prot_P-wetherbeei_contig1617.1.7 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig1617.1.7
Unique Nameprot_P-wetherbeei_contig1617.1.7
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length409
Homology
BLAST of mRNA_P-wetherbeei_contig1617.1.7 vs. uniprot
Match: D7FVL9_ECTSI (Xel-1 protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVL9_ECTSI)

HSP 1 Score: 192 bits (489), Expect = 3.730e-52
Identity = 107/190 (56.32%), Postives = 128/190 (67.37%), Query Frame = 0
Query:   33 QTLFEAHGEVQHVKVVLDRTTGKSMGYGFVKFAADEGAATAVTATNGMVIGQKRIKVSIARPSSKDIKRSKLYVTNLPHGFGKDEVTQLFARYGTIIECRTLCDKKTGASRCTAFVQFDRRCEAQQALQSLNGAQLAGTKRPLLVKFAEDYHRRVQQRRSPGGSSVGVGGGIAGGSIGMMAPRGMGSLPG 222
            + +F  HG++ HVKVV DR+TGKSMGYGFVKF  +E AA A  A NGM I +KRIKVSIARPSSKDIK SKLYVTNLP  F +D+V ++F       +CRTL D KT  SRCTAFVQFD R EA+ AL+ +NG  L G K+ LLVKFAED+HRRVQ++                G  G+   RGM S+ G
Sbjct:  125 RNMFAVHGDLAHVKVVYDRSTGKSMGYGFVKFTTNEAAAAATLAINGMAIDRKRIKVSIARPSSKDIKNSKLYVTNLPDHFSQDQVVEVFE------QCRTLVDPKTTISRCTAFVQFDTRREAKDALKFMNGHVLPGAKKGLLVKFAEDHHRRVQRQEQ--------------GQHGVKGGRGMDSIQG 294          
BLAST of mRNA_P-wetherbeei_contig1617.1.7 vs. uniprot
Match: A0A7R9UBS9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UBS9_9STRA)

HSP 1 Score: 146 bits (368), Expect = 7.670e-37
Identity = 81/154 (52.60%), Postives = 109/154 (70.78%), Query Frame = 0
Query:   35 LFEAHGEVQHVKVVLDRTTGKSMGYGFVKFAADEGAATAVTATNGMVIGQKRIKVSIARPSSK--DIKRSKLYVTNLPHGFGKDEVTQLFARYGTIIECRTLCDKKTGASRCTAFVQFDRRCEAQQALQSLNGAQLAGTKRPLLVKFAEDYHRR 186
            LF AHGEV+ VK+V DR TG S+ YGFVKF  D+ AATA+ A NG+ IGQKR+KVSIARP+S   +++ +KLYV+ +P  + KD+V +LF R+G I+ECR L D+K G SRCTAFV    +  A+ AL  ++G QL G  R ++VK A + + R
Sbjct:   47 LFSAHGEVESVKIVRDRETGMSLCYGFVKFKKDDCAATALEALNGLDIGQKRLKVSIARPASGVWNLRNNKLYVSYIPKTYTKDDVCRLFNRFGRILECRVLYDEK-GESRCTAFVHMSTKAAAEAALV-MHGVQLQGATRGMVVKMAHNKNAR 198          
BLAST of mRNA_P-wetherbeei_contig1617.1.7 vs. uniprot
Match: A0A7S3HB55_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HB55_9STRA)

