mRNA_P-wetherbeei_contig16327.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig16327.1.1 vs. uniprot
Match: D8LE11_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE11_ECTSI) HSP 1 Score: 132 bits (333), Expect = 6.890e-32 Identity = 59/119 (49.58%), Postives = 73/119 (61.34%), Query Frame = 1
Query: 127 QEDPLGCMTEEEVAAFRTKWCANQHPHLAEFCENAHREINKGWLRRNPRGPHFYTARKCPDVTLPDQVQEYENRCRADRDCPMAHSKEELNYHPISYKHRRCNYGRTCRFKALCPFSHV 483
Q DPLG M ++++ FRT WC HPH+ EFCE+ H E+N GWLRR+P H Y R C V LP EY + C R CP AHS EE+ YH SYK + C +G CR KA CP +H+
Sbjct: 535 QADPLGYMNKDQLNKFRTAWCTRSHPHVEEFCEHGHEEVNHGWLRRDP-SKHPYLPRLCERVILPGPGGEYLDDCARGRSCPNAHSLEEIQYHHQSYKTQVCPHGSKCRSKAFCPHAHI 652
BLAST of mRNA_P-wetherbeei_contig16327.1.1 vs. uniprot
Match: A0A7S1DDL3_CYCTE (Hypothetical protein (Fragment) n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1DDL3_CYCTE) HSP 1 Score: 101 bits (252), Expect = 3.830e-21 Identity = 51/124 (41.13%), Postives = 67/124 (54.03%), Query Frame = 1
Query: 115 ELAQQEDPLGCMTEEEVAAFRTKWCANQHPHLAEFCENAHREINKGWLRRNPRGPHFYTARKCP---DVTLPDQVQEYENRCRADRDCPMAHSKEELNYHPISYKHRRCNYG-RTCRFKALCPF 474
+ ++ D LGCM E+A FRT WCA ++ H C AH E+N GW+RRNP+ H Y CP +V Q N CR +CP+AHS+EE+ YHP YK C + C +CPF
Sbjct: 433 DASKSTDVLGCMDSNELAKFRTSWCAKRYDHDHSKCGFAHVEVNNGWIRRNPK-VHQYRPEMCPRVLEVRSEGQRCFVINECRKGNECPLAHSREEIIYHPSFYKTNLCKLASQGCAGGDVCPF 555
BLAST of mRNA_P-wetherbeei_contig16327.1.1 vs. uniprot
Match: A0A7S1ZA35_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZA35_TRICV) HSP 1 Score: 91.7 bits (226), Expect = 1.200e-17 Identity = 54/143 (37.76%), Postives = 67/143 (46.85%), Query Frame = 1
Query: 115 ELAQQEDPLGCMTEEEVAAFRTKWCANQHPHLAEFCENAHREINKGWLRRNPRGPHFYTARKCPDVTLPDQVQEYE------NRCRADRDCPMAHSKEELNYHPISYKHRRCNY-------------GRT--CRFKALCPFSH 480
E Q D LGCM ++ FRT WCA ++ H C AH E+N GWLRRNP Y CP+V V++ N C C MAHSKEE+NYHP YK C+ G+ C + +CPF H
Sbjct: 273 ESFPQHDVLGCMAPPDLHKFRTTWCAKRYEHDPSLCSFAHVEVNGGWLRRNP-AVWVYGVEMCPNV-----VEDASGGGIMINACPHGLACKMAHSKEEVNYHPDRYKRFTCDQMTPPSPRSAGGVGGQVPCCPLQDVCPFHH 409
BLAST of mRNA_P-wetherbeei_contig16327.1.1 vs. uniprot
Match: B8C034_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C034_THAPS) HSP 1 Score: 89.4 bits (220), Expect = 8.390e-17 Identity = 47/114 (41.23%), Postives = 62/114 (54.39%), Query Frame = 1
Query: 148 MTEEEVAAFRTKWCANQHPHLAEFCENAHREINKGWLRRNPRGPHFYTARKCPDVT-LPDQVQEYENRCRADRDCPMAHSKEELNYHPISYKHRRC-NYGRTCRFKALCPFSHV 483
M E+ ++ FRT WCA ++ H E C AH ++N+GWLRR+P + Y CP V L D Y N C C AHSKEE+ YHP SYK C + +C + +CP H
