mRNA_P-wetherbeei_contig1610.5.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1610.5.2
Unique NamemRNA_P-wetherbeei_contig1610.5.2
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1610.5.2 vs. uniprot
Match: D7FXM7_ECTSI (Coatomer subunit epsilon n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXM7_ECTSI)

HSP 1 Score: 280 bits (717), Expect = 1.480e-82
Identity = 161/352 (45.74%), Postives = 193/352 (54.83%), Query Frame = 2
Query:  470 QVKSDAPVALQAVKLLAQYLRQPEAREMVLITLGEWLADPASGNNPTLQLAAASIYLHEDNVRDAIRAVRNGVTMEQVTVEA*KFDRGSRVLSATKALRPVRLGHFRNCLSADHYDPCSRLHTLIFHSNSIRRRLRGLPFIAASSMSAAAADTXXXXXXXXXXXXXXXXXAPAMRAAFSATGHDGFAAFSRRRTQVALLAHIYLRMDRVDLAQKQLRVMHAADEDAALTQLTTAWVHVATGGKHYREAAYIFDELIDKHQGSPLLLNGLAIAKMHMGEFNEAESALVEAASKSQGDADTLINLICCYRHLDKPASFIDRYSAQLRAAHPAHPYVVGLNNVESAFARVAATFA 1525
            ++K DAP ALQAV+L+AQYL  PE+RE+V+ TL  WL DP S NNPT+QL AA+++ HE ++++A+R++RNGVTMEQ                                                                                                                       A+LA IYLRMDRVDLA KQ++V+  AD+DA LTQL  AWVH+A GGK Y+EAAYIFDELIDK+Q SPLLLN  A+AKMHMGE+ EAE+ LVEA SKSQ DADTL+NLIC  RHLDKPASF+DRY  QL+ AHP HPYV  L N ESAF RVAATFA
Sbjct:   60 EIKDDAPPALQAVRLMAQYLSNPESREIVIETLKMWLTDPGSCNNPTVQLLAAAVFTHEGDLKEAVRSIRNGVTMEQT----------------------------------------------------------------------------------------------------------------------AMLAQIYLRMDRVDLALKQVQVLQQADDDATLTQLVVAWVHLAQGGKRYQEAAYIFDELIDKYQASPLLLNSSAVAKMHMGEYQEAETILVEAISKSQNDADTLVNLICVCRHLDKPASFVDRYINQLKTAHPQHPYVQSLANAESAFDRVAATFA 293          
BLAST of mRNA_P-wetherbeei_contig1610.5.2 vs. uniprot
Match: A0A836CM75_9STRA (Coatomer subunit epsilon n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM75_9STRA)

HSP 1 Score: 236 bits (602), Expect = 1.640e-66
Identity = 149/353 (42.21%), Postives = 179/353 (50.71%), Query Frame = 2
Query:  473 VKSDAPVALQAVKLLAQYLRQPEAREMVLITLGEWLADPASGNNPTLQLAAASIYLHEDNVRDAIRAVRNGVTMEQVTVEA*KFDRGSRVLSATKALRPVRLGHFRNCLSADHYDPCSRLHTLIFHSNSIRRRLRGLPFIAASSMSAAAADTXXXXXXXXXXXXXXXXXAPAMRAAFSATGHDGFAAFSRRRTQVALLAHIYLRMDRVDLAQKQLRVMHAADEDAALTQLTTAWVHVATGG-KHYREAAYIFDELIDKHQGSPLLLNGLAIAKMHMGEFNEAESALVEAASK-SQGDADTLINLICCYRHLDKPASFIDRYSAQLRAAHPAHPYVVGLNNVESAFARVAATFA 1525
            V   AP +LQA KLLA Y  QPE R+MVL+TLGEWL DP+SG+NPTLQL AA IY  EDN+++AIRA+RNGVTMEQ                                                                                                                       ALLA IYLRMDR+DLA KQ R+M  ADED+ LT +  AWV +A G  K  +EAAY+FDELIDK+Q SPLLLNG+A+AKMHMGE+ EAE+ L+EAA K   G ADTL+NL+ C RHLDKP S   +Y  QL+  +P H Y V L N ESAF+RV+ + A
Sbjct:   62 VSDSAPTSLQACKLLATYEAQPENRDMVLLTLGEWLDDPSSGHNPTLQLLAADIYCREDNLKEAIRAIRNGVTMEQT----------------------------------------------------------------------------------------------------------------------ALLAQIYLRMDRLDLALKQHRIMQEADEDSTLTHMVGAWVCLAAGTTKKAQEAAYVFDELIDKYQASPLLLNGVAVAKMHMGEWGEAEANLLEAAGKPGGGGADTLVNLVTCCRHLDKPESQAQQYLEQLKEKYPNHAYTVTLRNAESAFSRVSDSLA 296          
