mRNA_P-wetherbeei_contig1610.5.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1610.5.2 vs. uniprot
Match: D7FXM7_ECTSI (Coatomer subunit epsilon n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXM7_ECTSI) HSP 1 Score: 280 bits (717), Expect = 1.480e-82 Identity = 161/352 (45.74%), Postives = 193/352 (54.83%), Query Frame = 2
Query: 470 QVKSDAPVALQAVKLLAQYLRQPEAREMVLITLGEWLADPASGNNPTLQLAAASIYLHEDNVRDAIRAVRNGVTMEQVTVEA*KFDRGSRVLSATKALRPVRLGHFRNCLSADHYDPCSRLHTLIFHSNSIRRRLRGLPFIAASSMSAAAADTXXXXXXXXXXXXXXXXXAPAMRAAFSATGHDGFAAFSRRRTQVALLAHIYLRMDRVDLAQKQLRVMHAADEDAALTQLTTAWVHVATGGKHYREAAYIFDELIDKHQGSPLLLNGLAIAKMHMGEFNEAESALVEAASKSQGDADTLINLICCYRHLDKPASFIDRYSAQLRAAHPAHPYVVGLNNVESAFARVAATFA 1525
++K DAP ALQAV+L+AQYL PE+RE+V+ TL WL DP S NNPT+QL AA+++ HE ++++A+R++RNGVTMEQ A+LA IYLRMDRVDLA KQ++V+ AD+DA LTQL AWVH+A GGK Y+EAAYIFDELIDK+Q SPLLLN A+AKMHMGE+ EAE+ LVEA SKSQ DADTL+NLIC RHLDKPASF+DRY QL+ AHP HPYV L N ESAF RVAATFA
Sbjct: 60 EIKDDAPPALQAVRLMAQYLSNPESREIVIETLKMWLTDPGSCNNPTVQLLAAAVFTHEGDLKEAVRSIRNGVTMEQT----------------------------------------------------------------------------------------------------------------------AMLAQIYLRMDRVDLALKQVQVLQQADDDATLTQLVVAWVHLAQGGKRYQEAAYIFDELIDKYQASPLLLNSSAVAKMHMGEYQEAETILVEAISKSQNDADTLVNLICVCRHLDKPASFVDRYINQLKTAHPQHPYVQSLANAESAFDRVAATFA 293
BLAST of mRNA_P-wetherbeei_contig1610.5.2 vs. uniprot
Match: A0A836CM75_9STRA (Coatomer subunit epsilon n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM75_9STRA) HSP 1 Score: 236 bits (602), Expect = 1.640e-66 Identity = 149/353 (42.21%), Postives = 179/353 (50.71%), Query Frame = 2
Query: 473 VKSDAPVALQAVKLLAQYLRQPEAREMVLITLGEWLADPASGNNPTLQLAAASIYLHEDNVRDAIRAVRNGVTMEQVTVEA*KFDRGSRVLSATKALRPVRLGHFRNCLSADHYDPCSRLHTLIFHSNSIRRRLRGLPFIAASSMSAAAADTXXXXXXXXXXXXXXXXXAPAMRAAFSATGHDGFAAFSRRRTQVALLAHIYLRMDRVDLAQKQLRVMHAADEDAALTQLTTAWVHVATGG-KHYREAAYIFDELIDKHQGSPLLLNGLAIAKMHMGEFNEAESALVEAASK-SQGDADTLINLICCYRHLDKPASFIDRYSAQLRAAHPAHPYVVGLNNVESAFARVAATFA 1525
V AP +LQA KLLA Y QPE R+MVL+TLGEWL DP+SG+NPTLQL AA IY EDN+++AIRA+RNGVTMEQ ALLA IYLRMDR+DLA KQ R+M ADED+ LT + AWV +A G K +EAAY+FDELIDK+Q SPLLLNG+A+AKMHMGE+ EAE+ L+EAA K G ADTL+NL+ C RHLDKP S +Y QL+ +P H Y V L N ESAF+RV+ + A
Sbjct: 62 VSDSAPTSLQACKLLATYEAQPENRDMVLLTLGEWLDDPSSGHNPTLQLLAADIYCREDNLKEAIRAIRNGVTMEQT----------------------------------------------------------------------------------------------------------------------ALLAQIYLRMDRLDLALKQHRIMQEADEDSTLTHMVGAWVCLAAGTTKKAQEAAYVFDELIDKYQASPLLLNGVAVAKMHMGEWGEAEANLLEAAGKPGGGGADTLVNLVTCCRHLDKPESQAQQYLEQLKEKYPNHAYTVTLRNAESAFSRVSDSLA 296
