mRNA_P-wetherbeei_contig16057.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig16057.1.1
Unique NamemRNA_P-wetherbeei_contig16057.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig16057.1.1 vs. uniprot
Match: A0A7V8ZNB7_9BURK (Helix-turn-helix transcriptional regulator n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=A0A7V8ZNB7_9BURK)

HSP 1 Score: 274 bits (700), Expect = 1.010e-86
Identity = 152/328 (46.34%), Postives = 204/328 (62.20%), Query Frame = 1
Query:   10 VRLQYDWTPAPGEAHVLDAVLFRVLHEIADCGSLAESARRLGVSYRHVWGLVGKWDGIFGRPVIELRQGHGARLTEFGRKLLWSEELVQARISHELEKVRHEIEHALAG--DQGEMPLAIAASHDLALAELRDRLAQRTGL-KLDIRFEGSLESLAALAEGRRTLAGFHLAEGLDEA--AAQAFHRFLRDDTHTLIGVATRTQGLMVAPGNPGHILSLADLTRPAVRIVNRQAGSGSRVEFDQLLAGAGIEPGTLDGYQNEEYTHLAVAATVAGGRADAGYGIRAAAAEYKLDFIPLLTERYFLACRTDGLAAPAVAAFVGMLQGAEF 978
            V   Y W P        D +LF  L  I + GS+   AR +G+SYRHVWG++ KW  +   P++ + +G G RLT FG KLLW+E+ V AR++ +LE +  E+E       + G   L + ASHDLAL++LRD + +  G  +LD+ F GS ESLA+L  G   LAGFH++E   +A  A  A+ R+LR  T  L+    R QGL+VA GNP  I  + DLTR  VR VNRQ GSG+R+  DQLL    I+   ++GY NEE+THLAVAAT+A G A+AG GI+AAA+ Y LDFIPL+ ERYFLA R +   +PA  + +  L+  EF
Sbjct:    4 VEFNYSWLPGQTRRKQQDELLFNALRAIHNTGSVQHGAREIGLSYRHVWGMLIKWQAMLNEPLVTMERGRGTRLTPFGEKLLWAEQRVNARLAPQLESLAAELEREFQTVLNSGAETLRVHASHDLALSQLRDLVNRDDGSPRLDVSFMGSQESLASLVRGHCDLAGFHVSEQESKATLAHLAYRRWLRPRTQLLVHFVGRQQGLIVARGNPLKIRGVKDLTRSRVRFVNRQGGSGTRLLLDQLLWDGEIDKARINGYDNEEFTHLAVAATIASGGANAGIGIKAAASRYNLDFIPLVNERYFLAVRKESTHSPAFKSLLAALKSGEF 331          
BLAST of mRNA_P-wetherbeei_contig16057.1.1 vs. uniprot
Match: UPI0019AF0044 (Helix-turn-helix transcriptional regulator n=1 Tax=Prolixibacteraceae bacterium TaxID=2053594 RepID=UPI0019AF0044)

HSP 1 Score: 264 bits (674), Expect = 6.140e-83
Identity = 143/327 (43.73%), Postives = 200/327 (61.16%), Query Frame = 1
Query:    7 KVRLQYDWTPAPGEAHVLDAVLFRVLHEIADCGSLAESARRLGVSYRHVWGLVGKWDGIFGRPVIELRQGHGARLTEFGRKLLWSEELVQARISHELEKVRHEIEHALAG--DQGEMPLAIAASHDLALAELRDRLAQRTGLKLDIRFEGSLESLAALAEGRRTLAGFHLAEG-LDEAAAQAFHRFLRDDTHTLIGVATRTQGLMVAPGNPGHILSLADLTRPAVRIVNRQAGSGSRVEFDQLLAGAGIEPGTLDGYQNEEYTHLAVAATVAGGRADAGYGIRAAAAEYKLDFIPLLTERYFLACRTDGLAAPAVAAFVGMLQGAEF 978
            K+ ++  W  +      LD  LF VL  I D G L  +A ++G+SYRH W L+G+W   FG P++ L +G G  LT  G KLLW+E+ + AR++ +LE +  E+   ++         L I ASH  A+A+L + L   + ++LD+R+ G+ ESLA++A G     GFH+ EG L E A   + ++L  D   LI + TRTQGL +A GNP +I SLADL RP V  +NRQ GSG+R+  DQLL  AG++   LDGYQ EE+TH A+AA VA G ADAG+G+  AA ++ LDF+PL  ERYFL CR + L  P     + +L+G  F