BLAST of mRNA_P-wetherbeei_contig1610.5.2 vs. uniprot
Match: A0A7S2F9R0_9STRA (Coatomer subunit epsilon n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2F9R0_9STRA)

HSP 1 Score: 219 bits (558), Expect = 1.620e-60
Identity = 133/346 (38.44%), Postives = 171/346 (49.42%), Query Frame = 2
Query:  488 PVALQAVKLLAQYLRQPEAREMVLITLGEWLADPASGNNPTLQLAAASIYLHEDNVRDAIRAVRNGVTMEQVTVEA*KFDRGSRVLSATKALRPVRLGHFRNCLSADHYDPCSRLHTLIFHSNSIRRRLRGLPFIAASSMSAAAADTXXXXXXXXXXXXXXXXXAPAMRAAFSATGHDGFAAFSRRRTQVALLAHIYLRMDRVDLAQKQLRVMHAADEDAALTQLTTAWVHVATGGKHYREAAYIFDELIDKHQGSPLLLNGLAIAKMHMGEFNEAESALVEAASKSQGDADTLINLICCYRHLDKPASFIDRYSAQLRAAHPAHPYVVGLNNVESAFARVAATFA 1525
            PV+LQAVKLLA+YL  P ++E+VL+TLGEWLADP S  N +LQL AA IY+HE+N +DA++ +R+G TMEQ+                                                                                                                      AL   IYL+MDR DLA KQ+R+M  ADEDA LTQL+ AW ++ATGGK  +EAA+I++ELIDK   +  LLNG+A+A MHMG+F+EAE  L  A  +   D DTL+NLI CY+HL KP+  I R+  QLR+  P +P V  LN VE AF RVA T+A
Sbjct:   68 PVSLQAVKLLARYLSDPSSKELVLMTLGEWLADPGSAGNSSLQLIAAVIYMHENNTKDALKTIRHGTTMEQL----------------------------------------------------------------------------------------------------------------------ALNIQIYLKMDRPDLATKQVRLMQQADEDATLTQLSLAWTYLATGGKKLQEAAFIYEELIDKFGPTTSLLNGVAVANMHMGKFDEAEKTLQNALQQGPNDPDTLVNLISCYQHLSKPSELIQRHINQLRSGAPNNPMVQQLNTVEGAFDRVAGTYA 295          
BLAST of mRNA_P-wetherbeei_contig1610.5.2 vs. uniprot
Match: A0A7S2XUN8_9STRA (Coatomer subunit epsilon n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XUN8_9STRA)

HSP 1 Score: 203 bits (516), Expect = 6.710e-55
Identity = 126/353 (35.69%), Postives = 168/353 (47.59%), Query Frame = 2
Query:  467 TQVKSDAPVALQAVKLLAQYLRQPEAREMVLITLGEWLADPASGNNPTLQLAAASIYLHEDNVRDAIRAVRNGVTMEQVTVEA*KFDRGSRVLSATKALRPVRLGHFRNCLSADHYDPCSRLHTLIFHSNSIRRRLRGLPFIAASSMSAAAADTXXXXXXXXXXXXXXXXXAPAMRAAFSATGHDGFAAFSRRRTQVALLAHIYLRMDRVDLAQKQLRVMHAADEDAALTQLTTAWVHVATGGKHYREAAYIFDELIDKHQGSPLLLNGLAIAKMHMGEFNEAESALVEAASKSQGDADTLINLICCYRHLDKPASFIDRYSAQLRAAHPAHPYVVGLNNVESAFARVAATFA 1525
            ++V  ++  +LQAV+LLAQYL  P +RE+VL TL +WL D    ++PTLQL +A IY+HE+++++A++AV  GVTME +                                                                                                                      ALL  +YLR+ R+DLAQ+QLR+M  ADEDA LTQ+  AWV +  G     E  Y+ +EL DK   S  LLN LA AKMH G+  EAE  LV+AASK+Q D DTL+N+ICCY+HL KP  FI+RY  QL++  P HPYV  +  VE AF RVA+T+A
Sbjct:   59 SEVNDNSAPSLQAVRLLAQYLSDPSSRELVLETLPQWLTD---NHSPTLQLISAQIYMHENDLKNALKAVGQGVTMEHL----------------------------------------------------------------------------------------------------------------------ALLVSLYLRLGRIDLAQQQLRLMQQADEDATLTQMAQAWVLLHQGSSKLEECGYLVEELCDKFNASTALLNALACAKMHAGQAQEAEQHLVQAASKNQNDPDTLVNMICCYQHLQKPEDFINRYVNQLKSVAPEHPYVKAMTTVEGAFDRVASTYA 290          
