mRNA_P-wetherbeei_contig16223.1.3 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig16223.1.3 vs. uniprot
Match: A0A7S2V3F7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V3F7_9STRA) HSP 1 Score: 161 bits (407), Expect = 5.940e-47 Identity = 78/124 (62.90%), Postives = 103/124 (83.06%), Query Frame = 1
Query: 22 VKINELRPN-SRGNNMVVHVLRNEIVVHKTRVDGSEVRIAEVLLADETGAVLLRGRNEQIDVLRPGSVVVVRNAAVEMFKSYIRLVVTKWGKISPHPDGVESTGPAPPAANVDNNISNVEYQLV 390
VKI L+P + G+N+V V++ E+V+ K R+DGS RIAEVLLADETG +++R RNEQID++ PG+VVVVRNA++EMFK Y+RLVVTKWGKI+ HPDG+EST PAP + N +NN+S+VEY+LV
Sbjct: 17 VKIGTLQPGPTHGHNLVGWVVKTEVVLEKPRIDGSSTRIAEVLLADETGCLVVRARNEQIDMMSPGNVVVVRNASIEMFKGYMRLVVTKWGKITAHPDGIESTPPAPSSTNTENNLSSVEYELV 140
BLAST of mRNA_P-wetherbeei_contig16223.1.3 vs. uniprot
Match: A0A484EGD7_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EGD7_BRELC) HSP 1 Score: 139 bits (351), Expect = 1.700e-38 Identity = 69/128 (53.91%), Postives = 93/128 (72.66%), Query Frame = 1
Query: 19 DVKINELRPNSRGNNMVVHVLRNEIVVHKTRVDGSEVRIAEVLLADETGAVLLRGRNEQIDVLRPGSVVVVRNAAVEMFKSYIRLVVTKWGKISPHPDGVESTGPAPPAANVDNNISNVEYQLVPAQS 402
DVK +L P S+G+N+V+ V+ + V K R DG+ RIAEV+LADETG V RN+QID+L+ G VVV+RN+ ++F ++RL VT+WGK+S HPDG+ ST P PP+ N DNNIS VEY+LV A +
Sbjct: 26 DVKTTDLTPGSQGHNLVLQVVSSAPTVEKKRFDGTISRIAEVVLADETGCVTFTARNDQIDMLKDGQVVVLRNSNADIFNGFMRLNVTQWGKLSLHPDGIASTPPPPPSVNTDNNISAVEYELVTADT 153
BLAST of mRNA_P-wetherbeei_contig16223.1.3 vs. uniprot
Match: D0NL22_PHYIT (Uncharacterized protein n=14 Tax=Phytophthora TaxID=4783 RepID=D0NL22_PHYIT) HSP 1 Score: 138 bits (347), Expect = 5.030e-38 Identity = 70/125 (56.00%), Postives = 91/125 (72.80%), Query Frame = 1
Query: 16 TDVKINELRPNSRGNNMVVHVLRNEIVVHKTRVDGSEVRIAEVLLADETGAVLLRGRNEQIDVLRPGSVVVVRNAAVEMFKSYIRLVVTKWGKISPHPDGVESTGPAPPAANVDNNISNVEYQLV 390
T VK+ +L P S+G+N+V+ V+ V K R DG+ RIAE +LADETG V L RN+QID+L+ G VVVRN+ ++F ++RL VT+WGK+SPHPDGV ST PAPP N D+NIS VEY+LV
Sbjct: 15 TYVKVQDLTPGSQGHNLVLQVVSIAPTVEKKRYDGTISRIAEAVLADETGCVTLTARNDQIDMLKEGLDVVVRNSNADIFNGFMRLNVTQWGKLSPHPDGVASTPPAPPKVNTDSNISAVEYELV 139
BLAST of mRNA_P-wetherbeei_contig16223.1.3 vs. uniprot
Match: A0A662WJV9_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WJV9_9STRA) HSP 1 Score: 137 bits (345), Expect = 7.910e-38 Identity = 70/130 (53.85%), Postives = 90/130 (69.23%), Query Frame = 1
Query: 1 PILSRTDVKINELRPNSRGNNMVVHVLRNEIVVHKTRVDGSEVRIAEVLLADETGAVLLRGRNEQIDVLRPGSVVVVRNAAVEMFKSYIRLVVTKWGKISPHPDGVESTGPAPPAANVDNNISNVEYQLV 390
P L DVK+ +L P S+G+N+V+ V+ V K R DGS RIAE +LADETG V+ RN QID+L VVVVRN+ ++F ++RL VT+WGK+S HPDGVEST P PP+ N NNIS +EY+LV
