mRNA_P-wetherbeei_contig16275.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig16275.1.1
Unique NamemRNA_P-wetherbeei_contig16275.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig16275.1.1 vs. uniprot
Match: A0A140GVR5_9HYPH (ATP-dependent DNA Helicase n=1 Tax=Rhodoplanes sp. Z2-YC6860 TaxID=674703 RepID=A0A140GVR5_9HYPH)

HSP 1 Score: 369 bits (947), Expect = 3.050e-114
Identity = 257/540 (47.59%), Postives = 289/540 (53.52%), Query Frame = 1
Query:    1 WLKSHIERLLGPLFALAAAEDITGIARGVAFQLIEAIGVLERQKVAEEVKGLDQPSRATLRKYGIRFGAYHLYLPGLLKPAPRSLAAQLWMLKHESPEAKGLDDLQRLAGSGRTSIPIDAETPKALYRTVGYRICGERAIRVDILERLADLVRPALAWREGATGSKPAGAFDGRGFTVTGAMTSLTGASGEDFASILRSLGYRMEKRPKTLETP-----------------------------------KPAEAVAAETPAAEAT------------------------TEAAPVEPE-----------------------------------------TVSEAVATTEXXXXXXXAAATPAEPEMVEVWRPGRPGGNQXXXXXXXXXXXXXXXXXXXATPGAE------------------------GERKERHGRSRHRRHGG----GERK----EXXXXXADNRPKRPEGDRKGPRPEXXXXXXXXXXXXXXXXXXXXXGPDRIWGSSEAPRSGKEPDPNSPFAKLLALKAQLETNK 1224
            WLK+HIERLLGPLFALAAAEDITGIARGVA+QLIEA+GVLERQKVAEEVKGLDQ +RA LRKYG+RFGAYHLYLP LLKPAPRSLAAQLW+LK+ +P+ KGL +LQRLA SGRTSIP+D +TPK LYRT+GYR+CGERAIRVDILERLADL+RPA++WREG++ ++P GAF+G GFTVTGAMTSLTGASGEDFASILRSLGYRME+RPK  E                                     +  E   AE    EA                          EA P   E                                         T +EA            A A PAEPEM+EVWRPGRP G +                       A+                        GE    H + R + HG     GER+    E      DNR  RPE      R +      XXXXXX          P R W SSE  R GKEPDPNSPFAKLLALK QLE NK
Sbjct:  615 WLKTHIERLLGPLFALAAAEDITGIARGVAYQLIEALGVLERQKVAEEVKGLDQAARALLRKYGVRFGAYHLYLPALLKPAPRSLAAQLWLLKNGTPDDKGLAELQRLASSGRTSIPVDKDTPKPLYRTIGYRVCGERAIRVDILERLADLIRPAMSWREGSSATRPPGAFNGYGFTVTGAMTSLTGASGEDFASILRSLGYRMERRPKPPEAEXXXXXXXXXXXXXXXXXXXXXXXXXAVHDDVMADGEMPEVEHAEHSXXEAXXXXXXXXXXXXXXXXXXXXXXEKHVEAEPAAAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPAEAA-----------APAAPAEPEMIEVWRPGRPLGERRPRDNEGRNRRPRHRGHKPGQAAAQPAGDGAAAAAAPDQAAASTDATPAGENGREHHQGRRKFHGRDXXQGERRDGQAERHGKRDDNRKGRPE------RRDREDGGGXXXXXXRDRRDRDDNRPSRTWSSSEQKRGGKEPDPNSPFAKLLALKEQLEGNK 1137          
BLAST of mRNA_P-wetherbeei_contig16275.1.1 vs. uniprot
Match: A0A371B891_9HYPH (Helicase n=2 Tax=unclassified Pseudolabrys TaxID=2638514 RepID=A0A371B891_9HYPH)

HSP 1 Score: 358 bits (920), Expect = 1.190e-110