BLAST of mRNA_P-wetherbeei_contig1610.5.2 vs. uniprot
Match: A0A7S2RZ95_9STRA (Coatomer subunit epsilon n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RZ95_9STRA)

HSP 1 Score: 181 bits (459), Expect = 4.820e-47
Identity = 91/157 (57.96%), Postives = 117/157 (74.52%), Query Frame = 2
Query: 1055 VALLAHIYLRMDRVDLAQKQLRVMHAADEDAALTQLTTAWVHVATGGKHYREAAYIFDELIDKHQGSPLLLNGLAIAKMHMGEFNEAESALVEAASKSQGDADTLINLICCYRHLDKPASFIDRYSAQLRAAHPAHPYVVGLNNVESAFARVAATFA 1525
            +AL   IYLRM+R DLA KQLR+M  ADEDAALTQL +AWV++A GG   +EAAYIFDELIDK   +  LLNG+A+A + MG+F+EAE  L++A SK Q D DTLINLICCY+H+ K +  ++R+ +QL+   P HP+V  L  VE+AF RV+A FA
Sbjct:  151 LALSVQIYLRMNRPDLATKQLRLMQQADEDAALTQLASAWVNLAQGGAKLQEAAYIFDELIDKFGSTVTLLNGVAVAHIQMGKFDEAEKYLMDAISKGQNDPDTLINLICCYQHMGKSSDLVNRHISQLKTVAPNHPFVAQLATVEAAFDRVSAGFA 307          
BLAST of mRNA_P-wetherbeei_contig1610.5.2 vs. uniprot
Match: A0A7S2BS69_9STRA (Coatomer subunit epsilon n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BS69_9STRA)

HSP 1 Score: 177 bits (450), Expect = 7.450e-46
Identity = 85/159 (53.46%), Postives = 116/159 (72.96%), Query Frame = 2
Query: 1052 QVALLAHIYLRMDRVDLAQKQLRVMHAADEDAALTQLTTAWVHVATGGKHYREAAYIFDELIDKHQGSPLLLNGLAIAKMHMGEFNEAESALVEAASKSQGDADTLINLICCYRHLDKPASFIDRYSAQLRAAHPAHPYVVGLNNVESAFARVAATFAA 1528
            Q+AL   I ++M RVDLA KQ+++M  ADEDA LTQL T W+H+A+GG  Y+EAAY+++ELIDK   + +LLNG+A A +HMG F EAE  L++A ++   D DTL+NLI CY+H+ KP   I RY+ QL+++ P HPYV  L  VE AF RVAA++A+
Sbjct:  147 QLALNTQILIKMQRVDLAAKQVKLMQQADEDATLTQLATGWLHMASGGNKYQEAAYVYEELIDKFGPTAMLLNGVAAANLHMGLFEEAERFLLQAITQGPNDPDTLVNLIACYQHMCKPQDLIQRYTNQLKSSSPNHPYVKALATVEGAFDRVAASYAS 305          
BLAST of mRNA_P-wetherbeei_contig1610.5.2 vs. uniprot
Match: F0YDB8_AURAN (Coatomer subunit epsilon n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YDB8_AURAN)

HSP 1 Score: 176 bits (445), Expect = 4.080e-45
Identity = 115/353 (32.58%), Postives = 163/353 (46.18%), Query Frame = 2
Query:  470 QVKSDAPVALQAVKLLAQYLRQPEA-REMVLITLGEWLADPASGNNPTLQLAAASIYLHEDNVRDAIRAVRNGVTMEQVTVEA*KFDRGSRVLSATKALRPVRLGHFRNCLSADHYDPCSRLHTLIFHSNSIRRRLRGLPFIAASSMSAAAADTXXXXXXXXXXXXXXXXXAPAMRAAFSATGHDGFAAFSRRRTQVALLAHIYLRMDRVDLAQKQLRVMHAADEDAALTQLTTAWVHVATGGKHYREAAYIFDELIDKHQGSPLLLNGLAIAKMHMGEFNEAESALVEAASKSQGDADTLINLICCYRHLDKPASFIDRYSAQLRAAHPAHPYVVGLNNVESAFARVAATFA 1525
            +V  ++ + LQAVKLLAQYL  P + ++MV++TLGEWL D AS ++PT+QL AA +Y  ED +++A  A+R+G TMEQ+                                                                                                                      AL A   L++ R+DLAQ  L+ +  ADEDA LTQL + WV++ATGG+ Y+EAAY F+ELIDK + +  LLN LA+ KMH+ E++EAE  L++A SK+  DADTLIN++ CY H+ K      R   Q+   HP HPY + +   E+ F  +A  +A