Sbjct:    3 KIVVRPAWLVSNEAGEELDQQLFPVLQAIHDAGKLTVAAAKVGLSYRHAWNLIGRWSEFFGSPLVTLERGRGTTLTPLGEKLLWAEQRINARLAPQLESLASELNLEISKLVTTARSALRIHASHGFAVAKLPELLRAHSQIQLDLRYLGAQESLASVARGACNFGGFHVPEGKLGELALAQYAKWLLPDKQKLIHLVTRTQGLFLARGNPKNIRSLADLGRPGVVFINRQRGSGTRLLIDQLLEDAGVDYQRLDGYQTEEFTHAAIAAYVASGMADAGFGVEPAARQFALDFLPLAKERYFLICRDESLDLPESRELIRLLRGQAF 329          
BLAST of mRNA_P-wetherbeei_contig16057.1.1 vs. uniprot
Match: A0A4U8V4Q3_9BURK (LysR family transcriptional regulator n=1 Tax=Burkholderiaceae bacterium PBA TaxID=795666 RepID=A0A4U8V4Q3_9BURK)

HSP 1 Score: 264 bits (674), Expect = 7.150e-83
Identity = 145/326 (44.48%), Postives = 198/326 (60.74%), Query Frame = 1
Query:   10 VRLQYDWTPAPGEAHVLDAVLFRVLHEIADCGSLAESARRLGVSYRHVWGLVGKWDGIFGRPVIELRQGHGARLTEFGRKLLWSEELVQARISHELEKVRHEIEHAL--AGDQGEMPLAIAASHDLALAELRDRLAQRTGLKLDIRFEGSLESLAALAEGRRTLAGFHLAEGLDEAAAQA-FHRFLRDDTHTLIGVATRTQGLMVAPGNPGHILSLADLTRPAVRIVNRQAGSGSRVEFDQLLAGAGIEPGTLDGYQNEEYTHLAVAATVAGGRADAGYGIRAAAAEYKLDFIPLLTERYFLACRTDGLAAPAVAAFVGMLQGAEF 978
            + ++  W         LD +LFR+L  I D G L ESA R+G SYRH W L+ +W   FG P++EL +G GARLT  G KL W+ E VQAR+  +LE +  E++  +  A    +  L + ASH  A+A L D  AQ    +L++++ GSL+++A++A G   L GFHL   L         H+FL+  +H L+ + TRTQGL +  GNP  + SL DLTRP VR VNRQ  SG+R+  D LL   GI    + GY+  E+TH AVAA VA G A+ G+G+ AAA+ +KLDF+P+  E Y LACRTD L  PA+   +GML+G EF
Sbjct:    6 ITVEPGWRLRNTAGQELDPLLFRILQAINDTGKLTESAVRVGYSYRHCWNLIHQWSAFFGVPLVELSKGKGARLTPLGEKLAWAAERVQARLGPQLENLAVELDREINVAISDSKPTLRLHASHGYAVALLPDLFAQIGTARLELQYLGSLDAMASMARGNCELCGFHLPLNLPCGELMTRVHKFLKPRSHRLVRLVTRTQGLYLGQGNPAGVHSLGDLTRPEVRFVNRQHNSGTRILLDLLLEHGGIASQHITGYEQVEFTHAAVAAFVASGMANVGFGVEAAASRFKLDFLPVAKEAYMLACRTDTLEQPAMQQLLGMLRGPEF 331          
BLAST of mRNA_P-wetherbeei_contig16057.1.1 vs. uniprot
Match: A0A5C7EJX3_9PROT (LysR family transcriptional regulator n=3 Tax=Proteobacteria TaxID=1224 RepID=A0A5C7EJX3_9PROT)

HSP 1 Score: 265 bits (677), Expect = 1.370e-82
Identity = 152/329 (46.20%), Postives = 208/329 (63.22%), Query Frame = 1
Query:    4 IKVRLQYDWTPAPGEAHVLDAVLFRVLHEIADCGSLAESARRLGVSYRHVWGLVGKWDGIFGRPVIELRQGHGARLTEFGRKLLWSEELVQARISHELEKVRHEIEHAL--AGDQGEMP--LAIAASHDLALAELRDRLAQRTGLKLDIRFEGSLESLAALAEGRRTLAGFHLAEGLDEAAAQAFHRFLRDDTHTLIGVATRTQGLMVAPGNPGHILSLADLTRPAVRIVNRQAGSGSRVEFDQLLAGAGIEPGTLDGYQNEEYTHLAVAATVAGGRADAGYGIRAAAAEYKLDFIPLLTERYFLACRTDGLAAPAVAAFVGMLQGAEF 978