Identity = 205/339 (60.47%), Postives = 235/339 (69.32%), Query Frame = 1
Query:    1 WLKSHIERLLGPLFALAAAEDITGIARGVAFQLIEAIGVLERQKVAEEVKGLDQPSRATLRKYGIRFGAYHLYLPGLLKPAPRSLAAQLWMLKHESPEAKGLDDLQRLAGSGRTSIPIDAETPKALYRTVGYRICGERAIRVDILERLADLVRPALAWREGATGSKPAGAFDGRGFTVTGAMTSLTGASGEDFASILRSLGYRMEKRPKTLETPKPAEA---------------------------VAAETPAAEATT-------EAAPVEPETVS------------EAVATTEXXXXXXX--------------AAATPAEPEMVEVWRPGRPGGNQ 837
            W+++HIE+LL PLF+L+AAED+TG+ARG+AFQL+EA+GVLERQKVAEEVKGLDQPSRATLRKYG+RFGAYH+YLP LLKPAPRSLA QLW LKHE+P+AKG+ +L  LA SGRTSIP+D +TPKALYRT GYRICGERA+RVDILERLADL+RPALAWREG T  KP GAFDGRGF +TGAMTSLTGASGEDFASILRSLGYRM+++PK  E  KPAEA                           V+   PAAE ++       E  P +PE VS            EA    E                     AA T AEPE VEVWRPG  GG +
Sbjct:  615 WIRNHIEKLLAPLFSLSAAEDVTGVARGIAFQLVEALGVLERQKVAEEVKGLDQPSRATLRKYGVRFGAYHIYLPLLLKPAPRSLATQLWALKHEAPDAKGVTELLHLAASGRTSIPLDKDTPKALYRTSGYRICGERAVRVDILERLADLIRPALAWREGMT-PKPDGAFDGRGFVITGAMTSLTGASGEDFASILRSLGYRMDRKPKPPEA-KPAEAASDAVTIAPEGASEAPAEPXXXXXXXXVSEIAPAAEVSSLSLLPEAELLPPQPEPVSXXXXXXXXXXGVEATTIVEAAEAAPPVAGDGLTAPEGDAPAAETKAEPETVEVWRPGGHGGGE 951          
BLAST of mRNA_P-wetherbeei_contig16275.1.1 vs. uniprot
Match: A0A345ZYK7_9HYPH (Helicase n=1 Tax=Pseudolabrys taiwanensis TaxID=331696 RepID=A0A345ZYK7_9HYPH)

HSP 1 Score: 355 bits (911), Expect = 2.150e-109
Identity = 188/247 (76.11%), Postives = 211/247 (85.43%), Query Frame = 1
Query:    1 WLKSHIERLLGPLFALAAAEDITGIARGVAFQLIEAIGVLERQKVAEEVKGLDQPSRATLRKYGIRFGAYHLYLPGLLKPAPRSLAAQLWMLKHESPEAKGLDDLQRLAGSGRTSIPIDAETPKALYRTVGYRICGERAIRVDILERLADLVRPALAWREGATGSKPAGAFDGRGFTVTGAMTSLTGASGEDFASILRSLGYRMEKRPKTLETPKPAEAVAAETPAA--EATTEAAPVEPETVSEAV 735
            WLKS IE+LL PLF L+AAEDITG+ARGVAFQ++EA+GVLERQKVAEEVKGLDQPSRATLRKYG+RFGAYH+YLP LLKPAPR+LA QLW LKHE+P+AKG+ +L  LA SGRTSIP+D ET KALYRTVGYR+ GERA+RVDILERLADL+RPAL+WREGA G KP GA DGR FTVTGAMTSLTGASGEDFA+ILRSLGYRME+RPK  E P+   A A   P A  EATTEA PVE    +EA+
Sbjct:  616 WLKSQIEKLLAPLFTLSAAEDITGMARGVAFQVVEALGVLERQKVAEEVKGLDQPSRATLRKYGVRFGAYHIYLPALLKPAPRALATQLWALKHEAPDAKGVAELLHLAASGRTSIPVDKETSKALYRTVGYRVTGERAVRVDILERLADLIRPALSWREGAPGPKPDGAVDGRSFTVTGAMTSLTGASGEDFATILRSLGYRMERRPKPPE-PEVTPAAAGMAPVAPEEATTEA-PVETTAQTEAL 860          
BLAST of mRNA_P-wetherbeei_contig16275.1.1 vs. uniprot
Match: A0A537Q791_9PROT (Helicase n=2 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537Q791_9PROT)

