prot_P-wetherbeei_contig16088.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig16088.1.1
Unique Nameprot_P-wetherbeei_contig16088.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length150
Homology
BLAST of mRNA_P-wetherbeei_contig16088.1.1 vs. uniprot
Match: A0A127EWV1_9HYPH (Nitrogen-fixing NifU domain-containing protein n=1 Tax=Rhodoplanes sp. Z2-YC6860 TaxID=674703 RepID=A0A127EWV1_9HYPH)

HSP 1 Score: 263 bits (672), Expect = 1.740e-88
Identity = 132/147 (89.80%), Postives = 136/147 (92.52%), Query Frame = 0
Query:    1 MLNDVYNRRILELAGGIPRLGRLERPDASATAHSKLCGSTVTVDLKMDGDTVIDFAHDVKACALGQASSSIMAIHVVGSKADELRALRDTVRKMLKENGEPPKDGKWADIAVLEPVRDYKARHASTMLTFDAVVDAIGQIETKRRAA 147
            MLN+VYNRRILELAGGIPRLGRL  PDASATAHSKLCGSTVTVDLKMDGDTV DFAH+VKACALGQASSSIMA HVVGSKA ELR LRDTVRKMLKENG PPKDGKWADIAVLEPVRDYKARHAST+LTFDAVVDAIGQIE +   A
Sbjct:    1 MLNEVYNRRILELAGGIPRLGRLSEPDASATAHSKLCGSTVTVDLKMDGDTVTDFAHEVKACALGQASSSIMASHVVGSKAAELRELRDTVRKMLKENGAPPKDGKWADIAVLEPVRDYKARHASTLLTFDAVVDAIGQIEKRNGKA 147          
BLAST of mRNA_P-wetherbeei_contig16088.1.1 vs. uniprot
Match: Q6N4E6_RHOPA (Possible nifU homolog n=8 Tax=Proteobacteria TaxID=1224 RepID=Q6N4E6_RHOPA)

HSP 1 Score: 252 bits (643), Expect = 4.890e-84
Identity = 126/147 (85.71%), Postives = 135/147 (91.84%), Query Frame = 0
Query:    1 MLNDVYNRRILELAGGIPRLGRLERPDASATAHSKLCGSTVTVDLKMDGDTVIDFAHDVKACALGQASSSIMAIHVVGSKADELRALRDTVRKMLKENGEPPKDGKWADIAVLEPVRDYKARHASTMLTFDAVVDAIGQIETKRRAA 147
            MLNDVYN+RI+ELAG IPR+GRLERPDASATAHSKLCGSTVT+DLKMDGDTV DFAH VKACALGQASSSIMA HVVGS A EL+ALR+TVRKMLKENG PP DGKWADIA+LEPVRDYKARHAST+LTFDAVVDAIGQIE +   A
Sbjct:    1 MLNDVYNKRIIELAGNIPRIGRLERPDASATAHSKLCGSTVTIDLKMDGDTVTDFAHIVKACALGQASSSIMASHVVGSTASELKALRETVRKMLKENGAPP-DGKWADIAMLEPVRDYKARHASTLLTFDAVVDAIGQIEAQNDGA 146          
BLAST of mRNA_P-wetherbeei_contig16088.1.1 vs. uniprot
Match: UPI001BAAD3B0 (iron-sulfur cluster assembly scaffold protein n=1 Tax=Rhodopseudomonas sp. SK50-23 TaxID=340268 RepID=UPI001BAAD3B0)

HSP 1 Score: 250 bits (639), Expect = 2.130e-83
Identity = 124/143 (86.71%), Postives = 129/143 (90.21%), Query Frame = 0
Query:    1 MLNDVYNRRILELAGGIPRLGRLERPDASATAHSKLCGSTVTVDLKMDGDTVIDFAHDVKACALGQASSSIMAIHVVGSKADELRALRDTVRKMLKENGEPPKDGKWADIAVLEPVRDYKARHASTMLTFDAVVDAIGQIETK 143
            MLND+YN+RI+ELAG IPRLGRL  PDASATAHSKLCGSTV VDL MDGD V DFAHDVKACALGQASSSIMA HVVGS ADELRALR+TVRKMLKENG PP D KWADIA LEPVRDYKARHAST+LTFDAVVDAIGQIE K
Sbjct:    1 MLNDIYNKRIIELAGNIPRLGRLTAPDASATAHSKLCGSTVKVDLAMDGDVVSDFAHDVKACALGQASSSIMAAHVVGSTADELRALRETVRKMLKENGAPPTDAKWADIAALEPVRDYKARHASTLLTFDAVVDAIGQIEAK 143          
BLAST of mRNA_P-wetherbeei_contig16088.1.1 vs. uniprot
Match: A0A0N1C6N2_9BRAD (Nitrogen fixation protein NifU n=3 Tax=Rhodopseudomonas TaxID=1073 RepID=A0A0N1C6N2_9BRAD)

