prot_P-wetherbeei_contig16308.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig16308.1.1
Unique Nameprot_P-wetherbeei_contig16308.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length166
Homology
BLAST of mRNA_P-wetherbeei_contig16308.1.1 vs. uniprot
Match: A0A7X8Y0D1_9BURK (Glutamate racemase n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=A0A7X8Y0D1_9BURK)

HSP 1 Score: 192 bits (489), Expect = 1.320e-58
Identity = 101/166 (60.84%), Postives = 119/166 (71.69%), Query Frame = 0
Query:    1 MALGRIGVFDSGVGGLTIAGRLMEEAPHLGIHYFGDTAHVPYGGRPPEEVAMLVEQIVEYLVESGCSAVVMACNTSNAVALDRVKSWCPVPVVGIIEPAARAAMAATRNGRIGVIANPITASSGAYERACAPTLQSMYGPSRNVSVYPVGCPKLVPLIEQGLVHSP 166
            M  G IG+FDSGVGGLT+A R+ +E P     YFGDTAHVPYG R  EEV  LV  I  +LV SG   +VMACNTS+A+ALD V++W PVPV+GIIE A+RAA+ ATRNG +GVIANP+TA SGAYE ACA         +  V V PVGCP+LVPL+E G V SP
Sbjct:    1 MRPGLIGIFDSGVGGLTVADRVRQELPGAPFLYFGDTAHVPYGNRSAEEVRHLVSAIARHLVASGAQVLVMACNTSSALALDLVRAWSPVPVIGIIEAASRAAVQATRNGVVGVIANPLTAGSGAYEEACARASSEAGERAGGVRVLPVGCPRLVPLVEAGEVRSP 166          
BLAST of mRNA_P-wetherbeei_contig16308.1.1 vs. uniprot
Match: A0A355TRC3_9BACT (Glutamate racemase n=1 Tax=bacterium UBP9_UBA11836 TaxID=2060920 RepID=A0A355TRC3_9BACT)

HSP 1 Score: 181 bits (460), Expect = 3.260e-54
Identity = 94/165 (56.97%), Postives = 120/165 (72.73%), Query Frame = 0
Query:    6 IGVFDSGVGGLTIAGRLMEEAPHLGIHYFGDTAHVPYGGRPPEEVAMLVEQIVEYLVESGCSAVVMACNTSNAVALDRVKSWCPVPVVGIIEPAARAAMAATRNGRIGVIANPITASSGAYERACAPT--LQSMYGPS--RNVSVYPVGCPKLVPLIEQGLVHSP 166
            IGVFDSGVGGLT+A ++  E P +   +FGDT HVPYG R   EV  L++ I  +L+ SG   +VMACNTS+A+A D V +W P P++GII+ AA+AA+ ATRNGRIG++ANP+TA+SGAYE+ACA      S+ G +    V V PVGCPKLVPLIE+GLV  P
Sbjct:    7 IGVFDSGVGGLTVAEQIDRELPGVPFIFFGDTQHVPYGNRSVSEVVSLIDAICHHLISSGAEVLVMACNTSSALAFDHVAAWSPAPIIGIIDEAAKAAVRATRNGRIGLMANPLTAASGAYEKACAQAHASASLKGETVASTVKVTPVGCPKLVPLIEKGLVSGP 171          
BLAST of mRNA_P-wetherbeei_contig16308.1.1 vs. uniprot
Match: A0A101EC24_9THEO (Glutamate racemase n=2 Tax=Clostridia TaxID=186801 RepID=A0A101EC24_9THEO)

HSP 1 Score: 152 bits (385), Expect = 5.150e-43
Identity = 82/161 (50.93%), Postives = 109/161 (67.70%), Query Frame = 0
Query:    6 IGVFDSGVGGLTIAGRLMEEAPHLGIHYFGDTAHVPYGGRPPEEVAMLVEQIVEYLVESGCSAVVMACNTSNAVALDRVKSWCPVPVVGIIEPAARAAMAATRNGRIGVIANPITASSGAYERACAPTLQSMYGPSRNVSVYPVGCPKLVPLIEQGLVHSP 166
            +GVFDSGVGGLTIA  ++ + P   I Y+GDTAHVPYG +  +E+    + IV YLVE G  A+V ACNT++AVAL+ ++S   VP++G+IEP  R A+A TRNGRIGV+A   T +SG + R     LQS+      + VYP  CP+LVPL+E G+V  P
Sbjct:    7 VGVFDSGVGGLTIAREIVRQLPAETILYYGDTAHVPYGSKRVDELIRYADAIVAYLVEQGVKAIVDACNTTSAVALNYLQSKYSVPIIGVIEPGVRDALAVTRNGRIGVLATEATIASGLHARL----LQSL---EPRLKVYPQACPRLVPLVEAGIVDGP 160          
BLAST of mRNA_P-wetherbeei_contig16308.1.1 vs. uniprot
Match: D7CIS5_SYNLT (Glutamate racemase n=1 Tax=Syntrophothermus lipocalidus (strain DSM 12680 / TGB-C1) TaxID=643648 RepID=D7CIS5_SYNLT)