HSP 1 Score: 341 bits (875), Expect = 1.560e-104
Identity = 218/455 (47.91%), Postives = 258/455 (56.70%), Query Frame = 1
Query:    1 WLKSHIERLLGPLFALAAAEDITGIARGVAFQLIEAIGVLERQKVAEEVKGLDQPSRATLRKYGIRFGAYHLYLPGLLKPAPRSLAAQLWMLKHESPEAKGLDDLQRLAGSGRTSIPIDAETPKALYRTVGYRICGERAIRVDILERLADLVRPALAWREGATGSKPAGAFDGRGFTVTGAMTSLTGASGEDFASILRSLGYRMEKRPKTLET----PKPAEAVAAE----TPAAEATTEAAPVEPETVSE------------------AVATTEXXXXXXXAAATPAEP---------------EMVEVWRPGRPGGNQXXXXXXXXXXXXXXXXXXXATPGAEG--ERKERHGRSRHRRHGGGERKEXXXXXADNRPKRPEGDRKGPRPEXXXXXXXXXXXXXXXXXXXXXGPDRIWGSSEAPRSGKEPDPNSPFAKLLALKAQLET-NKERP 1233
            WLK H+E+LLGPLF LA AED+TGIARGVAFQL+E++GVLER K+A+EVK LDQ +RATLRKYG+RFGAYHLY+P LLKPAPR LAAQLW +KH  PE KG D    LA +GRTS+P+D E PK+LYR VGYR+CGERA+RVDILERLADL+RP LAWR G  G+KP GA DG GF VTG+MTSLTG SGEDFASILRSLGYRME+RPK  E+    P+P+     E    TPAA A+   +P  P+                         T+E         A PA P               E++EVWRPGRP   +                    +  A G  ER +    +   + GGG            +P+ P G    PR E                                 R  + PDPNSPFAKL ALKAQLE  +KERP
Sbjct:  615 WLKVHVEKLLGPLFGLAGAEDVTGIARGVAFQLVESLGVLERHKIADEVKTLDQAARATLRKYGVRFGAYHLYVPALLKPAPRVLAAQLWAIKHADPELKGADTFPGLAANGRTSVPVDKELPKSLYRVVGYRVCGERAVRVDILERLADLIRPLLAWRPGNPGAKPPGAVDGSGFVVTGSMTSLTGTSGEDFASILRSLGYRMEQRPKPPESVPNAPQPSXXXXXEPATGTPAAAASISGSPELPDPAEPQPSVLAAPDDAPQRDADAGARTSEAPVLEAPNLAEPAVPAVAAARPDGSPFGTEEIIEVWRPGRPEHRRGDRARPRGPRRRERTGERRDSVTAAGPAERSQPQTPALAEKAGGGTPGPRQRRPEREKPRSPSGQ---PRSEAKE------------------------------RRERAPDPNSPFAKLAALKAQLEAASKERP 1036          
BLAST of mRNA_P-wetherbeei_contig16275.1.1 vs. uniprot
Match: A0A0Q7TAK5_9HYPH (Helicase n=1 Tax=Pseudolabrys sp. Root1462 TaxID=1736466 RepID=A0A0Q7TAK5_9HYPH)

HSP 1 Score: 340 bits (873), Expect = 7.700e-104
Identity = 164/212 (77.36%), Postives = 191/212 (90.09%), Query Frame = 1
Query:    1 WLKSHIERLLGPLFALAAAEDITGIARGVAFQLIEAIGVLERQKVAEEVKGLDQPSRATLRKYGIRFGAYHLYLPGLLKPAPRSLAAQLWMLKHESPEAKGLDDLQRLAGSGRTSIPIDAETPKALYRTVGYRICGERAIRVDILERLADLVRPALAWREGATGSKPAGAFDGRGFTVTGAMTSLTGASGEDFASILRSLGYRMEKRPKTLE 636
            WLK+HIE+LL PLF+L+AAED+TGI RG+AFQ++E++GVLERQKVAEEVKGLDQPSRATLRKYG+RFGAYH+YLP LLKPAPR+LA QL  LKHE P+A G+ +L  LA SGRTSIP+D +TPKALYR  GYRICGERA+RVDILERLADL+RPAL+WREG +  KP GAFDGR FT+TGAMTSLTGASGEDFASILRSLGYRM+++PK +E
