prot_P-wetherbeei_contig1635.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig1635.2.1
Unique Nameprot_P-wetherbeei_contig1635.2.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length436
Homology
BLAST of mRNA_P-wetherbeei_contig1635.2.1 vs. uniprot
Match: D8LFM1_ECTSI (Rab3 GTPase-activating protein catalytic subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFM1_ECTSI)

HSP 1 Score: 117 bits (292), Expect = 2.710e-24
Identity = 145/468 (30.98%), Postives = 182/468 (38.89%), Query Frame = 0
Query:   18 LAPPAIALLWSGAPRATPALQPPCPLTADALATQDYSAVAHRAVLTVLSCDMHAFRRANPG-----AVFADFVRWYRPSYWRPSAAGG----------GAGADDPLRTSWPGEGSVEWPVSSAGSSSNTGGPXXXXXXXXXXXSGCSSGE-----------LDVTQWMCAWLEAADA-------------PAPPREAFCEAKEAEKALHALETISVAPLAAQLLHAYLGSAAYWLAHAPSRAARALPAXXXXXXXXXXXXXXXXXXXXXXXXAKLRRAVAARWSPGAEVAAAGGAXXXXLVACQEACAAFAVAERVLARAEAAASAFPGAPSLADRLVSA-------GNDAVVTIADGGREKLAAVALLVDGGFDGGSRVNDGAGTSPECWRRRLPQGQSAAVVLPPAAK----REYVLRCVGLPHSFHAPNVGRRPLLAYPTPPARMFAVTDGEALRVALSLPESEL 435
            L PP   LL SGA    P LQ   P+T D L  Q     A      VL  DM AFR  N G     AVFADFVRWYRP  W+ + A G          G  A+D  R +WPG+G V W   SA +     G               S G+             +  W+  W +A  A                    F    E EKALH LETIS  PL  QLL A LG + + L  A    A +LP+                                        V A+       L+A   AC A   AE  L+RA +   + PG   L + +V+A       G   V   A   +E L  + L        GS +++   +  E  R                      +EYVLRC   P  F++ NVGR  + AYPTPP+RM+A TDG  LRVALSL ES++
Sbjct: 1223 LVPPMRRLLCSGAAVRPPRLQECGPVTEDMLRQQTLGQAAAYRGREVLLADMTAFRSENGGGDGDAAVFADFVRWYRPECWQEATADGEWVSASEGRLGGRAEDDKRLAWPGQGQVVW--RSAVTGRQVHGQNRDEAPEAAAADELSPGDHLGLPPALPSPFTLAGWLSCWGQAGAAVRAEXXXXXXXXXXXXXXXLFSGVTEGEKALHFLETISPGPLLVQLLSALLGLSVFVLEEA-CLGADSLPS----------------------------------------VEASVDTARTALLAADGACVAVKRAETALSRAVSLQRSLPGKKDLVNDMVAACGDEEEKGGGEVPVSARPHKEFLRDLLLAQGIQKTPGSELDELLASYDEEHRXXXXXXXXXXXXXXXXXXXXETKEYVLRCQ-TPAPFYSRNVGRGQMEAYPTPPSRMYAKTDGSNLRVALSLCESDI 1646          
BLAST of mRNA_P-wetherbeei_contig1635.2.1 vs. uniprot
Match: A0A6H5JCY7_9PHAE (Rab3 GTPase-activating protein catalytic subunit n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCY7_9PHAE)

HSP 1 Score: 87.4 bits (215), Expect = 1.430e-14
Identity = 82/238 (34.45%), Postives = 95/238 (39.92%), Query Frame = 0
Query:   18 LAPPAIALLWSGAPRATPALQPPCPLTADALATQDYSAVAHRAVLTVLSCDMHAFRRANPG-----AVFADFVRWYRPSYWRPSAAGG----------GAGADDPLRTSWPGEGSVEWPVSSAGSSSNTGGPXXXXXXXXXXXSGCSSGE-----------LDVTQWMCAWLEAADAPAPPREA-------------FCEAKEAEKALHALETISVAPLAAQLLHAYLGSAAYWLAHA 216
            L PP   LL SGA    P LQ   P+T D L  Q            VL  DM AFR  N G     AVFADFVRWYRP  W+ + A G          G  A+D  R +WPG+G V W  S  G      G               S G+             +  W+  W +A  A    +E              F    E EKALH LETIS  PL  QLL A LG + + L  A
Sbjct: 1231 LVPPMRRLLCSGAAVRPPRLQESGPVTEDMLKQQTLGQAPAYRGREVLLADMTAFRAENDGGDRDAAVFADFVRWYRPECWQETTADGEWVSASEGRLGGRAEDDKRLAWPGQGQVVWKPSVTGHQGQ--GQNWDETPEADAADELSPGDHLGLPPALPSPFKLAGWLSYWGQAGAAVQAEKEXXXXXXXXXXXXPLFSGVTEGEKALHFLETISPGPLLVQLLSALLGLSVFILEEA 1466          
BLAST of mRNA_P-wetherbeei_contig1635.2.1 vs. uniprot
Match: A0A6H5L3A9_9PHAE (Rab3 GTPase-activating protein catalytic subunit n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3A9_9PHAE)

