mRNA_P-wetherbeei_contig16353.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig16353.1.1 vs. uniprot
Match: A0A7C4TVL5_9HYPH (Transporter substrate-binding domain-containing protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C4TVL5_9HYPH) HSP 1 Score: 348 bits (894), Expect = 1.450e-118 Identity = 166/242 (68.60%), Postives = 195/242 (80.58%), Query Frame = 1
Query: 100 PEADRAAPRRSILRFLTTNDYPPFNYLDEDSVLTGFHVDLARAICLEMNVTCDVAARPWEELLTALARRQGDAVIAGHTVSARAMTSVDFTDRYFFTPGRFVGRRKGPQLDITPSGLASTRIGVAKGTTHEAYLQTFFLDSAIQSFETQELARDALAGGSVDLVFDDGVSLVLWINGESSKGCCDLRGGPYLEPKYFGDGIAIAVGKADFALRGEVNTAIRKLRASGRFEELVLRYFPYRVF 825
PEA RR +LRF+TTND+PPFN+ DED VLTGF+VDLARAICLE+N+ CDV+ RPWE+L ALARRQ DAVIAGH V+A A+ SVDFTDRY TPGRF GRR P +ITP GL RIGVA+GTTHEAY+Q FF S I+SFE+QELAR+AL VDL+FDDG+SL LW NG SK CC+++GGP+ EPKYFGDG+AIAV K D ALR E+N A+R++RASGRFEEL+LRYFP RVF
Sbjct: 12 PEATDPPERRVVLRFVTTNDFPPFNFEDEDGVLTGFNVDLARAICLELNMPCDVSVRPWEQLFGALARRQADAVIAGHIVTASALASVDFTDRYLHTPGRFAGRRGSPDFEITPDGLEGVRIGVARGTTHEAYVQAFFRGSVIESFESQELAREALMQRKVDLIFDDGISLNLWTNGTLSKECCEIKGGPFFEPKYFGDGLAIAVAKNDRALRAELNEALRRVRASGRFEELLLRYFPDRVF 253
BLAST of mRNA_P-wetherbeei_contig16353.1.1 vs. uniprot
Match: A0A3N5M2T6_9HYPH (ABC transporter substrate-binding protein n=1 Tax=Hyphomicrobiaceae bacterium TaxID=2015799 RepID=A0A3N5M2T6_9HYPH) HSP 1 Score: 327 bits (838), Expect = 1.080e-109 Identity = 149/269 (55.39%), Postives = 203/269 (75.46%), Query Frame = 1
Query: 37 AALCIVAGPV----FSQSSRGPAAGPEAD--RAAPRRSILRFLTTNDYPPFNYLDEDSVLTGFHVDLARAICLEMNVTCDVAARPWEELLTALARRQGDAVIAGHTVSARAMTSVDFTDRYFFTPGRFVGRRKGPQLDITPSGLASTRIGVAKGTTHEAYLQTFFLDSAIQSFETQELARDALAGGSVDLVFDDGVSLVLWINGESSKGCCDLRGGPYLEPKYFGDGIAIAVGKADFALRGEVNTAIRKLRASGRFEELVLRYFPYRVF 825
A LC+VAG V ++ P A PEA+ +A RR+++RFLT DYPPFNYLDED+VLTGF+VD+ARA+CLE+ CD+ RPW +L++AL R + DA+IA H +S + +VDFTDRY+ TPGRF G+R ++++TP GL +I VAKGT HEAYL+ FF DS+I++FET ELARDA+ G+ +L+FDDG+SLV W+NG +SKGCC+ +GGP+ EPKYFGDG+ + VG+ D L+ +N A++ +RA+GR+EEL+LRYFP R F
Sbjct: 9 AGLCLVAGVVGLSGLPLRAQAPQATPEAETAQALSRRAVIRFLTEGDYPPFNYLDEDNVLTGFNVDIARAVCLELAAACDIQVRPWSQLVSALRRGEADAIIASHAISQNLLRAVDFTDRYYHTPGRFAGQRNASRVEVTPEGLEGKKIAVAKGTAHEAYLRAFFSDSSIRTFETPELARDAVITGAAELLFDDGISLVFWLNGTASKGCCEFKGGPFSEPKYFGDGVGVMVGREDQQLKSLINAALKHIRATGRYEELLLRYFPLRAF 277
BLAST of mRNA_P-wetherbeei_contig16353.1.1 vs. uniprot