Sbjct:  615 WLKNHIEKLLAPLFSLSAAEDVTGIGRGIAFQVVESLGVLERQKVAEEVKGLDQPSRATLRKYGVRFGAYHIYLPALLKPAPRALATQLHALKHEGPDAHGVTELLHLAASGRTSIPVDKDTPKALYRMSGYRICGERAVRVDILERLADLIRPALSWREGVS-PKPDGAFDGRSFTITGAMTSLTGASGEDFASILRSLGYRMDRKPKPVE 825          
BLAST of mRNA_P-wetherbeei_contig16275.1.1 vs. uniprot
Match: A0A363TWA4_9BRAD (Helicase (Fragment) n=1 Tax=Bradyrhizobiaceae bacterium TaxID=2072420 RepID=A0A363TWA4_9BRAD)

HSP 1 Score: 331 bits (848), Expect = 1.100e-101
Identity = 163/226 (72.12%), Postives = 190/226 (84.07%), Query Frame = 1
Query:    1 WLKSHIERLLGPLFALAAAEDITGIARGVAFQLIEAIGVLERQKVAEEVKGLDQPSRATLRKYGIRFGAYHLYLPGLLKPAPRSLAAQLWMLKHESPEAKGLDDLQRLAGSGRTSIPIDAETPKALYRTVGYRICGERAIRVDILERLADLVRPALAWREGATGSKPAGAFDGRGFTVTGAMTSLTGASGEDFASILRSLGYRMEKRPKTLETPKPAEAVAAETPA 678
            WLK+H+E+LLGPLFAL  AED+TGIARGVA+QL+E++GVLER +VAE+VK LDQ +RA+LRKYG+RFGAYH+YLP +LKPA R+LA QLW LK+  PE KGLD++  LA SGRTS P D   PK+LYRTVGYR+CGERA+RVDILERLADL+RPALAWR G+ G KP+GA DG GFTVT AMTSLTG+SGEDFAS+LRSLGYRMEKRPK      PAEA  A  PA
Sbjct:  615 WLKTHVEKLLGPLFALGGAEDVTGIARGVAYQLMESLGVLERHRVAEDVKSLDQTARASLRKYGVRFGAYHIYLPQILKPAARALAVQLWALKNGGPEVKGLDEVPHLAASGRTSFPADKAVPKSLYRTVGYRVCGERAVRVDILERLADLIRPALAWRPGSPGEKPSGAVDGSGFTVTVAMTSLTGSSGEDFASVLRSLGYRMEKRPK------PAEAAQAAAPA 834          
BLAST of mRNA_P-wetherbeei_contig16275.1.1 vs. uniprot
Match: A0A1Q4DBB2_9HYPH (Helicase n=1 Tax=Rhizobiales bacterium 64-17 TaxID=1895814 RepID=A0A1Q4DBB2_9HYPH)

HSP 1 Score: 330 bits (845), Expect = 1.010e-99
Identity = 159/212 (75.00%), Postives = 186/212 (87.74%), Query Frame = 1
Query:    1 WLKSHIERLLGPLFALAAAEDITGIARGVAFQLIEAIGVLERQKVAEEVKGLDQPSRATLRKYGIRFGAYHLYLPGLLKPAPRSLAAQLWMLKHESPEAKGLDDLQRLAGSGRTSIPIDAETPKALYRTVGYRICGERAIRVDILERLADLVRPALAWREGATGSKPAGAFDGRGFTVTGAMTSLTGASGEDFASILRSLGYRMEKRPKTLE 636
            WLK+H+E+LL PLFAL AAEDITG+ARG+AFQL+EA+GVL+RQKVAE+VK LDQPSRATLRKYG+RFGAYH+Y+P LLKPAPRSLA QLW LK+E+P+  G+D LQ +A SGRTSI ID + P ALYRT GYR+CGERA+RVDILERLADL+RPALAWR+  T  KPAG F G GFTVT AMTSLTGA+GEDFASILR+LGYRM+++PK  E
Sbjct:  618 WLKTHVEKLLAPLFALNAAEDITGLARGIAFQLVEALGVLDRQKVAEDVKTLDQPSRATLRKYGVRFGAYHIYVPLLLKPAPRSLATQLWALKNEAPDVTGVDTLQHIAASGRTSIAIDKDIPAALYRTSGYRVCGERAVRVDILERLADLIRPALAWRDSMTTPKPAGVFPGGGFTVTTAMTSLTGAAGEDFASILRALGYRMDRKPKPQE 829          
BLAST of mRNA_P-wetherbeei_contig16275.1.1 vs. uniprot
Match: UPI000DADAC7E (helicase n=1 Tax=Rhodoplanes elegans TaxID=29408 RepID=UPI000DADAC7E)

