mRNA_P-wetherbeei_contig16142.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig16142.2.1
Unique NamemRNA_P-wetherbeei_contig16142.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig16142.2.1 vs. uniprot
Match: A0A6N8B4N7_9FIRM (50S ribosomal protein L2 n=1 Tax=Firmicutes bacterium TaxID=1879010 RepID=A0A6N8B4N7_9FIRM)

HSP 1 Score: 399 bits (1026), Expect = 2.420e-138
Identity = 194/274 (70.80%), Postives = 226/274 (82.48%), Query Frame = 1
Query:    1 MAIRNYKPTSPGRRFMSGATFAEITTDEPEKSLLEPLKKTAGRNAQGRVTSRHRGGGHKRHYRVIDWRRDKDDVPAKVASIEYDPNRSAYICLVHYRDGEKRYILAAEGLNVGDVIVSGEASDIKTGNCLPLRKMPIGTLVHNVELYPGRGGQMVRSAGASAQLMAKEGQRALLRLPSGEVRQVSHDCRATVGLVGNSDHENLRVGKAGKSRWLGIRPQTRGVSMNPCDHPHGGGEARSTPGRPSSTPWGKPAIGYKTRKKKASDIMIQRRRKK 822
            MAI+ +KPTSPGRRF++ + FAE+T  EPEKSLL PLKKTAGRN QGR+T RHRGGGHKR YR+ID++R+KD VPAKVAS+EYDPNRSAYI L+HY DGEKRYI+A +G+ VG  + SG  +DIK GN LPL  +P+GTL+HN+ELYPGRGGQMVRSAGASAQLMAKEG+ A +R+PSGE+R V   CRATVG VGN +HEN+ VGKAG+ RWLG RP  RGV MNP DHPHGGGE RS  GR   TPWGKPAIG +TRKKK SD +I +RRKK
Sbjct:    1 MAIKKFKPTSPGRRFVTVSDFAEVTKTEPEKSLLAPLKKTAGRNNQGRLTVRHRGGGHKRMYRIIDFKRNKDGVPAKVASLEYDPNRSAYIALLHYADGEKRYIIAPKGVTVGTYVESGPEADIKVGNALPLTNIPVGTLIHNIELYPGRGGQMVRSAGASAQLMAKEGKYATIRMPSGEMRMVLQTCRATVGQVGNVEHENITVGKAGRQRWLGKRPTVRGVVMNPVDHPHGGGEGRSPVGRHPVTPWGKPAIGARTRKKKPSDKLIIKRRKK 274          
BLAST of mRNA_P-wetherbeei_contig16142.2.1 vs. uniprot
Match: A0A7X8XY82_9BURK (50S ribosomal protein L2 n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=A0A7X8XY82_9BURK)

HSP 1 Score: 399 bits (1024), Expect = 5.060e-138
Identity = 190/273 (69.60%), Postives = 223/273 (81.68%), Query Frame = 1
Query:    1 MAIRNYKPTSPGRRFMSGATFAEITTDEPEKSLLEPLKKTAGRNAQGRVTSRHRGGGHKRHYRVIDWRRDKDDVPAKVASIEYDPNRSAYICLVHYRDGEKRYILAAEGLNVGDVIVSGEASDIKTGNCLPLRKMPIGTLVHNVELYPGRGGQMVRSAGASAQLMAKEGQRALLRLPSGEVRQVSHDCRATVGLVGNSDHENLRVGKAGKSRWLGIRPQTRGVSMNPCDHPHGGGEARSTPGRPSSTPWGKPAIGYKTRKKKASDIMIQRRRK 819
            M++R YKP+SPGRRFMS    + ++  EPE SLL PL K+ GRN+ GRVTSRHRGGGHKR YR+IDW+R+KD VPAKVA+IEYDPNRSA+I L+HY DGEKRYIL+  GL VGD ++SGE  DIK GN +PL  MP+GT++HNVELYPG G QM RSAG++AQLMAKEG+ A +RLPS EVR V   CRATVG VGN +HEN+ +GKAG+SRWLG RP+ RGV+ NPCDHPHGGGEAR+TPGRPS+TPWGKP  G KTRKKK  D MI RRRK