HSP 1 Score: 61.2 bits (147), Expect = 3.030e-6
Identity = 40/99 (40.40%), Postives = 45/99 (45.45%), Query Frame = 0
Query:   25 LLWSGAPRATPALQPPCPLTADAL---------------------ATQDYSAVAHRAVLTVLSCDMHAFRRANPGAVFADFVRWYRPSYWRPSAAGGGA 102
            LL +G     P L P CPLT+D L                     A Q  +  A R  L+ LS DM  F  ANPGAVFADF+RWY P  W     GG A
Sbjct: 1116 LLATGERAVVPELLPACPLTSDMLEQQREIARRLSFAAESSDGFRARQQSNTRASRLRLSTLSADMQCFLSANPGAVFADFLRWYSPPNWSDGPEGGDA 1214          
BLAST of mRNA_P-wetherbeei_contig1635.2.1 vs. uniprot
Match: UPI000CED57EF (LOW QUALITY PROTEIN: rab3 GTPase-activating protein catalytic subunit n=1 Tax=Morus notabilis TaxID=981085 RepID=UPI000CED57EF)

HSP 1 Score: 58.9 bits (141), Expect = 1.430e-5
Identity = 41/141 (29.08%), Postives = 59/141 (41.84%), Query Frame = 0
Query:   64 VLSCDMHAFRRANPGAVFADFVRWYRPSYWRPSAAGGGAGADDPLRTSWPGEGSVEWPVSSAGSSSNTGGPXXXXXXXXXXXSGCSSGELDVTQWMCAWLEAADAPAPPREAFCEA-KEAEKALHALETISVAPLAAQLLH 203
            +LS DM AF+ ANPGAVF DF+RW+ P  W     G  + +  P    WP +G +   +S  G+                              W   W +A   PA  +    +  +E EK LH LET+    L  Q+++
Sbjct:  650 ILSSDMSAFKAANPGAVFEDFIRWHSPGDWEKEIEGSKS-SKSPAEDDWPPQGRLSQRMSEQGN-----------------------------MWRKIWNDAPALPASEQTPLLDPNREGEKILHYLETVRPYQLLEQMVY 760          
BLAST of mRNA_P-wetherbeei_contig1635.2.1 vs. uniprot
Match: UPI001B3BA774 (rab3 GTPase-activating protein catalytic subunit isoform X4 n=1 Tax=Gossypium hirsutum TaxID=3635 RepID=UPI001B3BA774)

HSP 1 Score: 57.4 bits (137), Expect = 4.310e-5
Identity = 43/142 (30.28%), Postives = 60/142 (42.25%), Query Frame = 0
Query:   65 LSCDMHAFRRANPGAVFADFVRWYRPSYWR---PSAAGGGAGADDPLRTSWPGEGSVEWPVSSAGSSSNTGGPXXXXXXXXXXXSGCSSGELDVTQWMCAWLEAADAPAPPREAFCEA-KEAEKALHALETISVAPLAAQLL 202
            LS DM AF+ ANPGAVF DF+RWY P+ W      A G      + +   WP +G +   +S +G+                              W   W EA   PA  ++   +  +E EK LH LET+    L  Q++
Sbjct:  624 LSSDMSAFKAANPGAVFEDFIRWYSPTDWENDESEAKGPSTDLTEGMNVDWPPQGRLSRRMSESGNF-----------------------------WRKIWDEAPILPASEQKPLLDPNREGEKILHYLETMQPHQLLEQMV 736          
BLAST of mRNA_P-wetherbeei_contig1635.2.1 vs. uniprot
Match: A0A1U8PZY1_GOSHI (Rab3 GTPase-activating protein catalytic subunit n=7 Tax=Gossypium TaxID=3633 RepID=A0A1U8PZY1_GOSHI)

