mRNA_P-wetherbeei_contig16225.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig16225.1.2 vs. uniprot
Match: D7FIM0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIM0_ECTSI) HSP 1 Score: 213 bits (541), Expect = 5.010e-60 Identity = 114/200 (57.00%), Postives = 146/200 (73.00%), Query Frame = 1
Query: 7 PGYRRVRPCSYCHVPYHHAAAPFSNMRLVPCGICRRKWVAETVLATVEPPPGLKTRGGGVLVEARVVRVQRRTPSGEADAMRISDHLPFVEYELQRQLMLKLRLLGMNAAWAVHTQVQIGAALVIGTIAATACYVESLPPPAALQISR--------GVEVRDAGDRRLVGLHKAIEQAAAINRQRLAALAPRRPRRTYRR 582
P +R VRPCSY HVPYHH APF++MRLVPCG+C RKWVAETVL+TVE P L +RG G LVEARV RV RR + E +A+R+S+ LPF+EYELQRQLMLKL+ LG+NAA+++ + +Q+G L++G+I+ATA YVESLP P L ++R G DA RR++ L +E+ A+NRQRL ALAP+R R RR
Sbjct: 86 PPFRTVRPCSYFHVPYHHRKAPFADMRLVPCGMCGRKWVAETVLSTVEAPENLISRGEGCLVEARVCRVHRRQGTSELEAIRVSEALPFMEYELQRQLMLKLKCLGVNAAFSLRSDIQLGPRLMVGSISATAVYVESLPTPPQLVVARPPRSLHQDGGXXXDAR-RRVLALASRVERIGAVNRQRLQALAPKRRRLRGRR 284
BLAST of mRNA_P-wetherbeei_contig16225.1.2 vs. uniprot
Match: A0A7S4VGH9_9STRA (Hypothetical protein n=4 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VGH9_9STRA) HSP 1 Score: 201 bits (512), Expect = 3.800e-56 Identity = 101/189 (53.44%), Postives = 135/189 (71.43%), Query Frame = 1
Query: 16 RRVRPCSYCHVPYHHAAAPFSNMRLVPCGICRRKWVAETVLATVEPPPGLKTRGGGVLVEARVVRVQRRTPSGEADAMRISDHLPFVEYELQRQLMLKLRLLGMNAAWAVHTQVQIGAALVIGTIAATACYVESLPPPAALQISRGVEVRDAGDRRLVGLHKAIEQAAAINRQRLAALAPRRPRRTYRR 582
R RPCSYCHVPYHH APF+NM+LVPC +C +KWV E +LATVEPP L RG GV ++ARV+R R + E DA+ +S+ LPF+EYEL RQLM+KL++LG NAA+++ ++V +G+ L+IGT ATA Y +++PPP L+ISR + V+D D +LV L IE+ + NR RLA A RR R R+
Sbjct: 354 RPARPCSYCHVPYHHRLAPFTNMKLVPCLLCGKKWVPEVILATVEPPARLPVRGQGVFIQARVMR-SRPKATNETDALAVSESLPFLEYELARQLMVKLKILGRNAAFSLKSEVDVGSQLIIGTATATALYCDAMPPPRVLEISRTIAVQDEEDHQLVKLQHQIEKISERNRHRLALSAQRRGERLRRK 541
BLAST of mRNA_P-wetherbeei_contig16225.1.2 vs. uniprot
Match: A0A7S4AET6_9STRA (Hypothetical protein n=2 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AET6_9STRA) HSP 1 Score: 199 bits (507), Expect = 9.080e-56 Identity = 96/179 (53.63%), Postives = 130/179 (72.63%), Query Frame = 1
Query: 16 RRVRPCSYCHVPYHHAAAPFSNMRLVPCGICRRKWVAETVLATVEPPPGLKTRGGGVLVEARVVRVQRRTPSGEADAMRISDHLPFVEYELQRQLMLKLRLLGMNAAWAVHTQVQIGAALVIGTIAATACYVESLPPPAALQISRGVEVRDAGDRRLVGLHKAIEQAAAINRQRLAALA 552
