prot_P-wetherbeei_contig16074.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig16074.1.1
Unique Nameprot_P-wetherbeei_contig16074.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length296
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16074.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 208..280
e-value: 5.8E-5
score: 25.0
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 63..205
e-value: 8.6E-9
score: 37.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 65..87
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..23
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 38..87
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 9..23
NoneNo IPR availableCDDcd00590RRM_SFcoord: 1..51
e-value: 0.00171199
score: 34.5881
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 133..279

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig16074contigP-wetherbeei_contig16074:29..1469 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig16074.1.1mRNA_P-wetherbeei_contig16074.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig16074 13..1469 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig16074.1.1 ID=prot_P-wetherbeei_contig16074.1.1|Name=mRNA_P-wetherbeei_contig16074.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=296bp
MSSFGRVRSVEPPDDRHRATRPWIINFRDSSGAALALAKGDTKPLRQQTL
QFRQDLGGGPPPSLQLDRDRDRDRDRDRDRDRERERDREFDRERERDRDR
ERERDGRSDRDGGLFINGVQQDVERSVAIFGAAPDAKVPSMERTMGAFGE
VADVVPPKNRGSTAPWIVYFKTLEAAEAALEATGEVTLDGRRLETRLNAD
ARHAPPPDVARRTVAVFGFEDGREEDLLKHMSQGGPIKVVIPPSSRKRPW
LVKYTDAADARRAASQLDHTTVGRHLITMRLDAGLDQARAREESKR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012677Nucleotide-bd_a/b_plait_sf
IPR035979RBD_domain_sf