            + V L       PGE   +DA +FR+L  + D G+++ +A+ L +SYRH WGL+ +     G P++ + +G GARL+  G +LL + E  + R+  +L  +  E+E AL  AG  G     LA+ ASHDLALA LRD L QRTG  L++ F GSL+S+ AL  G+  +AGFH  + +D AAA A  R L+  +H  +  A R QGLMV  GNP  I  LADLTRP V+ +NRQ  SG+R+  D+LL+ AGI P  + GY+ EE+THLAVAA+VAGG ADAG+GI+AAA +  L F+PL+ ERY LA       +PA+ A V +L+  EF
Sbjct:   57 VSVELCVSMETNPGER--VDAQIFRLLRAVRDWGTVSRAAQELKLSYRHAWGLIERAGVALGEPLVIMERGRGARLSALGARLLSAHERAENRLRAQLTAIADELEQALHPAGRAGRATGRLAVRASHDLALARLRDLLFQRTGHILELEFCGSLQSVEALGRGQCQMAGFHWMDPIDGAAAAAIARHLKPRSHLALHFAWRQQGLMVRAGNPKRIRGLADLTRPEVKFINRQRASGTRLLLDRLLSQAGIAPTAIAGYEEEEFTHLAVAASVAGGLADAGFGIQAAAHQLGLHFVPLVRERYLLAMTRQTFRSPALQALVALLRSPEF 383          
BLAST of mRNA_P-wetherbeei_contig16057.1.1 vs. uniprot
Match: UPI000473FAB5 (helix-turn-helix transcriptional regulator n=1 Tax=Herminiimonas sp. CN TaxID=1349818 RepID=UPI000473FAB5)

HSP 1 Score: 262 bits (669), Expect = 5.810e-82
Identity = 144/326 (44.17%), Postives = 206/326 (63.19%), Query Frame = 1
Query:    1 LIKVRLQYDWTPAPGEAHVLDAVLFRVLHEIADCGSLAESARRLGVSYRHVWGLVGKWDGIFGRPVIELRQGHGARLTEFGRKLLWSEELVQARISHELEKVRHEIEH--ALAGDQGEMPLAIAASHDLALAELRDRLAQRTGLKLDIRFEGSLESLAALAEGRRTLAGFHLAEGLDEAAA--QAFHRFLRDDTHTLIGVATRTQGLMVAPGNPGHILSLADLTRPAVRIVNRQAGSGSRVEFDQLLAGAGIEPGTLDGYQNEEYTHLAVAATVAGGRADAGYGIRAAAAEYKLDFIPLLTERYFLACRTDGLAAPAVAAFVGMLQ 966
            ++ ++L Y ++  P   + L   LF +L  I   GS++++A+ L +SYRHVWG +  W+   G  +I   +G  ARLT FG KLL++E+  +AR+  ++E +  ++E   ALA D+    +++ ASHDL L  LRD +A    L LD++F GS++SL ALA G   LAGFH++E         Q F + L+   H LI    R QGLMVA GNP  I  + DL RP VR +NR+ GSG+R+E +QLLA   I+P T++G++  E THLAVAA VA G ADAG+GIRAAA ++ LDFIPL+ E+Y+LAC  + L  PA+   + +LQ
Sbjct:    1 MLHLKLDYTFSATPVARNHLGNPLFEILAAIHRTGSISKTAQALELSYRHVWGALKNWEQTLGAEIIVWERGKRARLTPFGEKLLFAEQRAKARVLPQIENLIADMEREFALAFDRNAYVISLFASHDLVLNRLRDFMASDAKLHLDLQFRGSIDSLGALARGECLLAGFHISEDRARGTLTQQTFKKLLKPGKHKLITFLGRQQGLMVAAGNPKKIGGMGDLQRPGVRFINRETGSGTRLEIEQLLAAGKIDPATVNGFERCEATHLAVAAAVASGHADAGFGIRAAAMQFGLDFIPLMQEQYYLACLKETLREPAIEKLLALLQ 326          
BLAST of mRNA_P-wetherbeei_contig16057.1.1 vs. uniprot
Match: A0A6N9RG59_9BURK (Helix-turn-helix transcriptional regulator n=2 Tax=Polaromonas TaxID=52972 RepID=A0A6N9RG59_9BURK)