R +PCSYCHVPYHH APF+NM+LVPC +C +KWV E VLAT EPP L RG GV ++ARV R ++ + E+DA+ +S+ LPF+EYEL RQLMLKL++LG NAA+++ +V +G +L+I T+ ATA Y ++P P L+ISR + V+D D +LV L + IEQ +A NRQRL+ A
Sbjct: 59 RDAKPCSYCHVPYHHRVAPFTNMKLVPCMLCGKKWVPEVVLATCEPPARLPIRGPGVFIQARVCRTRQPERNSESDALAVSEALPFLEYELARQLMLKLKVLGRNAAFSLKNEVDVGRSLIISTVTATAVYCTAMPSPRILEISRTIAVQDEEDEKLVKLQRQIEQISAKNRQRLSTAA 237
BLAST of mRNA_P-wetherbeei_contig16225.1.2 vs. uniprot
Match: A0A448YU60_9STRA (C2 domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YU60_9STRA) HSP 1 Score: 199 bits (505), Expect = 3.450e-55 Identity = 98/189 (51.85%), Postives = 134/189 (70.90%), Query Frame = 1
Query: 16 RRVRPCSYCHVPYHHAAAPFSNMRLVPCGICRRKWVAETVLATVEPPPGLKTRGGGVLVEARVVRVQRRTPSGEADAMRISDHLPFVEYELQRQLMLKLRLLGMNAAWAVHTQVQIGAALVIGTIAATACYVESLPPPAALQISRGVEVRDAGDRRLVGLHKAIEQAAAINRQRLAALAPRRPRRTYRR 582
R +PCSYCHVPYHH APF+NM+LVPC +C +KWV E VLAT EPP L RG GV ++ARV R + + E+DA+ +S+ LPF+EYEL RQLMLKL++LG NAA+++ +V +G +L+I T+ ATA Y ++P P L+ISR + V+D D++LV L + IE+ +A NRQRL+ A R R +R
Sbjct: 617 RDAKPCSYCHVPYHHRLAPFTNMKLVPCMLCGKKWVPEVVLATCEPPSRLPIRGPGVFIQARVCRSRPAERNSESDALAVSEALPFLEYELARQLMLKLKVLGRNAAFSLKNEVDVGKSLIISTVTATAVYCTAMPSPRILEISRTIAVQDEEDQKLVNLQRQIEKISAKNRQRLSTAAQRHLERVRKR 805
BLAST of mRNA_P-wetherbeei_contig16225.1.2 vs. uniprot
Match: A0A7S4N180_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4N180_9STRA) HSP 1 Score: 196 bits (499), Expect = 2.140e-54 Identity = 102/192 (53.12%), Postives = 135/192 (70.31%), Query Frame = 1
Query: 16 RRVRPCSYCHVPYHHAAAPFSNMRLVPCGICRRKWVAETVLATVEPPPGLKTRGGGVLVEARVVRVQRRTPSGEADAMRISDHLPFVEYELQRQLMLKLRLLGMNAAWAVHTQVQIGAALVIGTIAATACYVESLPPPAALQISRGVEVRDAGDRRLVGLHKAIEQAAAINRQRLAALAPR---RPRRTYRR 582
R RPCSYCHVPYHH APF+NM+LVPC +C +KWV E +LATVEPP L RG GV ++ARV R R +GE DA+ +S+ LPF+EYEL RQLMLKL++LG NAA+++ ++V +G+ L+I T ATA Y +++P P AL+ISR + V+D D +LV L + IE ++ NR LA A R + RR Y R
Sbjct: 399 RPARPCSYCHVPYHHRLAPFANMKLVPCLLCGKKWVPEVILATVEPPERLPVRGSGVFIQARVCR-SRPKSTGETDALAVSEALPFLEYELARQLMLKLKVLGRNAAFSLKSEVDVGSQLIIATATATALYCDAMPAPRALEISRTIAVQDEEDHQLVRLQRQIENISSKNRLWLAMAAQREAAKKRREYAR 589
BLAST of mRNA_P-wetherbeei_contig16225.1.2 vs. uniprot
Match: A0A1E7F3B6_9STRA (C2 domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F3B6_9STRA) HSP 1 Score: 196 bits (499), Expect = 2.210e-54 Identity = 98/190 (51.58%), Postives = 133/190 (70.00%), Query Frame = 1
