mRNA_P-wetherbeei_contig16163.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig16163.1.1 vs. uniprot
Match: A0A6I3F888_9ACTN (Peptidoglycan DD-metalloendopeptidase family protein n=3 Tax=root TaxID=1 RepID=A0A6I3F888_9ACTN) HSP 1 Score: 72.0 bits (175), Expect = 1.160e-13 Identity = 34/56 (60.71%), Postives = 42/56 (75.00%), Query Frame = 1
Query: 55 ARRLYPPGMLMFPMNVSPTCYVLNNFADPRDGGTRSHEGVDIIAKLGQAIYAVTDG 222
A+RL PP FPM V+P C +L+NF DPR GG R+HEGVDI+A LGQ +YA+ DG
Sbjct: 53 AQRLRPPAPENFPMQVTPRCMILDNFGDPRSGG-RTHEGVDIMATLGQEVYAMADG 107
BLAST of mRNA_P-wetherbeei_contig16163.1.1 vs. uniprot
Match: A0A7K1B2J3_9ACTN (Peptidoglycan DD-metalloendopeptidase family protein n=2 Tax=root TaxID=1 RepID=A0A7K1B2J3_9ACTN) HSP 1 Score: 67.4 bits (163), Expect = 6.840e-12 Identity = 41/77 (53.25%), Postives = 48/77 (62.34%), Query Frame = 1
Query: 10 AAIEAIPV--AATAQVQARRL---YPPGMLMFPMNVSPTCYVLNNFADPRDGGTRSHEGVDIIAKLGQAIYAVTDGI 225
AA IP+ AT ARRL G +MFPM SP C +L+NF D R GG R HEGVDI+A LGQ +YAV DG+
Sbjct: 38 AAAAPIPIERGATVGAPARRLGLVADAGRIMFPMGPSPRCDILDNFGDLRSGGRR-HEGVDILATLGQEVYAVADGV 113
BLAST of mRNA_P-wetherbeei_contig16163.1.1 vs. uniprot
Match: A0A3C2B1R0_9ACTN (LysM domain-containing protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A3C2B1R0_9ACTN) HSP 1 Score: 55.8 bits (133), Expect = 2.430e-7 Identity = 28/41 (68.29%), Postives = 29/41 (70.73%), Query Frame = 1
Query: 100 VSPTCYVLNNFADPRDGGTRSHEGVDIIAKLGQAIYAVTDG 222
V TCY + F PR GG RSHEGVDIIAK GQ IYA TDG
Sbjct: 135 VQGTCYFTDTFGAPRSGG-RSHEGVDIIAKSGQYIYAATDG 174
BLAST of mRNA_P-wetherbeei_contig16163.1.1 vs. uniprot
Match: A0A4R7HX62_9ACTN (Peptidase M23-like protein n=1 Tax=Ilumatobacter fluminis TaxID=467091 RepID=A0A4R7HX62_9ACTN) HSP 1 Score: 53.5 bits (127), Expect = 9.770e-7 Identity = 26/53 (49.06%), Postives = 35/53 (66.04%), Query Frame = 1
Query: 82 LMFPMNVSPTCYVLNNFAD-PRDGGTRSHEGVDIIAKLGQAIYAVTDGIVEVR 237
L+FP+ SP C VLNNF + G H+GVDI A GQ +YAV DG++E++
Sbjct: 41 LLFPIEPSPMCEVLNNFGGHSKAQGAGQHDGVDIGAMEGQEVYAVADGVLEIQ 93
BLAST of mRNA_P-wetherbeei_contig16163.1.1 vs. uniprot
Match: A0A5C6Z3D4_9FLAO (M23 family metallopeptidase n=1 Tax=Aequorivita antarctica TaxID=153266 RepID=A0A5C6Z3D4_9FLAO) HSP 1 Score: 53.5 bits (127), Expect = 2.030e-6 Identity = 23/57 (40.35%), Postives = 39/57 (68.42%), Query Frame = 1
Query: 61 RLYPPGMLMFPMNVSPTCYVLNNFADPRDGGTRSHEGVDIIAKLGQAIYAVTDGIVE 231
++Y + FP++ + + + +ADPRD G+RSHEG+DI A+ G + A+TDGI++
Sbjct: 165 KIYTEPLYAFPVSGADNKSIQSFWADPRDTGSRSHEGIDIFAERGTPVVAITDGIID 221
BLAST of mRNA_P-wetherbeei_contig16163.1.1 vs. uniprot
Match: A0A137RF70_9FLAO (Peptidase_M23 domain-containing protein n=2 Tax=Aequorivita TaxID=153265 RepID=A0A137RF70_9FLAO) HSP 1 Score: 53.1 bits (126), Expect = 2.770e-6 Identity = 25/56 (44.64%), Postives = 37/56 (66.07%), Query Frame = 1
Query: 61 RLYPPGMLMFPMNVSPTCYVLNNFADPRDGGTRSHEGVDIIAKLGQAIYAVTDGIV 228
++Y + FP++ + + + +ADPRD G+RSHEGVDI A G + AVTDGI+
Sbjct: 164 KIYTEPIYAFPVSGANNKNIQSFWADPRDAGSRSHEGVDIFANRGTPVVAVTDGII 219