HSP 1 Score: 260 bits (665), Expect = 1.830e-81
Identity = 149/328 (45.43%), Postives = 205/328 (62.50%), Query Frame = 1
Query:    7 KVRLQYDWTPAPGEAHVLDAVLFRVLHEIADCGSLAESARRLGVSYRHVWGLVGKWDGIFGRPVIELRQGHGARLTEFGRKLLWSEELVQARISHELEKVRHEIEHAL--AGDQGEMPLAIAASHDLALAELRDRLAQRTGLKLDIRFEGSLESLAALAEGRRTLAGFHLAE--GLDEAAAQAFHRFLRDDTHTLIGVATRTQGLMVAPGNPGHILSLADLTRPAVRIVNRQAGSGSRVEFDQLLAGAGIEPGTLDGYQNEEYTHLAVAATVAGGRADAGYGIRAAAAEYKLDFIPLLTERYFLACRTDGLAAPAVAAFVGMLQGAEF 978
            KV L Y  +P  G+  ++   +  +LH +++ GS++++A+ L  SYRHVWG +  W+   GR +I   +G  ARLTEFG KLLW+E   QAR++ ++E +R +IE A   A D     L + ASHD AL+ LRD+ +   GL LDIRF GS++++AAL +GR  +AGFH+ +      AAA+ +   L+   H LIG A R QGL+VA  NP  I SLADLT+P++R VNR  G+G+RV  D LLA AG+ P  + GY ++E +H AVA  +A G ADAG GI AAA E  L F+PL+ ERY L C    L  P V A +  LQ  E+
Sbjct:    3 KVELSYLLSPQRGKDALIRNPMMDILHAVSEQGSISKAAKALDFSYRHVWGALKDWEQTLGRSLIVWDKGQRARLTEFGEKLLWAERQAQARLAPQIEALRGDIERAFSTAFDDNAHVLTLFASHDAALSALRDQTSAH-GLHLDIRFMGSVDAMAALNDGRCMMAGFHVRDQPARHSAAARNYRSLLKPGLHKLIGFAHRQQGLIVAKNNPLQIESLADLTQPSMRYVNRSEGTGTRVLLDDLLAEAGLTPSAIHGYDSQEPSHTAVAQAIASGAADAGLGIEAAAREKGLGFVPLVRERYHLVCLKSELPTPQVQALIRELQSDEW 329          
BLAST of mRNA_P-wetherbeei_contig16057.1.1 vs. uniprot
Match: UPI00190AB14F (helix-turn-helix transcriptional regulator n=1 Tax=Noviherbaspirillum pedocola TaxID=2801341 RepID=UPI00190AB14F)

HSP 1 Score: 260 bits (664), Expect = 2.740e-81
Identity = 149/326 (45.71%), Postives = 202/326 (61.96%), Query Frame = 1
Query:    1 LIKVRLQYDWTPAPGEAHVLDAVLFRVLHEIADCGSLAESARRLGVSYRHVWGLVGKWDGIFGRPVIELRQGHGARLTEFGRKLLWSEELVQARISHELEKVRHEIEH--ALAGDQGEMPLAIAASHDLALAELRDRLAQRTGLKLDIRFEGSLESLAALAEGRRTLAGFHLAEGLDEAAA--QAFHRFLRDDTHTLIGVATRTQGLMVAPGNPGHILSLADLTRPAVRIVNRQAGSGSRVEFDQLLAGAGIEPGTLDGYQNEEYTHLAVAATVAGGRADAGYGIRAAAAEYKLDFIPLLTERYFLACRTDGLAAPAVAAFVGMLQ 966
            ++ +RL Y +   PG    LD  LF +L  +   GS+ E+AR L +SYRHVWG + KW+   G+ ++   +G  ARL+ FG KLL++EE  +AR    +  +  E+E   ALA D G   L++ ASHD+AL  L+D  A+  GL LD+RF GS ++L AL+ G   +AG H+ E     +   + F R L+   H LI    R QGLMVAPGNP  I S+ DL R  VR VNRQ GSG+R+E DQ+L  AGI P  ++GY+  E THLAVAA VA   AD G+GIRAAAA Y L+FIP++ E+Y+LAC  + L  PAV   + +L+
Sbjct:    1 MLHIRLAYAFDAQPGAKRQLDNPLFAILSAVHRSGSVGEAARELELSYRHVWGALKKWEDELGQELLLWNRGKRARLSLFGEKLLYAEERARARAQPLVANLVAEMEREFALAFDPGVHVLSLYASHDIALTRLKDFTAKEGGLHLDMRFCGSTDALNALSRGECMMAGLHVGEDRAPGSLTQRTFKRLLKPGLHKLISFVGREQGLMVAPGNPLRISSVDDLKRAKVRFVNRQNGSGTRIEIDQMLERAGIAPSAVNGYERMEATHLAVAAAVASNGADVGFGIRAAAAAYGLNFIPMMREQYYLACLKESLEQPAVKRLMELLR 326          