HSP 1 Score: 57.4 bits (137), Expect = 4.330e-5
Identity = 43/142 (30.28%), Postives = 60/142 (42.25%), Query Frame = 0
Query:   65 LSCDMHAFRRANPGAVFADFVRWYRPSYWR---PSAAGGGAGADDPLRTSWPGEGSVEWPVSSAGSSSNTGGPXXXXXXXXXXXSGCSSGELDVTQWMCAWLEAADAPAPPREAFCEA-KEAEKALHALETISVAPLAAQLL 202
            LS DM AF+ ANPGAVF DF+RWY P+ W      A G      + +   WP +G +   +S +G+                              W   W EA   PA  ++   +  +E EK LH LET+    L  Q++
Sbjct:  639 LSSDMSAFKAANPGAVFEDFIRWYSPTDWENDESEAKGPSTDLTEGMNVDWPPQGRLSRRMSESGNF-----------------------------WRKIWDEAPILPASEQKPLLDPNREGEKILHYLETMQPHQLLEQMV 751          
BLAST of mRNA_P-wetherbeei_contig1635.2.1 vs. uniprot
Match: A0A7S4IBV9_9EUKA (Rab3 GTPase-activating protein catalytic subunit n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4IBV9_9EUKA)

HSP 1 Score: 56.6 bits (135), Expect = 6.030e-5
Identity = 42/138 (30.43%), Postives = 59/138 (42.75%), Query Frame = 0
Query:   65 LSCDMHAFRRANPGAVFADFVRWYRPSYWRPSAAGGGAGADDPLRTSWPGEGSVEWPVSSAGSSSNTGGPXXXXXXXXXXXSGCSSGELDVTQWMCAWLEAADAPAPPREA-FCEAKEAEKALHALETISVAPLAAQL 201
            L  DM +F+ ANPG VFADFVRWY P+ W    +G  A  D  L +           +    ++ +  G            S  +        W   W+EA   P   ++  F   +E EKA+H LETI+   L  Q+
Sbjct:  267 LKSDMQSFKAANPGCVFADFVRWYSPADWLEENSGDQAREDATLESHG---------IFKESNNEDITGANGIQDKFPGHGSLSARMRAPSNTWRNIWIEAESLPITAQKPLFNYNREGEKAIHYLETITPLDLMQQI 395          
BLAST of mRNA_P-wetherbeei_contig1635.2.1 vs. uniprot
Match: A0A5J5WCN0_GOSBA (Rab3 GTPase-activating protein catalytic subunit n=2 Tax=Gossypium TaxID=3633 RepID=A0A5J5WCN0_GOSBA)

HSP 1 Score: 56.6 bits (135), Expect = 7.520e-5
Identity = 43/142 (30.28%), Postives = 59/142 (41.55%), Query Frame = 0
Query:   65 LSCDMHAFRRANPGAVFADFVRWYRPSYWR---PSAAGGGAGADDPLRTSWPGEGSVEWPVSSAGSSSNTGGPXXXXXXXXXXXSGCSSGELDVTQWMCAWLEAADAPAPPREAFCEA-KEAEKALHALETISVAPLAAQLL 202
            LS DM AF+ ANPGAVF DF+RWY P  W      A G      + +   WP +G +   +S +G+                              W   W EA   PA  ++   +  +E EK LH LET+    L  Q++
Sbjct:  624 LSSDMSAFKAANPGAVFEDFIRWYSPRDWENDESEAKGPSTDLTEGMNVDWPPQGRLSRRMSESGNF-----------------------------WRKIWDEAPILPASEQKPLLDPNREGEKILHYLETMQPHQLLEQMV 736          
BLAST of mRNA_P-wetherbeei_contig1635.2.1 vs. uniprot
Match: A0A5D2R2R7_GOSTO (Rab3 GTPase-activating protein catalytic subunit n=1 Tax=Gossypium tomentosum TaxID=34277 RepID=A0A5D2R2R7_GOSTO)

HSP 1 Score: 56.6 bits (135), Expect = 7.530e-5
Identity = 43/142 (30.28%), Postives = 59/142 (41.55%), Query Frame = 0
Query:   65 LSCDMHAFRRANPGAVFADFVRWYRPSYWR---PSAAGGGAGADDPLRTSWPGEGSVEWPVSSAGSSSNTGGPXXXXXXXXXXXSGCSSGELDVTQWMCAWLEAADAPAPPREAFCEA-KEAEKALHALETISVAPLAAQLL 202
            LS DM AF+ ANPGAVF DF+RWY P  W      A G      + +   WP +G +   +S +G+                              W   W EA   PA  ++   +  +E EK LH LET+    L  Q++
Sbjct:  629 LSSDMSAFKAANPGAVFEDFIRWYSPRDWENDESEAKGPSTDLTEGMNVDWPPQGRLSRGMSESGNF-----------------------------WRKIWDEAPILPASEQKPLLDPNREGEKILHYLETMQPHQLLEQMV 741          
BLAST of mRNA_P-wetherbeei_contig1635.2.1 vs. uniprot
Match: A0A024GG04_9STRA (Rab3 GTPase-activating protein catalytic subunit n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GG04_9STRA)