HSP 1 Score: 328 bits (840), Expect = 1.380e-99
Identity = 157/219 (71.69%), Postives = 185/219 (84.47%), Query Frame = 1
Query:    1 WLKSHIERLLGPLFALAAAEDITGIARGVAFQLIEAIGVLERQKVAEEVKGLDQPSRATLRKYGIRFGAYHLYLPGLLKPAPRSLAAQLWMLKHESPEAKGLDDLQRLAGSGRTSIPIDAETPKALYRTVGYRICGERAIRVDILERLADLVRPALAWREGATGSKPAGAFDGRGFTVTGAMTSLTGASGEDFASILRSLGYRMEKRPKTLETPKPAEA 657
            W ++H+ER+L PLF L AAED+TGIARG+AFQL+EA+GVLER K+AEE+KGLDQ  RATLRK+G+RFGAYH+Y+P LLKPAPR+LAA+LW LKH   +  GLDDLQRLA SGRTS  +D   P+ LYRT+GYR+CGERA+RVDILERLADLVRPALAWR  A G KPAGAFDG GF VT AMTSLTG+SGED ASIL++LGYR+E+RPK  E P  A+A
Sbjct:  615 WTRTHVERILAPLFVLGAAEDVTGIARGIAFQLVEALGVLERFKIAEELKGLDQAQRATLRKHGVRFGAYHVYVPALLKPAPRALAAELWALKHGDVDTTGLDDLQRLAASGRTSFAVDKAVPRTLYRTIGYRVCGERAVRVDILERLADLVRPALAWRPNAPGEKPAGAFDGSGFLVTQAMTSLTGSSGEDLASILKALGYRVERRPKPPEAPAEAKA 833          
BLAST of mRNA_P-wetherbeei_contig16275.1.1 vs. uniprot
Match: A0A327K9W4_9HYPH (Helicase (Fragment) n=2 Tax=Rhodoplanes TaxID=29407 RepID=A0A327K9W4_9HYPH)

HSP 1 Score: 324 bits (830), Expect = 1.650e-99
Identity = 163/234 (69.66%), Postives = 193/234 (82.48%), Query Frame = 1
Query:    1 WLKSHIERLLGPLFALAAAEDITGIARGVAFQLIEAIGVLERQKVAEEVKGLDQPSRATLRKYGIRFGAYHLYLPGLLKPAPRSLAAQLWMLKHESPEAKGLDDLQRLAGSGRTSIPIDAETPKALYRTVGYRICGERAIRVDILERLADLVRPALAWREGATGSKPAGAFDGRGFTVTGAMTSLTGASGEDFASILRSLGYRMEKRPKTLETPKPAEAVAAETPAAEATTEAA 702
            W ++HIER+L PLF L AA+DITGI RG+AFQL+EA+GVLER K+AEE+KGLDQ  RATLRK+G+RFGAYH+Y+P LLKPAPRSLAA+LW LKH   +  GLDDLQRLA SGRTS  +D   P+ LYRT+GYR+CGERA+RVDILERLADL+RPAL+WR  ++G KPAGAFDG GF VT AMTSLTG+SGED ASIL++LGYR+E+RPK    P+PA  VA  T AAE   EAA
Sbjct:  615 WTRTHIERVLAPLFVLGAADDITGIGRGIAFQLVEALGVLERFKIAEELKGLDQAQRATLRKHGVRFGAYHVYVPALLKPAPRSLAAELWALKHGDIDTSGLDDLQRLAASGRTSFAVDKAVPRTLYRTIGYRVCGERAVRVDILERLADLIRPALSWRPESSGEKPAGAFDGSGFVVTQAMTSLTGSSGEDLASILKALGYRVERRPKP-PAPEPAPGVA--TTAAEHAPEAA 845          
BLAST of mRNA_P-wetherbeei_contig16275.1.1 vs. uniprot
Match: A0A537KRH7_9PROT (Helicase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537KRH7_9PROT)

HSP 1 Score: 328 bits (842), Expect = 2.110e-99
Identity = 159/212 (75.00%), Postives = 181/212 (85.38%), Query Frame = 1
Query:    1 WLKSHIERLLGPLFALAAAEDITGIARGVAFQLIEAIGVLERQKVAEEVKGLDQPSRATLRKYGIRFGAYHLYLPGLLKPAPRSLAAQLWMLKHESPEAKGLDDLQRLAGSGRTSIPIDAETPKALYRTVGYRICGERAIRVDILERLADLVRPALAWREGATGSKPAGAFDGRGFTVTGAMTSLTGASGEDFASILRSLGYRMEKRPKTLE 636