BLAST of mRNA_P-wetherbeei_contig16057.1.1 vs. uniprot
Match: UPI00124AF3CD (helix-turn-helix transcriptional regulator n=1 Tax=Lacisediminimonas profundi TaxID=2603856 RepID=UPI00124AF3CD)

HSP 1 Score: 259 bits (663), Expect = 4.370e-81
Identity = 144/332 (43.37%), Postives = 208/332 (62.65%), Query Frame = 1
Query:    1 LIKVRLQYDWTPAPGEAHVLDAVLFRVLHEIADCGSLAESARRLGVSYRHVWGLVGKWDGIFGRPVIELRQGHGARLTEFGRKLLWSEELVQARISHELEKVRHEIEH--ALAGDQGEMPLAIAASHDLALAELRDRLAQRTGLKLDIRFEGSLESLAALAEGRRTLAGFHLAEGLDEAAA----QAFHRFLRDDTHTLIGVATRTQGLMVAPGNPGHILSLADLTRPAVRIVNRQAGSGSRVEFDQLLAGAGIEPGTLDGYQNEEYTHLAVAATVAGGRADAGYGIRAAAAEYKLDFIPLLTERYFLACRTDGLAAPAVAAFVGMLQGAEF 978
            ++ V+L Y +T  P +   L+  LF +L  I   GS+A++A+RLG+SYRHVWG +  W+   G  +I   +G  ARL+ FG KLL++E+  + R+  ++E +  EIE   ALA D+G   +++ ASHDLAL  L+D +AQ+  L LD++F GS+E +  L+ G   LAGFH++E  D A      + F + L+   H LI    R QGLMV+ GNP +I  + DL RP +R VNRQ GSG+RVE +Q+L   GI   +++GY   E  HL+VAA +A GRAD G GIRAAA ++ LDFIPL+ E+Y+ AC  D L  P++   + +L   E+
Sbjct:    1 MLHVKLGYTFTQTPSDKPQLENPLFDMLSAIHSTGSVAQAAQRLGLSYRHVWGAIKNWESTLGSELIVWERGKRARLSGFGEKLLFAEQRAKTRVMPQIENLVAEIEREFALAFDRGAHVVSVFASHDLALPRLKDFMAQQEKLHLDLQFRGSIECIEGLSRGECLLAGFHISE--DRAPGTLTQKIFKQLLKPGKHKLINFLAREQGLMVSRGNPKNIRGVPDLVRPELRFVNRQPGSGTRVEIEQMLVQHGIAASSVNGYDQVEPNHLSVAAAIASGRADTGIGIRAAATQFGLDFIPLVREQYYFACLKDTLKEPSIVKLLELLARDEW 330          
BLAST of mRNA_P-wetherbeei_contig16057.1.1 vs. uniprot
Match: A0A109C8Z4_9BURK (Periplasmic molybdate-binding domain n=7 Tax=unclassified Variovorax TaxID=663243 RepID=A0A109C8Z4_9BURK)

HSP 1 Score: 257 bits (656), Expect = 3.890e-80
Identity = 143/326 (43.87%), Postives = 202/326 (61.96%), Query Frame = 1
Query:    7 KVRLQYDWTPAPGEAHVLDAVLFRVLHEIADCGSLAESARRLGVSYRHVWGLVGKWDGIFGRPVIELRQGHGARLTEFGRKLLWSEELVQARISHELEKVRHEIEHA--LAGDQGEMPLAIAASHDLALAELRDRLAQRTGLKLDIRFEGSLESLAALAEGRRTLAGFHLAEG--LDEAAAQAFHRFLRDDTHTLIGVATRTQGLMVAPGNPGHILSLADLTRPAVRIVNRQAGSGSRVEFDQLLAGAGIEPGTLDGYQNEEYTHLAVAATVAGGRADAGYGIRAAAAEYKLDFIPLLTERYFLACRTDGLAAPAVAAFVGMLQGA 972
            ++ L Y   P      ++   L  +LH + + GS++ +AR LG+SYRHVWG + +W+   G P++   QG  A+L+EFG KLLW+E   QAR++ ++E +  ++E A  +A D G   L++ ASHD AL  LR   A+R  L+LDIRF GSL++++AL +GR  +AGFH  E       A + +   L+   H LIG A RTQGL+VAPGNP  + SL D+ R   R VNR  G+G+RV  D+LL   G+ P  L+G+  +E +H AVA  VA G+ADAG GI +AA   +LDF+PL+ ERY LAC    L  PAV A + +L+ A