HSP 1 Score: 146 bits (369), Expect = 4.440e-36
Identity = 85/190 (44.74%), Postives = 115/190 (60.53%), Query Frame = 0
Query:   35 LFEAHGEVQHVKVVLDRTTGKSMGYGFVKFAADEGAATAVTATNGMVIGQKRIKVSIARPSSKDIKRSKLYVTNLPHGFGKDEVTQLFARYGTIIECRTLCDKKTGASRCTAFVQFDRRCEAQQALQSLNGAQLAGTKRPLLVKFAEDYHRRVQQRR---------------SPGGSS-----VGVGGGI 204
            LF   GE+   KVV DR T KS+GYGFVKF  ++ A  A+   NG  I  K +KVS+ARP+S +I+  KLYVTNLP  + + +V  LF  +G IIECR L D+ +  ++  AFVQFD + +A  AL SLNG QL G +R L+VK+AED H++ +  R               +PGG+S     +G+GGG 
Sbjct:   55 LFVEFGEIVSAKVVTDRNTKKSLGYGFVKFLCEDDAKLAIQRLNGFTIDNKCLKVSVARPASLEIRNCKLYVTNLPKDYTEIDVIHLFQEFGDIIECRVLKDRNSRTNKGVAFVQFDNKTQANNAL-SLNGCQLEGGQRGLVVKYAEDQHKKREMDRLQNLTTHNVYRYLPLAPGGASGSGEDMGMGGGF 243          
BLAST of mRNA_P-wetherbeei_contig1617.1.7 vs. uniprot
Match: I2CPF3_NANGC (Elav-like protein 2 (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CPF3_NANGC)

HSP 1 Score: 142 bits (358), Expect = 4.150e-35
Identity = 76/167 (45.51%), Postives = 109/167 (65.27%), Query Frame = 0
Query:   35 LFEAHGEVQHVKVVLDRTTGKSMGYGFVKFAADEGAATAVTATNGMVIGQKRIKVSIARPSSKDIKRSKLYVTNLPHGFGKDEVTQLFARYGTIIECRTLCDKKTGASRCTAFVQFDRRCEAQQALQSLNGAQLAGTKRPLLVKFAEDY--HRRVQQRRSPGGSSVG 199
            LF+  G+V+  +V+ ++ +G+S+GYGFVK+   + A +A+   NG  +  KRIKVS+ARP+S++ K +KLYV NLPH F K EV QLFA +G IIECR L +  +G  R  AFVQ++ R EA  A++SL+   + G  RPL+VK A+D   H R  Q++  G    G
Sbjct:  135 LFQDFGQVESARVIREKGSGRSLGYGFVKYKDPQSADSAILTRNGHQVYGKRIKVSVARPASEEHKHTKLYVANLPHHFTKAEVIQLFAPHGRIIECRLLMEANSGRFRGIAFVQYNTRQEAAAAIRSLHDTPMEGVPRPLIVKLADDKGDHSRGWQQQGTGSGGYG 301          
BLAST of mRNA_P-wetherbeei_contig1617.1.7 vs. uniprot
Match: E2AL30_CAMFO (Sex-lethal-like protein n=5 Tax=Formicidae TaxID=36668 RepID=E2AL30_CAMFO)

HSP 1 Score: 140 bits (352), Expect = 4.220e-35
Identity = 83/194 (42.78%), Postives = 117/194 (60.31%), Query Frame = 0
Query:   34 TLFEAHGEVQHVKVVLDRTTGKSMGYGFVKFAADEGAATAVTATNGMVIGQKRIKVSIARPSSKDIKRSKLYVTNLPHGFGKDEVTQLFARYGTIIECRTLCDKKTGASRCTAFVQFDRRCEAQQALQSLNGAQLAGTKRPLLVKFAEDYHRR---------VQQRRSPGGSSVGVGGGIAGGSIGMMAPRGMG 218
            +LF   G V+  +V+ D  TG S G+GFV +A  E AATA++  NG+ +  KR+KVS ARPS ++IK + LYVTNLP    + ++ ++F++YG I++   L DK TG  R  AFV+FD+R EAQ+A+  L+G    G   PL VK AE++ ++             +S G S +GVGGG A G  G   P GMG
Sbjct:    8 SLFVTIGPVESCRVMKDYKTGYSYGFGFVNYAKAEDAATAISTLNGLQVQNKRLKVSFARPSGEEIKETNLYVTNLPRNITESQIDEIFSKYGNIVQKNILKDKLTGLPRGVAFVRFDKREEAQEAIAQLHGTIPEGGSEPLSVKIAEEHGKQKAAYYAGWQAGYNQSRGTSGIGVGGGRARGIGG--GPPGMG 199          
BLAST of mRNA_P-wetherbeei_contig1617.1.7 vs. uniprot
Match: A0A026WTV9_OOCBI (Sex-lethal-like protein n=1 Tax=Ooceraea biroi TaxID=2015173 RepID=A0A026WTV9_OOCBI)