            WLK+H+E+LLGPLFAL +AEDITGIARGVAFQL EA+GVLER +V EEVKGL+Q +RATLRKYG+RFGAYHLYLP LLKP PR+LA QLW LK  +P+ KGLDD+  LAGSGRTS P D + PKALYR  GYR+CGERA+RVDILERLADL+RPALAWR G+  +KP GA +G GFTVT  MTSLTG+SGEDFAS+LRSLGYRMEKR K  E
Sbjct:  615 WLKAHLEKLLGPLFALGSAEDITGIARGVAFQLTEALGVLERHRVVEEVKGLEQAARATLRKYGVRFGAYHLYLPNLLKPGPRALAVQLWALKEATPDTKGLDDVPHLAGSGRTSFPADKDVPKALYRVAGYRVCGERAVRVDILERLADLIRPALAWRPGSPAAKPPGAVEGGGFTVTVNMTSLTGSSGEDFASVLRSLGYRMEKRVKPAE 826          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16275.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A140GVR5_9HYPH3.050e-11447.59ATP-dependent DNA Helicase n=1 Tax=Rhodoplanes sp.... [more]
A0A371B891_9HYPH1.190e-11060.47Helicase n=2 Tax=unclassified Pseudolabrys TaxID=2... [more]
A0A345ZYK7_9HYPH2.150e-10976.11Helicase n=1 Tax=Pseudolabrys taiwanensis TaxID=33... [more]
A0A537Q791_9PROT1.560e-10447.91Helicase n=2 Tax=Alphaproteobacteria bacterium Tax... [more]
A0A0Q7TAK5_9HYPH7.700e-10477.36Helicase n=1 Tax=Pseudolabrys sp. Root1462 TaxID=1... [more]
A0A363TWA4_9BRAD1.100e-10172.12Helicase (Fragment) n=1 Tax=Bradyrhizobiaceae bact... [more]
A0A1Q4DBB2_9HYPH1.010e-9975.00Helicase n=1 Tax=Rhizobiales bacterium 64-17 TaxID... [more]
UPI000DADAC7E1.380e-9971.69helicase n=1 Tax=Rhodoplanes elegans TaxID=29408 R... [more]
A0A327K9W4_9HYPH1.650e-9969.66Helicase (Fragment) n=2 Tax=Rhodoplanes TaxID=2940... [more]
A0A537KRH7_9PROT2.110e-9975.00Helicase n=1 Tax=Alphaproteobacteria bacterium Tax... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig16275contigP-wetherbeei_contig16275:68..1528 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog78245.Xaut_2639
Preferred namemgpS
PFAMsHelicase_C
Model size1236
Max annot lvl28211|Alphaproteobacteria
KEGG koko:K17675
Hectar predicted targeting categorysignal peptide
Exons3
Evalue4.28e-98
EggNOG OGsCOG4581@1|root,COG4581@2|Bacteria,1MVD6@1224|Proteobacteria,2TR7N@28211|Alphaproteobacteria,3EXV1@335928|Xanthobacteraceae
EC3.6.4.13
Descriptionhelicase superfamily c-terminal domain
Cds size1236
COG categoryL
BRITEko00000,ko01000,ko03029
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186081.6314013-CDS-P-wetherbeei_contig16275:67..7781683186081.6314013-CDS-P-wetherbeei_contig16275:67..778Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig16275 68..778 +