Sbjct: 1 PRLCSVDVKVQDLTPGSQGHNLVLQVVSIAPTVEKKRYDGSTSRIAEAVLADETGCVIFTARNGQIDLLEEQLVVVVRNSNADIFNGFMRLNVTQWGKLSLHPDGVESTPPPPPSVNTGNNISAIEYELV 130
BLAST of mRNA_P-wetherbeei_contig16223.1.3 vs. uniprot
Match: A0A024TNP1_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TNP1_9STRA) HSP 1 Score: 135 bits (340), Expect = 7.040e-37 Identity = 69/150 (46.00%), Postives = 98/150 (65.33%), Query Frame = 1
Query: 1 PILSRTDVKINELRPNSRGNNMVVHVLRNEIVVHKTRVDGSEVRIAEVLLADETGAVLLRGRNEQIDVLRPGSVVVVRNAAVEMFKSYIRLVVTKWGKISPHPDGVESTGPAPPAANVDNNISNVEYQLVPAQSGSGAPTDRNVHEEDDG 450
P+ T VK+ +L P ++G+ +VV V + KTR+DGS VRI E + DETG V+L RNEQI ++ G V+V+RNA+ +++ ++RL VT+WGKI+PHPDG+ ST AP + N NN+S +EY+LVPA+ HEE DG
Sbjct: 9 PLRRATYVKVKDLAPATKGHCLVVQVHAIDPATEKTRIDGSIVRIVEATVGDETGTVVLNARNEQIKLVEVGRVLVIRNASADVYNGFLRLNVTQWGKIAPHPDGIASTPHAPQSVNTSNNVSGIEYELVPAEDVD--------HEEGDG 150
BLAST of mRNA_P-wetherbeei_contig16223.1.3 vs. uniprot
Match: A0A3R7G879_9STRA (Uncharacterized protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7G879_9STRA) HSP 1 Score: 139 bits (351), Expect = 7.780e-37 Identity = 70/123 (56.91%), Postives = 91/123 (73.98%), Query Frame = 1
Query: 22 VKINELRPNSRGNNMVVHVLRNEIVVHKTRVDGSEVRIAEVLLADETGAVLLRGRNEQIDVLRPGSVVVVRNAAVEMFKSYIRLVVTKWGKISPHPDGVESTGPAPPAANVDNNISNVEYQLV 390
VK+ +L P S+G+N+V+ V+ V K R DGS RIAE +LADETG V RN+QID+L+ G VVVVRN+ ++F ++RL VT+WGK+S HPDGVEST PAPP+ N DNNIS +EY+LV
Sbjct: 168 VKVQDLTPGSQGHNLVLQVVSIAATVEKKRYDGSISRIAESVLADETGCVTFTARNDQIDMLKEGLVVVVRNSNADIFNGFMRLNVTQWGKLSLHPDGVESTPPAPPSVNSDNNISAIEYELV 290
BLAST of mRNA_P-wetherbeei_contig16223.1.3 vs. uniprot
Match: A0A0P1AVD7_PLAHL (RFA1, RPA1, rpa n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AVD7_PLAHL) HSP 1 Score: 135 bits (339), Expect = 8.080e-37 Identity = 67/123 (54.47%), Postives = 88/123 (71.54%), Query Frame = 1
Query: 22 VKINELRPNSRGNNMVVHVLRNEIVVHKTRVDGSEVRIAEVLLADETGAVLLRGRNEQIDVLRPGSVVVVRNAAVEMFKSYIRLVVTKWGKISPHPDGVESTGPAPPAANVDNNISNVEYQLV 390
VK +L P S G+N+V+ V+ V K R DGS RIAEV+LADETG V RN+QID+L+ G VVV+RN+ +++ ++RL VT WGK+S HPDG+EST P PP+ N DNNIS +EY+LV
Sbjct: 17 VKAKDLTPGSHGHNLVLQVVSVAATVEKKRYDGSVSRIAEVVLADETGCVTFTARNDQIDMLKEGLVVVLRNSNADIYNGFMRLNVTLWGKLSLHPDGIESTPPPPPSINTDNNISAIEYELV 139
BLAST of mRNA_P-wetherbeei_contig16223.1.3 vs. uniprot
Match: A0A3M6VUP1_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VUP1_9STRA) HSP 1 Score: 133 bits (334), Expect = 4.710e-36 Identity = 66/125 (52.80%), Postives = 90/125 (72.00%), Query Frame = 1
Query: 16 TDVKINELRPNSRGNNMVVHVLRNEIVVHKTRVDGSEVRIAEVLLADETGAVLLRGRNEQIDVLRPGSVVVVRNAAVEMFKSYIRLVVTKWGKISPHPDGVESTGPAPPAANVDNNISNVEYQLV 390