Match: A0A2S5P8R9_HYPSQ (ABC transporter substrate-binding protein n=2 Tax=Hyphomicrobium sp. TaxID=82 RepID=A0A2S5P8R9_HYPSQ) HSP 1 Score: 323 bits (829), Expect = 1.990e-108 Identity = 152/250 (60.80%), Postives = 190/250 (76.00%), Query Frame = 1
Query: 79 SRGPAAGPEADRA-APRRSILRFLTTNDYPPFNYLDEDSVLTGFHVDLARAICLEMNVTCDVAARPWEELLTALARRQGDAVIAGHTVSARAMTSVDFTDRYFFTPGRFVGRRKGPQLDITPSGLASTRIGVAKGTTHEAYLQTFFLDSAIQSFETQELARDALAGGSVDLVFDDGVSLVLWINGESSKGCCDLRGGPYLEPKYFGDGIAIAVGKADFALRGEVNTAIRKLRASGRFEELVLRYFPYRVF 825
SR P A AD + PRR +LRF+T NDYPPFN+LDED LTGF+VDLARA+CLE+ TCD+ RPW EL+ AL R + DAV+AGHT++A+A+ +FTDRY TPGRF G+R+ Q+DITP GL RI VA+GT HEA+L+ FF DSAIQ+FE +LARDAL G VD +FDDGV L W+NG SK CC+ RGGP+ EPK+FGDGIAIAV ++D +R +NTA+R++R SGR EELV RYFP +V+
Sbjct: 21 SRPPTAAAPADASDLPRRVVLRFVTDNDYPPFNFLDEDGALTGFNVDLARALCLELQATCDIKMRPWAELMLALKRGEADAVVAGHTITAQALAEFEFTDRYLHTPGRFAGQREKRQIDITPEGLDGKRIAVARGTAHEAFLRAFFRDSAIQAFENADLARDALVEGKVDFLFDDGVGLSFWLNGTLSKQCCEFRGGPFFEPKFFGDGIAIAVSRSDPQIRPLLNTALRRVRQSGRLEELVQRYFPLKVY 270
BLAST of mRNA_P-wetherbeei_contig16353.1.1 vs. uniprot
Match: A0A6N6T0Q7_9HYPH (Transporter substrate-binding domain-containing protein n=1 Tax=Hyphomicrobiaceae bacterium TaxID=2015799 RepID=A0A6N6T0Q7_9HYPH) HSP 1 Score: 324 bits (830), Expect = 2.260e-108 Identity = 152/257 (59.14%), Postives = 191/257 (74.32%), Query Frame = 1
Query: 76 SSRGPAAGPEADRAA-------PRRSILRFLTTNDYPPFNYLDEDSVLTGFHVDLARAICLEMNVTCDVAARPWEELLTALARRQGDAVIAGHTVSARAMTSVDFTDRYFFTPGRFVGRRKGPQLDITPSGLASTRIGVAKGTTHEAYLQTFFLDSAIQSFETQELARDALAGGSVDLVFDDGVSLVLWINGESSKGCCDLRGGPYLEPKYFGDGIAIAVGKADFALRGEVNTAIRKLRASGRFEELVLRYFPYRVF 825
+ R PA GP ++A PRR +RFLT +D+PPFNY DED+VLTGF+VD+ARA+CLE+ CD+ RPW ELL AL R + DAVIA H VS A+ +VDFTDRY+ TP RF G+R +L+ITP GL +I V KGT HEAYL+TFF DS+I++FET ELARDAL G+ +L+FDDG+SLV W+NG +SK CC+ +GGP+ EPKYFGDG+ IAV + D LR +NTA+R+LR SGR EEL+LRYFP R F
Sbjct: 28 AQRAPAPGPSPEQALDSKDQGLPRRVAIRFLTDSDFPPFNYFDEDNVLTGFNVDVARAVCLELAAACDIQVRPWAELLPALRRGEADAVIASHAVSGSALRAVDFTDRYYHTPARFAGKRNAGRLEITPEGLEGKKIAVTKGTAHEAYLRTFFRDSSIRAFETPELARDALITGAAELLFDDGLSLVFWLNGTASKACCEFKGGPFAEPKYFGDGVGIAVNREDGQLRTLINTALRRLRESGRMEELLLRYFPLRAF 284
BLAST of mRNA_P-wetherbeei_contig16353.1.1 vs. uniprot
Match: A0A3S0FQH6_9HYPH (Transporter substrate-binding domain-containing protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A3S0FQH6_9HYPH) HSP 1 Score: 322 bits (826), Expect = 5.870e-108 Identity = 152/270 (56.30%), Postives = 200/270 (74.07%), Query Frame = 1