1683186081.642887-CDS-P-wetherbeei_contig16275:928..10971683186081.642887-CDS-P-wetherbeei_contig16275:928..1097Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig16275 929..1097 +
1683186081.6516428-CDS-P-wetherbeei_contig16275:1172..15281683186081.6516428-CDS-P-wetherbeei_contig16275:1172..1528Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig16275 1173..1528 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig16275.1.1prot_P-wetherbeei_contig16275.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig16275 68..1528 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig16275.1.1

>prot_P-wetherbeei_contig16275.1.1 ID=prot_P-wetherbeei_contig16275.1.1|Name=mRNA_P-wetherbeei_contig16275.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=412bp
WLKSHIERLLGPLFALAAAEDITGIARGVAFQLIEAIGVLERQKVAEEVK
GLDQPSRATLRKYGIRFGAYHLYLPGLLKPAPRSLAAQLWMLKHESPEAK
GLDDLQRLAGSGRTSIPIDAETPKALYRTVGYRICGERAIRVDILERLAD
LVRPALAWREGATGSKPAGAFDGRGFTVTGAMTSLTGASGEDFASILRSL
GYRMEKRPKTLETPKPAEAVAAETPAAEATTEAAPVEPETVSEAVATTEA
TADAAPAAATPAEPEMVEVWRPGRPGGNQRRREDEKQGGRHRRRVAAAAT
PGAEGERKERHGRSRHRRHGGGERKEGGEQRADNRPKRPEGDRKGPRPER
GDRPDRGPRRDRDRDRGRDKGPDRIWGSSEAPRSGKEPDPNSPFAKLLAL
KAQLETNKERP*
back to top

mRNA from alignment at P-wetherbeei_contig16275:68..1528+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig16275.1.1 ID=mRNA_P-wetherbeei_contig16275.1.1|Name=mRNA_P-wetherbeei_contig16275.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1461bp|location=Sequence derived from alignment at P-wetherbeei_contig16275:68..1528+ (Phaeothamnion wetherbeei SAG_119_79)
TGGCTCAAGTCTCACATCGAGCGATTGCTGGGCCCGCTGTTCGCGCTGGC TGCGGCCGAGGATATCACCGGCATCGCGCGCGGCGTTGCGTTTCAACTGA TCGAAGCGATCGGCGTTCTCGAACGCCAGAAGGTCGCCGAGGAGGTGAAG GGCCTCGATCAGCCGTCGCGCGCCACGCTGCGCAAGTACGGAATCCGCTT CGGCGCCTATCACCTCTATCTGCCGGGGCTGCTCAAGCCCGCGCCGCGCA GCCTCGCGGCACAGCTCTGGATGCTCAAGCACGAGAGCCCGGAGGCGAAG GGTCTCGACGATTTGCAGCGGCTCGCGGGCAGCGGTCGCACCTCGATCCC GATCGATGCGGAAACGCCGAAGGCGCTCTACCGCACCGTCGGCTATCGCA TCTGCGGCGAGCGTGCGATCCGCGTCGACATTCTGGAGCGGCTGGCCGAT CTCGTCCGTCCGGCGCTGGCGTGGCGCGAAGGCGCGACCGGTTCGAAGCC GGCGGGCGCATTCGATGGCCGCGGGTTTACTGTGACCGGTGCGATGACGT CGCTGACCGGCGCATCGGGCGAGGATTTCGCTTCGATTCTGCGGTCGCTC GGCTATCGCATGGAGAAGCGGCCCAAAACGCTGGAGACTCCGAAACCTGC GGAAGCGGTTGCCGCTGAAACGCCTGCGGCTGAAGCGACCACAGAAGCTG CGCCTGTTGAAGTCACGGCGGATGCGCCCGATGCGGTGCCTGCGGTCGAG