HSP 1 Score: 250 bits (638), Expect = 2.830e-83
Identity = 124/148 (83.78%), Postives = 133/148 (89.86%), Query Frame = 0
Query:    1 MLNDVYNRRILELAGGIPRLGRLERPDASATAHSKLCGSTVTVDLKMDGDTVIDFAHDVKACALGQASSSIMAIHVVGSKADELRALRDTVRKMLKENGEPPKDGKWADIAVLEPVRDYKARHASTMLTFDAVVDAIGQIETKRRAAA 148
            MLND+YN+RI+ELAG IPRLGRL  PDA+ATAHSKLCGSTV VDLKMDGDTV DFAH+VKACALGQASSSIMA HVVGS A ELRALRD VR MLK++G PP DGKWADIAVLEPVRDYKARHAST+LTFDAVVDAIGQIE KR+  A
Sbjct:    1 MLNDIYNKRIIELAGNIPRLGRLPDPDATATAHSKLCGSTVKVDLKMDGDTVSDFAHEVKACALGQASSSIMASHVVGSTATELRALRDAVRAMLKDHGAPPADGKWADIAVLEPVRDYKARHASTLLTFDAVVDAIGQIEAKRQETA 148          
BLAST of mRNA_P-wetherbeei_contig16088.1.1 vs. uniprot
Match: A0A163ZQG2_9BRAD (Iron-sulfur cluster assembly scaffold protein n=14 Tax=Bradyrhizobiaceae TaxID=41294 RepID=A0A163ZQG2_9BRAD)

HSP 1 Score: 250 bits (638), Expect = 3.240e-83
Identity = 123/148 (83.11%), Postives = 131/148 (88.51%), Query Frame = 0
Query:    1 MLNDVYNRRILELAGGIPRLGRLERPDASATAHSKLCGSTVTVDLKMDGDTVIDFAHDVKACALGQASSSIMAIHVVGSKADELRALRDTVRKMLKENGEPPKDGKWADIAVLEPVRDYKARHASTMLTFDAVVDAIGQIETKRRAAA 148
            MLND+YN+RI+ELAG IPRLGRL  PDASATAHSKLCGSTV +DL MD D V DFAHDVKACALGQASSSIMA HVVGS A+ELRALR+TVRKMLKENG PP DGKWADIA+LEPVRDYKARHAST+LTFDAVVDAIGQIE K    A
Sbjct:    1 MLNDIYNKRIIELAGNIPRLGRLPAPDASATAHSKLCGSTVKIDLVMDADVVTDFAHDVKACALGQASSSIMASHVVGSTAEELRALRETVRKMLKENGAPPSDGKWADIALLEPVRDYKARHASTLLTFDAVVDAIGQIEAKSNTGA 148          
BLAST of mRNA_P-wetherbeei_contig16088.1.1 vs. uniprot
Match: A0A508STQ6_9BRAD (Iron-sulfur cluster assembly scaffold protein IscU n=8 Tax=Bradyrhizobium TaxID=374 RepID=A0A508STQ6_9BRAD)

HSP 1 Score: 249 bits (637), Expect = 3.760e-83
Identity = 123/148 (83.11%), Postives = 133/148 (89.86%), Query Frame = 0
Query:    1 MLNDVYNRRILELAGGIPRLGRLERPDASATAHSKLCGSTVTVDLKMDGDTVIDFAHDVKACALGQASSSIMAIHVVGSKADELRALRDTVRKMLKENGEPPKDGKWADIAVLEPVRDYKARHASTMLTFDAVVDAIGQIETKRRAAA 148
            MLND+YN+RI+ELAG IPRLGRL+ PDASATAHSKLCGSTV VDLKMDG  V DFAHDVKACALGQASSSIMA HVVGS ADELR LR+TVRKMLK+NG+PP  GKWADIA+LEPVRDYKARHAST+LTFDAVVDAIGQIE K +  A
Sbjct:    1 MLNDIYNKRIIELAGNIPRLGRLKDPDASATAHSKLCGSTVKVDLKMDGGVVTDFAHDVKACALGQASSSIMASHVVGSSADELRDLRETVRKMLKDNGQPPAGGKWADIALLEPVRDYKARHASTLLTFDAVVDAIGQIEAKAKQPA 148          
BLAST of mRNA_P-wetherbeei_contig16088.1.1 vs. uniprot
Match: A0A0S3PWN2_9BRAD (NifU_N domain-containing protein n=1 Tax=Variibacter gotjawalensis TaxID=1333996 RepID=A0A0S3PWN2_9BRAD)