Sbjct:    1 MSVRPYKPSSPGRRFMSVQDTSVLSKVEPEASLLAPLSKSGGRNSTGRVTSRHRGGGHKRKYRIIDWKRNKDGVPAKVATIEYDPNRSAHISLLHYADGEKRYILSVRGLAVGDTVISGEGQDIKPGNAMPLSNMPVGTVIHNVELYPGHGAQMARSAGSAAQLMAKEGKVAYIRLPSSEVRLVPITCRATVGQVGNHEHENITIGKAGRSRWLGRRPRIRGVATNPCDHPHGGGEARATPGRPSTTPWGKPTYGLKTRKKKPGDKMIVRRRK 273          
BLAST of mRNA_P-wetherbeei_contig16142.2.1 vs. uniprot
Match: A0A7C6S7D1_9FIRM (50S ribosomal protein L2 n=3 Tax=Firmicutes bacterium TaxID=1879010 RepID=A0A7C6S7D1_9FIRM)

HSP 1 Score: 395 bits (1015), Expect = 1.140e-136
Identity = 193/274 (70.44%), Postives = 225/274 (82.12%), Query Frame = 1
Query:    1 MAIRNYKPTSPGRRFMSGATFAEITTDEPEKSLLEPLKKTAGRNAQGRVTSRHRGGGHKRHYRVIDWRRDKDDVPAKVASIEYDPNRSAYICLVHYRDGEKRYILAAEGLNVGDVIVSGEASDIKTGNCLPLRKMPIGTLVHNVELYPGRGGQMVRSAGASAQLMAKEGQRALLRLPSGEVRQVSHDCRATVGLVGNSDHENLRVGKAGKSRWLGIRPQTRGVSMNPCDHPHGGGEARSTPGRPSSTPWGKPAIGYKTRKKKASDIMIQRRRKK 822
            MA++ +KPTSPGRRFM+ +TF EIT  EPEKSLL PLKKT GRNAQGR+T RH+GGGHKR YR+ID+RRDKD VPA+VASIEYDPNRSA I L+HY DGEKRYILA  GL VG V+ SG  +DIK GNCLPL+ +P+GT++HN+EL PG+GGQMVRSAGASAQLMAKEG  A +RLPSGEVR V   CRAT+G VGN +HEN+ +GKAG++RW GIRP  RGV MNP DHPHGGGE +S  GR   TPWGKP +G +TRKKKASD +I +RR K
Sbjct:    1 MAVKKFKPTSPGRRFMTVSTFEEITKKEPEKSLLVPLKKTGGRNAQGRMTVRHQGGGHKRMYRLIDFRRDKDGVPARVASIEYDPNRSARIALLHYADGEKRYILAPVGLEVGSVVESGPDADIKVGNCLPLQDIPLGTMIHNIELQPGKGGQMVRSAGASAQLMAKEGNYAHIRLPSGEVRLVHSRCRATIGQVGNVEHENITLGKAGRARWKGIRPAVRGVVMNPADHPHGGGEGKSPIGRHPVTPWGKPTLGARTRKKKASDRLIVKRRAK 274          
BLAST of mRNA_P-wetherbeei_contig16142.2.1 vs. uniprot
Match: A0A124FDU9_9THEO (50S ribosomal protein L2 n=4 Tax=Clostridia TaxID=186801 RepID=A0A124FDU9_9THEO)

HSP 1 Score: 394 bits (1013), Expect = 2.300e-136
Identity = 196/274 (71.53%), Postives = 224/274 (81.75%), Query Frame = 1
Query:    1 MAIRNYKPTSPGRRFMSGATFAEITTDEPEKSLLEPLKKTAGRNAQGRVTSRHRGGGHKRHYRVIDWRRDKDDVPAKVASIEYDPNRSAYICLVHYRDGEKRYILAAEGLNVGDVIVSGEASDIKTGNCLPLRKMPIGTLVHNVELYPGRGGQMVRSAGASAQLMAKEGQRALLRLPSGEVRQVSHDCRATVGLVGNSDHENLRVGKAGKSRWLGIRPQTRGVSMNPCDHPHGGGEARSTPGRPSSTPWGKPAIGYKTRKK-KASDIMIQRRRK 819