Query: 16 AAILGAVAALCIVAGPVFSQSSRGPAAGPEADRAAPRRSILRFLTTNDYPPFNYLDEDSVLTGFHVDLARAICLEMNVTCDVAARPWEELLTALARRQGDAVIAGHTVSARAMTSVDFTDRYFFTPGRFVGRRKGPQLDITPSGLASTRIGVAKGTTHEAYLQTFFLDSAIQSFETQELARDALAGGSVDLVFDDGVSLVLWINGESSKGCCDLRGGPYLEPKYFGDGIAIAVGKADFALRGEVNTAIRKLRASGRFEELVLRYFPYRVF 825
A I A+ L + P + P A D +A RR++LRFLT +DYPPFNY DED+ LTGF+VD+ARAIC+E+ + CDV RPW ELL AL + + DAVIA H ++A A+ VDF+DRY+FTPGRFVG+R P+LDITP GL +I VAKG+ HEAY++ FF DSAI+ FET ELARD L GSVD++FDDG+SL LW+NG +SK CC+ +GG ++EP++FGDG+ IA+ + D L+ ++N A+RKLR +GR+EE+VLRYFP R F
Sbjct: 3 AKIASALLLLIVGVAPTLLMAQTPPPAADAQDTSA-RRTVLRFLTDSDYPPFNYYDEDNTLTGFNVDMARAICVELALACDVKVRPWAELLPALQKGEADAVIASHALTAAALKGVDFSDRYYFTPGRFVGKRTLPKLDITPEGLEGRKIAVAKGSAHEAYVRAFFRDSAIRVFETVELARDGLLSGSVDVLFDDGISLALWLNGTASKACCEFKGGAFMEPRFFGDGVGIALSRDDPQLKAQINGALRKLRENGRYEEMVLRYFPLRAF 271
BLAST of mRNA_P-wetherbeei_contig16353.1.1 vs. uniprot
Match: A0A7C2QUJ7_9HYPH (Transporter substrate-binding domain-containing protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C2QUJ7_9HYPH) HSP 1 Score: 321 bits (822), Expect = 3.580e-107 Identity = 148/235 (62.98%), Postives = 183/235 (77.87%), Query Frame = 1
Query: 121 PRRSILRFLTTNDYPPFNYLDEDSVLTGFHVDLARAICLEMNVTCDVAARPWEELLTALARRQGDAVIAGHTVSARAMTSVDFTDRYFFTPGRFVGRRKGPQLDITPSGLASTRIGVAKGTTHEAYLQTFFLDSAIQSFETQELARDALAGGSVDLVFDDGVSLVLWINGESSKGCCDLRGGPYLEPKYFGDGIAIAVGKADFALRGEVNTAIRKLRASGRFEELVLRYFPYRVF 825
PRR +RFLT +DYPPFNY DED+VLTGF+VD+ARAICLE+ CD+ RPW ELL AL R + DAVIA H +SA A+ VDFTDRY+ TP RF G+R +L++TP GL +I VA+GT HEAYL+TFF DS+I+ FET ELARDAL G+V+L+FDDG+SL W+NG +SK CC+ +GGP+ EPKYFGDG+ IAV + D LR +N+A+R+LR SGRFEELVLRYFP R F
Sbjct: 49 PRRVAIRFLTDSDYPPFNYFDEDNVLTGFNVDVARAICLELAAACDIQVRPWAELLPALRRGEADAVIASHAISAAALRLVDFTDRYYHTPARFAGKRNSGRLEVTPEGLEGRKIAVARGTAHEAYLRTFFRDSSIRVFETPELARDALVSGTVELLFDDGISLAFWLNGVASKACCEFKGGPFGEPKYFGDGVGIAVNRDDPQLRTLINSALRRLRESGRFEELVLRYFPLRAF 283
BLAST of mRNA_P-wetherbeei_contig16353.1.1 vs. uniprot
Match: A0A433B3C8_HYPSQ (Transporter substrate-binding domain-containing protein n=2 Tax=unclassified Hyphomicrobium TaxID=2619925 RepID=A0A433B3C8_HYPSQ) HSP 1 Score: 315 bits (808), Expect = 5.290e-105 Identity = 144/242 (59.50%), Postives = 185/242 (76.45%), Query Frame = 1
Query: 100 PEADRAAPRRSILRFLTTNDYPPFNYLDEDSVLTGFHVDLARAICLEMNVTCDVAARPWEELLTALARRQGDAVIAGHTVSARAMTSVDFTDRYFFTPGRFVGRRKGPQLDITPSGLASTRIGVAKGTTHEAYLQTFFLDSAIQSFETQELARDALAGGSVDLVFDDGVSLVLWINGESSKGCCDLRGGPYLEPKYFGDGIAIAVGKADFALRGEVNTAIRKLRASGRFEELVLRYFPYRVF 825