HSP 1 Score: 249 bits (635), Expect = 7.330e-83
Identity = 122/146 (83.56%), Postives = 132/146 (90.41%), Query Frame = 0
Query:    1 MLNDVYNRRILELAGGIPRLGRLERPDASATAHSKLCGSTVTVDLKMDGDTVIDFAHDVKACALGQASSSIMAIHVVGSKADELRALRDTVRKMLKENGEPPKDGKWADIAVLEPVRDYKARHASTMLTFDAVVDAIGQIETKRRA 146
            MLND+YN +ILELAG IPR+GRLE PDASATAHSKLCGSTVT+DLKM+GD V DFAHDVKACALGQASSSIMA HVVG+KADELRALR+TVRKMLKENG PP  G+W DI VLEPVRDYKARHAST+LTFDAVV AI QIE KR+A
Sbjct:    1 MLNDIYNAKILELAGNIPRIGRLESPDASATAHSKLCGSTVTIDLKMNGDEVTDFAHDVKACALGQASSSIMARHVVGAKADELRALRETVRKMLKENGSPPDGGRWEDIRVLEPVRDYKARHASTLLTFDAVVSAIDQIEAKRKA 146          
BLAST of mRNA_P-wetherbeei_contig16088.1.1 vs. uniprot
Match: A0A6L5FGR2_9HYPH (Iron-sulfur cluster assembly scaffold protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6L5FGR2_9HYPH)

HSP 1 Score: 249 bits (635), Expect = 8.390e-83
Identity = 125/146 (85.62%), Postives = 131/146 (89.73%), Query Frame = 0
Query:    1 MLNDVYNRRILELAGGIPRLGRLERPDASATAHSKLCGSTVTVDLKMDGDTVIDFAHDVKACALGQASSSIMAIHVVGSKADELRALRDTVRKMLKENGEPPKDGKWADIAVLEPVRDYKARHASTMLTFDAVVDAIGQIETKRRA 146
            MLNDVYN RILELAG IPRLGRL  PDA+ATAHSKLCGSTVT+DLKMDGDTV DFAH VKACALGQASSSIMA HVVG+KA ELRALRD VRKMLKENG PP + +W DIAVLEPVRD+KARHASTMLTFDAVVDAI QIE KRRA
Sbjct:    1 MLNDVYNARILELAGNIPRLGRLAEPDATATAHSKLCGSTVTIDLKMDGDTVTDFAHAVKACALGQASSSIMARHVVGAKAGELRALRDGVRKMLKENGAPPANSEWGDIAVLEPVRDFKARHASTMLTFDAVVDAINQIEAKRRA 146          
BLAST of mRNA_P-wetherbeei_contig16088.1.1 vs. uniprot
Match: A0A363TG47_9BRAD (Iron-sulfur cluster assembly scaffold protein n=1 Tax=Bradyrhizobiaceae bacterium TaxID=2072420 RepID=A0A363TG47_9BRAD)

HSP 1 Score: 248 bits (634), Expect = 1.110e-82
Identity = 125/149 (83.89%), Postives = 133/149 (89.26%), Query Frame = 0
Query:    1 MLNDVYNRRILELAGGIPRLGRLERPDASATAHSKLCGSTVTVDLKMDGDTVIDFAHDVKACALGQASSSIMAIHVVGSKADELRALRDTVRKMLKENGEPPKDGKWADIAVLEPVRDYKARHASTMLTFDAVVDAIGQIETKRRAAAE 149
            MLNDVYNRRILELAG IPR+GRL   DA+ATAHSKLCGSTVTVDLKM GDTV DFAH+VKACALGQASSSIMA HVVGS A ELR LR+ VR+MLKENG PP +GKWADIAVLEPVRDYKARHAST+LTFDAVVDAIG+IE KR  AAE
Sbjct:    1 MLNDVYNRRILELAGSIPRIGRLADADATATAHSKLCGSTVTVDLKMSGDTVTDFAHEVKACALGQASSSIMARHVVGSTAGELRQLREDVRRMLKENGPPPAEGKWADIAVLEPVRDYKARHASTLLTFDAVVDAIGRIEEKRAVAAE 149          
BLAST of mRNA_P-wetherbeei_contig16088.1.1 vs. uniprot
Match: A0A371BD80_9HYPH (Iron-sulfur cluster assembly scaffold protein n=2 Tax=unclassified Pseudolabrys TaxID=2638514 RepID=A0A371BD80_9HYPH)