Sbjct: 593 MDEQGLSKFRTTWCAKRYDHDQELCAFAHIDVNRGWLRRDPF-VYNYKPTLCPCVVPLKDAEDCYVNMCPHGVGCNHAHSKEEILYHPESYKRGPCKSQANSCPLRDICPNIHT 705
BLAST of mRNA_P-wetherbeei_contig16327.1.1 vs. uniprot
Match: K0SVD8_THAOC (C3H1-type domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SVD8_THAOC) HSP 1 Score: 79.7 bits (195), Expect = 1.700e-13 Identity = 43/113 (38.05%), Postives = 57/113 (50.44%), Query Frame = 1
Query: 160 EVAAFRTKWCANQHPHLAEFCENAHREINKGWLRRNPRGPHFYTARKCPDVT-LPDQVQEYENRCRADRDCPMAHSKEELNYHPISYKHRRCNYGRTCRFKALCPFSHVPPPS 495
+++ FRT CA ++ H C AH ++N GWLRR+P Y C V L + N C + C AHS+EEL YHP SYK + C G CR +CP H P+
Sbjct: 703 DLSKFRTTQCAKRYDHNHLVCAFAHIDVNSGWLRRDP-SLFDYEPIMCKHVKPLRGSDCHFVNSCPLGKMCKHAHSREELMYHPQSYKLKPCTSGAQCRLSDVCPDIHSDTPT 814
BLAST of mRNA_P-wetherbeei_contig16327.1.1 vs. uniprot
Match: A0A1Y1JIP6_PLAGO (D13 protein n=1 Tax=Plasmodium gonderi TaxID=77519 RepID=A0A1Y1JIP6_PLAGO) HSP 1 Score: 60.5 bits (145), Expect = 5.730e-7 Identity = 41/121 (33.88%), Postives = 56/121 (46.28%), Query Frame = 1
Query: 148 MTEEEVAAFRTKWCANQHPHLAEF----CENAHREINKGWLRRNP---RGPHF--YTARKCPDVTLPDQVQEYENRCRADRDCPMAHSKEELNYHPISYKHRRC-NYGRTCRFKALCPFSH 480
++EE+++ FRTK C F C+ +H E W RR P F Y CPDV + C+ +CP AHS EE+ YHP+ YK +RC +Y + CPF H
Sbjct: 7 LSEEDLSRFRTKQCKRLLNGGCNFGIDRCQYSHNEF---WNRRCPFYLSDSSFIRYITVMCPDVETKSDGS-INSLCQRGGECPFAHSSEEILYHPLYYKTKRCEDYKKGSCNTYYCPFIH 123
BLAST of mRNA_P-wetherbeei_contig16327.1.1 vs. uniprot
Match: A0A1J1GV12_PLAGA (Zinc finger protein, putative n=1 Tax=Plasmodium gallinaceum TaxID=5849 RepID=A0A1J1GV12_PLAGA) HSP 1 Score: 59.3 bits (142), Expect = 1.330e-6 Identity = 41/121 (33.88%), Postives = 55/121 (45.45%), Query Frame = 1
Query: 148 MTEEEVAAFRTKWCANQHPHLAEF----CENAHREINKGWLRRNP---RGPHF--YTARKCPDVTLPDQVQEYENRCRADRDCPMAHSKEELNYHPISYKHRRC-NYGRTCRFKALCPFSH 480
++EE+++ FRTK C F C+ +H E W RR P F Y CPDV + C +CP AHS EE+ YHP+ YK +RC +Y + CPF H
Sbjct: 7 LSEEDLSRFRTKQCKRLLNGGCNFGLDRCQYSHNEF---WNRRCPFYLSDSSFIRYITIMCPDVETKSDGS-INSLCLRGGECPFAHSSEEILYHPLFYKTKRCEDYKKGSCNTYYCPFIH 123
BLAST of mRNA_P-wetherbeei_contig16327.1.1 vs. uniprot
Match: A0A1J1H8E0_PLARL (Zinc finger protein, putative n=1 Tax=Plasmodium relictum TaxID=85471 RepID=A0A1J1H8E0_PLARL) HSP 1 Score: 59.3 bits (142), Expect = 1.340e-6 Identity = 41/121 (33.88%), Postives = 55/121 (45.45%), Query Frame = 1
Query: 148 MTEEEVAAFRTKWCANQHPHLAEF----CENAHREINKGWLRRNP---RGPHF--YTARKCPDVTLPDQVQEYENRCRADRDCPMAHSKEELNYHPISYKHRRC-NYGRTCRFKALCPFSH 480
++EE+++ FRTK C F C+ +H E W RR P F Y CPDV + C +CP AHS EE+ YHP+ YK +RC +Y + CPF H
