCTGATTCGTCTATGCGGCTACCCCACCAA
CGCTGTGTCTTATCGTCGTGGAAATTCACAGGAGCCGTTCAAGTACATTC
CTATCGAGGACGCGCAGTTTGCCGTGCGAGAAATGTCAG GCAAGCAAAAA
GTGTAGTGACAAACGTCACAAAAAATATAACACGAAACCCAAGAACGTCA
ACCGAACATGTGTCCTCTTCCTCTTTCATTTGGAAGACAGACGTCGGTCG
TCGGTAGCGGCTGAAGCAGGTATACCATGACATCAGGACACATTTCACGT
AGTGGGGAGGGGCGAGGCTCGCTCGCGTTTGACAAGAAAGGCAGCGCCGG
GGGAGAGATCATGCCCCGCCGAGGTCTCGGAGCATAGGTCTGCCCATCTA
GCCACACCTGCTGGTTTTTTATCAATTCACCGCGCGTTCTACTTTGCCTG
AACGTGAAACAGATCCGAACAACCACCCCATGTTGGTCCACTGCAACAAG
GGGAAGCACCGGACAGGCTGCCTAATCGGCTGCTTCAGAAGG GTGAGAAG
CATCGCCGTTTTTCTTTTAGTTGCACTGCGGCGGCGCGGCGCCTCCGGGG
GCTATTTGGAATATCGTGCTCGGGAAAAGCAGTCCTCGACCGCCAGCACA
CACTTGGCGAGGTTCTGCGTCCATCGCCTTGTTACTCACTTTTCCTCTCC
CCGCACTCCGCCGCGTTTGTGGATTCCTTTTGGTGTGCTCTGCCGACCAG
ACCCAAGGTTGGGCCGTGAGCTCGATCTTCGAGGAGTACACGCATTTCGC
TAGTCCCAAGGACCGGCTTGTCGATCAACGG GTGAGAAGGGCCGACTGCC
TTCGGCTTGTTGTTTCCTGATCGAGCACAAGCCCCGTAGCGCGCGCTGTA
GCAAGCCGAGGCAGTGCAAGGTGGCCTCAGCGCCTTGTCTCCAGGATGCT
CTTGCAAAATGTTGGAGGTCGTACGGCGGGGCCTTCGGGGCTACAAAAGT
GTCGAAACGCGACGAGCTCGGGAGCGTGGGGCGATTGTCGCGTCCCTCGA
GGTGGTAAATGGCAAGGGGAATGACCTTTTCGTGAGTCCTGGCTCGCAGC
TGCGATAGTTCCTCGATGTTGATCTTCGCTTCGACAAAAAGTCGGTGACC
AGGGATAGAAACATTCGACCTGTTCAGGCTCGCGTGGGGTAAATGTTTGC
TATCTAAGGTTGCGGAGCGTATTCCTCGAACTGAGACTCTGCACGCCGCC
CCTCGTTTCCACCACAATGCTGTCCCCACTCTGCGCTGCGTGTTGACTTG
TCTCTGAAATCTGCCAGTACATCGAGCTCTTCCAGCCAGAAGACAAGGCC
GCAGGCAAAAGTGCGGGGCGCTCCTCTCGTGTGTCGATGACAGGGGGTAC
CGACCCACCGAGCAAAGTTTCAAGATAG AACGTGGTGTTTGTTGTGTGTG
TGTTTGTTTTGTGTGCATACTTCACGCTCGAGTCGTATCTGGAATGAGGC
CGTTGCGAGTTGCGGCGCACATGAGTTTTCAGTGTGCGCTCGTCGTCTGT
ACAGCAGTGTTGTGTGGATAGTTTTGTTGTGTGTGAGGATAACATAGACA
ATGTTTTAGAGTGACCACAAAGGTGAAGGAGTCTGTGGTGCTGTCAAGGA
GCCTACCACGGCCTAGGATTCGCCAATTTACGACGACGTGCCCCCGTCTA
GTTTATGGCTACCTGCACGTGCGTACCCAGATCAATTAGATCTTGCCATT
TGTTCTCTTGTAAAGTTAAGTGGAAGAGCTTGCCTAAACACAACGATACA
CGCAGGTCAACAGCAGGAGGTCGTGCCCGAAACCACATCGTGTTGCAGCT
GACTTCAATTCAAAG back to top Coding sequence (CDS) from alignment at P-lacustris_contig100:118762..122976+
>mRNA_P-lacustris_contig100.105.1 ID=mRNA_P-lacustris_contig100.105.1|Name=mRNA_P-lacustris_contig100.105.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=1020bp|location=Sequence derived from alignment at P-lacustris_contig100:118762..122976+ (Pleurocladia lacustris SAG_25_93) back to top