HSP 1 Score: 140 bits (354), Expect = 6.090e-35
Identity = 77/179 (43.02%), Postives = 111/179 (62.01%), Query Frame = 0
Query:   34 TLFEAHGEVQHVKVVLDRTTGKSMGYGFVKFAADEGAATAVTATNGMVIGQKRIKVSIARPSSKDIKRSKLYVTNLPHGFGKDEVTQLFARYGTIIECRTLCDKKTGASRCTAFVQFDRRCEAQQALQSLNGAQLAGTKRPLLVKFAEDYHRR---------VQQRRSPGGSSVGVGGG 203
            +LF   G V+  +V+ D  TG S G+GFV +A  E AATA++  NG+ +  KR+KVS ARPS ++IK + LYVTNLP    + ++ ++F++YG I++   L DK TG  R  AFV+FD+R EAQ+A+  L+G    G   PL VK AE++ ++             +S GGS +GVGGG
Sbjct:   56 SLFVTIGPVESCRVMKDYKTGYSYGFGFVNYAKAEDAATAISTLNGLQVQNKRLKVSFARPSGEEIKETNLYVTNLPRNITESQIDEIFSKYGNIVQKNILKDKLTGLPRGVAFVRFDKREEAQEAIAQLHGTIPEGGSEPLSVKIAEEHGKQKAAYYAGWQAGYNQSRGGSGIGVGGG 234          
BLAST of mRNA_P-wetherbeei_contig1617.1.7 vs. uniprot
Match: UPI0011417D48 (sex-lethal homolog isoform X2 n=2 Tax=Formica exsecta TaxID=72781 RepID=UPI0011417D48)

HSP 1 Score: 142 bits (357), Expect = 9.330e-35
Identity = 86/201 (42.79%), Postives = 120/201 (59.70%), Query Frame = 0
Query:   34 TLFEAHGEVQHVKVVLDRTTGKSMGYGFVKFAADEGAATAVTATNGMVIGQKRIKVSIARPSSKDIKRSKLYVTNLPHGFGKDEVTQLFARYGTIIECRTLCDKKTGASRCTAFVQFDRRCEAQQALQSLNGAQLAGTKRPLLVKFAEDYHRR---------VQQRRSPGGSSVGVGGGIA---GGSIGMMAPRGMGSLPG 222
            +LF   G V+  +V+ D  TG S G+GFV +A  E AATA++  NG+ +  KR+KVS ARPS ++IK + LYVTNLP    + ++ ++F+++G I++   L DK TG  R  AFV+FD+R EAQ+A+  L+G    G   PL VK AE++ ++             +S G S VGVGGG A   GG  GM    G GS PG
Sbjct:  119 SLFVTIGPVESCRVMKDYKTGYSYGFGFVNYAKAEDAATAISTLNGLQVQNKRLKVSFARPSGEEIKETNLYVTNLPRNITESQIDEIFSKFGNIVQKNILKDKLTGLPRGVAFVRFDKREEAQEAIAQLHGTIPEGGSEPLSVKIAEEHGKQKAAYYAGWQAGYNQSRGTSGVGVGGGRARSIGGPPGMGVSGGGGSGPG 319          
BLAST of mRNA_P-wetherbeei_contig1617.1.7 vs. uniprot
Match: A0A091TJS9_PHALP (ELAV-like protein (Fragment) n=1 Tax=Phaethon lepturus TaxID=97097 RepID=A0A091TJS9_PHALP)