BLAST of mRNA_P-wetherbeei_contig16163.1.1 vs. uniprot
Match: A0A330MHU3_9FLAO (L-Ala--D-Glu endopeptidase n=1 Tax=Aequorivita sp. CIP111184 TaxID=2211356 RepID=A0A330MHU3_9FLAO) HSP 1 Score: 53.1 bits (126), Expect = 2.770e-6 Identity = 26/56 (46.43%), Postives = 37/56 (66.07%), Query Frame = 1
Query: 61 RLYPPGMLMFPMNVSPTCYVLNNFADPRDGGTRSHEGVDIIAKLGQAIYAVTDGIV 228
++Y + FP++ + + + +ADPRD G+RSHEGVDI A G + AVTDGIV
Sbjct: 164 KIYTEPLYEFPVSGAGNKNIQSFWADPRDAGSRSHEGVDIFADRGTPVVAVTDGIV 219
BLAST of mRNA_P-wetherbeei_contig16163.1.1 vs. uniprot
Match: A0A167IV50_9FLAO (Peptidase_M23 domain-containing protein n=2 Tax=Cochleicola gelatinilyticus TaxID=1763537 RepID=A0A167IV50_9FLAO) HSP 1 Score: 53.1 bits (126), Expect = 2.790e-6 Identity = 24/45 (53.33%), Postives = 33/45 (73.33%), Query Frame = 1
Query: 88 FPMNVSPTCYVLNNFADPRDGGTRSHEGVDIIAKLGQAIYAVTDG 222
FP++ + + + +ADPRDGG+RSHEGVDI AK G + A+TDG
Sbjct: 192 FPVSGAGNKNIQSFWADPRDGGSRSHEGVDIFAKRGTPVVAITDG 236
BLAST of mRNA_P-wetherbeei_contig16163.1.1 vs. uniprot
Match: A0A7K0EYD8_9FLAO (M23 family metallopeptidase n=2 Tax=Aequorivita TaxID=153265 RepID=A0A7K0EYD8_9FLAO) HSP 1 Score: 52.8 bits (125), Expect = 3.790e-6 Identity = 24/56 (42.86%), Postives = 37/56 (66.07%), Query Frame = 1
Query: 61 RLYPPGMLMFPMNVSPTCYVLNNFADPRDGGTRSHEGVDIIAKLGQAIYAVTDGIV 228
++Y + FP++ + + + +ADPRD G+RSHEGVDI A G + AVTDG++
Sbjct: 164 KIYTEPIYAFPVSGADNKNIQSFWADPRDAGSRSHEGVDIFADRGTPVVAVTDGVI 219
BLAST of mRNA_P-wetherbeei_contig16163.1.1 vs. uniprot
Match: A0A1A9LD72_9FLAO (SH3b domain-containing protein n=2 Tax=Aequorivita soesokkakensis TaxID=1385699 RepID=A0A1A9LD72_9FLAO) HSP 1 Score: 52.0 bits (123), Expect = 7.100e-6 Identity = 23/57 (40.35%), Postives = 39/57 (68.42%), Query Frame = 1
Query: 61 RLYPPGMLMFPMNVSPTCYVLNNFADPRDGGTRSHEGVDIIAKLGQAIYAVTDGIVE 231
++Y + +FP++ + + + +ADPRD G+RSHEGVDI A G + A++DGI++
Sbjct: 165 KIYTEPLYVFPVSGGNSKNIQSFWADPRDTGSRSHEGVDIFADRGTPVIAISDGIID 221 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16163.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 24
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig16163.1.1 >prot_P-wetherbeei_contig16163.1.1 ID=prot_P-wetherbeei_contig16163.1.1|Name=mRNA_P-wetherbeei_contig16163.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=80bp AAPAAIEAIPVAATAQVQARRLYPPGMLMFPMNVSPTCYVLNNFADPRDGback to top mRNA from alignment at P-wetherbeei_contig16163:96..335- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig16163.1.1 ID=mRNA_P-wetherbeei_contig16163.1.1|Name=mRNA_P-wetherbeei_contig16163.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=240bp|location=Sequence derived from alignment at P-wetherbeei_contig16163:96..335- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig16163:96..335- >mRNA_P-wetherbeei_contig16163.1.1 ID=mRNA_P-wetherbeei_contig16163.1.1|Name=mRNA_P-wetherbeei_contig16163.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=240bp|location=Sequence derived from alignment at P-wetherbeei_contig16163:96..335- (Phaeothamnion wetherbeei SAG_119_79)back to top |