HSP 1 Score: 248 bits (632), Expect = 2.250e-82
Identity = 120/149 (80.54%), Postives = 134/149 (89.93%), Query Frame = 0
Query:    1 MLNDVYNRRILELAGGIPRLGRLERPDASATAHSKLCGSTVTVDLKMDGDTVIDFAHDVKACALGQASSSIMAIHVVGSKADELRALRDTVRKMLKENGEPPKDGKWADIAVLEPVRDYKARHASTMLTFDAVVDAIGQIETKRRAAAE 149
            MLNDVYN +IL LAG IPRLGRLE+PDA+ATAHSKLCGSTVT+DL +DGD V DFAHDVKACALGQASSSIMA H++GS + ELRALR+TVRKMLKENG PPKDGKWA+IA LEPVRDYKARHAST+LTFDAVV A+ +IE KR+ AAE
Sbjct:    1 MLNDVYNEKILNLAGNIPRLGRLEKPDATATAHSKLCGSTVTIDLTLDGDHVTDFAHDVKACALGQASSSIMARHIIGSTSAELRALRETVRKMLKENGAPPKDGKWAEIAYLEPVRDYKARHASTLLTFDAVVKAVDEIEAKRKQAAE 149          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16088.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A127EWV1_9HYPH1.740e-8889.80Nitrogen-fixing NifU domain-containing protein n=1... [more]
Q6N4E6_RHOPA4.890e-8485.71Possible nifU homolog n=8 Tax=Proteobacteria TaxID... [more]
UPI001BAAD3B02.130e-8386.71iron-sulfur cluster assembly scaffold protein n=1 ... [more]
A0A0N1C6N2_9BRAD2.830e-8383.78Nitrogen fixation protein NifU n=3 Tax=Rhodopseudo... [more]
A0A163ZQG2_9BRAD3.240e-8383.11Iron-sulfur cluster assembly scaffold protein n=14... [more]
A0A508STQ6_9BRAD3.760e-8383.11Iron-sulfur cluster assembly scaffold protein IscU... [more]
A0A0S3PWN2_9BRAD7.330e-8383.56NifU_N domain-containing protein n=1 Tax=Variibact... [more]
A0A6L5FGR2_9HYPH8.390e-8385.62Iron-sulfur cluster assembly scaffold protein n=1 ... [more]
A0A363TG47_9BRAD1.110e-8283.89Iron-sulfur cluster assembly scaffold protein n=1 ... [more]
A0A371BD80_9HYPH2.250e-8280.54Iron-sulfur cluster assembly scaffold protein n=2 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002871NIF system FeS cluster assembly, NifU, N-terminalPFAMPF01592NifU_Ncoord: 19..124
e-value: 5.9E-9
score: 36.1
IPR002871NIF system FeS cluster assembly, NifU, N-terminalCDDcd06664IscU_likecoord: 6..136
e-value: 8.30971E-33
score: 110.802
NoneNo IPR availableGENE3D3.90.1010.10coord: 1..147
e-value: 1.3E-27
score: 98.3
NoneNo IPR availableSUPERFAMILY82649SufE/NifUcoord: 1..143

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig16088contigP-wetherbeei_contig16088:52..501 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig16088.1.1mRNA_P-wetherbeei_contig16088.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig16088 52..501 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig16088.1.1 ID=prot_P-wetherbeei_contig16088.1.1|Name=mRNA_P-wetherbeei_contig16088.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=150bp
MLNDVYNRRILELAGGIPRLGRLERPDASATAHSKLCGSTVTVDLKMDGD
TVIDFAHDVKACALGQASSSIMAIHVVGSKADELRALRDTVRKMLKENGE
PPKDGKWADIAVLEPVRDYKARHASTMLTFDAVVDAIGQIETKRRAAAE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002871NIF_FeS_clus_asmbl_NifU_N