HSP 1 Score: 134 bits (336), Expect = 1.340e-33
Identity = 68/157 (43.31%), Postives = 102/157 (64.97%), Query Frame = 0
Query:   33 QTLFEAHGEVQHVKVVLDRTTGKSMGYGFVKFAADEGAATAVTATNGMVIGQKRIKVSIARPSSKDIKRSKLYVTNLPHGFGKDEVTQLFARYGTIIECRTLCDKKTGASRCTAFVQFDRRCEAQQALQSLNGAQLAGTKRPLLVKFAEDYHRRVQQ 189
            ++LF + GE++  K+V D+ TG+S+GYGFV +   + A  A+   NG+ +  K IKVS ARPSS  I+ + LYV+ LP    + E+ QLF++YG II  R L D+ TG SR   F++FD+R EA++A++ LNG + AG   P+ VKFA +  ++  Q
Sbjct:   19 KSLFGSIGEIESCKLVRDKITGQSLGYGFVNYVEPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKAMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPAGATEPITVKFANNPSQKNNQ 175          
BLAST of mRNA_P-wetherbeei_contig1617.1.7 vs. uniprot
Match: A0A158NPV4_ATTCE (Uncharacterized protein n=9 Tax=Attini TaxID=143999 RepID=A0A158NPV4_ATTCE)

HSP 1 Score: 139 bits (349), Expect = 1.460e-33
Identity = 77/178 (43.26%), Postives = 110/178 (61.80%), Query Frame = 0
Query:   34 TLFEAHGEVQHVKVVLDRTTGKSMGYGFVKFAADEGAATAVTATNGMVIGQKRIKVSIARPSSKDIKRSKLYVTNLPHGFGKDEVTQLFARYGTIIECRTLCDKKTGASRCTAFVQFDRRCEAQQALQSLNGAQLAGTKRPLLVKFAEDYHRR---------VQQRRSPGGSSVGVGG 202
            +LF   G V+  +V+ D  TG S G+GFV +A  E AATA++  NG+ +  KR+KVS ARPS ++IK + LYVTNLP    + ++ +LF++YG I++   L DK TG  R  AFV+FD+R EAQ+A+  L+G    G   PL VK AE++ ++             +S GGS +GVGG
Sbjct:  114 SLFVTIGPVESCRVMKDYKTGYSYGFGFVNYAKAEDAATAISTLNGLQVQNKRLKVSFARPSGEEIKETNLYVTNLPRNITESQIDELFSKYGNIVQKNILRDKLTGLPRGVAFVRFDKREEAQEAIARLHGTIPEGGSEPLSVKIAEEHGKQKAAYYAGWQAGYNQSRGGSGLGVGG 291          
BLAST of mRNA_P-wetherbeei_contig1617.1.7 vs. uniprot
Match: E2BWQ1_HARSA (Protein sex-lethal n=6 Tax=Harpegnathos saltator TaxID=610380 RepID=E2BWQ1_HARSA)