BLAST of mRNA_P-wetherbeei_contig1610.5.2 vs. uniprot
Match: A0A7S2F9R0_9STRA (Coatomer subunit epsilon n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2F9R0_9STRA) HSP 1 Score: 219 bits (558), Expect = 1.620e-60 Identity = 133/346 (38.44%), Postives = 171/346 (49.42%), Query Frame = 2
Query: 488 PVALQAVKLLAQYLRQPEAREMVLITLGEWLADPASGNNPTLQLAAASIYLHEDNVRDAIRAVRNGVTMEQVTVEA*KFDRGSRVLSATKALRPVRLGHFRNCLSADHYDPCSRLHTLIFHSNSIRRRLRGLPFIAASSMSAAAADTXXXXXXXXXXXXXXXXXAPAMRAAFSATGHDGFAAFSRRRTQVALLAHIYLRMDRVDLAQKQLRVMHAADEDAALTQLTTAWVHVATGGKHYREAAYIFDELIDKHQGSPLLLNGLAIAKMHMGEFNEAESALVEAASKSQGDADTLINLICCYRHLDKPASFIDRYSAQLRAAHPAHPYVVGLNNVESAFARVAATFA 1525
PV+LQAVKLLA+YL P ++E+VL+TLGEWLADP S N +LQL AA IY+HE+N +DA++ +R+G TMEQ+ AL IYL+MDR DLA KQ+R+M ADEDA LTQL+ AW ++ATGGK +EAA+I++ELIDK + LLNG+A+A MHMG+F+EAE L A + D DTL+NLI CY+HL KP+ I R+ QLR+ P +P V LN VE AF RVA T+A
Sbjct: 68 PVSLQAVKLLARYLSDPSSKELVLMTLGEWLADPGSAGNSSLQLIAAVIYMHENNTKDALKTIRHGTTMEQL----------------------------------------------------------------------------------------------------------------------ALNIQIYLKMDRPDLATKQVRLMQQADEDATLTQLSLAWTYLATGGKKLQEAAFIYEELIDKFGPTTSLLNGVAVANMHMGKFDEAEKTLQNALQQGPNDPDTLVNLISCYQHLSKPSELIQRHINQLRSGAPNNPMVQQLNTVEGAFDRVAGTYA 295
BLAST of mRNA_P-wetherbeei_contig1610.5.2 vs. uniprot
Match: A0A7S2XUN8_9STRA (Coatomer subunit epsilon n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XUN8_9STRA) HSP 1 Score: 203 bits (516), Expect = 6.710e-55 Identity = 126/353 (35.69%), Postives = 168/353 (47.59%), Query Frame = 2
Query: 467 TQVKSDAPVALQAVKLLAQYLRQPEAREMVLITLGEWLADPASGNNPTLQLAAASIYLHEDNVRDAIRAVRNGVTMEQVTVEA*KFDRGSRVLSATKALRPVRLGHFRNCLSADHYDPCSRLHTLIFHSNSIRRRLRGLPFIAASSMSAAAADTXXXXXXXXXXXXXXXXXAPAMRAAFSATGHDGFAAFSRRRTQVALLAHIYLRMDRVDLAQKQLRVMHAADEDAALTQLTTAWVHVATGGKHYREAAYIFDELIDKHQGSPLLLNGLAIAKMHMGEFNEAESALVEAASKSQGDADTLINLICCYRHLDKPASFIDRYSAQLRAAHPAHPYVVGLNNVESAFARVAATFA 1525
++V ++ +LQAV+LLAQYL P +RE+VL TL +WL D ++PTLQL +A IY+HE+++++A++AV GVTME + ALL +YLR+ R+DLAQ+QLR+M ADEDA LTQ+ AWV + G E Y+ +EL DK S LLN LA AKMH G+ EAE LV+AASK+Q D DTL+N+ICCY+HL KP FI+RY QL++ P HPYV + VE AF RVA+T+A
Sbjct: 59 SEVNDNSAPSLQAVRLLAQYLSDPSSRELVLETLPQWLTD---NHSPTLQLISAQIYMHENDLKNALKAVGQGVTMEHL----------------------------------------------------------------------------------------------------------------------ALLVSLYLRLGRIDLAQQQLRLMQQADEDATLTQMAQAWVLLHQGSSKLEECGYLVEELCDKFNASTALLNALACAKMHAGQAQEAEQHLVQAASKNQNDPDTLVNMICCYQHLQKPEDFINRYVNQLKSVAPEHPYVKAMTTVEGAFDRVASTYA 290
BLAST of mRNA_P-wetherbeei_contig1610.5.2 vs. uniprot