Sbjct:   60 EVNEESAMPLQAVKLLAQYLEDPASTKDMVIMTLGEWLGDAASKDHPTVQLVAALVYEKEDLMKEAFTAIRHGQTMEQL----------------------------------------------------------------------------------------------------------------------ALWAQFCLKIHRLDLAQAHLKKLSDADEDATLTQLVSGWVNLATGGEKYKEAAYAFEELIDKFEATLSLLNSLAVCKMHLREWDEAEKLLLQAQSKNVNDADTLINMVTCYAHMGKDEQ---RLQKQMYGQHPNHPYTLKMKKAEAEFDVLAKKYA 291          
BLAST of mRNA_P-wetherbeei_contig1610.5.2 vs. uniprot
Match: L1JSZ8_GUITC (Coatomer subunit epsilon n=3 Tax=Guillardia theta TaxID=55529 RepID=L1JSZ8_GUITC)

HSP 1 Score: 163 bits (412), Expect = 6.440e-41
Identity = 107/354 (30.23%), Postives = 155/354 (43.79%), Query Frame = 2
Query:  467 TQVKSDAPVALQAVKLLAQYLRQPEAREMVLITLGEWLADPASGNNPTLQLAAASIYLHEDNVRDAIRAVRNGVTMEQVTVEA*KFDRGSRVLSATKALRPVRLGHFRNCLSADHYDPCSRLHTLIFHSNSIRRRLRGLPFIAASSMSAAAADTXXXXXXXXXXXXXXXXXAPAMRAAFSATGHDGFAAFSRRRTQVALLAHIYLRMDRVDLAQKQLRVMHAADEDAALTQLTTAWVHVATGGKHYREAAYIFDELIDKHQGSPLLLNGLAIAKMHMGEFNEAESALVEAASKSQGDADTLINLICCYRHLDKPASFIDRYSAQLRAAHPAHPYVVGLNNVESAFARVAATFAA 1528
            +++  DAP ALQAVKLL+ YL +P+A+++VL+TL EWL+D  + NNPTLQL A  IYL    +  A + + +  T+E V+++                                                                                                                        +YLRM RVD+A+K L +M   ++DA LTQLTTAWV+ A GG+  +EA YIF EL DK+  +PLLLNG+A+ +MH+G+F +A+  L++A SKS  D  TL NL+ C +H  K    + RY   L  A P    +      ++ F ++A TF A
Sbjct:   59 SEIGDDAPTALQAVKLLSTYLSKPDAKDIVLMTLLEWLSDSQTLNNPTLQLVAGIIYLDLGELEQAAKVLHSATTLEIVSMQV----------------------------------------------------------------------------------------------------------------------QVYLRMSRVDIAEKSLSLMSRMEDDATLTQLTTAWVYTALGGEKVQEAFYIFQELADKYNETPLLLNGMAVTQMHLGKFEDADKYLLKALSKSATDVQTLQNLVVCSQHTRKAPEVVSRYINTLSKAAPGCALLKRRAEADAMFDKIAPTFKA 294          
BLAST of mRNA_P-wetherbeei_contig1610.5.2 vs. uniprot
Match: UPI001E859085 (Uncharacterized protein n=1 Tax=Ziziphus jujuba var. spinosa TaxID=714518 RepID=UPI001E859085)

HSP 1 Score: 153 bits (386), Expect = 7.770e-37
Identity = 116/384 (30.21%), Postives = 171/384 (44.53%), Query Frame = 2
Query:  470 QVKSDAPVALQAVKLLAQYLRQPEAREMVLITLGEWLADPASGNNPTLQLAAASIYLHEDNVRDAIRAVRNGVTMEQVTVEA*KFDRGSRVLSATKALRPVRLGHFRNCLSADHYDPCSRLHTLIFHSNSIRRRLRGLPFIAASSMSAAAADTXXXXXXXXXXXXXXXXXAPAMRAAFSATGHDGFAAFSRRRTQVALLAHIYLRMDRVDLAQKQLRVMHAADEDAALTQLTTAWVHVATGGKHYREAAYIFDELIDKHQGSPLLLNGLAIAKMHMGEFNEAESALVEAASKS--------QGDADTLINLICCYRHLDKPASFIDRYS------------------------AQLRAAHPAHPYVVGLNNVESAFARVAATFA 1525
            ++ S A   LQAVKLLA YL  P+ +E  + +L EWLADPA GNNP L+L A  I++HE +  +A++    G T+E               L    ++ P RL +    ++A  +    +L T  ++  + R                                      +PA     +    +    + R     AL   I+L+M R D A++QLRVM   DED  LTQL  AW+++A GG   +EA  IF +  +K+Q + L+LNG A+  MHMG F+EAE+ L+EA +K+          D +TL NL+ C  HL KP S   R                          +QL+ +HP H  +      E +F R   + A