HSP 1 Score: 152 bits (384), Expect = 8.090e-43
Identity = 76/160 (47.50%), Postives = 106/160 (66.25%), Query Frame = 0
Query:    6 IGVFDSGVGGLTIAGRLMEEAPHLGIHYFGDTAHVPYGGRPPEEVAMLVEQIVEYLVESGCSAVVMACNTSNAVALDRVKSWCPVPVVGIIEPAARAAMAATRNGRIGVIANPITASSGAYERACAPTLQSMYGPSRNVSVYPVGCPKLVPLIEQGLVHS 165
            +GVFDSGVGGLT+   +++  P   I Y GDTA+VPYGG+PP+E+  L + I+++L+  G  AVV ACNTS++V++  ++  CPVPV+ +I P A  A A TRNGR+GVIA   T  +GAY R        +   S  +SVY V CP+ VPL+EQG++  
Sbjct:    7 VGVFDSGVGGLTVVKEIIKRLPCENIIYIGDTANVPYGGKPPQELIRLGKNIIDFLINQGAKAVVAACNTSSSVSIPILRDMCPVPVIDVIVPGAANAAAVTRNGRVGVIATEATVKTGAYTR-------HIKALSPGISVYEVACPRFVPLVEQGVLEG 159          
BLAST of mRNA_P-wetherbeei_contig16308.1.1 vs. uniprot
Match: A0A829ZQV6_9THEO (Glutamate racemase n=1 Tax=Thermanaeromonas sp. C210 TaxID=2731925 RepID=A0A829ZQV6_9THEO)

HSP 1 Score: 152 bits (383), Expect = 1.030e-42
Identity = 80/161 (49.69%), Postives = 107/161 (66.46%), Query Frame = 0
Query:    6 IGVFDSGVGGLTIAGRLMEEAPHLGIHYFGDTAHVPYGGRPPEEVAMLVEQIVEYLVESGCSAVVMACNTSNAVALDRVKSWCPVPVVGIIEPAARAAMAATRNGRIGVIANPITASSGAYERACAPTLQSMYGPSRNVSVYPVGCPKLVPLIEQGLVHSP 166
            +GVFDSGVGGLT+   ++ + P   I Y+GDTAHVPYG +  EE+    + IV YLVE G  A+V ACNT++A+ALD +K+   VP++G+IEP  R A+A TR+GRIGV+A   T +SG + R     LQS+      + VYP  CP+LVPL+E G V  P
Sbjct:    7 VGVFDSGVGGLTVVREIVRQLPAETIIYYGDTAHVPYGSKKVEELIAYADAIVSYLVEQGVKAIVDACNTTSAIALDYLKNKYSVPIIGVIEPGVREALAVTRSGRIGVLATEATIASGIHARL----LQSL---EPRLKVYPQACPRLVPLVEAGRVEGP 160          
BLAST of mRNA_P-wetherbeei_contig16308.1.1 vs. uniprot
Match: A0A7V6ZV27_9FIRM (Glutamate racemase n=1 Tax=Clostridia bacterium TaxID=2044939 RepID=A0A7V6ZV27_9FIRM)

HSP 1 Score: 149 bits (377), Expect = 8.410e-42
Identity = 77/162 (47.53%), Postives = 104/162 (64.20%), Query Frame = 0
Query:    6 IGVFDSGVGGLTIAGRLMEEAPHLGIHYFGDTAHVPYGGRPPEEVAMLVEQIVEYLVESGCSAVVMACNTSNAVALDRVKSWCPVPVVGIIEPAARAAMAATRNGRIGVIANPITASSGAYERACAPTLQSMYGPSR-NVSVYPVGCPKLVPLIEQGLVHSP 166
            +GVFDSGVGGLT+   ++ + PH  + YFGDTAHVPYG R PEE+     +I EYLV  GC  +++ACNTS ++A + +K   PVP++G+IEPA   A++ T+N  IGV+A   T +S +Y        Q+M    R  V VYP  CP  VPLIE+G+V  P
Sbjct:    9 LGVFDSGVGGLTVVKEILRQLPHESVFYFGDTAHVPYGSRSPEELQGFAFKITEYLVAQGCKMIIIACNTSTSLAYELLKEKFPVPMIGVIEPAVDKALSMTQNNCIGVLATEATINSQSY--------QTMLRSKRPRVEVYPQACPAFVPLIEKGIVDGP 162          
BLAST of mRNA_P-wetherbeei_contig16308.1.1 vs. uniprot
Match: A0A3A6MR21_9FIRM (Glutamate racemase n=1 Tax=Candidatus Desulforudis sp. TaxID=2093368 RepID=A0A3A6MR21_9FIRM)