ACGCTCGAAGCGCCCGCTGCGCCGAAGCCGCTGCTGCCGGAGCCGCCGGA ATTCGTCACCGCGCCGACGCCGAGCCCCGATCTCGTTCCCGAACCGACCG CGGATGCGCAGCCTGAAACTGTGAGCGAAGCTGTTGCGACGACTGAAGCG ACGGCGGACGCGGCACCTGCTGCTGCGACTCCTGCCGAACCGGAGATGGT CGAGGTCTGGCGTCCCGGCCGTCCGGGCGGCAATCAGCGCCGCCGTGAAG ACGAAAAGCAGGGCGGCCGTCATCGCCGGCGTCATCGTCCGGATGCCGCG AAGACGGATGGTCAGCCCGCCGCCGATGGTGCGGTTGCTGCGGCGCCTGC CGAAGGCGTGGCTGCCGCTGCAACGCCTGGCGCTGAGGGCGAGCGCAAGG AGCGTCATGGCCGTTCGCGGCATCGCCGCCACGGTGGTGGCGAACGCAAA GAGGGCGGCGAGCAACGCGCCGACAACAGGCCGAAGCGTCCGGAGGGCGA TCGCAAGGGACCGCGTCCCGAGCGCGGGGACCGTCCGGATCGCGGACCGC GGCGCGATCGCGATCGCGACAGAGGACGTGACAAGGGCCCCGACCGGATC TGGGGTTCGTCGGAGGCGCCGCGCAGCGGCAAGGAGCCCGATCCGAATTC GCCGTTCGCCAAGCTGCTCGCTCTGAAGGCGCAGCTTGAGACCAACAAGG AGCGGCCCTGA
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig16275:68..1528+

>mRNA_P-wetherbeei_contig16275.1.1 ID=mRNA_P-wetherbeei_contig16275.1.1|Name=mRNA_P-wetherbeei_contig16275.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1236bp|location=Sequence derived from alignment at P-wetherbeei_contig16275:68..1528+ (Phaeothamnion wetherbeei SAG_119_79)
TGGCTCAAGTCTCACATCGAGCGATTGCTGGGCCCGCTGTTCGCGCTGGC
TGCGGCCGAGGATATCACCGGCATCGCGCGCGGCGTTGCGTTTCAACTGA
TCGAAGCGATCGGCGTTCTCGAACGCCAGAAGGTCGCCGAGGAGGTGAAG
GGCCTCGATCAGCCGTCGCGCGCCACGCTGCGCAAGTACGGAATCCGCTT
CGGCGCCTATCACCTCTATCTGCCGGGGCTGCTCAAGCCCGCGCCGCGCA
GCCTCGCGGCACAGCTCTGGATGCTCAAGCACGAGAGCCCGGAGGCGAAG
GGTCTCGACGATTTGCAGCGGCTCGCGGGCAGCGGTCGCACCTCGATCCC
GATCGATGCGGAAACGCCGAAGGCGCTCTACCGCACCGTCGGCTATCGCA
TCTGCGGCGAGCGTGCGATCCGCGTCGACATTCTGGAGCGGCTGGCCGAT
CTCGTCCGTCCGGCGCTGGCGTGGCGCGAAGGCGCGACCGGTTCGAAGCC
GGCGGGCGCATTCGATGGCCGCGGGTTTACTGTGACCGGTGCGATGACGT
CGCTGACCGGCGCATCGGGCGAGGATTTCGCTTCGATTCTGCGGTCGCTC
GGCTATCGCATGGAGAAGCGGCCCAAAACGCTGGAGACTCCGAAACCTGC
GGAAGCGGTTGCCGCTGAAACGCCTGCGGCTGAAGCGACCACAGAAGCTG
CGCCTGTTGAACCTGAAACTGTGAGCGAAGCTGTTGCGACGACTGAAGCG
ACGGCGGACGCGGCACCTGCTGCTGCGACTCCTGCCGAACCGGAGATGGT
CGAGGTCTGGCGTCCCGGCCGTCCGGGCGGCAATCAGCGCCGCCGTGAAG
ACGAAAAGCAGGGCGGCCGTCATCGCCGGCGCGTGGCTGCCGCTGCAACG
CCTGGCGCTGAGGGCGAGCGCAAGGAGCGTCATGGCCGTTCGCGGCATCG
CCGCCACGGTGGTGGCGAACGCAAAGAGGGCGGCGAGCAACGCGCCGACA
ACAGGCCGAAGCGTCCGGAGGGCGATCGCAAGGGACCGCGTCCCGAGCGC
GGGGACCGTCCGGATCGCGGACCGCGGCGCGATCGCGATCGCGACAGAGG
ACGTGACAAGGGCCCCGACCGGATCTGGGGTTCGTCGGAGGCGCCGCGCA
GCGGCAAGGAGCCCGATCCGAATTCGCCGTTCGCCAAGCTGCTCGCTCTG
AAGGCGCAGCTTGAGACCAACAAGGAGCGGCCCTGA
back to top