mRNA_P-wetherbeei_contig16292.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig16292.1.1 vs. uniprot
Match: A0A8J6C3I5_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6C3I5_DIALT) HSP 1 Score: 71.6 bits (174), Expect = 4.540e-10 Identity = 97/312 (31.09%), Postives = 130/312 (41.67%), Query Frame = 1
Query: 1 CYGPATGGWKLYSSIRLTARAL----LSLSVAGNDGGQATVAVIGLPKVLAAVGGGLGAGDEARWVSGYASSDAECDAATVSATAPSAVAVQAAANVTTAIKSATLSVTFVFSSFTAPPSDLALCWRHGAEPFRLYPAVIMRVWTLTGASQPVAKLRTKMIAVAGADARVSFEGVGISAGDRAKWVVAVTPPTAAAGLITLTQEDCATAPAALGSAVTTVADSRGSAVFRFTAATATAGTAMALCYGFGGERFQAY-PSITMRSIAPALTAVDA-SYVIVGRPHQLRLTGTFGFTAPDFVKLVPNAAECTAS 918
CY A ++LY+++ L L + G A AV G+ L G GL D A+WV DAA +A A A+ + +A +++ F A L LC+R EPF LY A + + S PV + IA+AG RV+F GVG+ AGDRA+WV A AAG CA + AA V G A+F F AT MALCY FG E + P +R+ A +T+ S +VG L L G G A D A+C +
Sbjct: 240 CYAFAGEPYRLYANLTLDVLGLGEPPIGAPALDGAGDVALRAVAGVAARLQLNGVGLSVADSAKWV--------RADAANCAAAADVALGGEQRP------LAADMAMLFAMQ---AGARGLRLCYRLRTEPFALYSAWVADALAV---SSPV-----RTIALAGFAQRVTFAGVGVRAGDRARWVRA-----GAAG--------CAESAAAEA-----VVSEGGVAIFTF----ATPALGMALCYRFGNESDAPFAPFGAVRADALGVTSPSRPSAAVVGAAEVLALDGV-GLEASDLAFWAARGADCATA 503
BLAST of mRNA_P-wetherbeei_contig16292.1.1 vs. uniprot
Match: A0A8J5X7I0_DIALT (EGF-like domain-containing protein n=4 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5X7I0_DIALT) HSP 1 Score: 70.1 bits (170), Expect = 1.440e-9 Identity = 95/302 (31.46%), Postives = 133/302 (44.04%), Query Frame = 1
Query: 31 LYSSIRLTARALLSLSVAGNDGGQATVAVIGLPKVLAAVGGGLGAGDEARWVSGYASSDAEC-DAATVSATAPSAVAVQAAANVTTAIKSATLSVTFVFSSFTAPPSDLALCWRHGAE-----PFRLYPAVIMRVWTLTGASQPVAKLRTKMIAVAGADARVSFEGVGISAGDRAKWVVAVTPPTAAAGLITLTQEDCATAP--AALGSAVTTVADSRGSAVFRFTAATATAGTAMALCYGFGGERFQAYPSITMRSIAPALTAVDASYVIVGRPHQLRLTGTFGFTAPDFVKLVPNAAECT 912
L+S R + +L ++ + G A A++G P LA G G+ AGD A +V ++A C V AT SA A A A L TF F AP + L LC+ GA PF + + + V + G VA + GA V+ GVG++AGD AKWV + DCA+A A G ++ A G+ F FT +T G A+ LCY F GE + + +T+ + A A A D V+ G ++L G +G A D V P A CT
Sbjct: 179 LFSEARAS---VLDVTALADADGNAR-ALVGAPTELAFAGTGVRAGDSAYFVP----ANATCVKPGAVLATYGSAYGGGARA------LDARLRATFTFG---APAAGLQLCFGFGAIDDGSLPFAPFAELAVDVVGVVGPPLTVAAV--------GAAEAVALRGVGLAAGDAAKWVAP-------------SSTDCASAAPVGAFGGELSATAG--GALAFTFTTSTEATGAAV-LCYRFAGEVWARFGGVTVEAFALAPRAFD---VVAGVAEDMQLAG-YGLRAGDEVYFAPAADACT 435
BLAST of mRNA_P-wetherbeei_contig16292.1.1 vs. uniprot
Match: D7G5B0_ECTSI (Laminin IV type A domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5B0_ECTSI) HSP 1 Score: 60.8 bits (146), Expect = 1.560e-6 Identity = 74/268 (27.61%), Postives = 112/268 (41.79%), Query Frame = 1