HSP 1 Score: 147 bits (371), Expect = 6.690e-41
Identity = 77/161 (47.83%), Postives = 111/161 (68.94%), Query Frame = 0
Query:    6 IGVFDSGVGGLTIAGRLMEEAPHLGIHYFGDTAHVPYGGRPPEEVAMLVEQIVEYLVESGCSAVVMACNTSNAVALDRVKSWCPVPVVGIIEPAARAAMAATRNGRIGVIANPITASSGAYERACAPTLQSMYGPSRNVSVYPVGCPKLVPLIEQGLVHSP 166
            +G+FDSGVGGLT+AGR+ E+ P L I YFGDTAHVPYG R PEE+    + I+ +L   G   ++ ACNTS++++L+ +++   +P++G+I P A+AA+ ATR+GR+G+IA   T  SGAYERA    ++S+   S    VY V  P+LVPL+E G +  P
Sbjct:    6 VGLFDSGVGGLTVAGRVFEKLPGLPILYFGDTAHVPYGNRSPEELVRYADGIISFLTGQGARYIIFACNTSSSLSLEIMRTRHALPMMGLIVPGAKAAVDATRSGRVGIIATQGTVKSGAYERA----IRSL---SPGTVVYSVPAPRLVPLVEAGQMDGP 159          
BLAST of mRNA_P-wetherbeei_contig16308.1.1 vs. uniprot
Match: UPI00168475C0 (glutamate racemase n=2 Tax=unclassified Microcoleus TaxID=2642155 RepID=UPI00168475C0)

HSP 1 Score: 147 bits (372), Expect = 8.490e-41
Identity = 82/162 (50.62%), Postives = 108/162 (66.67%), Query Frame = 0
Query:    5 RIGVFDSGVGGLTIAGRLMEEAPHLGIHYFGDTAHVPYGGRPPEEVAMLVEQIVEYLVESGCSAVVMACNTSNAVALDRVKSWCPVPVVGIIEPAARAAMAATRNGRIGVIANPITASSGAYERACAPTLQSMYGPSRNVSVYPVGCPKLVPLIEQGLVHSP 166
            RIG+FDSGVGGLT+   L  + PH  I YFGDTA +PYG R   E+   V +I+ ++V+ G   V+MACNTS+A+AL+ V+S  P+P++G+I P ARAA+   R  RIGVIA P TA+S AY RA    +  M   +R   V+ VGCP+ VPLIEQG +  P
Sbjct:   23 RIGIFDSGVGGLTVLRELYRQLPHESILYFGDTARLPYGTRSQAEILQFVREILTWMVQQGVKMVIMACNTSSALALEAVRSEFPLPILGVILPGARAAVQQGR--RIGVIATPATAASNAYRRA----ILEMDAEAR---VWQVGCPEFVPLIEQGRIDEP 175          
BLAST of mRNA_P-wetherbeei_contig16308.1.1 vs. uniprot
Match: A0A2T0AWA6_9THEO (Glutamate racemase n=1 Tax=Moorella humiferrea TaxID=676965 RepID=A0A2T0AWA6_9THEO)

HSP 1 Score: 146 bits (369), Expect = 1.330e-40
Identity = 79/161 (49.07%), Postives = 104/161 (64.60%), Query Frame = 0
Query:    6 IGVFDSGVGGLTIAGRLMEEAPHLGIHYFGDTAHVPYGGRPPEEVAMLVEQIVEYLVESGCSAVVMACNTSNAVALDRVKSWCPVPVVGIIEPAARAAMAATRNGRIGVIANPITASSGAYERACAPTLQSMYGPSRNVSVYPVGCPKLVPLIEQGLVHSP 166
            +GVFDSGVGGLT+A  +  + P   I Y+GDTAHVPYG R  EE+    + I  +LVE G  A+V ACNT++AVAL  +K    VP++G+IEP  + A+ ATRNGRIGVIA   T +S A+E+A       +   + +V V+   CPKLVPL+E G V  P
Sbjct:    7 VGVFDSGVGGLTVALEISRQLPAETIVYYGDTAHVPYGSRTVEELIFFADTITRFLVEQGAKAIVDACNTTSAVALPYLKQKYDVPIIGVIEPGVKEALKATRNGRIGVIATEATIASRAHEKA-------VQAHAADVQVFGRACPKLVPLVEAGKVSGP 160          
BLAST of mRNA_P-wetherbeei_contig16308.1.1 vs. uniprot
Match: UPI0019B2FB79 (Glutamate racemase n=1 Tax=Gemmatimonadaceae bacterium TaxID=2026741 RepID=UPI0019B2FB79)