P AD A RR ++RFLT +D+PPFN+ DED VL GF++DLARAICLE+ +CD+ ARPWEEL T L + + DAVIA H V+ A+ VDFTDRYF TPGRF GR+ PQ++++PSGL RI VA+GT HEA+L+ FF DS + +E +LAR+ALA G D +FDDG+SL W+NG S+ CC++RGGPYLEPK+FGDGIAIAV K+D +R +N A+ ++RASGRFEELV RYFP R++
Sbjct: 45 PPADAAPTRRVVIRFLTDSDFPPFNFYDEDGVLVGFNIDLARAICLELGTSCDIKARPWEELFTDLKKGEADAVIAAHKVTVSALKDVDFTDRYFHTPGRFAGRKDEPQVEMSPSGLDGKRIAVARGTAHEAFLKAFFRDSPLAIYENADLAREALAAGKADFIFDDGISLAFWLNGTLSRQCCEMRGGPYLEPKFFGDGIAIAVPKSDPGIRLLLNKALDRVRASGRFEELVQRYFPVRIY 286
BLAST of mRNA_P-wetherbeei_contig16353.1.1 vs. uniprot
Match: A0A537RJK1_9PROT (Transporter substrate-binding domain-containing protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537RJK1_9PROT) HSP 1 Score: 312 bits (800), Expect = 7.830e-104 Identity = 144/245 (58.78%), Postives = 183/245 (74.69%), Query Frame = 1
Query: 91 AAGPEADRAAPRRSILRFLTTNDYPPFNYLDEDSVLTGFHVDLARAICLEMNVTCDVAARPWEELLTALARRQGDAVIAGHTVSARAMTSVDFTDRYFFTPGRFVGRRKGPQLDITPSGLASTRIGVAKGTTHEAYLQTFFLDSAIQSFETQELARDALAGGSVDLVFDDGVSLVLWINGESSKGCCDLRGGPYLEPKYFGDGIAIAVGKADFALRGEVNTAIRKLRASGRFEELVLRYFPYRVF 825
AA P + PRR +RFLT +DYPPFNY DED+VLTGF+VD+ARA+CLE+ CD+ RPW ELL AL R + DAVIA H VS+ A+ VDFTDRY+ TP RF G+R +LD TP G +I V KGT HEAYL+TFF DS+I++F+T ELARDAL G+ DL+FDDG++L W+NG +SK CC+ +GGP+ EPKYFGDG+AIAV + D L+ +N A++++R SGR+EELVLRYF R F
Sbjct: 39 AADPAEPQQIPRRVAIRFLTDSDYPPFNYYDEDNVLTGFNVDVARAVCLELAAACDIQVRPWSELLPALRRGETDAVIASHAVSSNALKIVDFTDRYYHTPARFAGKRSAGRLDATPEGFEGKKIAVTKGTAHEAYLRTFFRDSSIRAFDTPELARDALISGATDLLFDDGIALAFWLNGTASKACCEFKGGPFGEPKYFGDGVAIAVNREDPQLKMLINAALKRMRESGRYEELVLRYFLVRAF 283
BLAST of mRNA_P-wetherbeei_contig16353.1.1 vs. uniprot
Match: A0A3S0TRM4_HYPSQ (Transporter substrate-binding domain-containing protein n=1 Tax=Hyphomicrobium sp. TaxID=82 RepID=A0A3S0TRM4_HYPSQ) HSP 1 Score: 311 bits (798), Expect = 1.160e-103 Identity = 148/261 (56.70%), Postives = 193/261 (73.95%), Query Frame = 1
Query: 61 PVFSQSSRGP-----AAGPEADRAA-PRRSILRFLTTNDYPPFNYLDEDSVLTGFHVDLARAICLEMNVTCDVAARPWEELLTALARRQGDAVIAGHTVSARAMTSVDFTDRYFFTPGRFVGRRKGPQLDITPSGLASTRIGVAKGTTHEAYLQTFFLDSAIQSFETQELARDALAGGSVDLVFDDGVSLVLWINGESSKGCCDLRGGPYLEPKYFGDGIAIAVGKADFALRGEVNTAIRKLRASGRFEELVLRYFPYRVF 825
P +QS+ GP A G + +AA PRR ++RFLT +D+PPF++ DED VL GF+VDLARAICLE+N +CD+ RPWEEL+ AL + DAVIAGH V+A A+ VDFTDRYF TPGRF GR+ P+ +++P GL RI VA+GT HEA+L+ FF DS + +E +LAR+ LA G D +FDDG+SL W+NG S+ CC++RGGP+LEPK+FGDGIAIAV K D +R +N A+ ++RASGRFEELV RYFP R++