T VK+ +L P S+G+N+V+ V+ VV K R DG+ RIAE +LADETG V RN+QIDVL+ G V+V+RN ++F ++RL VT+WGK+S HPDGV ST P PP+ N +NN+S +EY+LV
Sbjct: 16 TYVKVQDLTPGSQGHNLVLQVVSVAPVVEKKRYDGAVSRIAEAVLADETGCVTFTARNDQIDVLKEGLVLVMRNTNADIFNGFMRLNVTQWGKMSVHPDGVASTPPPPPSINTENNMSAIEYELV 140
BLAST of mRNA_P-wetherbeei_contig16223.1.3 vs. uniprot
Match: A0A3F2RK22_9STRA (Uncharacterized protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RK22_9STRA) HSP 1 Score: 139 bits (351), Expect = 5.630e-36 Identity = 71/125 (56.80%), Postives = 92/125 (73.60%), Query Frame = 1
Query: 16 TDVKINELRPNSRGNNMVVHVLRNEIVVHKTRVDGSEVRIAEVLLADETGAVLLRGRNEQIDVLRPGSVVVVRNAAVEMFKSYIRLVVTKWGKISPHPDGVESTGPAPPAANVDNNISNVEYQLV 390
T VK+ +L P S+G+N+V+ V+ V K R DGS RIAE +LADETG V RN+QID+L+ G VVVVRN+ ++F ++RL VT+WGK+S HPDGVEST PAPP+ N DNNIS +EY+LV
Sbjct: 260 TYVKVQDLTPGSQGHNLVLQVVSIAATVEKKRYDGSISRIAESVLADETGYVTFTARNDQIDMLKEGLVVVVRNSNADIFNGFMRLNVTQWGKLSLHPDGVESTPPAPPSVNSDNNISAIEYELV 384
BLAST of mRNA_P-wetherbeei_contig16223.1.3 vs. uniprot
Match: A0A5D6XHX4_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XHX4_9STRA) HSP 1 Score: 132 bits (331), Expect = 1.500e-35 Identity = 64/125 (51.20%), Postives = 88/125 (70.40%), Query Frame = 1
Query: 16 TDVKINELRPNSRGNNMVVHVLRNEIVVHKTRVDGSEVRIAEVLLADETGAVLLRGRNEQIDVLRPGSVVVVRNAAVEMFKSYIRLVVTKWGKISPHPDGVESTGPAPPAANVDNNISNVEYQLV 390
T K+ +L P S+G+N+V+ V+ K R DG+ RIAE +LADETG V RNEQID+L G+V+VVRN+ ++F ++RL VT+WGK++PHPDG+ ST AP N DNN+S+VEY+LV
Sbjct: 19 TYAKVKDLTPGSQGHNLVLRVVNVAPTTEKKRYDGTVSRIAEAMLADETGCVTFTARNEQIDLLHKGAVLVVRNSNADIFNGFMRLNVTQWGKLAPHPDGIASTPKAPVDTNTDNNVSSVEYELV 143 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16223.1.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig16223.1.3 >prot_P-wetherbeei_contig16223.1.3 ID=prot_P-wetherbeei_contig16223.1.3|Name=mRNA_P-wetherbeei_contig16223.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=148bp MVVHVLRNEIVVHKTRVDGSEVRIAEVLLADETGAVLLRGRNEQIDVLRPback to top mRNA from alignment at P-wetherbeei_contig16223:2..1516- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig16223.1.3 ID=mRNA_P-wetherbeei_contig16223.1.3|Name=mRNA_P-wetherbeei_contig16223.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1515bp|location=Sequence derived from alignment at P-wetherbeei_contig16223:2..1516- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig16223:2..1516- >mRNA_P-wetherbeei_contig16223.1.3 ID=mRNA_P-wetherbeei_contig16223.1.3|Name=mRNA_P-wetherbeei_contig16223.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=444bp|location=Sequence derived from alignment at P-wetherbeei_contig16223:2..1516- (Phaeothamnion wetherbeei SAG_119_79)back to top |