Sbjct:    3 QIELSYAIAPRRSGRTLIRNPLMELLHAVREHGSISAAARALGLSYRHVWGELKRWEQALGHPLVSGEQGRSAQLSEFGDKLLWAERQAQARLAPQIEALHADLERAFAMAFDDGLHVLSLHASHDDALVLLRAHAAERARLQLDIRFTGSLDAISALNQGRCVMAGFHTLERPPAGSLAQRTYKPLLKPGLHKLIGFARRTQGLIVAPGNPLGLRSLGDVARRRARYVNRALGTGTRVLLDELLGQEGLGPDALEGHARDEPSHTAVAHAVASGQADAGLGIESAARAARLDFVPLVDERYHLACLKSALDQPAVEALLALLRSA 328          
BLAST of mRNA_P-wetherbeei_contig16057.1.1 vs. uniprot
Match: UPI001C2CAB71 (LysR family transcriptional regulator n=2 Tax=Noviherbaspirillum TaxID=1344552 RepID=UPI001C2CAB71)

HSP 1 Score: 257 bits (657), Expect = 4.980e-80
Identity = 148/318 (46.54%), Postives = 200/318 (62.89%), Query Frame = 1
Query:    1 LIKVRLQYDWTPAPGEAHVLDAVLFRVLHEIADCGSLAESARRLGVSYRHVWGLVGKWDGIFGRPVIELRQGHGARLTEFGRKLLWSEELVQARISHELEKVRH--EIEHALAGDQGEMPLAIAASHDLALAELRDRLAQRTGLKLDIRFEGSLESLAALAEGRRTLAGFHLAEGLDEAAA--QAFHRFLRDDTHTLIGVATRTQGLMVAPGNPGHILSLADLTRPAVRIVNRQAGSGSRVEFDQLLAGAGIEPGTLDGYQNEEYTHLAVAATVAGGRADAGYGIRAAAAEYKLDFIPLLTERYFLACRTDGLAAPAV 942
            ++++++ Y      G    LD  LF +L  I   GS+A++A+RLG+SYRHVWG + KW+   G  ++   QG GARL+ FG KLL++E+  +AR   ELE +R   E E ALA D     L++ ASHDLAL+ L+    +   L L++ F  S+ES+ A++ G   LAGFH++E     +   +AF + L+   H LI   TR QG+MVA GNP  I  LADL R  VR +NRQ GSG+R+E DQ+LA  GI+ G++ GY N E THLAVAA VA G AD G GI AAAA++ LDFIPL  E+Y+ AC  + L  PAV
Sbjct:    1 MLRIKMAYTLVQETGTQAQLDNPLFDMLAAIHQTGSVAQAAQRLGLSYRHVWGALRKWESQLGSDLVVWNQGRGARLSGFGEKLLFAEQRAKARALPELENLRAGMEREFALAFDPEVHVLSLHASHDLALSRLKQYTEREARLHLNLHFCPSMESIEAMSCGECLLAGFHVSEDRAPGSLTQKAFKKLLKPGRHKLINFLTRQQGMMVAAGNPMRIAGLADLKRAGVRFINRQPGSGTRLEIDQMLAREGIDSGSVMGYDNTETTHLAVAAAVASGAADVGIGIEAAAAQFGLDFIPLGREQYYFACLKETLDTPAV 318          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16057.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7V8ZNB7_9BURK1.010e-8646.34Helix-turn-helix transcriptional regulator n=1 Tax... [more]
UPI0019AF00446.140e-8343.73Helix-turn-helix transcriptional regulator n=1 Tax... [more]
A0A4U8V4Q3_9BURK7.150e-8344.48LysR family transcriptional regulator n=1 Tax=Burk... [more]
A0A5C7EJX3_9PROT1.370e-8246.20LysR family transcriptional regulator n=3 Tax=Prot... [more]
UPI000473FAB55.810e-8244.17helix-turn-helix transcriptional regulator n=1 Tax... [more]