Sbjct: 14 PSMAQSTGGPDQVGTADGDSSKQAALPRRVVIRFLTDSDFPPFDFYDEDGVLVGFNVDLARAICLELNTSCDIKVRPWEELIPALLKGDADAVIAGHKVTAAALKQVDFTDRYFHTPGRFAGRKDAPESEMSPGGLEGKRIAVARGTPHEAFLRAFFRDSPLVVYENADLAREGLAAGKADYIFDDGISLAFWLNGTLSRQCCEMRGGPFLEPKFFGDGIAIAVPKNDPGIRLLLNKALDRVRASGRFEELVQRYFPVRIY 274
BLAST of mRNA_P-wetherbeei_contig16353.1.1 vs. uniprot
Match: A0A7Y5CYF5_HYPSQ (Transporter substrate-binding domain-containing protein n=1 Tax=Hyphomicrobium sp. TaxID=82 RepID=A0A7Y5CYF5_HYPSQ) HSP 1 Score: 311 bits (796), Expect = 3.390e-103 Identity = 143/246 (58.13%), Postives = 190/246 (77.24%), Query Frame = 1
Query: 88 PAAGPEADRAAPRRSILRFLTTNDYPPFNYLDEDSVLTGFHVDLARAICLEMNVTCDVAARPWEELLTALARRQGDAVIAGHTVSARAMTSVDFTDRYFFTPGRFVGRRKGPQLDITPSGLASTRIGVAKGTTHEAYLQTFFLDSAIQSFETQELARDALAGGSVDLVFDDGVSLVLWINGESSKGCCDLRGGPYLEPKYFGDGIAIAVGKADFALRGEVNTAIRKLRASGRFEELVLRYFPYRVF 825
PAA + A +R ++RFLT +D+PPFN+ DED VL GF++DLARAIC E+ +CD+ ARPWEEL T L + DAVIA H V+++A+ VDFT+RYF TPGRF GR++ L+I+P+GL RI VAKG+THEA+L+TFF DS + FE +LAR+ALA G D+VFDDG+SL W+NG S+ CCD++GGPYLEPK+FGDG+AIAV K+D ++G +N A++++RASGRFEELV RYFP R++
Sbjct: 41 PAAAKDVAPPA-KRVVVRFLTDSDFPPFNFYDEDGVLVGFNIDLARAICTELATSCDIKARPWEELFTGLKSGEADAVIAAHKVTSKAIADVDFTERYFHTPGRFAGRKETTGLEISPAGLDGKRIAVAKGSTHEAFLKTFFRDSPLALFENADLAREALAAGKADIVFDDGISLAFWLNGTLSRQCCDMKGGPYLEPKFFGDGLAIAVPKSDPEIKGMLNDALKRVRASGRFEELVQRYFPVRIY 285 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16353.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig16353.1.1 >prot_P-wetherbeei_contig16353.1.1 ID=prot_P-wetherbeei_contig16353.1.1|Name=mRNA_P-wetherbeei_contig16353.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=276bp MRVVNAAILGAVAALCIVAGPVFSQSSRGPAAGPEADRAAPRRSILRFLTback to top mRNA from alignment at P-wetherbeei_contig16353:18..845+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig16353.1.1 ID=mRNA_P-wetherbeei_contig16353.1.1|Name=mRNA_P-wetherbeei_contig16353.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=828bp|location=Sequence derived from alignment at P-wetherbeei_contig16353:18..845+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig16353:18..845+ >mRNA_P-wetherbeei_contig16353.1.1 ID=mRNA_P-wetherbeei_contig16353.1.1|Name=mRNA_P-wetherbeei_contig16353.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=828bp|location=Sequence derived from alignment at P-wetherbeei_contig16353:18..845+ (Phaeothamnion wetherbeei SAG_119_79)back to top |