Query: 16 RRVRPCSYCHVPYHHAAAPFSNMRLVPCGICRRKWVAETVLATVEPPPGLKTRGGGVLVEARVVRVQRRTPSGEADAMRISDHLPFVEYELQRQLMLKLRLLGMNAAWAVHTQVQIGAALVIGTIAATACYVESLPPPAALQISRGVEVRDAGDRRLVGLHKAIEQAAAINRQRLAALAPRRPRRTYRRR 585
R +PCS+CHVPYHH APF+NM+LVPC +C +KWV E +LAT EPP L RG GV ++ARV R + + E+DA+ +S+ LPF+EYEL RQLMLKL++LG NAA+++ +V +G +L+I T+ ATA Y ++P P L+ISR + V+D D +LV L K IE+ +A NRQRL A R R +RR
Sbjct: 597 RDAKPCSFCHVPYHHRLAPFTNMKLVPCMLCGKKWVPEVLLATCEPPARLPIRGPGVFIQARVCRSRPPEKNSESDALAVSEALPFLEYELARQLMLKLKVLGRNAAFSLKNEVDVGRSLIISTVTATAVYCTAMPSPRILEISRTIAVQDEEDHQLVKLQKQIEKISAKNRQRLLTAAQRHVERVRKRR 786
BLAST of mRNA_P-wetherbeei_contig16225.1.2 vs. uniprot
Match: B8BXV2_THAPS (C2 domain-containing protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BXV2_THAPS) HSP 1 Score: 194 bits (494), Expect = 6.130e-54 Identity = 93/172 (54.07%), Postives = 129/172 (75.00%), Query Frame = 1
Query: 16 RRVRPCSYCHVPYHHAAAPFSNMRLVPCGICRRKWVAETVLATVEPPPGLKTRGGGVLVEARVVRVQRRTPSGEADAMRISDHLPFVEYELQRQLMLKLRLLGMNAAWAVHTQVQIGAALVIGTIAATACYVESLPPPAALQISRGVEVRDAGDRRLVGLHKAIEQAAAINR 531
R RPCSYCHVPYHH APF+NM+LVPC +C +KWV E +LATVEPP L RG GV V+ARV R + R +GE+DA+ +S+ LPF+E++L RQLMLKL++LG NAA+++ +++ +G+ L++ T ATA Y E++PPP L+ISR + V+D D++LV L + IE +A NR
Sbjct: 600 RLARPCSYCHVPYHHRLAPFTNMKLVPCLLCGKKWVPEIILATVEPPSRLPIRGTGVFVQARVCRTRPRA-TGESDALAVSEALPFLEFDLARQLMLKLKILGRNAAFSLRSEIDVGSQLIVATATATAVYCEAMPPPRVLEISRTIAVQDEEDQQLVKLQRLIETFSARNR 770
BLAST of mRNA_P-wetherbeei_contig16225.1.2 vs. uniprot
Match: A0A7S2RRS9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RRS9_9STRA) HSP 1 Score: 175 bits (443), Expect = 6.950e-52 Identity = 82/144 (56.94%), Postives = 108/144 (75.00%), Query Frame = 1
Query: 16 RRVRPCSYCHVPYHHAAAPFSNMRLVPCGICRRKWVAETVLATVEPPPGLKTRGGGVLVEARVVRVQRRTPSGEADAMRISDHLPFVEYELQRQLMLKLRLLGMNAAWAVHTQVQIGAALVIGTIAATACYVESLPPPAALQIS 447
R RPCSYCHVPYHH APFSNM+LVPC +C +KWV E +LAT+EPP L RG G ++ARV R R +GE DA+ +S+ LPF+EYEL RQLMLKL++LG NAA+++ ++V +G+ L+I T ATA + +++PPP LQIS
Sbjct: 61 RSARPCSYCHVPYHHRLAPFSNMKLVPCLLCGKKWVPEVILATIEPPARLPVRGPGAFIQARVCR-SRPKSTGETDALAVSEALPFLEYELARQLMLKLKVLGRNAAFSLKSEVDVGSQLIIATATATALFCDAMPPPRVLQIS 203
BLAST of mRNA_P-wetherbeei_contig16225.1.2 vs. uniprot
Match: F0WE18_9STRA (Uncharacterized protein AlNc14C71G4880 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WE18_9STRA) HSP 1 Score: 184 bits (468), Expect = 2.050e-50 Identity = 91/171 (53.22%), Postives = 121/171 (70.76%), Query Frame = 1