            MAI+ +KPTSPGRR M+ +TFAEIT  EPEKSLL PL K+ GRN QGR+T RHRGGGHKR YR+ID++RDKD +P +VA+IEYDPNRSA I L+HY DGEKRYILA E L VGDVI SG  +DIK GN LPLR +P+GTLVHNVEL PGRGGQMVRSAGA+AQ+MAKEG  A LRLPSGE+R V  +CRAT+G VGN DHEN+ +GKAG+SRWLGIRP  RGV MNP DHPHGGGE +S  GR   TPWGKPA+G KTRKK K SD +I +RRK
Sbjct:    1 MAIKKFKPTSPGRRQMTVSTFAEITATEPEKSLLAPLTKSGGRNNQGRITVRHRGGGHKRLYRLIDFKRDKDGIPGRVATIEYDPNRSANIALIHYADGEKRYILAPENLKVGDVIYSGPQADIKVGNALPLRNIPVGTLVHNVELKPGRGGQMVRSAGAAAQVMAKEGDYAQLRLPSGEIRMVHLNCRATIGQVGNLDHENITIGKAGRSRWLGIRPTVRGVVMNPVDHPHGGGEGKSPIGRHPVTPWGKPALGVKTRKKHKPSDKLIVKRRK 274          
BLAST of mRNA_P-wetherbeei_contig16142.2.1 vs. uniprot
Match: UPI000835DB90 (50S ribosomal protein L2 n=1 Tax=Desulfolucianica intricata TaxID=1285191 RepID=UPI000835DB90)

HSP 1 Score: 393 bits (1010), Expect = 6.830e-136
Identity = 186/272 (68.38%), Postives = 226/272 (83.09%), Query Frame = 1
Query:    1 MAIRNYKPTSPGRRFMSGATFAEITTDEPEKSLLEPLKKTAGRNAQGRVTSRHRGGGHKRHYRVIDWRRDKDDVPAKVASIEYDPNRSAYICLVHYRDGEKRYILAAEGLNVGDVIVSGEASDIKTGNCLPLRKMPIGTLVHNVELYPGRGGQMVRSAGASAQLMAKEGQRALLRLPSGEVRQVSHDCRATVGLVGNSDHENLRVGKAGKSRWLGIRPQTRGVSMNPCDHPHGGGEARSTPGRPSSTPWGKPAIGYKTRKKKASDIMIQRRR 816
            MA++N+KPTSPGRRF++ + F E+TTD+PEKSLL PLKKT GRNAQGR+T RHRGGGHKR YR+ID++RDKD +PAKVA+IEYDPNRSA I L++Y DGEKRYI+A  GL VGD I+SG  +DIK GN LPLR +P+GT++HN+ELYPG GGQ+VRSAG +AQLMAKEG+ A +R+PSGE+R     CRAT+G VGN +HEN+ +GKAG+SRWLGIRP  RGV MNP DHPHGGGE RS  GR   TPWGKPA+G +TRK+K SD +I +RR
Sbjct:    1 MAVKNFKPTSPGRRFVTVSNFEELTTDKPEKSLLAPLKKTGGRNAQGRLTVRHRGGGHKRMYRIIDFKRDKDGIPAKVATIEYDPNRSARIALLNYVDGEKRYIIAPVGLKVGDTIMSGPDADIKVGNALPLRNIPVGTMIHNIELYPGHGGQLVRSAGTAAQLMAKEGKYANVRMPSGEMRLFLQSCRATIGQVGNLEHENITIGKAGRSRWLGIRPTVRGVVMNPVDHPHGGGEGRSPVGRNPVTPWGKPALGARTRKRKPSDRLIVKRR 272          
BLAST of mRNA_P-wetherbeei_contig16142.2.1 vs. uniprot
Match: UPI000368BC6B (50S ribosomal protein L2 n=1 Tax=Desulfurispora thermophila TaxID=265470 RepID=UPI000368BC6B)

HSP 1 Score: 393 bits (1009), Expect = 9.360e-136
Identity = 188/272 (69.12%), Postives = 224/272 (82.35%), Query Frame = 1