Match: A0A7S2RZ95_9STRA (Coatomer subunit epsilon n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RZ95_9STRA) HSP 1 Score: 181 bits (459), Expect = 4.820e-47 Identity = 91/157 (57.96%), Postives = 117/157 (74.52%), Query Frame = 2
Query: 1055 VALLAHIYLRMDRVDLAQKQLRVMHAADEDAALTQLTTAWVHVATGGKHYREAAYIFDELIDKHQGSPLLLNGLAIAKMHMGEFNEAESALVEAASKSQGDADTLINLICCYRHLDKPASFIDRYSAQLRAAHPAHPYVVGLNNVESAFARVAATFA 1525
+AL IYLRM+R DLA KQLR+M ADEDAALTQL +AWV++A GG +EAAYIFDELIDK + LLNG+A+A + MG+F+EAE L++A SK Q D DTLINLICCY+H+ K + ++R+ +QL+ P HP+V L VE+AF RV+A FA
Sbjct: 151 LALSVQIYLRMNRPDLATKQLRLMQQADEDAALTQLASAWVNLAQGGAKLQEAAYIFDELIDKFGSTVTLLNGVAVAHIQMGKFDEAEKYLMDAISKGQNDPDTLINLICCYQHMGKSSDLVNRHISQLKTVAPNHPFVAQLATVEAAFDRVSAGFA 307
BLAST of mRNA_P-wetherbeei_contig1610.5.2 vs. uniprot
Match: A0A7S2BS69_9STRA (Coatomer subunit epsilon n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BS69_9STRA) HSP 1 Score: 177 bits (450), Expect = 7.450e-46 Identity = 85/159 (53.46%), Postives = 116/159 (72.96%), Query Frame = 2
Query: 1052 QVALLAHIYLRMDRVDLAQKQLRVMHAADEDAALTQLTTAWVHVATGGKHYREAAYIFDELIDKHQGSPLLLNGLAIAKMHMGEFNEAESALVEAASKSQGDADTLINLICCYRHLDKPASFIDRYSAQLRAAHPAHPYVVGLNNVESAFARVAATFAA 1528
Q+AL I ++M RVDLA KQ+++M ADEDA LTQL T W+H+A+GG Y+EAAY+++ELIDK + +LLNG+A A +HMG F EAE L++A ++ D DTL+NLI CY+H+ KP I RY+ QL+++ P HPYV L VE AF RVAA++A+
Sbjct: 147 QLALNTQILIKMQRVDLAAKQVKLMQQADEDATLTQLATGWLHMASGGNKYQEAAYVYEELIDKFGPTAMLLNGVAAANLHMGLFEEAERFLLQAITQGPNDPDTLVNLIACYQHMCKPQDLIQRYTNQLKSSSPNHPYVKALATVEGAFDRVAASYAS 305
BLAST of mRNA_P-wetherbeei_contig1610.5.2 vs. uniprot
Match: F0YDB8_AURAN (Coatomer subunit epsilon n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YDB8_AURAN) HSP 1 Score: 176 bits (445), Expect = 4.080e-45 Identity = 115/353 (32.58%), Postives = 163/353 (46.18%), Query Frame = 2
Query: 470 QVKSDAPVALQAVKLLAQYLRQPEA-REMVLITLGEWLADPASGNNPTLQLAAASIYLHEDNVRDAIRAVRNGVTMEQVTVEA*KFDRGSRVLSATKALRPVRLGHFRNCLSADHYDPCSRLHTLIFHSNSIRRRLRGLPFIAASSMSAAAADTXXXXXXXXXXXXXXXXXAPAMRAAFSATGHDGFAAFSRRRTQVALLAHIYLRMDRVDLAQKQLRVMHAADEDAALTQLTTAWVHVATGGKHYREAAYIFDELIDKHQGSPLLLNGLAIAKMHMGEFNEAESALVEAASKSQGDADTLINLICCYRHLDKPASFIDRYSAQLRAAHPAHPYVVGLNNVESAFARVAATFA 1525
+V ++ + LQAVKLLAQYL P + ++MV++TLGEWL D AS ++PT+QL AA +Y ED +++A A+R+G TMEQ+ AL A L++ R+DLAQ L+ + ADEDA LTQL + WV++ATGG+ Y+EAAY F+ELIDK + + LLN LA+ KMH+ E++EAE L++A SK+ DADTLIN++ CY H+ K R Q+ HP HPY + + E+ F +A +A