A0A6N9RG59_9BURK1.830e-8145.43Helix-turn-helix transcriptional regulator n=2 Tax... [more]
UPI00190AB14F2.740e-8145.71helix-turn-helix transcriptional regulator n=1 Tax... [more]
UPI00124AF3CD4.370e-8143.37helix-turn-helix transcriptional regulator n=1 Tax... [more]
A0A109C8Z4_9BURK3.890e-8043.87Periplasmic molybdate-binding domain n=7 Tax=uncla... [more]
UPI001C2CAB714.980e-8046.54LysR family transcriptional regulator n=2 Tax=Novi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig16057contigP-wetherbeei_contig16057:1..978 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog795666.MW7_2878
PFAMsHTH_1,PBP_like
Model size978
Max annot lvl28216|Betaproteobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.17e-83
EggNOG OGsCOG1910@1|root,COG2005@1|root,COG1910@2|Bacteria,COG2005@2|Bacteria,1MVS4@1224|Proteobacteria,2VH5J@28216|Betaproteobacteria,1K2CG@119060|Burkholderiaceae
Descriptionregulatory protein LysR
Cds size978
COG categoryP
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186075.6282568-CDS-P-wetherbeei_contig16057:0..9781683186075.6282568-CDS-P-wetherbeei_contig16057:0..978Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig16057 1..978 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig16057.1.1prot_P-wetherbeei_contig16057.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig16057 1..978 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig16057.1.1

>prot_P-wetherbeei_contig16057.1.1 ID=prot_P-wetherbeei_contig16057.1.1|Name=mRNA_P-wetherbeei_contig16057.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=326bp
LIKVRLQYDWTPAPGEAHVLDAVLFRVLHEIADCGSLAESARRLGVSYRH
VWGLVGKWDGIFGRPVIELRQGHGARLTEFGRKLLWSEELVQARISHELE
KVRHEIEHALAGDQGEMPLAIAASHDLALAELRDRLAQRTGLKLDIRFEG
SLESLAALAEGRRTLAGFHLAEGLDEAAAQAFHRFLRDDTHTLIGVATRT
QGLMVAPGNPGHILSLADLTRPAVRIVNRQAGSGSRVEFDQLLAGAGIEP
GTLDGYQNEEYTHLAVAATVAGGRADAGYGIRAAAAEYKLDFIPLLTERY
FLACRTDGLAAPAVAAFVGMLQGAEF
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mRNA from alignment at P-wetherbeei_contig16057:1..978-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig16057.1.1 ID=mRNA_P-wetherbeei_contig16057.1.1|Name=mRNA_P-wetherbeei_contig16057.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=978bp|location=Sequence derived from alignment at P-wetherbeei_contig16057:1..978- (Phaeothamnion wetherbeei SAG_119_79)