Query:    1 MAIRNYKPTSPGRRFMSGATFAEITTDEPEKSLLEPLKKTAGRNAQGRVTSRHRGGGHKRHYRVIDWRRDKDDVPAKVASIEYDPNRSAYICLVHYRDGEKRYILAAEGLNVGDVIVSGEASDIKTGNCLPLRKMPIGTLVHNVELYPGRGGQMVRSAGASAQLMAKEGQRALLRLPSGEVRQVSHDCRATVGLVGNSDHENLRVGKAGKSRWLGIRPQTRGVSMNPCDHPHGGGEARSTPGRPSSTPWGKPAIGYKTRKKKASDIMIQRRR 816
            M +++YKPTSPGRRF++ +TF EITTD+PEKSLL PLKKT GRN QGR+T RHRGGG KR YRVID++RDKD +PAKVA+IEYDPNRSA I L+HY DGEKRYI+A  GL VG  +VSG  +DIK GNCLPLR +P+GT++HN+ELYP  GG++VRSAG +AQLMAKEG+ A +R+PSGE+R V  DCRAT+G VGN DHEN+ +GKAG+SRWLG RP  RGV MNP DHPHGGGE RS  GR   TPWGKPA+G +TRKKK SD +I +RR
Sbjct:    1 MPVKSYKPTSPGRRFVTVSTFEEITTDQPEKSLLRPLKKTGGRNNQGRITVRHRGGGAKRMYRVIDFKRDKDGIPAKVATIEYDPNRSARIALLHYADGEKRYIIAPHGLQVGMTVVSGPDADIKVGNCLPLRNIPLGTMIHNIELYPKGGGKLVRSAGTAAQLMAKEGKYAHIRMPSGEMRLVLQDCRATIGQVGNIDHENITIGKAGRSRWLGRRPTVRGVVMNPVDHPHGGGEGRSPIGRNPVTPWGKPALGARTRKKKPSDRLIVKRR 272          
BLAST of mRNA_P-wetherbeei_contig16142.2.1 vs. uniprot
Match: RL2_PELTS (50S ribosomal protein L2 n=5 Tax=Eubacteriales TaxID=186802 RepID=RL2_PELTS)

HSP 1 Score: 392 bits (1006), Expect = 2.680e-135
Identity = 185/272 (68.01%), Postives = 224/272 (82.35%), Query Frame = 1
Query:    1 MAIRNYKPTSPGRRFMSGATFAEITTDEPEKSLLEPLKKTAGRNAQGRVTSRHRGGGHKRHYRVIDWRRDKDDVPAKVASIEYDPNRSAYICLVHYRDGEKRYILAAEGLNVGDVIVSGEASDIKTGNCLPLRKMPIGTLVHNVELYPGRGGQMVRSAGASAQLMAKEGQRALLRLPSGEVRQVSHDCRATVGLVGNSDHENLRVGKAGKSRWLGIRPQTRGVSMNPCDHPHGGGEARSTPGRPSSTPWGKPAIGYKTRKKKASDIMIQRRR 816
            MAI+ +KPTSPGRRF++ + F EIT  EPEKSL+EPLKK+ GRNAQGR+T RHRGGGHKR YR+ID++RDKD +PAKVASIEYDPNRSA I L+HY DGEKRYI+A  GL VG  +VSG  +DIK GNCLPL+ +P+GT++HN+ELYP  GG++VRSAGASAQLMAKEG+ A +R+PSGE+R +  +CRAT+G VGN +HEN+ +GKAG+ RWLGIRP  RGV MNP DHPHGGGE RS  GR   TPWGKPA+G +TRKKK  D +I +RR
Sbjct:    1 MAIKKFKPTSPGRRFVTVSDFEEITRTEPEKSLVEPLKKSGGRNAQGRITVRHRGGGHKRLYRIIDFKRDKDGIPAKVASIEYDPNRSARIALLHYADGEKRYIIAPAGLEVGQTVVSGPDADIKAGNCLPLKNIPVGTMIHNIELYPNGGGKLVRSAGASAQLMAKEGKYANIRMPSGEMRLLLQECRATIGQVGNVEHENITIGKAGRKRWLGIRPTVRGVVMNPVDHPHGGGEGRSPIGRNPVTPWGKPALGARTRKKKPGDRLIVKRR 272          
BLAST of mRNA_P-wetherbeei_contig16142.2.1 vs. uniprot
Match: A0A1V5P134_9FIRM (50S ribosomal protein L2 n=1 Tax=Firmicutes bacterium ADurb.Bin373 TaxID=1852891 RepID=A0A1V5P134_9FIRM)