Sbjct:   31 EIDSSAATPLQAVKLLALYLSSPDNKESTISSLKEWLADPAIGNNPILRLIAGIIFMHEQDYNEALKHTNAGGTLE---------------LPNLFSIAP-RLSYIVRLIAASKFRTKLKL-TQKYYQRNFR--------------------------------------SPAFAIVITVDRENSRDEYDRH----ALNVQIFLKMHRSDYAERQLRVMQQIDEDHTLTQLANAWLNLAVGGAKIQEAYLIFQDFSEKYQMTSLILNGRAVCCMHMGNFDEAETLLLEALNKAIICFISQDAKDPETLANLVVCCLHLGKPPSRFLRLVVFCHFSILSSIISIPLEVVAKVLISQLKLSHPDHILIKRATAAEESFDRAVQSVA 355          
BLAST of mRNA_P-wetherbeei_contig1610.5.2 vs. uniprot
Match: S8C3D0_9LAMI (Coatomer subunit epsilon n=1 Tax=Genlisea aurea TaxID=192259 RepID=S8C3D0_9LAMI)

HSP 1 Score: 150 bits (379), Expect = 1.400e-36
Identity = 111/353 (31.44%), Postives = 150/353 (42.49%), Query Frame = 2
Query:  470 QVKSDAPVALQAVKLLAQYLRQPEA-REMVLITLGEWLADPASGNNPTLQLAAASIYLHEDNVRDAIRAVRNGVTMEQVTVEA*KFDRGSRVLSATKALRPVRLGHFRNCLSADHYDPCSRLHTLIFHSNSIRRRLRGLPFIAASSMSAAAADTXXXXXXXXXXXXXXXXXAPAMRAAFSATGHDGFAAFSRRRTQVALLAHIYLRMDRVDLAQKQLRVMHAADEDAALTQLTTAWVHVATGGKHYREAAYIFDELIDKHQGSPLLLNGLAIAKMHMGEFNEAESALVEAASKSQGDADTLINLICCYRHLDKPASFIDRYSAQLRAAHPAHPYVVGLNNVESAFARVAATFA 1525
            ++ S A   LQAVKLLA YL  PE  +E V+  L E LADPA GNNP L+L A +++ HE +  +A++   +G TME                                            LH                                                                          AL   I+L++ R D A+KQLRVM   DED  LTQL  AW+++A GG   +EA  IF +  +K+  + L+LNG A+  MH GEF+EAE+ L+EA +K   D +TL NL+ C  HL KPAS   RY +QL+ +HP H  V   ++ E +F R   T A
Sbjct:   61 EIDSSAATPLQAVKLLALYLSNPENNKETVISNLRELLADPAIGNNPVLRLVAGTVFTHEQDYNEALKHTHSGGTME--------------------------------------------LH--------------------------------------------------------------------------ALNVQIFLKIHRSDYAEKQLRVMQQIDEDYPLTQLANAWLNLAVGGSKIQEAYLIFQDFSEKYPMTSLILNGKAVCCMHKGEFDEAETLLLEALNKDAKDPETLANLVVCSLHLGKPAS---RYLSQLKLSHPDHVLVKRASSAEESFERAIQTAA 292          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1610.5.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FXM7_ECTSI1.480e-8245.74Coatomer subunit epsilon n=2 Tax=Ectocarpus TaxID=... [more]
A0A836CM75_9STRA1.640e-6642.21Coatomer subunit epsilon n=1 Tax=Tribonema minus T... [more]
A0A7S2F9R0_9STRA1.620e-6038.44Coatomer subunit epsilon n=1 Tax=Florenciella parv... [more]
A0A7S2XUN8_9STRA6.710e-5535.69Coatomer subunit epsilon n=1 Tax=Fibrocapsa japoni... [more]
A0A7S2RZ95_9STRA4.820e-4757.96Coatomer subunit epsilon n=1 Tax=Rhizochromulina m... [more]
A0A7S2BS69_9STRA7.450e-4653.46Coatomer subunit epsilon n=1 Tax=Dictyocha speculu... [more]
F0YDB8_AURAN4.080e-4532.58Coatomer subunit epsilon n=1 Tax=Aureococcus anoph... [more]
L1JSZ8_GUITC6.440e-4130.23Coatomer subunit epsilon n=3 Tax=Guillardia theta ... [more]
UPI001E8590857.770e-3730.21Uncharacterized protein n=1 Tax=Ziziphus jujuba va... [more]
S8C3D0_9LAMI1.400e-3631.44Coatomer subunit epsilon n=1 Tax=Genlisea aurea Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1610contigP-wetherbeei_contig1610:2297..6513 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FXM7