TTGATCAAGGTCCGCCTGCAGTACGACTGGACGCCGGCACCAGGCGAGGC GCATGTCCTCGACGCAGTGCTGTTCCGCGTGCTGCACGAGATCGCCGACT GCGGTTCGCTCGCGGAGTCCGCCCGCCGGCTCGGCGTTTCATACCGTCAT GTCTGGGGCCTGGTCGGCAAATGGGACGGGATCTTCGGCCGGCCGGTGAT CGAACTGCGCCAGGGCCACGGCGCGCGGCTGACCGAGTTCGGCCGCAAGC TCCTCTGGTCCGAGGAACTGGTGCAGGCCCGCATCTCGCATGAACTCGAG AAGGTGCGGCACGAAATCGAGCACGCGCTGGCCGGCGACCAGGGCGAAAT GCCCCTGGCGATCGCGGCCAGCCACGACCTGGCGCTTGCGGAACTGCGCG ACCGCCTCGCGCAACGCACGGGCCTAAAGCTCGACATCCGCTTCGAAGGC AGCCTCGAGAGCCTGGCGGCGCTCGCCGAAGGCCGTCGCACCCTGGCCGG CTTCCACCTCGCCGAGGGCCTCGACGAAGCGGCGGCCCAGGCCTTCCACC GGTTCCTCAGGGACGACACCCACACCCTCATTGGCGTCGCGACGCGTACG CAGGGGCTCATGGTCGCGCCCGGCAACCCCGGGCACATCCTCAGCCTCGC CGACCTGACGCGACCCGCCGTGCGGATCGTCAACCGGCAGGCCGGTTCGG GCAGCCGCGTGGAGTTCGACCAGTTGCTGGCCGGCGCCGGCATCGAGCCC GGGACGCTCGACGGGTACCAGAACGAGGAGTACACCCACCTCGCCGTGGC CGCGACCGTGGCGGGCGGGCGCGCGGACGCAGGCTACGGCATCCGCGCTG CAGCGGCCGAATACAAGCTGGACTTCATCCCGCTGCTGACCGAAAGATAT TTCCTCGCCTGCCGCACGGACGGGCTCGCCGCCCCCGCGGTCGCCGCTTT CGTCGGGATGCTCCAGGGCGCCGAATTC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig16057:1..978-

>mRNA_P-wetherbeei_contig16057.1.1 ID=mRNA_P-wetherbeei_contig16057.1.1|Name=mRNA_P-wetherbeei_contig16057.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=978bp|location=Sequence derived from alignment at P-wetherbeei_contig16057:1..978- (Phaeothamnion wetherbeei SAG_119_79)
TTGATCAAGGTCCGCCTGCAGTACGACTGGACGCCGGCACCAGGCGAGGC
GCATGTCCTCGACGCAGTGCTGTTCCGCGTGCTGCACGAGATCGCCGACT
GCGGTTCGCTCGCGGAGTCCGCCCGCCGGCTCGGCGTTTCATACCGTCAT
GTCTGGGGCCTGGTCGGCAAATGGGACGGGATCTTCGGCCGGCCGGTGAT
CGAACTGCGCCAGGGCCACGGCGCGCGGCTGACCGAGTTCGGCCGCAAGC
TCCTCTGGTCCGAGGAACTGGTGCAGGCCCGCATCTCGCATGAACTCGAG
AAGGTGCGGCACGAAATCGAGCACGCGCTGGCCGGCGACCAGGGCGAAAT
GCCCCTGGCGATCGCGGCCAGCCACGACCTGGCGCTTGCGGAACTGCGCG
ACCGCCTCGCGCAACGCACGGGCCTAAAGCTCGACATCCGCTTCGAAGGC
AGCCTCGAGAGCCTGGCGGCGCTCGCCGAAGGCCGTCGCACCCTGGCCGG
CTTCCACCTCGCCGAGGGCCTCGACGAAGCGGCGGCCCAGGCCTTCCACC
GGTTCCTCAGGGACGACACCCACACCCTCATTGGCGTCGCGACGCGTACG
CAGGGGCTCATGGTCGCGCCCGGCAACCCCGGGCACATCCTCAGCCTCGC
CGACCTGACGCGACCCGCCGTGCGGATCGTCAACCGGCAGGCCGGTTCGG
GCAGCCGCGTGGAGTTCGACCAGTTGCTGGCCGGCGCCGGCATCGAGCCC
GGGACGCTCGACGGGTACCAGAACGAGGAGTACACCCACCTCGCCGTGGC
CGCGACCGTGGCGGGCGGGCGCGCGGACGCAGGCTACGGCATCCGCGCTG
CAGCGGCCGAATACAAGCTGGACTTCATCCCGCTGCTGACCGAAAGATAT
TTCCTCGCCTGCCGCACGGACGGGCTCGCCGCCCCCGCGGTCGCCGCTTT
CGTCGGGATGCTCCAGGGCGCCGAATTC
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