HSP 1 Score: 146 bits (368), Expect = 1.740e-40
Identity = 77/161 (47.83%), Postives = 102/161 (63.35%), Query Frame = 0
Query:    6 IGVFDSGVGGLTIAGRLMEEAPHLGIHYFGDTAHVPYGGRPPEEVAMLVEQIVEYLVESGCSAVVMACNTSNAVALDRVKSWCPVPVVGIIEPAARAAMAATRNGRIGVIANPITASSGAYERACAPTLQSMYGPSRNVSVYPVGCPKLVPLIEQGLVHSP 166
            IGVFDSG+GGLT+   +M   PH  + Y GDTA VPYG + PE V     QI  +L+E    A+V+ACNT+ A AL+ ++  CPVPV+G+++P ARAA+ ATRN RIGVI    T +SGAY RA A         + + +V+   CP  VPL+E+G V  P
Sbjct:    6 IGVFDSGIGGLTVVAAIMHALPHERVVYVGDTARVPYGPKSPETVVRYSRQIATWLLEQQVKAIVIACNTATAHALELLQRECPVPVIGVVQPGARAAVRATRNARIGVIGTSGTINSGAYHRAIASL-------APDATVFGAACPLFVPLVEEGWVDHP 159          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16308.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7X8Y0D1_9BURK1.320e-5860.84Glutamate racemase n=1 Tax=Burkholderiales bacteri... [more]
A0A355TRC3_9BACT3.260e-5456.97Glutamate racemase n=1 Tax=bacterium UBP9_UBA11836... [more]
A0A101EC24_9THEO5.150e-4350.93Glutamate racemase n=2 Tax=Clostridia TaxID=186801... [more]
D7CIS5_SYNLT8.090e-4347.50Glutamate racemase n=1 Tax=Syntrophothermus lipoca... [more]
A0A829ZQV6_9THEO1.030e-4249.69Glutamate racemase n=1 Tax=Thermanaeromonas sp. C2... [more]
A0A7V6ZV27_9FIRM8.410e-4247.53Glutamate racemase n=1 Tax=Clostridia bacterium Ta... [more]
A0A3A6MR21_9FIRM6.690e-4147.83Glutamate racemase n=1 Tax=Candidatus Desulforudis... [more]
UPI00168475C08.490e-4150.62glutamate racemase n=2 Tax=unclassified Microcoleu... [more]
A0A2T0AWA6_9THEO1.330e-4049.07Glutamate racemase n=1 Tax=Moorella humiferrea Tax... [more]
UPI0019B2FB791.740e-4047.83Glutamate racemase n=1 Tax=Gemmatimonadaceae bacte... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015942Asp/Glu/hydantoin racemasePFAMPF01177Asp_Glu_racecoord: 33..131
e-value: 2.1E-14
score: 53.9
NoneNo IPR availableGENE3D3.40.50.1860coord: 5..138
e-value: 1.2E-39
score: 137.2
NoneNo IPR availablePANTHERPTHR21198GLUTAMATE RACEMASEcoord: 5..164
IPR004391Glutamate racemasePANTHERPTHR21198:SF2GLUTAMATE RACEMASEcoord: 5..164
IPR001920Asp/Glu racemaseSUPERFAMILY53681Aspartate/glutamate racemasecoord: 5..107
IPR001920Asp/Glu racemaseSUPERFAMILY53681Aspartate/glutamate racemasecoord: 109..165

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig16308contigP-wetherbeei_contig16308:2..499 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig16308.1.1mRNA_P-wetherbeei_contig16308.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig16308 2..520 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig16308.1.1 ID=prot_P-wetherbeei_contig16308.1.1|Name=mRNA_P-wetherbeei_contig16308.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=166bp
MALGRIGVFDSGVGGLTIAGRLMEEAPHLGIHYFGDTAHVPYGGRPPEEV
AMLVEQIVEYLVESGCSAVVMACNTSNAVALDRVKSWCPVPVVGIIEPAA
RAAMAATRNGRIGVIANPITASSGAYERACAPTLQSMYGPSRNVSVYPVG
CPKLVPLIEQGLVHSP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015942Asp/Glu/hydantoin_racemase
IPR004391Glu_race
IPR001920Asp/Glu_race