Query: 28 PCSYCHVPYHHAAAPFSNMRLVPCGICRRKWVAETVLATVEPPPGLKTRGGGVLVEARVVRVQRRTPSGEADAMRISDHLPFVEYELQRQLMLKLRLLGMNAAWAVHTQVQIGAALVIGTIAATACYVESLPPPAALQISRGVEVRDAGDRRLVGLHKAIEQAAAINRQRL 540
PC CH+PY + APFSNMR+V CGICR KWV E +LA++EPP GL G G V+ARV R QRR +G+A+A +SD LPFVEYEL RQL +K+++LGMNA + +Q+QIG AL++G I T Y+ +LP P L+I R +E++D DRRLV L IE +A N+++L
Sbjct: 429 PCLSCHIPYSRSLAPFSNMRMVRCGICRNKWVPEMLLASIEPPTGLAIVGSGCFVQARVCR-QRRKGTGDANATIVSDALPFVEYELYRQLTVKMKVLGMNAMFGFDSQIQIGGALIVGVITGTGFYLPALPSPPTLRIERNIEIKDDEDRRLVSLQNEIEALSASNKEKL 598
BLAST of mRNA_P-wetherbeei_contig16225.1.2 vs. uniprot
Match: K0T113_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0T113_THAOC) HSP 1 Score: 185 bits (469), Expect = 2.300e-50 Identity = 90/172 (52.33%), Postives = 120/172 (69.77%), Query Frame = 1
Query: 16 RRVRPCSYCHVPYHHAAAPFSNMRLVPCGICRRKWVAETVLATVEPPPGLKTRGGGVLVEARVVRVQRRTPSGEADAMRISDHLPFVEYELQRQLMLKLRLLGMNAAWAVHTQVQIGAALVIGTIAATACYVESLPPPAALQISRGVEVRDAGDRRLVGLHKAIEQAAAINR 531
R +PCSYCHVPYHH APF NM+LVPC +C +KWV ET+LAT EPP L RG G ++ARV R + + SGE DA+ +S+ LPF+E++L RQLMLKL++LG NAA+ + ++V +G L+I T ATA Y E++PPP L+I R + D D +LV L + IE +A NR
Sbjct: 368 RLAKPCSYCHVPYHHRQAPFQNMKLVPCQMCGKKWVPETILATCEPPSRLPIRGHGTFIQARVCRTRPKA-SGENDALAVSEALPFLEFDLARQLMLKLKILGRNAAFGLKSEVDVGGQLIIATATATAVYCEAMPPPRVLEIDRTIACLDEEDDQLVRLQRLIETISARNR 538 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16225.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig16225.1.2 >prot_P-wetherbeei_contig16225.1.2 ID=prot_P-wetherbeei_contig16225.1.2|Name=mRNA_P-wetherbeei_contig16225.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=211bp MRPGYRRVRPCSYCHVPYHHAAAPFSNMRLVPCGICRRKWVAETVLATVEback to top mRNA from alignment at P-wetherbeei_contig16225:4..1155- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig16225.1.2 ID=mRNA_P-wetherbeei_contig16225.1.2|Name=mRNA_P-wetherbeei_contig16225.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1152bp|location=Sequence derived from alignment at P-wetherbeei_contig16225:4..1155- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig16225:4..1155- >mRNA_P-wetherbeei_contig16225.1.2 ID=mRNA_P-wetherbeei_contig16225.1.2|Name=mRNA_P-wetherbeei_contig16225.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=633bp|location=Sequence derived from alignment at P-wetherbeei_contig16225:4..1155- (Phaeothamnion wetherbeei SAG_119_79)back to top |