HSP 1 Score: 392 bits (1006), Expect = 2.680e-135
Identity = 188/274 (68.61%), Postives = 225/274 (82.12%), Query Frame = 1
Query:    1 MAIRNYKPTSPGRRFMSGATFAEITTDEPEKSLLEPLKKTAGRNAQGRVTSRHRGGGHKRHYRVIDWRRDKDDVPAKVASIEYDPNRSAYICLVHYRDGEKRYILAAEGLNVGDVIVSGEASDIKTGNCLPLRKMPIGTLVHNVELYPGRGGQMVRSAGASAQLMAKEGQRALLRLPSGEVRQVSHDCRATVGLVGNSDHENLRVGKAGKSRWLGIRPQTRGVSMNPCDHPHGGGEARSTPGRPSSTPWGKPAIGYKTRKKKASDIMIQRRRKK 822
            MAI+ +KPTSPGRRF++ + FAEIT  EPEKSL+EPLKKT GRN QG++T RHRGGGHKR YR+ID++RDKDDVPAKVASIEYDPNRS+ I L++Y DGEKRYI+A  GL VG  ++SG  +DIK GNCLPL+ +P+GT++HN+ELYP  G +MVRSAG SAQLMAKEG+ A +R+PSGE+R V  DCRAT+G VGN +HEN+ +GKAG+ RWLGIRP  RGV MNP DHPHGGGE RS  GR   TPWGKPA+G +TRKKK SD MI +RR K
Sbjct:    1 MAIKKFKPTSPGRRFVTVSDFAEITKKEPEKSLVEPLKKTGGRNKQGKMTVRHRGGGHKRMYRIIDFKRDKDDVPAKVASIEYDPNRSSRIALLNYADGEKRYIIAPVGLKVGQTVLSGPKADIKAGNCLPLKNIPLGTIIHNIELYPKGGAKMVRSAGGSAQLMAKEGKYANIRMPSGEMRLVLQDCRATIGQVGNVEHENITIGKAGRKRWLGIRPTVRGVVMNPVDHPHGGGEGRSPIGRNPVTPWGKPALGARTRKKKPSDRMIIKRRTK 274          
BLAST of mRNA_P-wetherbeei_contig16142.2.1 vs. uniprot
Match: A0A7X8HP77_9FIRM (50S ribosomal protein L2 n=1 Tax=Peptococcaceae bacterium TaxID=2052179 RepID=A0A7X8HP77_9FIRM)

HSP 1 Score: 392 bits (1006), Expect = 2.680e-135
Identity = 188/274 (68.61%), Postives = 224/274 (81.75%), Query Frame = 1
Query:    1 MAIRNYKPTSPGRRFMSGATFAEITTDEPEKSLLEPLKKTAGRNAQGRVTSRHRGGGHKRHYRVIDWRRDKDDVPAKVASIEYDPNRSAYICLVHYRDGEKRYILAAEGLNVGDVIVSGEASDIKTGNCLPLRKMPIGTLVHNVELYPGRGGQMVRSAGASAQLMAKEGQRALLRLPSGEVRQVSHDCRATVGLVGNSDHENLRVGKAGKSRWLGIRPQTRGVSMNPCDHPHGGGEARSTPGRPSSTPWGKPAIGYKTRKKKASDIMIQRRRKK 822
            MAI+ +KPTSPGRRF++ A FAEIT  EPEKSL++PLK + GRN+QGR T RHRGGGHKR YRVID++RDKD +PAKVASIEYDPNRS++I L+HY DGEKRYI A  GL VG +++SG  +DIK GNCLPLR +P+GT++HN+ELYP  G +MVR+AG SAQLMAKEG+ A +R+PSGE+R V  DCRAT+G VGN +HEN+ +GKAG+ RWLG RP  RGV MNP DHPHGGGE RS  GR   TPWGKPA+G +TRKKK SD MI RRRKK
Sbjct:    1 MAIKKFKPTSPGRRFVTVADFAEITKKEPEKSLVKPLKGSGGRNSQGRTTVRHRGGGHKRAYRVIDFKRDKDGIPAKVASIEYDPNRSSHIALLHYVDGEKRYITAPVGLKVGQMVLSGPQADIKVGNCLPLRNIPLGTMIHNIELYPKGGAKMVRAAGGSAQLMAKEGKYANIRMPSGEIRLVLQDCRATIGQVGNVEHENIAIGKAGRKRWLGFRPSVRGVVMNPVDHPHGGGEGRSPIGRNPVTPWGKPALGARTRKKKPSDQMIIRRRKK 274          