Sbjct: 60 EVNEESAMPLQAVKLLAQYLEDPASTKDMVIMTLGEWLGDAASKDHPTVQLVAALVYEKEDLMKEAFTAIRHGQTMEQL----------------------------------------------------------------------------------------------------------------------ALWAQFCLKIHRLDLAQAHLKKLSDADEDATLTQLVSGWVNLATGGEKYKEAAYAFEELIDKFEATLSLLNSLAVCKMHLREWDEAEKLLLQAQSKNVNDADTLINMVTCYAHMGKDEQ---RLQKQMYGQHPNHPYTLKMKKAEAEFDVLAKKYA 291
BLAST of mRNA_P-wetherbeei_contig1610.5.2 vs. uniprot
Match: L1JSZ8_GUITC (Coatomer subunit epsilon n=3 Tax=Guillardia theta TaxID=55529 RepID=L1JSZ8_GUITC) HSP 1 Score: 163 bits (412), Expect = 6.440e-41 Identity = 107/354 (30.23%), Postives = 155/354 (43.79%), Query Frame = 2
Query: 467 TQVKSDAPVALQAVKLLAQYLRQPEAREMVLITLGEWLADPASGNNPTLQLAAASIYLHEDNVRDAIRAVRNGVTMEQVTVEA*KFDRGSRVLSATKALRPVRLGHFRNCLSADHYDPCSRLHTLIFHSNSIRRRLRGLPFIAASSMSAAAADTXXXXXXXXXXXXXXXXXAPAMRAAFSATGHDGFAAFSRRRTQVALLAHIYLRMDRVDLAQKQLRVMHAADEDAALTQLTTAWVHVATGGKHYREAAYIFDELIDKHQGSPLLLNGLAIAKMHMGEFNEAESALVEAASKSQGDADTLINLICCYRHLDKPASFIDRYSAQLRAAHPAHPYVVGLNNVESAFARVAATFAA 1528
+++ DAP ALQAVKLL+ YL +P+A+++VL+TL EWL+D + NNPTLQL A IYL + A + + + T+E V+++ +YLRM RVD+A+K L +M ++DA LTQLTTAWV+ A GG+ +EA YIF EL DK+ +PLLLNG+A+ +MH+G+F +A+ L++A SKS D TL NL+ C +H K + RY L A P + ++ F ++A TF A
Sbjct: 59 SEIGDDAPTALQAVKLLSTYLSKPDAKDIVLMTLLEWLSDSQTLNNPTLQLVAGIIYLDLGELEQAAKVLHSATTLEIVSMQV----------------------------------------------------------------------------------------------------------------------QVYLRMSRVDIAEKSLSLMSRMEDDATLTQLTTAWVYTALGGEKVQEAFYIFQELADKYNETPLLLNGMAVTQMHLGKFEDADKYLLKALSKSATDVQTLQNLVVCSQHTRKAPEVVSRYINTLSKAAPGCALLKRRAEADAMFDKIAPTFKA 294
BLAST of mRNA_P-wetherbeei_contig1610.5.2 vs. uniprot
Match: UPI001E859085 (Uncharacterized protein n=1 Tax=Ziziphus jujuba var. spinosa TaxID=714518 RepID=UPI001E859085) HSP 1 Score: 153 bits (386), Expect = 7.770e-37 Identity = 116/384 (30.21%), Postives = 171/384 (44.53%), Query Frame = 2
Query: 470 QVKSDAPVALQAVKLLAQYLRQPEAREMVLITLGEWLADPASGNNPTLQLAAASIYLHEDNVRDAIRAVRNGVTMEQVTVEA*KFDRGSRVLSATKALRPVRLGHFRNCLSADHYDPCSRLHTLIFHSNSIRRRLRGLPFIAASSMSAAAADTXXXXXXXXXXXXXXXXXAPAMRAAFSATGHDGFAAFSRRRTQVALLAHIYLRMDRVDLAQKQLRVMHAADEDAALTQLTTAWVHVATGGKHYREAAYIFDELIDKHQGSPLLLNGLAIAKMHMGEFNEAESALVEAASKS--------QGDADTLINLICCYRHLDKPASFIDRYS------------------------AQLRAAHPAHPYVVGLNNVESAFARVAATFA 1525
++ S A LQAVKLLA YL P+ +E + +L EWLADPA GNNP L+L A I++HE + +A++ G T+E L ++ P RL + ++A + +L T ++ + R +PA + + + R AL I+L+M R D A++QLRVM DED LTQL AW+++A GG +EA IF + +K+Q + L+LNG A+ MHMG F+EAE+ L+EA +K+ D +TL NL+ C HL KP S R +QL+ +HP H + E +F R + A