Preferred nameCOPE1
PFAMsCoatomer_E
Model size3394
Max annot lvl2759|Eukaryota
KEGG koko:K17268
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003682,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005773,GO:0005774,GO:0005794,GO:0005798,GO:0005829,GO:0006810,GO:0006886,GO:0006888,GO:0006890,GO:0006891,GO:0006900,GO:0006901,GO:0006996,GO:0007034,GO:0008104,GO:0008150,GO:0009987,GO:0012505,GO:0012506,GO:0015031,GO:0015833,GO:0016020,GO:0016043,GO:0016050,GO:0016192,GO:0016197,GO:0030117,GO:0030120,GO:0030126,GO:0030135,GO:0030137,GO:0030659,GO:0030660,GO:0030662,GO:0030663,GO:0031090,GO:0031410,GO:0031982,GO:0032509,GO:0032511,GO:0032991,GO:0033036,GO:0034613,GO:0042886,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044433,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0045184,GO:0045324,GO:0046907,GO:0048193,GO:0048475,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0061024,GO:0070727,GO:0071702,GO:0071705,GO:0071840,GO:0071985,GO:0097708,GO:0098588,GO:0098796,GO:0098805,GO:1990841
Exons2
Evalue7.36e-74
EggNOG OGsKOG3081@1|root,KOG3081@2759|Eukaryota
Ec32 ortholog descriptionVesicle coat complex COPI, epsilon subunit
Ec32 orthologEc-28_002330.1
Descriptionretrograde vesicle-mediated transport, Golgi to ER
Cds size627
COG categoryU
BRITEko00000,ko04131,ko04147
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186077.2555325-UTR-P-wetherbeei_contig1610:2296..41591683186077.2555325-UTR-P-wetherbeei_contig1610:2296..4159Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1610 2297..4159 -
1683186077.2872963-UTR-P-wetherbeei_contig1610:5609..65131683186077.2872963-UTR-P-wetherbeei_contig1610:5609..6513Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1610 5610..6513 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186077.2727711-CDS-P-wetherbeei_contig1610:4159..44831683186077.2727711-CDS-P-wetherbeei_contig1610:4159..4483Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1610 4160..4483 -
1683186077.280215-CDS-P-wetherbeei_contig1610:5306..56091683186077.280215-CDS-P-wetherbeei_contig1610:5306..5609Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1610 5307..5609 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1610.5.2prot_P-wetherbeei_contig1610.5.2Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1610 4160..5609 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1610.5.2

>prot_P-wetherbeei_contig1610.5.2 ID=prot_P-wetherbeei_contig1610.5.2|Name=mRNA_P-wetherbeei_contig1610.5.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=209bp
MSAAAADTAVASSAAAAVAVAAASPAPAMRAAFSATGHDGFAAFSRRRTQ
VALLAHIYLRMDRVDLAQKQLRVMHAADEDAALTQLTTAWVHVATGGKHY
REAAYIFDELIDKHQGSPLLLNGLAIAKMHMGEFNEAESALVEAASKSQG
DADTLINLICCYRHLDKPASFIDRYSAQLRAAHPAHPYVVGLNNVESAFA
RVAATFAA*