HSP 1 Score: 56.6 bits (135), Expect = 8.390e-5
Identity = 67/218 (30.73%), Postives = 85/218 (38.99%), Query Frame = 0
Query:   25 LLWSGAPRATPALQPPCPLTADALATQDYSAVAHRAVLT------------------VLSCDMHAFRRANPGAVFADFVRWYRPSYWRPSAAG---GGAGADDPL-----RTSWPGEGSVEWPVSSAGSSSNTGGPXXXXXXXXXXXSGCSSGELDVTQ--WMCAWLEAADAPAPPREA-FCEAKEAEKALHALETISVAPLAAQLLHAYLGSAAYWL 213
            LL +GA    P LQ   PLT D +A Q      H  +LT                   L  DM AF+ ANPGAV ADF+RWY P  W     G     A  +  +      +S P  G  +W  S  G  S    P                 + +VT+  W   W +    P   ++A F    EAEK  H LETI    +  Q+L A +G   Y L
Sbjct:  853 LLLTGATMNEPILQAALPLTED-IAQQ------HEEILTRLGGTSESVRLRQEMQSATLVSDMQAFKAANPGAVLADFIRWYTPKDWTSFEQGFSVSTATEESNMVLSVEESSLPLTGKDKWWFSGKGMLSQRTRPIDDL-------------DSNVTRNLWQDMWEKCCPKPVDEQKALFTPDHEAEKVFHYLETIRPVEMFHQMLVAAMGGCVYTL 1050          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1635.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
D8LFM1_ECTSI2.710e-2430.98Rab3 GTPase-activating protein catalytic subunit n... [more]
A0A6H5JCY7_9PHAE1.430e-1434.45Rab3 GTPase-activating protein catalytic subunit n... [more]
A0A6H5L3A9_9PHAE3.030e-640.40Rab3 GTPase-activating protein catalytic subunit n... [more]
UPI000CED57EF1.430e-529.08LOW QUALITY PROTEIN: rab3 GTPase-activating protei... [more]
UPI001B3BA7744.310e-530.28rab3 GTPase-activating protein catalytic subunit i... [more]
A0A1U8PZY1_GOSHI4.330e-530.28Rab3 GTPase-activating protein catalytic subunit n... [more]
A0A7S4IBV9_9EUKA6.030e-530.43Rab3 GTPase-activating protein catalytic subunit n... [more]
A0A5J5WCN0_GOSBA7.520e-530.28Rab3 GTPase-activating protein catalytic subunit n... [more]
A0A5D2R2R7_GOSTO7.530e-530.28Rab3 GTPase-activating protein catalytic subunit n... [more]
A0A024GG04_9STRA8.390e-530.73Rab3 GTPase-activating protein catalytic subunit n... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR026147Rab3GAP catalytic subunit, conserved domainPFAMPF13890Rab3-GTPase_catcoord: 21..190
e-value: 3.3E-15
score: 56.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 121..147
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 104..147
NoneNo IPR availablePANTHERPTHR21422:SF9RAB3 GTPASE-ACTIVATING PROTEIN CATALYTIC SUBUNITcoord: 7..429
IPR045700Rab3GAP catalytic subunitPANTHERPTHR21422RAB3 GTPASE-ACTIVATING PROTEIN CATALYTIC SUBUNITcoord: 7..429

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1635contigP-wetherbeei_contig1635:4863..6275 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1635.2.1mRNA_P-wetherbeei_contig1635.2.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig1635 4863..6275 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig1635.2.1 ID=prot_P-wetherbeei_contig1635.2.1|Name=mRNA_P-wetherbeei_contig1635.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=436bp
AAGAAGAGAAAAAAAAVLAPPAIALLWSGAPRATPALQPPCPLTADALAT
QDYSAVAHRAVLTVLSCDMHAFRRANPGAVFADFVRWYRPSYWRPSAAGG
GAGADDPLRTSWPGEGSVEWPVSSAGSSSNTGGPDGSNAGGGGGSSGCSS
GELDVTQWMCAWLEAADAPAPPREAFCEAKEAEKALHALETISVAPLAAQ
LLHAYLGSAAYWLAHAPSRAARALPAAAAALDAATTKVDAASAALAAVAA
AKLRRAVAARWSPGAEVAAAGGAAAAALVACQEACAAFAVAERVLARAEA
AASAFPGAPSLADRLVSAGNDAVVTIADGGREKLAAVALLVDGGFDGGSR
VNDGAGTSPECWRRRLPQGQSAAVVLPPAAKREYVLRCVGLPHSFHAPNV
GRRPLLAYPTPPARMFAVTDGEALRVALSLPESEL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR026147Rab3GAP1_conserved
IPR045700Rab3GAP1