HSP 1 Score: 132 bits (333), Expect = 5.680e-33
Identity = 68/153 (44.44%), Postives = 100/153 (65.36%), Query Frame = 0
Query:   34 TLFEAHGEVQHVKVVLDRTTGKSMGYGFVKFAADEGAATAVTATNGMVIGQKRIKVSIARPSSKDIKRSKLYVTNLPHGFGKDEVTQLFARYGTIIECRTLCDKKTGASRCTAFVQFDRRCEAQQALQSLNGAQLAGTKRPLLVKFAEDYHRR 186
            +LF   G V+  +V+ D  TG S G+GFV +A  E AATA++  NG+ +  KR+KVS ARPS ++IK + LYVTNLP    + ++ ++F++YG I++   L DK TG  R  AFV+FD+R EAQ+A+  L+G    G   PL VK AE++ ++
Sbjct:   47 SLFVTIGPVESCRVMKDYKTGYSYGFGFVNYAKAEDAATAISTLNGLQVQNKRLKVSFARPSGEEIKETNLYVTNLPRNITESQIDEIFSKYGNIVQKNILKDKLTGLPRGVAFVRFDKREEAQEAIARLHGTIPEGGSEPLSVKIAEEHGKQ 199          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1617.1.7 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVL9_ECTSI3.730e-5256.32Xel-1 protein n=1 Tax=Ectocarpus siliculosus TaxID... [more]
A0A7R9UBS9_9STRA7.670e-3752.60Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A7S3HB55_9STRA4.440e-3644.74Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
I2CPF3_NANGC4.150e-3545.51Elav-like protein 2 (Fragment) n=1 Tax=Nannochloro... [more]
E2AL30_CAMFO4.220e-3542.78Sex-lethal-like protein n=5 Tax=Formicidae TaxID=3... [more]
A0A026WTV9_OOCBI6.090e-3543.02Sex-lethal-like protein n=1 Tax=Ooceraea biroi Tax... [more]
UPI0011417D489.330e-3542.79sex-lethal homolog isoform X2 n=2 Tax=Formica exse... [more]
A0A091TJS9_PHALP1.340e-3343.31ELAV-like protein (Fragment) n=1 Tax=Phaethon lept... [more]
A0A158NPV4_ATTCE1.460e-3343.26Uncharacterized protein n=9 Tax=Attini TaxID=14399... [more]
E2BWQ1_HARSA5.680e-3344.44Protein sex-lethal n=6 Tax=Harpegnathos saltator T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002343Paraneoplastic encephalomyelitis antigenPRINTSPR00961HUDSXLRNAcoord: 163..180
score: 45.19
coord: 122..134
score: 49.74
coord: 107..122
score: 33.12
coord: 73..88
score: 38.75
coord: 89..106
score: 60.74
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 103..178
e-value: 2.7E-19
score: 80.1
coord: 23..90
e-value: 9.2E-5
score: 31.8
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 34..88
e-value: 5.1E-12
score: 45.4
coord: 104..171
e-value: 1.3E-16
score: 60.1
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 35..94
score: 13.276662
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 102..182
score: 17.028851
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 31..94
e-value: 1.1E-16
score: 62.8
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 95..183
e-value: 5.2E-24
score: 86.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 349..409
NoneNo IPR availablePANTHERPTHR10352EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT Gcoord: 33..186
NoneNo IPR availablePANTHERPTHR10352:SF25FOUND IN NEURONS, ISOFORM A-RELATEDcoord: 33..186
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 34..97
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 98..204

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1617contigP-wetherbeei_contig1617:51..2106 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1617.1.7mRNA_P-wetherbeei_contig1617.1.7Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig1617 51..2551 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig1617.1.7 ID=prot_P-wetherbeei_contig1617.1.7|Name=mRNA_P-wetherbeei_contig1617.1.7|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=409bp
MKPPPLPSTFCRTARYRGSHAANRLLSLCRRRQTLFEAHGEVQHVKVVLD
RTTGKSMGYGFVKFAADEGAATAVTATNGMVIGQKRIKVSIARPSSKDIK
RSKLYVTNLPHGFGKDEVTQLFARYGTIIECRTLCDKKTGASRCTAFVQF
DRRCEAQQALQSLNGAQLAGTKRPLLVKFAEDYHRRVQQRRSPGGSSVGV
GGGIAGGSIGMMAPRGMGSLPGTPLTRPPSGHFHSGGCGSGIRSGCNGSG
GGGGADGVIFSPVMPMFSPNGGSVMGSSSLDCSAEYMHAVELAAAYSASL
QRMMPGAGAGGAPPYSPAGAGAYSPQPYSPQGFAAQAYSSQGFSPVGFPV
GGGNSGGSGGSSNGGGGGGGGSGGGGNGGGGGGSDGPGAAGFASTPPAVG
CARRTGQQP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002343Hud_Sxl_RNA
IPR000504RRM_dom
IPR012677Nucleotide-bd_a/b_plait_sf
IPR035979RBD_domain_sf