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mRNA from alignment at P-wetherbeei_contig1610:2297..6513-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1610.5.2 ID=mRNA_P-wetherbeei_contig1610.5.2|Name=mRNA_P-wetherbeei_contig1610.5.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=4217bp|location=Sequence derived from alignment at P-wetherbeei_contig1610:2297..6513- (Phaeothamnion wetherbeei SAG_119_79)
TCCCAGAAGCGCTCCGCATCGAGCGGGATGAGTATATATATCGCGCCTAC ATTGCACTCGGCCAGCACAACATTGTGCTGAACGAGGTGTGGGAGAAAAG ACGATCGATAACTGTAGTTTCCTTCTGCCTAGCTTTCTCTTTCGGAGCAA CTATCCCTTTCTGGGATAGGCTGTCTTTCATCTGTCACCTCCGATTGGCA GACCAAAACGTGGAAAGAAATCGTTTCCTATCTTTCAATCTCATGCACAA GGCGTCTTTCTCTTTTCCGATTTCCTGCCTGCAAATCGTAAATGTATGGG CTGCTGCGCGAAGAAGGTACCGCGGCGCATCAGTATGCCCTTGTCGCAAA CCCACGAACGCATTCCTGCCGTTTTGCCTTGCATAATTGCTTCCACCGGG GCCTTGGCCGCGGTCGCCTGACCAATACCGGCGCCAACACCGGAACAACA CAAACGACGCCTTACAACGCAGGTCAAGAGCGACGCCCCGGTGGCGCTGC AGGCCGTCAAGCTGCTGGCGCAGTACCTCCGGCAGCCGGAGGCGCGCGAG ATGGTGCTGATCACGCTCGGCGAGTGGCTTGCTGACCCAGCATCAGGCAA CAACCCGACGCTACAGCTGGCCGCCGCCAGCATCTACCTCCACGAGGACA ACGTGCGGGATGCAATCCGCGCCGTGCGCAACGGCGTCACCATGGAGCAG GTAACTGTCGAAGCATAGAAATTTGACCGTGGCTCTCGCGTTCTTTCGGC TACCAAGGCTTTGCGTCCAGTTCGTTTGGGCCATTTTCGGAACTGTCTCT CGGCCGATCATTATGACCCCTGCAGCCGTTTGCACACATTGATCTTTCAT TCAAACTCGATTCGGCGACGGCTTCGGGGGCTACCGTTCATCGCGGCTTC TTCGATGTCGGCGGCGGCGGCGGATACTGCTGTCGCTTCTTCGGCGGCGG CGGCGGTGGCGGTGGCGGCGGCCTCGCCGGCGCCGGCGATGAGGGCGGCT TTCTCGGCAACGGGGCATGATGGCTTCGCCGCTTTCTCGCGTCGGAGAAC ACAGGTGGCGCTGCTGGCGCATATCTACCTGCGGATGGACCGCGTTGATT TGGCGCAGAAGCAGCTGCGGGTGATGCACGCCGCGGATGAGGACGCGGCG CTCACGCAGCTCACCACCGCGTGGGTGCACGTCGCCACCGGCGGGAAGCA CTACAGGGTGAGTAGAGCGGAAGTGGAAAGCGGGTGGGGGCGGGACTTGG CGAGTATTGCTGATGGTTTCTTTCTGCTTGTTTGTGTTCGTGTCAATGGA GCTTTCGGACGGATTGGGTTTCGACCATCCGTTTTTCTCCATGATAGGTC TCTGTCGTTCGAGTTTCTGGTTTTTGTGAGGCTAAACCCTTTTCTCTCCG GGAAGCGGGACGGTTTCGCCTCGCCTTCATGCTGGAGTGAAGCGGCTTGG CCGCACGGCGCTCTGTTGTTTGCCGTTGCCGAGCATGCGCCGAGCTTTAG AGGGCGATCTATGCATGCTGTATTGAAAAGACAGGTCCATCTCTATTGCT TTTTGGCGCCACACCGAAAGAGCTTTGCTTTGCGCTCCAGCATTTTGGAT GAACCTTTCTGTTGGTGTTGCTTGACTTTCTATCGTAGGATCTCTAGGCG TTGTGGGTAGGTGGGCTTCTATGAGCCGTTTCACAGCAACGGACTTCCTA CTCTGGTTATTTGGGCGAGAAGGATAAAGTTGGAATGGGAGAAAGCCTTT GTTTCCTGTGACTTTGTGGAAGAAATCGTTCCTCATACTTTAATTCGGGG TGAAGGCTGTTAACTAGCGTTGTCATATGAGCTCCGTCGAAAACACGGTT GTGCACGGCATCTTGCCATTAGTCGCGTTTGCCGTACCAGCCTCCCCCTA CTCTACTTGCTCACTTTCAATCAACACTGTCGGCTGCGGCCATCAACAGG ACAGTCCTCGCAGCCTCCAACTTTATAGCCATATCCCTCTTCCCCTTTCC TTCTCCCCTTCCGCTCTCCTTCCCCTGCAGGAAGCGGCGTACATCTTCGA CGAACTCATCGACAAGCACCAAGGCTCCCCCCTGCTGCTCAATGGCCTCG CGATCGCCAAGATGCACATGGGTGAATTCAACGAGGCAGAGTCCGCGCTG GTGGAAGCCGCCAGCAAGAGCCAGGGGGACGCTGACACGCTGATCAACCT GATATGCTGTTACCGGCACCTGGACAAGCCGGCATCGTTCATCGACAGGT ACTCGGCGCAGCTGCGTGCGGCGCACCCGGCGCACCCGTACGTCGTCGGG CTGAACAATGTTGAGAGCGCGTTCGCGCGGGTCGCGGCGACATTTGCCGC GTGACGGCGAGGGAGATGGAGATGCTGAGACTGGCTCGCTGCATTGATGG ATGGCGCGAGGAGCCGGCCGGGCTGGCTAAATATAGTGTGAGGCGGGCGG