Sbjct: 7 LSEEDLSRFRTKQCKRLLNGGCNFGLDRCQYSHNEF---WNRRCPFYLSDSSFIRYITIMCPDVETKSDGS-INSLCLRGGECPFAHSSEEILYHPLFYKTKRCEDYKKGSCNTYYCPFIH 123
BLAST of mRNA_P-wetherbeei_contig16327.1.1 vs. uniprot
Match: A0A1A8X1R8_PLAMA (Zinc finger protein, putative n=1 Tax=Plasmodium malariae TaxID=5858 RepID=A0A1A8X1R8_PLAMA) HSP 1 Score: 59.3 bits (142), Expect = 1.400e-6 Identity = 41/121 (33.88%), Postives = 55/121 (45.45%), Query Frame = 1
Query: 148 MTEEEVAAFRTKWCANQHPHLAEF----CENAHREINKGWLRRNP---RGPHF--YTARKCPDVTLPDQVQEYENRCRADRDCPMAHSKEELNYHPISYKHRRC-NYGRTCRFKALCPFSH 480
++EE+++ FRTK C F C+ +H E W RR P F Y CPDV + C +CP AHS EE+ YHP+ YK +RC +Y + CPF H
Sbjct: 7 LSEEDLSRFRTKQCKRLLNGGCNFGLDRCQYSHNEF---WNRRCPFYLSDSSFIRYITVMCPDVETKSDGS-INSLCLRGGECPFAHSSEEILYHPLYYKTKRCEDYKKGSCNTYYCPFIH 123
BLAST of mRNA_P-wetherbeei_contig16327.1.1 vs. uniprot
Match: K6UZ27_PLACD (D13 protein n=1 Tax=Plasmodium cynomolgi (strain B) TaxID=1120755 RepID=K6UZ27_PLACD) HSP 1 Score: 59.3 bits (142), Expect = 1.400e-6 Identity = 41/121 (33.88%), Postives = 56/121 (46.28%), Query Frame = 1
Query: 148 MTEEEVAAFRTKWCANQHPHLAEF----CENAHREINKGWLRRNP---RGPHF--YTARKCPDVTLPDQVQEYENRCRADRDCPMAHSKEELNYHPISYKHRRC-NYGRTCRFKALCPFSH 480
++EE+++ FRTK C F C+ +H E W RR P F Y CPDV + + C +CP AHS EE+ YHP+ YK +RC +Y + CPF H
Sbjct: 7 LSEEDLSRFRTKQCKRLLNGGCNFGIDRCQYSHNEF---WNRRCPFYLSDSSFIRYITIMCPDVETKNDGS-INSLCLRGGECPFAHSAEEILYHPLYYKTKRCEDYKKGSCNTYYCPFIH 123 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16327.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig16327.1.1 >prot_P-wetherbeei_contig16327.1.1 ID=prot_P-wetherbeei_contig16327.1.1|Name=mRNA_P-wetherbeei_contig16327.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=233bp SSVEWQEFLSGGASPGGHSGGGGGHLREPGGYGGGGGIELAQQEDPLGCMback to top mRNA from alignment at P-wetherbeei_contig16327:600..1524- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig16327.1.1 ID=mRNA_P-wetherbeei_contig16327.1.1|Name=mRNA_P-wetherbeei_contig16327.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=925bp|location=Sequence derived from alignment at P-wetherbeei_contig16327:600..1524- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig16327:600..1524- >mRNA_P-wetherbeei_contig16327.1.1 ID=mRNA_P-wetherbeei_contig16327.1.1|Name=mRNA_P-wetherbeei_contig16327.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=699bp|location=Sequence derived from alignment at P-wetherbeei_contig16327:600..1524- (Phaeothamnion wetherbeei SAG_119_79)back to top |