BLAST of mRNA_P-wetherbeei_contig16142.2.1 vs. uniprot
Match: A0A7C2E2M8_9THEO (50S ribosomal protein L2 n=2 Tax=Ammonifex degensii TaxID=42838 RepID=A0A7C2E2M8_9THEO)

HSP 1 Score: 392 bits (1006), Expect = 2.780e-135
Identity = 187/275 (68.00%), Postives = 227/275 (82.55%), Query Frame = 1
Query:    1 MAIRNYKPTSPGRRFMSGATFAEITTDEPEKSLLEPLKKTAGRNAQGRVTSRHRGGGHKRHYRVIDWRRDKDDVPAKVASIEYDPNRSAYICLVHYRDGEKRYILAAEGLNVGDVIVSGEASDIKTGNCLPLRKMPIGTLVHNVELYPGRGGQMVRSAGASAQLMAKEGQRALLRLPSGEVRQVSHDCRATVGLVGNSDHENLRVGKAGKSRWLGIRPQTRGVSMNPCDHPHGGGEARSTPGRPSS-TPWGKPAIGYKTRKKKASDIMIQRRRKK 822
            M ++ YKPTSPGRRF++GATF EIT  EPE+SLL+PLK+  GRN QGR+T RHRGGGHKR YRVID++RDKD VPAKVA+IEYDPNRSA I L+HYRDGEKRYILA  GL VG V+VSG  +DIK GN LPLR +P+GT++HN+E+ PG GG++VRSAG +AQLMAKEG  A +R+PSGEVR +  DCRAT+G VG+ +HEN+ +GKAG++RW+GIRP  RGV MNP DHPHGGGE RS  GR +  TPWGKPA+G +TRK+KASD +I +RR K
Sbjct:    1 MPVKKYKPTSPGRRFVTGATFEEITATEPERSLLKPLKRRGGRNNQGRITVRHRGGGHKRFYRVIDFKRDKDGVPAKVATIEYDPNRSARIALLHYRDGEKRYILAPAGLEVGQVVVSGPDADIKVGNALPLRNIPVGTMIHNMEINPGEGGKLVRSAGTAAQLMAKEGDYAHIRMPSGEVRLIHLDCRATIGQVGHEEHENITIGKAGRARWMGIRPTVRGVVMNPVDHPHGGGEGRSPIGRKTPVTPWGKPALGVRTRKRKASDRLILKRRHK 275          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16142.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6N8B4N7_9FIRM2.420e-13870.8050S ribosomal protein L2 n=1 Tax=Firmicutes bacter... [more]
A0A7X8XY82_9BURK5.060e-13869.6050S ribosomal protein L2 n=1 Tax=Burkholderiales b... [more]
A0A7C6S7D1_9FIRM1.140e-13670.4450S ribosomal protein L2 n=3 Tax=Firmicutes bacter... [more]
A0A124FDU9_9THEO2.300e-13671.5350S ribosomal protein L2 n=4 Tax=Clostridia TaxID=... [more]
UPI000835DB906.830e-13668.3850S ribosomal protein L2 n=1 Tax=Desulfolucianica ... [more]
UPI000368BC6B9.360e-13669.1250S ribosomal protein L2 n=1 Tax=Desulfurispora th... [more]
RL2_PELTS2.680e-13568.0150S ribosomal protein L2 n=5 Tax=Eubacteriales Tax... [more]
A0A1V5P134_9FIRM2.680e-13568.6150S ribosomal protein L2 n=1 Tax=Firmicutes bacter... [more]
A0A7X8HP77_9FIRM2.680e-13568.6150S ribosomal protein L2 n=1 Tax=Peptococcaceae ba... [more]