GAGGCCCGGCGCTGGTCCGGCGGCGGCGGCGGCGGGCGAGTTTGTGGCGG GTGATGACAATGGCGGCTTCTGTGCATCAGGAGCGGGAGCGAACGGCAAC GAAGACGAGCCGCTCCGTTTTTGAACAAAATTAATGGCGAAAGGAAGTAT ATCTGTAAAGAACGGAGTAACATAGGTGGAAGAGGAGAACGAAACTTTAG GAGCCGGTGAAACGCCTCAAACACCACGTGCCGAAACCACCTGGAAAGAC GGTTTCAAGCGACGTTGGTGGGTCATTTCGAGGAAAGAAATAAAGCAAAC GGAGAACATCGCGCCAGAGACAGACTACTCTGGCGCGTTGGATTAGGTTA GGCTGTGTATCTGGCTCGATTTCTTTGCGGCATCGACGCAGCCTTGAAGA ACAAGCATAGGTTCCATCTCGGCGGCAGGGTCTTCGCGTCAAGACCGCCG ACATCGCGGCCAATTCGCCAAGAGCCCGCTGCGTCGTGCCAACGACGTTA GCGTCCTCGGTCTCCTTGGCCGTCTTGAAGATCGGGCGCCAGCGGCGCAA CAAACATGTTCGACTTCGACACGCGGTGCGGCGTGGGAAAACGGTGCTCT GGACCGCGGCAGCGCGACACACGAGCGCGTCCCGACGCCGGCTTCCCGCG GCCCGACGGTGTCGTCGGCACGAGGACGAGATAAGGCCGGCGACGGTGGC AGCGGCAGCGGCCCCGTGGCCGGCGACATCTGGGGCATGGCGTCGCCCCT CCGCGGATTCATGGGATCGCGCAATTCTGCCCGGCCGGCGTCGCGGCAGG CCATCTCGGACCTTATGGACTTGAACCTGGCGCTCAAGGCCGACAAGATG GAGCAGAGCGGCCGAAACGCCCGCCGTAGCGGCCAGAGCACTGGCTATGG TTCAGAGTGGTCGCCGGCGCCCGCCGCGGCCCCCCGTTGGCAGAAACAGC GCAGCCGGGGCCGTGGGAGCGGCGGCACCGGCACCGCCACCCGCCGCCAG GCGCCCGCGGCCGCCCATACGCTGGAAGACGACGTTGAGGTCTCTGCCTG CCGGATGGGAGTCCTGAAAGGCCGCAACGGAAACGACGGACCTTCGCCGT CCCGGCTCTGGACGCCGCCGCCACCTCATACCGCCGACGGCCACGGTGTC GGCGGGTATGGCGGGGGCGACGGCGCCGTTGGTGCTGCACCAGGGCCGGT GCCAGCCACGACCGCGGCCAGCGTGCTTCGGACGCTGCTCACGGAAGAGC ACAAGGGCCATCTCCGGGCGGTGGCCGGCGAGCACCTGCTGTCAGCGTCG CGGTCCGAGCCGCGGCTCATGAAGCACGGGTCCAACGCGCACGCCGGCAC CACGACAACGGCGGCGGCTGCCTCGGCAGTAGCAGTGCCAACAGCAGCAA CTGCGGCGGCAACGGCGGCGGCGGCTGCAACTTCGGCAACGGCAGGAGCA GTCTCCCGGACATTTGTCGTGTCACCCGGCGCCATCGAGGTATTGCCGGG GCCCCTGCTGGCCATTCCGCGGGCGGCACCGGGCGCCGCCGCAGCCTCGC CATCGCCATGGAGCCGCGGTGGCGCCTTGGACACGCCGGCCCCCGTCGTC GCGCCGTCGCATGGGGAGAGACTCCGGACTCCGGTGGCGACGGCGGTGGC GGCAACGGCGTTGCCGGTGCATAAAGTTTCCGGAGTCGACGCATGGCTGT CGCTCCGTTCTTCACTTCTCTGGCGCCCAGCGGTAGCAACGGCAGCTGCC AGCGCCGGCGAAGAGGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1610:2297..6513-

>mRNA_P-wetherbeei_contig1610.5.2 ID=mRNA_P-wetherbeei_contig1610.5.2|Name=mRNA_P-wetherbeei_contig1610.5.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=627bp|location=Sequence derived from alignment at P-wetherbeei_contig1610:2297..6513- (Phaeothamnion wetherbeei SAG_119_79)
ATGTCGGCGGCGGCGGCGGATACTGCTGTCGCTTCTTCGGCGGCGGCGGC
GGTGGCGGTGGCGGCGGCCTCGCCGGCGCCGGCGATGAGGGCGGCTTTCT
CGGCAACGGGGCATGATGGCTTCGCCGCTTTCTCGCGTCGGAGAACACAG
GTGGCGCTGCTGGCGCATATCTACCTGCGGATGGACCGCGTTGATTTGGC
GCAGAAGCAGCTGCGGGTGATGCACGCCGCGGATGAGGACGCGGCGCTCA
CGCAGCTCACCACCGCGTGGGTGCACGTCGCCACCGGCGGGAAGCACTAC
AGGGAAGCGGCGTACATCTTCGACGAACTCATCGACAAGCACCAAGGCTC
CCCCCTGCTGCTCAATGGCCTCGCGATCGCCAAGATGCACATGGGTGAAT
TCAACGAGGCAGAGTCCGCGCTGGTGGAAGCCGCCAGCAAGAGCCAGGGG
GACGCTGACACGCTGATCAACCTGATATGCTGTTACCGGCACCTGGACAA
GCCGGCATCGTTCATCGACAGGTACTCGGCGCAGCTGCGTGCGGCGCACC
CGGCGCACCCGTACGTCGTCGGGCTGAACAATGTTGAGAGCGCGTTCGCG
CGGGTCGCGGCGACATTTGCCGCGTGA
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