Sbjct: 31 EIDSSAATPLQAVKLLALYLSSPDNKESTISSLKEWLADPAIGNNPILRLIAGIIFMHEQDYNEALKHTNAGGTLE---------------LPNLFSIAP-RLSYIVRLIAASKFRTKLKL-TQKYYQRNFR--------------------------------------SPAFAIVITVDRENSRDEYDRH----ALNVQIFLKMHRSDYAERQLRVMQQIDEDHTLTQLANAWLNLAVGGAKIQEAYLIFQDFSEKYQMTSLILNGRAVCCMHMGNFDEAETLLLEALNKAIICFISQDAKDPETLANLVVCCLHLGKPPSRFLRLVVFCHFSILSSIISIPLEVVAKVLISQLKLSHPDHILIKRATAAEESFDRAVQSVA 355
BLAST of mRNA_P-wetherbeei_contig1610.5.2 vs. uniprot
Match: S8C3D0_9LAMI (Coatomer subunit epsilon n=1 Tax=Genlisea aurea TaxID=192259 RepID=S8C3D0_9LAMI) HSP 1 Score: 150 bits (379), Expect = 1.400e-36 Identity = 111/353 (31.44%), Postives = 150/353 (42.49%), Query Frame = 2
Query: 470 QVKSDAPVALQAVKLLAQYLRQPEA-REMVLITLGEWLADPASGNNPTLQLAAASIYLHEDNVRDAIRAVRNGVTMEQVTVEA*KFDRGSRVLSATKALRPVRLGHFRNCLSADHYDPCSRLHTLIFHSNSIRRRLRGLPFIAASSMSAAAADTXXXXXXXXXXXXXXXXXAPAMRAAFSATGHDGFAAFSRRRTQVALLAHIYLRMDRVDLAQKQLRVMHAADEDAALTQLTTAWVHVATGGKHYREAAYIFDELIDKHQGSPLLLNGLAIAKMHMGEFNEAESALVEAASKSQGDADTLINLICCYRHLDKPASFIDRYSAQLRAAHPAHPYVVGLNNVESAFARVAATFA 1525
++ S A LQAVKLLA YL PE +E V+ L E LADPA GNNP L+L A +++ HE + +A++ +G TME LH AL I+L++ R D A+KQLRVM DED LTQL AW+++A GG +EA IF + +K+ + L+LNG A+ MH GEF+EAE+ L+EA +K D +TL NL+ C HL KPAS RY +QL+ +HP H V ++ E +F R T A
Sbjct: 61 EIDSSAATPLQAVKLLALYLSNPENNKETVISNLRELLADPAIGNNPVLRLVAGTVFTHEQDYNEALKHTHSGGTME--------------------------------------------LH--------------------------------------------------------------------------ALNVQIFLKIHRSDYAEKQLRVMQQIDEDYPLTQLANAWLNLAVGGSKIQEAYLIFQDFSEKYPMTSLILNGKAVCCMHKGEFDEAETLLLEALNKDAKDPETLANLVVCSLHLGKPAS---RYLSQLKLSHPDHVLVKRASSAEESFERAIQTAA 292 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1610.5.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1610.5.2 >prot_P-wetherbeei_contig1610.5.2 ID=prot_P-wetherbeei_contig1610.5.2|Name=mRNA_P-wetherbeei_contig1610.5.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=209bp MSAAAADTAVASSAAAAVAVAAASPAPAMRAAFSATGHDGFAAFSRRRTQback to top mRNA from alignment at P-wetherbeei_contig1610:2297..6513- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1610.5.2 ID=mRNA_P-wetherbeei_contig1610.5.2|Name=mRNA_P-wetherbeei_contig1610.5.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=4217bp|location=Sequence derived from alignment at P-wetherbeei_contig1610:2297..6513- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1610:2297..6513- >mRNA_P-wetherbeei_contig1610.5.2 ID=mRNA_P-wetherbeei_contig1610.5.2|Name=mRNA_P-wetherbeei_contig1610.5.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=627bp|location=Sequence derived from alignment at P-wetherbeei_contig1610:2297..6513- (Phaeothamnion wetherbeei SAG_119_79)back to top |