A0A7C2E2M8_9THEO2.780e-13568.0050S ribosomal protein L2 n=2 Tax=Ammonifex degensi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig16142contigP-wetherbeei_contig16142:554..1378 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog370438.PTH_0323
Preferred namerplB
PFAMsRibosomal_L2,Ribosomal_L2_C
Model size825
Max annot lvl186801|Clostridia
KEGG koko:K02886
KEGG Pathwayko03010,map03010
KEGG ModuleM00178,M00179
Hectar predicted targeting categoryother localisation
Exons1
Evalue4.39e-136
EggNOG OGsCOG0090@1|root,COG0090@2|Bacteria,1TP9X@1239|Firmicutes,247XY@186801|Clostridia,260NI@186807|Peptococcaceae
DescriptionOne of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
Cds size825
COG categoryJ
BRITEbr01610,ko00000,ko00001,ko00002,ko03011
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186078.415785-CDS-P-wetherbeei_contig16142:553..13781683186078.415785-CDS-P-wetherbeei_contig16142:553..1378Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig16142 554..1378 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig16142.2.1prot_P-wetherbeei_contig16142.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig16142 554..1378 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig16142.2.1

>prot_P-wetherbeei_contig16142.2.1 ID=prot_P-wetherbeei_contig16142.2.1|Name=mRNA_P-wetherbeei_contig16142.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=275bp
MAIRNYKPTSPGRRFMSGATFAEITTDEPEKSLLEPLKKTAGRNAQGRVT
SRHRGGGHKRHYRVIDWRRDKDDVPAKVASIEYDPNRSAYICLVHYRDGE
KRYILAAEGLNVGDVIVSGEASDIKTGNCLPLRKMPIGTLVHNVELYPGR
GGQMVRSAGASAQLMAKEGQRALLRLPSGEVRQVSHDCRATVGLVGNSDH
ENLRVGKAGKSRWLGIRPQTRGVSMNPCDHPHGGGEARSTPGRPSSTPWG
KPAIGYKTRKKKASDIMIQRRRKK*
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mRNA from alignment at P-wetherbeei_contig16142:554..1378+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig16142.2.1 ID=mRNA_P-wetherbeei_contig16142.2.1|Name=mRNA_P-wetherbeei_contig16142.