Query: 97 GQATVAVIGLPKVLAAVGGGLGAGDEARWVSGYASSDAECD-------AATVSATAPSAVAVQAAANVTTAIKSATLSVTFVFSSFTAPPSDLALCWRHGAEPFRLYPAVIMRVWTLTGASQPVAKLRTKMIAVAGADARVSFEGVGISAGDRAKWVVAVTPPTAAAGLITLTQEDCATAPAALGSAVTTVADSRGSAVFRFT------AATATAGTAMALCYGFGGERFQAYPSITMRSI-APALTAV--DASYVIVGRPHQLRLTG 852
G ++VAV K G G+ D+ +WV+ A+SD +C+ + +A SA+ VTF SS T P L + +G+ PF+LYPA+ + V+ L A+ + ++V G ++ G G + D AKW++ T ++A + L A G S A F FT AA LCY FG E FQ YPSI+M + +T+ +S +V P L +G
Sbjct: 1492 GSSSVAVAAQNKRWTFFGHGVALEDKVKWVNSSATSDEDCNWNAEEINIDVFNGSASSAI------------------VTFSESSETTGPLQLCYQFSNGSHPFKLYPAINIDVFELYSVQD--AEQGSISLSVVGYAKVLTLSGFGNAEFDEAKWLLGSTNCSSARDVAPL-------ASGGDGEVNAASVSSTFQASFEFTEDVFTQAAAGNTSAGATLCYRFGSEEFQHYPSISMGILYLNGITSAVGSSSLAVVDVPEILSFSG 1732
BLAST of mRNA_P-wetherbeei_contig16292.1.1 vs. uniprot
Match: A0A6H5L6Q6_9PHAE (Calx-beta domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6Q6_9PHAE) HSP 1 Score: 60.5 bits (145), Expect = 2.060e-6 Identity = 73/268 (27.24%), Postives = 113/268 (42.16%), Query Frame = 1
Query: 97 GQATVAVIGLPKVLAAVGGGLGAGDEARWVSGYASSDAECD-------AATVSATAPSAVAVQAAANVTTAIKSATLSVTFVFSSFTAPPSDLALCWRHGAEPFRLYPAVIMRVWTLTGASQPVAKLRTKMIAVAGADARVSFEGVGISAGDRAKWVVAVTPPTAAAGLITLTQEDCATAPAALGSAVTTVADSRGSAVFRFT------AATATAGTAMALCYGFGGERFQAYPSITM--RSIAPALTAV-DASYVIVGRPHQLRLTG 852
G ++VAV K G G+ D+ +WV+ A+SD +C+ + +A SA+ +TF SS T P L + +G+ PF+LYPA+ + V+ L A+ + ++V G ++ G G + D AKW++ + ++A ++ A G S A F FT AA A LCY FG E FQ YPSI+M + +AV +S +V P L +G
Sbjct: 1337 GSSSVAVAAQNKRWTFFGHGMALEDKVKWVNSSATSDEDCNWNAEEINIDVFNGSASSAI------------------ITFSESSETTGPLQLCYQFSNGSHPFKLYPAINIDVFELYNVQN--AEQGSTSLSVVGYAKVLTLSGFGNAEFDEAKWLLEGSTNCSSA------RDVAPLASGGNGGENAASVSSSFKASFEFTEDVFTQAAAGNASAGTTLCYRFGSEEFQHYPSISMGIHYVNGITSAVGSSSLAVVDVPEILTFSG 1578 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16292.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 4
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig16292.1.1 >prot_P-wetherbeei_contig16292.1.1 ID=prot_P-wetherbeei_contig16292.1.1|Name=mRNA_P-wetherbeei_contig16292.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=308bp CYGPATGGWKLYSSIRLTARALLSLSVAGNDGGQATVAVIGLPKVLAAVGback to top mRNA from alignment at P-wetherbeei_contig16292:56..979+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig16292.1.1 ID=mRNA_P-wetherbeei_contig16292.1.1|Name=mRNA_P-wetherbeei_contig16292.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=924bp|location=Sequence derived from alignment at P-wetherbeei_contig16292:56..979+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig16292:56..979+ >mRNA_P-wetherbeei_contig16292.1.1 ID=mRNA_P-wetherbeei_contig16292.1.1|Name=mRNA_P-wetherbeei_contig16292.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=924bp|location=Sequence derived from alignment at P-wetherbeei_contig16292:56..979+ (Phaeothamnion wetherbeei SAG_119_79)back to top |