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=825bp|location=Sequence derived from alignment at P-wetherbeei_contig16142:554..1378+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGCCATCCGGAACTATAAACCGACCAGTCCCGGGCGTCGTTTTATGAG TGGGGCAACGTTTGCCGAAATCACCACTGACGAGCCAGAAAAAAGTCTCC TTGAGCCGCTCAAGAAGACCGCCGGCCGTAACGCGCAGGGTCGAGTCACT TCACGCCATCGTGGAGGTGGCCACAAGCGCCACTACCGTGTAATTGACTG GAGACGCGACAAGGACGACGTTCCTGCAAAAGTTGCTTCCATTGAGTATG ACCCCAACCGCAGCGCTTACATCTGCCTGGTTCACTACCGTGATGGTGAA AAGCGCTACATTCTGGCTGCAGAGGGACTGAACGTCGGTGACGTTATCGT CTCTGGCGAAGCCTCTGACATCAAGACCGGCAACTGTCTACCGCTGCGCA AGATGCCCATCGGCACGCTCGTGCACAACGTAGAGCTGTATCCCGGTCGC GGTGGTCAGATGGTTCGCTCGGCTGGCGCTTCGGCCCAGCTGATGGCTAA AGAAGGCCAGCGCGCTCTTCTTCGCCTCCCGTCTGGCGAAGTTCGCCAGG TCTCGCATGACTGCCGCGCCACTGTTGGCCTGGTAGGCAATAGCGACCAC GAAAACCTGCGAGTCGGCAAAGCCGGCAAATCGCGCTGGTTGGGAATCCG CCCGCAGACGCGCGGCGTTTCCATGAACCCGTGCGACCATCCGCACGGTG GTGGTGAGGCTCGCTCGACGCCGGGTCGTCCTAGCAGCACTCCTTGGGGT AAACCGGCTATCGGTTACAAGACCCGTAAGAAGAAAGCTAGCGACATCAT GATTCAGCGGCGTCGCAAGAAGTAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig16142:554..1378+

>mRNA_P-wetherbeei_contig16142.2.1 ID=mRNA_P-wetherbeei_contig16142.2.1|Name=mRNA_P-wetherbeei_contig16142.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=825bp|location=Sequence derived from alignment at P-wetherbeei_contig16142:554..1378+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGCCATCCGGAACTATAAACCGACCAGTCCCGGGCGTCGTTTTATGAG
TGGGGCAACGTTTGCCGAAATCACCACTGACGAGCCAGAAAAAAGTCTCC
TTGAGCCGCTCAAGAAGACCGCCGGCCGTAACGCGCAGGGTCGAGTCACT
TCACGCCATCGTGGAGGTGGCCACAAGCGCCACTACCGTGTAATTGACTG
GAGACGCGACAAGGACGACGTTCCTGCAAAAGTTGCTTCCATTGAGTATG
ACCCCAACCGCAGCGCTTACATCTGCCTGGTTCACTACCGTGATGGTGAA
AAGCGCTACATTCTGGCTGCAGAGGGACTGAACGTCGGTGACGTTATCGT
CTCTGGCGAAGCCTCTGACATCAAGACCGGCAACTGTCTACCGCTGCGCA
AGATGCCCATCGGCACGCTCGTGCACAACGTAGAGCTGTATCCCGGTCGC
GGTGGTCAGATGGTTCGCTCGGCTGGCGCTTCGGCCCAGCTGATGGCTAA
AGAAGGCCAGCGCGCTCTTCTTCGCCTCCCGTCTGGCGAAGTTCGCCAGG
TCTCGCATGACTGCCGCGCCACTGTTGGCCTGGTAGGCAATAGCGACCAC
GAAAACCTGCGAGTCGGCAAAGCCGGCAAATCGCGCTGGTTGGGAATCCG
CCCGCAGACGCGCGGCGTTTCCATGAACCCGTGCGACCATCCGCACGGTG
GTGGTGAGGCTCGCTCGACGCCGGGTCGTCCTAGCAGCACTCCTTGGGGT
AAACCGGCTATCGGTTACAAGACCCGTAAGAAGAAAGCTAGCGACATCAT
GATTCAGCGGCGTCGCAAGAAGTAG
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